INFO 2018-12-27 20:04:16,293Z lrauvNc4ToNetcdf.py processResampleNc4File():879 Reading /mbari/LRAUV/whoidhs/missionlogs/2018/20180730_20180730/20180730T190059/201807301900_201807302036.nc4 file...
INFO 2018-12-27 20:04:21,571Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources
INFO 2018-12-27 20:04:21,850Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources
INFO 2018-12-27 20:04:22,129Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources
INFO 2018-12-27 20:04:22,408Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources
INFO 2018-12-27 20:04:22,412Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator
INFO 2018-12-27 20:04:22,688Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator
INFO 2018-12-27 20:04:22,967Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator
INFO 2018-12-27 20:04:23,245Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator
INFO 2018-12-27 20:04:23,323Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen
WARNING 2018-12-27 20:04:23,323Z lrauvNc4ToNetcdf.py processResampleNc4File():961 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180730_20180730/20180730T190059/201807301900_201807302036.nc4
WARNING 2018-12-27 20:04:23,323Z lrauvNc4ToNetcdf.py processResampleNc4File():961 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180730_20180730/20180730T190059/201807301900_201807302036.nc4
WARNING 2018-12-27 20:04:23,323Z lrauvNc4ToNetcdf.py processResampleNc4File():961 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180730_20180730/20180730T190059/201807301900_201807302036.nc4
WARNING 2018-12-27 20:04:23,323Z lrauvNc4ToNetcdf.py processResampleNc4File():961 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180730_20180730/20180730T190059/201807301900_201807302036.nc4
WARNING 2018-12-27 20:04:23,323Z lrauvNc4ToNetcdf.py processResampleNc4File():961 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180730_20180730/20180730T190059/201807301900_201807302036.nc4
WARNING 2018-12-27 20:04:23,324Z lrauvNc4ToNetcdf.py processResampleNc4File():961 'downwelling_photosynthetic_photon_flux_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180730_20180730/20180730T190059/201807301900_201807302036.nc4
INFO 2018-12-27 20:04:23,325Z lrauvNc4ToNetcdf.py processResampleNc4File():922 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping
INFO 2018-12-27 20:04:23,326Z lrauvNc4ToNetcdf.py processResampleNc4File():922 Variable Output470 empty so skipping
INFO 2018-12-27 20:04:23,327Z lrauvNc4ToNetcdf.py processResampleNc4File():922 Variable Output650 empty so skipping
INFO 2018-12-27 20:04:23,339Z lrauvNc4ToNetcdf.py processResampleNc4File():922 Variable platform_battery_charge empty so skipping
INFO 2018-12-27 20:04:23,350Z lrauvNc4ToNetcdf.py processResampleNc4File():922 Variable platform_battery_voltage empty so skipping
INFO 2018-12-27 20:04:23,354Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group NAL9602 parameter time_fix renaming to fix_time
INFO 2018-12-27 20:04:23,358Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude
INFO 2018-12-27 20:04:23,362Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude
WARNING 2018-12-27 20:04:23,362Z lrauvNc4ToNetcdf.py processResampleNc4File():961 'platform_average_current' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180730_20180730/20180730T190059/201807301900_201807302036.nc4
INFO 2018-12-27 20:04:23,386Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position
INFO 2018-12-27 20:04:23,424Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle
INFO 2018-12-27 20:04:23,433Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position
INFO 2018-12-27 20:04:23,478Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle
INFO 2018-12-27 20:04:23,641Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate
INFO 2018-12-27 20:04:23,943Z lrauvNc4ToNetcdf.py createNav():449 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2018-12-27 20:04:24,248Z lrauvNc4ToNetcdf.py createNav():449 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2018-12-27 20:04:24,555Z lrauvNc4ToNetcdf.py createNav():449 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2018-12-27 20:04:24,556Z lrauvNc4ToNetcdf.py nudge_coords():544 /mbari/LRAUV/whoidhs/missionlogs/2018/20180730_20180730/20180730T190059/201807301900_201807302036.nc4
INFO 2018-12-27 20:04:25,055Z lrauvNc4ToNetcdf.py nudge_coords():552 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s)
INFO 2018-12-27 20:04:25,057Z lrauvNc4ToNetcdf.py nudge_coords():568                  -            -            -        61    0.40              -              -
WARNING 2018-12-27 20:04:25,059Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.344712972) < max_sec_diff_at_end (10)
INFO 2018-12-27 20:04:25,061Z lrauvNc4ToNetcdf.py nudge_coords():589    0:        0.345    0.0009962   -0.0001358       729    5.65          -2.79          -4.46
WARNING 2018-12-27 20:04:25,064Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.346818924) < max_sec_diff_at_end (10)
INFO 2018-12-27 20:04:25,065Z lrauvNc4ToNetcdf.py nudge_coords():589    1:        0.347    0.0002874   -0.0001729       313    2.50          -8.02         -12.80
WARNING 2018-12-27 20:04:25,068Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.338438988) < max_sec_diff_at_end (10)
INFO 2018-12-27 20:04:25,069Z lrauvNc4ToNetcdf.py nudge_coords():589    2:        0.338   -0.0012082    0.0031815      1923   12.88          28.70          45.76
WARNING 2018-12-27 20:04:25,072Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.357008934) < max_sec_diff_at_end (10)
INFO 2018-12-27 20:04:25,072Z lrauvNc4ToNetcdf.py nudge_coords():589    3:        0.357    0.0000077    0.0000272       111    0.83           3.80           6.05
WARNING 2018-12-27 20:04:25,075Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.341804982) < max_sec_diff_at_end (10)
INFO 2018-12-27 20:04:25,076Z lrauvNc4ToNetcdf.py nudge_coords():589    4:        0.342   -0.0025824    0.0032441      2393   16.15          23.31          37.22
WARNING 2018-12-27 20:04:25,079Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.338963032) < max_sec_diff_at_end (10)
INFO 2018-12-27 20:04:25,080Z lrauvNc4ToNetcdf.py nudge_coords():589    5:        0.339    0.0001729    0.0000115      1255    8.89           0.15           0.24
WARNING 2018-12-27 20:04:25,083Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.338480949) < max_sec_diff_at_end (10)
INFO 2018-12-27 20:04:25,084Z lrauvNc4ToNetcdf.py nudge_coords():589    6:        0.338   -0.0000039   -0.0000016        25    0.34          -0.56          -0.89
WARNING 2018-12-27 20:04:25,087Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (3.200735092) < max_sec_diff_at_end (10)
INFO 2018-12-27 20:04:25,087Z lrauvNc4ToNetcdf.py nudge_coords():589    7:        3.201    0.0012732    0.0097411      5389   36.03          31.58          50.10
INFO 2018-12-27 20:04:25,091Z lrauvNc4ToNetcdf.py nudge_coords():613    9:            -            -            -      1646   12.15              -              -
INFO 2018-12-27 20:04:25,091Z lrauvNc4ToNetcdf.py nudge_coords():617 Points in final series = 13845
INFO 2018-12-27 20:04:25,123Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():490 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20180730T180059/20180730T213655/data.csv
INFO 2018-12-27 20:04:25,155Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():513 Found 0 position values from the Tracking database
INFO 2018-12-27 20:04:25,158Z lrauvNc4ToNetcdf.py processResampleNc4File():1005 ['fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'oxygen', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time']
INFO 2018-12-27 20:04:25,456Z lrauvNc4ToNetcdf.py processResampleNc4File():1008 Wrote /mbari/LRAUV/whoidhs/missionlogs/2018/20180730_20180730/20180730T190059/201807301900_201807302036_2S_scieng.nc