INFO 2018-12-27 20:04:25,461Z lrauvNc4ToNetcdf.py processResampleNc4File():879 Reading /mbari/LRAUV/whoidhs/missionlogs/2018/20180730_20180730/20180730T203657/201807302037_201807302150.nc4 file...
INFO 2018-12-27 20:04:30,465Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources
INFO 2018-12-27 20:04:30,657Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources
INFO 2018-12-27 20:04:30,848Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources
INFO 2018-12-27 20:04:31,038Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources
INFO 2018-12-27 20:04:31,039Z lrauvNc4ToNetcdf.py processResampleNc4File():922 Variable fix_residual_percent_distance_traveled empty so skipping
INFO 2018-12-27 20:04:31,231Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator
INFO 2018-12-27 20:04:31,424Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator
INFO 2018-12-27 20:04:31,615Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator
INFO 2018-12-27 20:04:31,647Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen
WARNING 2018-12-27 20:04:31,647Z lrauvNc4ToNetcdf.py processResampleNc4File():961 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180730_20180730/20180730T203657/201807302037_201807302150.nc4
WARNING 2018-12-27 20:04:31,647Z lrauvNc4ToNetcdf.py processResampleNc4File():961 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180730_20180730/20180730T203657/201807302037_201807302150.nc4
WARNING 2018-12-27 20:04:31,647Z lrauvNc4ToNetcdf.py processResampleNc4File():961 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180730_20180730/20180730T203657/201807302037_201807302150.nc4
WARNING 2018-12-27 20:04:31,648Z lrauvNc4ToNetcdf.py processResampleNc4File():961 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180730_20180730/20180730T203657/201807302037_201807302150.nc4
WARNING 2018-12-27 20:04:31,648Z lrauvNc4ToNetcdf.py processResampleNc4File():961 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180730_20180730/20180730T203657/201807302037_201807302150.nc4
WARNING 2018-12-27 20:04:31,648Z lrauvNc4ToNetcdf.py processResampleNc4File():961 'downwelling_photosynthetic_photon_flux_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180730_20180730/20180730T203657/201807302037_201807302150.nc4
INFO 2018-12-27 20:04:31,649Z lrauvNc4ToNetcdf.py processResampleNc4File():922 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping
INFO 2018-12-27 20:04:31,650Z lrauvNc4ToNetcdf.py processResampleNc4File():922 Variable Output470 empty so skipping
INFO 2018-12-27 20:04:31,652Z lrauvNc4ToNetcdf.py processResampleNc4File():922 Variable Output650 empty so skipping
INFO 2018-12-27 20:04:31,684Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge
INFO 2018-12-27 20:04:31,715Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage
INFO 2018-12-27 20:04:31,719Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group NAL9602 parameter time_fix renaming to fix_time
INFO 2018-12-27 20:04:31,723Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude
INFO 2018-12-27 20:04:31,727Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude
WARNING 2018-12-27 20:04:31,727Z lrauvNc4ToNetcdf.py processResampleNc4File():961 'platform_average_current' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180730_20180730/20180730T203657/201807302037_201807302150.nc4
INFO 2018-12-27 20:04:31,737Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position
INFO 2018-12-27 20:04:31,745Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle
INFO 2018-12-27 20:04:31,751Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position
INFO 2018-12-27 20:04:31,761Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle
INFO 2018-12-27 20:04:31,781Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate
INFO 2018-12-27 20:04:32,027Z lrauvNc4ToNetcdf.py createNav():449 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2018-12-27 20:04:32,271Z lrauvNc4ToNetcdf.py createNav():449 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2018-12-27 20:04:32,514Z lrauvNc4ToNetcdf.py createNav():449 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2018-12-27 20:04:32,515Z lrauvNc4ToNetcdf.py nudge_coords():544 /mbari/LRAUV/whoidhs/missionlogs/2018/20180730_20180730/20180730T203657/201807302037_201807302150.nc4
INFO 2018-12-27 20:04:32,961Z lrauvNc4ToNetcdf.py nudge_coords():552 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s)
INFO 2018-12-27 20:04:32,962Z lrauvNc4ToNetcdf.py nudge_coords():568                  -            -            -         0    0.00              -              -
WARNING 2018-12-27 20:04:32,963Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.334468126) < max_sec_diff_at_end (10)
INFO 2018-12-27 20:04:32,965Z lrauvNc4ToNetcdf.py nudge_coords():589    0:        0.334   -0.0007691   -0.0039913      3963   28.51         -16.25         -25.94
WARNING 2018-12-27 20:04:32,968Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.345700979) < max_sec_diff_at_end (10)
INFO 2018-12-27 20:04:32,969Z lrauvNc4ToNetcdf.py nudge_coords():589    1:        0.346    0.0004239   -0.0011983      1189    8.64         -16.08         -25.69
WARNING 2018-12-27 20:04:32,972Z lrauvNc4ToNetcdf.py nudge_coords():577 end_sec_diff (0.338478089) < max_sec_diff_at_end (10)
INFO 2018-12-27 20:04:32,973Z lrauvNc4ToNetcdf.py nudge_coords():589    2:        0.338    0.0035710   -0.0031942      3966   27.95         -13.22         -21.18
INFO 2018-12-27 20:04:32,976Z lrauvNc4ToNetcdf.py nudge_coords():613    4:            -            -            -       188    1.40              -              -
INFO 2018-12-27 20:04:32,976Z lrauvNc4ToNetcdf.py nudge_coords():617 Points in final series = 9306
INFO 2018-12-27 20:04:33,015Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():490 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20180730T193707/20180730T225057/data.csv
INFO 2018-12-27 20:04:33,044Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():513 Found 0 position values from the Tracking database
INFO 2018-12-27 20:04:33,047Z lrauvNc4ToNetcdf.py processResampleNc4File():1005 ['fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'oxygen', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time']
INFO 2018-12-27 20:04:33,220Z lrauvNc4ToNetcdf.py processResampleNc4File():1008 Wrote /mbari/LRAUV/whoidhs/missionlogs/2018/20180730_20180730/20180730T203657/201807302037_201807302150_2S_scieng.nc