2018-09-22T19:07:57.370Z,1537643277.370 [CommandLine](IMPORTANT): got command restart logs
2018-09-22T19:08:03.204Z,1537643283.204 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:09:03.370Z,1537643343.370 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:09:59.810Z,1537643399.810 [BPC1](INFO): Calculating totals. Valid battery stick count: 56. Valid reserve battery stick count: 6.
2018-09-22T19:10:03.373Z,1537643403.373 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:10:47.790Z,1537643447.790 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-22T19:10:47.790Z,1537643447.790 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,1809221216212-0.1,   0.0,1448.9,  0
2018-09-22T19:11:03.372Z,1537643463.372 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:12:02.630Z,1537643522.630 [Default:CheckIn:Read_GPS](INFO): Timed out from 2018-09-22T19:07:02.3Z
2018-09-22T19:12:02.630Z,1537643522.630 [Default:CheckIn:Read_GPS] Stopped
2018-09-22T19:12:02.630Z,1537643522.630 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-22T19:12:03.370Z,1537643523.370 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:12:41.948Z,1537643561.948 [NAL9602](INFO): SBD MO Status=2, MOMSN=1116, MT Status=2, MTMSN=0
2018-09-22T19:12:41.948Z,1537643561.948 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-22T19:13:02.914Z,1537643582.914 [NAL9602](IMPORTANT): SBD MO Status=1, MOMSN=1116, MT Status=1, MTMSN=47
2018-09-22T19:13:02.973Z,1537643582.973 [NAL9602](INFO): Sent 64 bytes from file Logs/20180922T042434/Courier0097.lzma
2018-09-22T19:13:02.974Z,1537643582.974 [NAL9602](INFO): Packets left to send: 0
2018-09-22T19:13:02.975Z,1537643582.975 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T042434/Courier0097.lzma.parts/0000.sbd
2018-09-22T19:13:02.976Z,1537643582.976 [NAL9602](DEBUG): Completed sending Logs/20180922T042434/Courier0097.lzma
2018-09-22T19:13:03.706Z,1537643583.706 [NAL9602](INFO): Received command:load Science/sci2.xml;set sci2.MissionTimeout 1 hour;set sci2.NeedCommsTime 30 minute;set sci2.Lat1 36.844 degree;set sci2.Lon1 -121.908 angular_degree;set sci2.YoYoMaxDepth 20 meter;set sci2.MaxDepth 25 meter;run 
2018-09-22T19:13:03.716Z,1537643583.716 [CommandLine](IMPORTANT): got command load ./Missions/Science/sci2.xml
2018-09-22T19:13:03.728Z,1537643583.728 [MissionManager](INFO): Loading Mission: ./Missions/Science/sci2.xml
2018-09-22T19:13:03.844Z,1537643583.844 [MissionManager](INFO): DefineArg sci2.MissionTimeout = 2.000000 h
2018-09-22T19:13:03.847Z,1537643583.847 [MissionManager](INFO): DefineArg sci2.NeedCommsTime = 60.000000 min
2018-09-22T19:13:03.849Z,1537643583.849 [MissionManager](INFO): DefineArg sci2.Repeat = 1.000000 count
2018-09-22T19:13:03.851Z,1537643583.851 [MissionManager](INFO): DefineArg sci2.Lat1 = nan arcdeg
2018-09-22T19:13:03.853Z,1537643583.853 [MissionManager](INFO): DefineArg sci2.Lon1 = nan arcdeg
2018-09-22T19:13:03.855Z,1537643583.855 [MissionManager](INFO): DefineArg sci2.Lat2 = nan arcdeg
2018-09-22T19:13:03.888Z,1537643583.888 [MissionManager](INFO): DefineArg sci2.Lon2 = nan arcdeg
2018-09-22T19:13:03.891Z,1537643583.891 [MissionManager](INFO): DefineArg sci2.Lat3 = nan arcdeg
2018-09-22T19:13:03.893Z,1537643583.893 [MissionManager](INFO): DefineArg sci2.Lon3 = nan arcdeg
2018-09-22T19:13:03.895Z,1537643583.895 [MissionManager](INFO): DefineArg sci2.Lat4 = nan arcdeg
2018-09-22T19:13:03.898Z,1537643583.898 [MissionManager](INFO): DefineArg sci2.Lon4 = nan arcdeg
2018-09-22T19:13:03.900Z,1537643583.900 [MissionManager](INFO): DefineArg sci2.Lat5 = nan arcdeg
2018-09-22T19:13:03.902Z,1537643583.902 [MissionManager](INFO): DefineArg sci2.Lon5 = nan arcdeg
2018-09-22T19:13:03.905Z,1537643583.905 [MissionManager](INFO): DefineArg sci2.Lat6 = nan arcdeg
2018-09-22T19:13:03.920Z,1537643583.920 [MissionManager](INFO): DefineArg sci2.Lon6 = nan arcdeg
2018-09-22T19:13:03.922Z,1537643583.922 [MissionManager](INFO): DefineArg sci2.Lat7 = nan arcdeg
2018-09-22T19:13:03.924Z,1537643583.924 [MissionManager](INFO): DefineArg sci2.Lon7 = nan arcdeg
2018-09-22T19:13:03.935Z,1537643583.935 [MissionManager](INFO): DefineArg sci2.Speed = 1.000000 m/s
2018-09-22T19:13:03.941Z,1537643583.941 [MissionManager](INFO): DefineArg sci2.YoYoMinDepth = 2.000000 m
2018-09-22T19:13:03.944Z,1537643583.944 [MissionManager](INFO): DefineArg sci2.YoYoMaxDepth = 200.000000 m
2018-09-22T19:13:03.950Z,1537643583.950 [MissionManager](INFO): DefineArg sci2.YoYoMinAltitude = 9.000000 m
2018-09-22T19:13:03.952Z,1537643583.952 [MissionManager](INFO): DefineArg sci2.YoYoUpPitch = 20.000000 arcdeg
2018-09-22T19:13:03.955Z,1537643583.955 [MissionManager](INFO): DefineArg sci2.YoYoDownPitch = -20.000000 arcdeg
2018-09-22T19:13:03.970Z,1537643583.970 [MissionManager](INFO): DefineArg sci2.BuoyancyNeutral = 205.000004 cc
2018-09-22T19:13:03.977Z,1537643583.977 [MissionManager](INFO): DefineArg sci2.MassDefault = 0.000000 cm
2018-09-22T19:13:03.979Z,1537643583.979 [MissionManager](INFO): DefineArg sci2.MinAltitude = 5.000000 m
2018-09-22T19:13:03.986Z,1537643583.986 [MissionManager](INFO): DefineArg sci2.MaxDepth = 205.000000 m
2018-09-22T19:13:03.988Z,1537643583.988 [MissionManager](INFO): DefineArg sci2.MinOffshore = 2.000000 km
2018-09-22T19:13:03.989Z,1537643583.989 [MissionManager](INFO): Inserting Stack: Missions/Insert/Science.xml
2018-09-22T19:13:04.189Z,1537643584.189 [MissionManager](INFO): DefineArg sci2:Science.SampleISUS = 0 bool
2018-09-22T19:13:04.191Z,1537643584.191 [MissionManager](INFO): DefineArg sci2:Science.SampleISUSmaxPitch = 60.000000 arcdeg
2018-09-22T19:13:04.193Z,1537643584.193 [MissionManager](INFO): DefineArg sci2:Science.SampleISUSminPitch = -60.000000 arcdeg
2018-09-22T19:13:04.195Z,1537643584.195 [MissionManager](INFO): DefineArg sci2:Science.PeakDetectChlActive = 0 bool
2018-09-22T19:13:04.197Z,1537643584.197 [MissionManager](INFO): DefineArg sci2:Science.HighestChlPeakReportActive = 0 bool
2018-09-22T19:13:04.199Z,1537643584.199 [MissionManager](INFO): DefineArg sci2:Science.PatchTracking = 0 bool
2018-09-22T19:13:04.201Z,1537643584.201 [MissionManager](INFO): DefineArg sci2:Science.FilterWidthHorizontal = 3.000000 count
2018-09-22T19:13:04.203Z,1537643584.203 [MissionManager](INFO): DefineArg sci2:Science.NumProfilesSlidingwindow = 100.000000 count
2018-09-22T19:13:04.205Z,1537643584.205 [MissionManager](INFO): DefineArg sci2:Science.PeakDetectNO3Active = 0 bool
2018-09-22T19:13:04.207Z,1537643584.207 [MissionManager](INFO): DefineArg sci2:Science.PeakDetectOilActive = 0 bool
2018-09-22T19:13:04.208Z,1537643584.208 [MissionManager](INFO): DefineArg sci2:Science.UpwardDerivativeOfTemperatureActive = 0 bool
2018-09-22T19:13:04.211Z,1537643584.211 [MissionManager](INFO): DefineArg sci2:Science.EnabledAanderaaO2 = 0.000000 bool
2018-09-22T19:13:04.215Z,1537643584.215 [MissionManager](INFO): DefineArg sci2:Science.EnabledNeilBrown = 0.000000 bool
2018-09-22T19:13:04.218Z,1537643584.218 [MissionManager](INFO): DefineArg sci2:Science.EnabledSeabird = 0.000000 bool
2018-09-22T19:13:04.220Z,1537643584.220 [MissionManager](INFO): DefineArg sci2:Science.EnabledTurbulence_NPS = 0.000000 bool
2018-09-22T19:13:04.223Z,1537643584.223 [MissionManager](INFO): DefineArg sci2:Science.EnabledWetLabsBB2FL = 0.000000 bool
2018-09-22T19:13:04.263Z,1537643584.263 [MissionManager](INFO): DefineArg sci2:Science.EnabledWetLabsSeaOWL_UV_A = 1.000000 bool
2018-09-22T19:13:04.265Z,1537643584.265 [MissionManager](INFO): DefineArg sci2:Science.EnabledISUS = 0.000000 bool
2018-09-22T19:13:04.267Z,1537643584.267 [MissionManager](INFO): DefineArg sci2:Science.LowPassWindowLength = 20.000000 count
2018-09-22T19:13:04.270Z,1537643584.270 [MissionManager](INFO): DefineArg sci2:Science.PeakChlShallowBound = nan m
2018-09-22T19:13:04.272Z,1537643584.272 [MissionManager](INFO): DefineArg sci2:Science.PeakChlDeepBound = nan m
2018-09-22T19:13:04.289Z,1537643584.289 [MissionManager](INFO): DefineOutput sci2:Science.PeakChl = 0.000000 ug/l
2018-09-22T19:13:04.292Z,1537643584.292 [MissionManager](INFO): DefineOutput sci2:Science.PeakChlDepth = 0.000000 m
2018-09-22T19:13:04.294Z,1537643584.294 [MissionManager](INFO): DefineOutput sci2:Science.PeakChlTemperature = 0.000000 degC
2018-09-22T19:13:04.296Z,1537643584.296 [MissionManager](INFO): DefineOutput sci2:Science.PeakChlLatitude = nan arcdeg
2018-09-22T19:13:04.309Z,1537643584.309 [MissionManager](INFO): DefineOutput sci2:Science.PeakChlLongitude = nan arcdeg
2018-09-22T19:13:04.312Z,1537643584.312 [MissionManager](INFO): DefineOutput sci2:Science.PeakNO3 = 0.000000 umol/l
2018-09-22T19:13:04.314Z,1537643584.314 [MissionManager](INFO): DefineOutput sci2:Science.PeakNO3Depth = 0.000000 m
2018-09-22T19:13:04.316Z,1537643584.316 [MissionManager](INFO): DefineOutput sci2:Science.PeakNO3Latitude = nan arcdeg
2018-09-22T19:13:04.337Z,1537643584.337 [MissionManager](INFO): DefineOutput sci2:Science.PeakNO3Longitude = nan arcdeg
2018-09-22T19:13:04.340Z,1537643584.340 [MissionManager](INFO): DefineOutput sci2:Science.PatchChl = 0.000000 m
2018-09-22T19:13:04.342Z,1537643584.342 [MissionManager](INFO): DefineOutput sci2:Science.PatchChlDepth = 0.000000 m
2018-09-22T19:13:04.344Z,1537643584.344 [MissionManager](INFO): DefineOutput sci2:Science.PatchChlLatitude = nan arcdeg
2018-09-22T19:13:04.370Z,1537643584.370 [MissionManager](INFO): DefineOutput sci2:Science.PatchChlLongitude = nan arcdeg
2018-09-22T19:13:04.376Z,1537643584.376 [MissionManager](INFO): DefineOutput sci2:Science.PatchChlDistance = nan m
2018-09-22T19:13:04.394Z,1537643584.394 [MissionManager](INFO): DefineOutput sci2:Science.PeakOil = 0.000000 kg/m3
2018-09-22T19:13:04.396Z,1537643584.396 [MissionManager](INFO): DefineOutput sci2:Science.PeakOilDepth = 0.000000 m
2018-09-22T19:13:04.399Z,1537643584.399 [MissionManager](INFO): DefineOutput sci2:Science.PeakOilLatitude = nan arcdeg
2018-09-22T19:13:04.416Z,1537643584.416 [MissionManager](INFO): DefineOutput sci2:Science.PeakOilLongitude = nan arcdeg
2018-09-22T19:13:04.444Z,1537643584.444 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-22T19:13:04.464Z,1537643584.464 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-22T19:13:04.489Z,1537643584.489 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-22T19:13:04.513Z,1537643584.513 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-22T19:13:04.541Z,1537643584.541 [MissionManager](INFO): RedefineArg sci2:Science.SampleISUS = value:1 bool
2018-09-22T19:13:04.542Z,1537643584.542 [MissionManager](INFO): RedefineArg sci2:Science.PeakDetectChlActive = value:1 bool
2018-09-22T19:13:04.542Z,1537643584.542 [MissionManager](INFO): Inserting Stack: Missions/Insert/NeedComms.xml
2018-09-22T19:13:04.620Z,1537643584.620 [MissionManager](INFO): DefineArg sci2:NeedComms.DiveInterval = 3.000000 h
2018-09-22T19:13:04.622Z,1537643584.622 [MissionManager](INFO): DefineArg sci2:NeedComms.WaitForPitchUp = 10.000000 min
2018-09-22T19:13:04.624Z,1537643584.624 [MissionManager](INFO): DefineArg sci2:NeedComms.SurfacePitch = 20.000000 arcdeg
2018-09-22T19:13:04.626Z,1537643584.626 [MissionManager](INFO): DefineArg sci2:NeedComms.SurfaceDepthRate = nan m/s
2018-09-22T19:13:04.628Z,1537643584.628 [MissionManager](INFO): DefineArg sci2:NeedComms.SurfaceSpeed = 1.000000 m/s
2018-09-22T19:13:04.630Z,1537643584.630 [MissionManager](INFO): DefineArg sci2:NeedComms.GPSTimeout = 7.000000 min
2018-09-22T19:13:04.633Z,1537643584.633 [MissionManager](INFO): DefineArg sci2:NeedComms.CommsTimeout = 30.000000 min
2018-09-22T19:13:04.638Z,1537643584.638 [sci2:NeedComms:B.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-22T19:13:04.684Z,1537643584.684 [MissionManager](INFO): Inserting Stack: Missions/Insert/StandardEnvelopes.xml
2018-09-22T19:13:04.712Z,1537643584.712 [MissionManager](INFO): DefineArg sci2:StandardEnvelopes.MinAltitude = 5.000000 m
2018-09-22T19:13:04.714Z,1537643584.714 [MissionManager](INFO): DefineArg sci2:StandardEnvelopes.MaxDepth = 200.000000 m
2018-09-22T19:13:04.716Z,1537643584.716 [MissionManager](INFO): DefineArg sci2:StandardEnvelopes.MinOffshore = 2000.000000 m
2018-09-22T19:13:04.717Z,1537643584.717 [sci2:StandardEnvelopes:A.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-22T19:13:04.722Z,1537643584.722 [sci2:StandardEnvelopes:B.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-22T19:13:04.728Z,1537643584.728 [sci2:StandardEnvelopes:C.OffshoreEnvelope](DEBUG): Construct OffshoreEnvelope.
2018-09-22T19:13:04.737Z,1537643584.737 [sci2:I.Pitch](DEBUG): Construct.
2018-09-22T19:13:04.741Z,1537643584.741 [sci2:J.Buoyancy](DEBUG): Construct Buoyancy.
2018-09-22T19:13:04.743Z,1537643584.743 [sci2:K.SetSpeed](DEBUG): Construct.
2018-09-22T19:13:04.745Z,1537643584.745 [sci2:L.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-22T19:13:04.752Z,1537643584.752 [sci2:M.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-22T19:13:04.785Z,1537643584.785 [sci2:N.YoYo](DEBUG): Construct YoYo.
2018-09-22T19:13:04.792Z,1537643584.792 [sci2:Lap:Wpt1:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-22T19:13:04.803Z,1537643584.803 [sci2:Lap:Wpt2:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-22T19:13:04.808Z,1537643584.808 [sci2:Lap:Wpt3:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-22T19:13:04.818Z,1537643584.818 [sci2:Lap:Wpt4:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-22T19:13:04.823Z,1537643584.823 [sci2:Lap:Wpt5:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-22T19:13:04.829Z,1537643584.829 [sci2:Lap:Wpt6:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-22T19:13:04.836Z,1537643584.836 [sci2:Lap:Wpt7:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-22T19:13:04.875Z,1537643584.875 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<!-- ====================
     Generated by TethysL
     ==================== -->
<Mission xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xmlns="Tethys"
         xmlns:Units="Tethys/Units"
         xmlns:Control="Tethys/Control"
         xmlns:Guidance="Tethys/Guidance"
         xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                             Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                             Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                             Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd"
       Id="sci2">

    <Description>
        Vehicle yo-yo's to the specified waypoints, with science turned on.
    </Description>
    <DefineArg Name="MissionTimeout"><Description>
        Maximum duration of mission
    </Description><Units:hour/><Value>2</Value></DefineArg>

    <DefineArg Name="NeedCommsTime"><Description>
        How often to surface for commumications
    </Description><Units:minute/><Value>60</Value></DefineArg>

    <DefineArg Name="Repeat"><Description>
        Number of times the vehicle should try to cycle through waypoints..
    </Description><Units:count/><Value>1</Value></DefineArg>

    <DefineArg Name="Lat1"><Description>
        Latitude of waypoint 1. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon1"><Description>
        Longitude of waypoint 1. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat2"><Description>
        Latitude of waypoint 2. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon2"><Description>
        Longitude of waypoint 2. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat3"><Description>
        Latitude of waypoint 3. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon3"><Description>
        Longitude of waypoint 3. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat4"><Description>
        Latitude of waypoint 4. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon4"><Description>
        Longitude of waypoint 4. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat5"><Description>
        Latitude of waypoint 5. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon5"><Description>
        Longitude of waypoint 5. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat6"><Description>
        Latitude of waypoint 6. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon6"><Description>
        Longitude of waypoint 6. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat7"><Description>
        Latitude of waypoint 7. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon7"><Description>
        Longitude of waypoint 7. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Speed"><Description>
        Speed while performing the YoYo behavior.
    </Description><Units:meter_per_second/><Value>1</Value></DefineArg>

    <DefineArg Name="YoYoMinDepth"><Description>
        Minimum depth while performing the YoYo behavior.
    </Description><Units:meter/><Value>2</Value></DefineArg>

    <DefineArg Name="YoYoMaxDepth"><Description>
        Maximum depth while performing the YoYo behavior.
    </Description><Units:meter/><Value>200</Value></DefineArg>

    <DefineArg Name="YoYoMinAltitude"><Description>
        Minimum altitude while performing the YoYo behavior (for
        bottom-terminated YoYos).
    </Description><Units:meter/><Value>9</Value></DefineArg>

    <DefineArg Name="YoYoUpPitch"><Description>
        Vehicle up pitch while performing the YoYo behavior.
    </Description><Units:degree/><Value>20</Value></DefineArg>

    <DefineArg Name="YoYoDownPitch"><Description>
        Vehicle down pitch while performing the YoYo behavior.
    </Description><Units:degree/><Value>-20</Value></DefineArg>

    <DefineArg Name="BuoyancyNeutral"><Description>
        Buoyancy bladder position while performing the YoYo behavior. Defaults
        to buoyancyNeutral setting in the Config/Control.cfg file. Set to NaN cc
        for active buoyancy
    </Description><Control:VerticalControl.buoyancyNeutral/></DefineArg>

    <DefineArg Name="MassDefault"><Description>
        Static setting for mass during the mission. Set to NaN mm for active
        mass position
    </Description><Control:VerticalControl.massDefault/></DefineArg>

    <DefineArg Name="MinAltitude"><Description>
        Minimum height above the sea floor for the entire mission.
    </Description><Units:meter/><Value>5</Value></DefineArg>

    <DefineArg Name="MaxDepth"><Description>
        Maximum depth for the entire mission.
    </Description><Units:meter/><Value>205</Value></DefineArg>

    <DefineArg Name="MinOffshore"><Description>
        Minimum offshore distance for the entire mission.
    </Description><Units:kilometer/><Value>2</Value></DefineArg>
    <Timeout Duration="MissionTimeout"/>

    <Insert Filename="Insert/Science.xml">
        <Description>
            Most missions will run the science sensors. If you don't place this
            aggregate above NeedComms, science instruments get turned off on the
            last upcast and while floating on the surface.
        </Description>
        <RedefineArg Name="SampleISUS"><True/></RedefineArg>
        <RedefineArg Name="PeakDetectChlActive"><True/></RedefineArg>
    </Insert>

    <Insert Filename="Insert/NeedComms.xml" Id="NeedComms"/>

    <Assign><Sequence/><Arg Name="NeedComms:DiveInterval"/><Arg Name="NeedCommsTime"/></Assign>

    <Insert Filename="Insert/StandardEnvelopes.xml"/>

    <Assign><Sequence/><Arg Name="StandardEnvelopes:MinAltitude"/><Arg Name="MinAltitude"/></Assign>

    <Assign><Sequence/><Arg Name="StandardEnvelopes:MaxDepth"/><Arg Name="MaxDepth"/></Assign>

    <Assign><Sequence/><Arg Name="StandardEnvelopes:MinOffshore"/><Arg Name="MinOffshore"/></Assign>

    <Call Id="StartingMission" RefId="NeedComms"/>

    <Guidance:Pitch>
        <Parallel/>
        <Setting><Guidance:Pitch.massPosition/><Arg Name="MassDefault"/></Setting>
    </Guidance:Pitch>

    <Guidance:Buoyancy>
        <Parallel/>
        <Setting><Guidance:Buoyancy.position/><Arg Name="BuoyancyNeutral"/></Setting>
    </Guidance:Buoyancy>

    <Guidance:SetSpeed>
        <Parallel/>
        <Setting><Guidance:SetSpeed.speed/><Arg Name="Speed"/></Setting>
    </Guidance:SetSpeed>

    <Guidance:DepthEnvelope>
        <Description>
            Another depth envelope for the YoYo behavior. This envelope should
            fall within the limits of the standard safety envelopes in
            Insert/StandardEnvelopes.xml in order to avoid commanding high pitch
            angles for depth-terminated YoYos.
        </Description>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.minDepth/><Arg Name="YoYoMinDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="YoYoMaxDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:DepthEnvelope.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:DepthEnvelope>

    <Guidance:AltitudeEnvelope>
        <Description>
            Another altitude envelope for the YoYo behavior. This envelope
            should fall within the limits of the standard safety envelopes in
            Insert/StandardEnvelopes.xml in order to avoid commanding high pitch
            angles for bottom-terminated YoYos.
        </Description>
        <Parallel/>
        <Setting><Guidance:AltitudeEnvelope.minAltitude/><Arg Name="YoYoMinAltitude"/></Setting>
        <Setting><Guidance:AltitudeEnvelope.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:AltitudeEnvelope>

    <Guidance:YoYo>
        <Parallel/>
        <Setting><Guidance:YoYo.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:YoYo.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:YoYo>

    <Aggregate Id="Lap">
        <Sequence Repeat="Repeat"/>

        <Aggregate Id="Wpt1">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat1"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon1"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt2">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat2"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon2"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt3">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat3"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon3"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt4">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat4"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon4"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt5">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat5"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon5"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt6">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat6"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon6"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt7">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat7"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon7"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>
    </Aggregate>
</Mission>

2018-09-22T19:13:04.876Z,1537643584.876 [CommandLine](IMPORTANT): Loaded ./Missions/Science/sci2.xml
2018-09-22T19:13:12.304Z,1537643592.304 [CommandLine](IMPORTANT): got command set sci2.MissionTimeout 1.000000 hour
2018-09-22T19:13:12.305Z,1537643592.305 [CommandLine](IMPORTANT): got command set sci2.NeedCommsTime 30.000000 minute
2018-09-22T19:13:12.306Z,1537643592.306 [CommandLine](IMPORTANT): got command set sci2.Lat1 36.844002 degree
2018-09-22T19:13:12.306Z,1537643592.306 [CommandLine](IMPORTANT): got command set sci2.Lon1 -121.907997 angular_degree
2018-09-22T19:13:12.307Z,1537643592.307 [CommandLine](IMPORTANT): got command set sci2.YoYoMaxDepth 20.000000 meter
2018-09-22T19:13:12.308Z,1537643592.308 [CommandLine](IMPORTANT): got command set sci2.MaxDepth 25.000000 meter
2018-09-22T19:13:12.309Z,1537643592.309 [CommandLine](IMPORTANT): got command run 
2018-09-22T19:13:12.311Z,1537643592.311 [CommandLine](IMPORTANT): Running 
2018-09-22T19:13:12.500Z,1537643592.500 [Default] Stopped
2018-09-22T19:13:12.500Z,1537643592.500 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-22T19:13:12.500Z,1537643592.500 [Default:B.GoToSurface] Stopped
2018-09-22T19:13:12.500Z,1537643592.500 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-22T19:13:12.500Z,1537643592.500 [Default:CheckIn] Stopped
2018-09-22T19:13:12.500Z,1537643592.500 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-22T19:13:12.500Z,1537643592.500 [Default:CheckIn:Read_Iridium] Stopped
2018-09-22T19:13:12.500Z,1537643592.500 [MissionManager](IMPORTANT): Started mission sci2
2018-09-22T19:13:12.501Z,1537643592.501 [sci2] Running Loop=1
2018-09-22T19:13:12.501Z,1537643592.501 [sci2](DEBUG): Aggregate::initialize sci2
2018-09-22T19:13:12.501Z,1537643592.501 [sci2:Science] Running Loop=1
2018-09-22T19:13:12.501Z,1537643592.501 [sci2:Science](DEBUG): Aggregate::initialize sci2:Science
2018-09-22T19:13:12.501Z,1537643592.501 [sci2:Science:A] Running Loop=1
2018-09-22T19:13:12.502Z,1537643592.502 [sci2:Science:B] Running Loop=1
2018-09-22T19:13:12.502Z,1537643592.502 [sci2:Science:C] Running Loop=1
2018-09-22T19:13:12.502Z,1537643592.502 [sci2:Science:D] Running Loop=1
2018-09-22T19:13:12.502Z,1537643592.502 [sci2:Science:E] Running Loop=1
2018-09-22T19:13:12.502Z,1537643592.502 [sci2:Science:F] Running Loop=1
2018-09-22T19:13:12.502Z,1537643592.502 [sci2:Science:G] Running Loop=1
2018-09-22T19:13:12.502Z,1537643592.502 [sci2:Science:Read_Oil] Running Loop=1
2018-09-22T19:13:12.502Z,1537643592.502 [sci2:Science:PeakDetectChl] Running Loop=1
2018-09-22T19:13:12.502Z,1537643592.502 [sci2:Science:PeakDetectChl](DEBUG): Aggregate::initialize sci2:Science:PeakDetectChl
2018-09-22T19:13:12.502Z,1537643592.502 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2018-09-22T19:13:12.502Z,1537643592.502 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-22T19:13:12.504Z,1537643592.504 [sci2:Science:HighestChlPeakReport] Running Loop=1
2018-09-22T19:13:12.504Z,1537643592.504 [sci2:Science:HighestChlPeakReport](DEBUG): Aggregate::initialize sci2:Science:HighestChlPeakReport
2018-09-22T19:13:12.504Z,1537643592.504 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2018-09-22T19:13:12.504Z,1537643592.504 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2018-09-22T19:13:12.504Z,1537643592.504 [sci2:Science:PeakDetectNO3] Running Loop=1
2018-09-22T19:13:12.505Z,1537643592.505 [sci2:Science:PeakDetectNO3](DEBUG): Aggregate::initialize sci2:Science:PeakDetectNO3
2018-09-22T19:13:12.505Z,1537643592.505 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2018-09-22T19:13:12.505Z,1537643592.505 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-22T19:13:12.506Z,1537643592.506 [sci2:Science:PeakDetectOil] Running Loop=1
2018-09-22T19:13:12.506Z,1537643592.506 [sci2:Science:PeakDetectOil](DEBUG): Aggregate::initialize sci2:Science:PeakDetectOil
2018-09-22T19:13:12.506Z,1537643592.506 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2018-09-22T19:13:12.506Z,1537643592.506 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-22T19:13:12.507Z,1537643592.507 [sci2:StandardEnvelopes] Running Loop=1
2018-09-22T19:13:12.507Z,1537643592.507 [sci2:StandardEnvelopes](DEBUG): Aggregate::initialize sci2:StandardEnvelopes
2018-09-22T19:13:12.508Z,1537643592.508 [sci2:StandardEnvelopes:A.AltitudeEnvelope] Running Loop=1
2018-09-22T19:13:12.508Z,1537643592.508 [sci2:StandardEnvelopes:A.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-22T19:13:12.508Z,1537643592.508 [sci2:StandardEnvelopes:B.DepthEnvelope] Running Loop=1
2018-09-22T19:13:12.508Z,1537643592.508 [sci2:StandardEnvelopes:B.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-22T19:13:12.508Z,1537643592.508 [sci2:StandardEnvelopes:C.OffshoreEnvelope] Running Loop=1
2018-09-22T19:13:12.508Z,1537643592.508 [sci2:StandardEnvelopes:C.OffshoreEnvelope](DEBUG): Initialize OffshoreEnvelopeComponent.
2018-09-22T19:13:12.508Z,1537643592.508 [sci2:I.Pitch] Running Loop=1
2018-09-22T19:13:12.508Z,1537643592.508 [sci2:I.Pitch](DEBUG): Initialize.
2018-09-22T19:13:12.509Z,1537643592.509 [sci2:J.Buoyancy] Running Loop=1
2018-09-22T19:13:12.509Z,1537643592.509 [sci2:J.Buoyancy](DEBUG): Initialize Buoyancy Component.
2018-09-22T19:13:12.509Z,1537643592.509 [sci2:K.SetSpeed] Running Loop=1
2018-09-22T19:13:12.509Z,1537643592.509 [sci2:K.SetSpeed](DEBUG): Initialize.
2018-09-22T19:13:12.509Z,1537643592.509 [sci2:L.DepthEnvelope] Running Loop=1
2018-09-22T19:13:12.509Z,1537643592.509 [sci2:L.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-22T19:13:12.510Z,1537643592.510 [sci2:M.AltitudeEnvelope] Running Loop=1
2018-09-22T19:13:12.510Z,1537643592.510 [sci2:M.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-22T19:13:12.510Z,1537643592.510 [sci2:N.YoYo] Running Loop=1
2018-09-22T19:13:12.510Z,1537643592.510 [sci2:N.YoYo](DEBUG): Initialize YoYoComponent.
2018-09-22T19:13:12.510Z,1537643592.510 [sci2:C] Running Loop=1
2018-09-22T19:13:12.511Z,1537643592.511 [sci2:N.YoYo] Running Loop=1
2018-09-22T19:13:12.512Z,1537643592.512 [sci2:M.AltitudeEnvelope] Running Loop=1
2018-09-22T19:13:12.514Z,1537643592.514 [sci2:L.DepthEnvelope] Running Loop=1
2018-09-22T19:13:12.515Z,1537643592.515 [sci2:K.SetSpeed] Running Loop=1
2018-09-22T19:13:12.516Z,1537643592.516 [sci2:J.Buoyancy] Running Loop=1
2018-09-22T19:13:12.518Z,1537643592.518 [sci2:I.Pitch] Running Loop=1
2018-09-22T19:13:12.519Z,1537643592.519 [sci2:StandardEnvelopes] Running Loop=1
2018-09-22T19:13:12.519Z,1537643592.519 [sci2:StandardEnvelopes:C.OffshoreEnvelope] Running Loop=1
2018-09-22T19:13:12.520Z,1537643592.520 [sci2:StandardEnvelopes:B.DepthEnvelope] Running Loop=1
2018-09-22T19:13:12.521Z,1537643592.521 [sci2:StandardEnvelopes:A.AltitudeEnvelope] Running Loop=1
2018-09-22T19:13:12.523Z,1537643592.523 [sci2:C] Stopped
2018-09-22T19:13:12.523Z,1537643592.523 [sci2:E] Running Loop=1
2018-09-22T19:13:12.523Z,1537643592.523 [sci2:Science] Running Loop=1
2018-09-22T19:13:12.526Z,1537643592.526 [sci2:Science:PeakDetectOil] Stopped
2018-09-22T19:13:12.527Z,1537643592.527 [sci2:Science:PeakDetectOil](DEBUG): Aggregate::uninitialize sci2:Science:PeakDetectOil
2018-09-22T19:13:12.527Z,1537643592.527 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2018-09-22T19:13:12.527Z,1537643592.527 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-22T19:13:12.527Z,1537643592.527 [sci2:Science:PeakDetectNO3] Stopped
2018-09-22T19:13:12.527Z,1537643592.527 [sci2:Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize sci2:Science:PeakDetectNO3
2018-09-22T19:13:12.527Z,1537643592.527 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2018-09-22T19:13:12.527Z,1537643592.527 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-22T19:13:12.527Z,1537643592.527 [sci2:Science:HighestChlPeakReport] Stopped
2018-09-22T19:13:12.527Z,1537643592.527 [sci2:Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize sci2:Science:HighestChlPeakReport
2018-09-22T19:13:12.527Z,1537643592.527 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2018-09-22T19:13:12.527Z,1537643592.527 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-22T19:13:12.528Z,1537643592.528 [sci2:Science:PeakDetectChl] Running Loop=1
2018-09-22T19:13:12.528Z,1537643592.528 [sci2:Science:Read_Oil] Running Loop=1
2018-09-22T19:13:12.529Z,1537643592.529 [sci2:Science:Read_Oil](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-22T19:13:12.530Z,1537643592.530 [sci2:Science:G] Running Loop=1
2018-09-22T19:13:12.531Z,1537643592.531 [sci2:Science:G](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-22T19:13:12.531Z,1537643592.531 [sci2:Science:F] Stopped
2018-09-22T19:13:12.532Z,1537643592.532 [sci2:Science:E] Stopped
2018-09-22T19:13:12.532Z,1537643592.532 [sci2:Science:D] Stopped
2018-09-22T19:13:12.532Z,1537643592.532 [sci2:Science:C] Stopped
2018-09-22T19:13:12.532Z,1537643592.532 [sci2:Science:B] Stopped
2018-09-22T19:13:12.532Z,1537643592.532 [sci2:Science:A] Stopped
2018-09-22T19:13:12.675Z,1537643592.675 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:13:12.719Z,1537643592.719 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-22T19:13:12.719Z,1537643592.719 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-22T19:13:12.740Z,1537643592.740 [sci2:E] Stopped
2018-09-22T19:13:12.741Z,1537643592.741 [sci2:F] Running Loop=1
2018-09-22T19:13:12.746Z,1537643592.746 [sci2:NeedComms] Running Loop=1
2018-09-22T19:13:12.746Z,1537643592.746 [sci2:NeedComms](DEBUG): Aggregate::initialize sci2:NeedComms
2018-09-22T19:13:12.747Z,1537643592.747 [sci2:NeedComms:B.GoToSurface] Running Loop=1
2018-09-22T19:13:12.747Z,1537643592.747 [sci2:NeedComms:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-22T19:13:12.747Z,1537643592.747 [sci2:NeedComms:B.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-22T19:13:12.748Z,1537643592.748 [sci2:NeedComms:B.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-22T19:13:12.748Z,1537643592.748 [sci2:NeedComms:B.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-22T19:13:12.748Z,1537643592.748 [sci2:NeedComms:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-22T19:13:12.753Z,1537643592.753 [sci2:NeedComms:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-22T19:13:12.753Z,1537643592.753 [sci2:NeedComms:A] Running Loop=1
2018-09-22T19:13:12.755Z,1537643592.755 [sci2:NeedComms:A](INFO): last time_fix was: 1537641749.000000 second since 1970/01/01T00:00:00Z 
2018-09-22T19:13:12.756Z,1537643592.756 [sci2:NeedComms:A] Stopped
2018-09-22T19:13:13.112Z,1537643593.112 [sci2:F] Stopped
2018-09-22T19:13:13.113Z,1537643593.113 [sci2:G] Running Loop=1
2018-09-22T19:13:13.115Z,1537643593.115 [sci2:NeedComms:C] Running Loop=1
2018-09-22T19:13:13.457Z,1537643593.457 [ThrusterServo](ERROR): Thruster uart error: serial timeout
2018-09-22T19:13:13.457Z,1537643593.457 [ThrusterServo] Communications Fault, FailCount= 1
2018-09-22T19:13:13.457Z,1537643593.457 [ThrusterServo](ERROR): Communications Fault
2018-09-22T19:13:13.461Z,1537643593.461 [CBIT](ERROR): Communications Fault in component: ThrusterServo
2018-09-22T19:13:13.564Z,1537643593.564 [sci2:G] Stopped
2018-09-22T19:13:13.564Z,1537643593.564 [sci2:StartingMission] Running Loop=1
2018-09-22T19:13:13.565Z,1537643593.565 [sci2:StartingMission](DEBUG): Aggregate::initialize sci2:StartingMission
2018-09-22T19:13:13.567Z,1537643593.567 [sci2:NeedComms:C](DEBUG): Initialize ReadDataComponent to sense time_fix
2018-09-22T19:13:13.667Z,1537643593.667 [ThrusterServo](DEBUG): Uninitialize Thruster Servo.
2018-09-22T19:13:13.667Z,1537643593.667 [ThrusterServo](INFO): Powering down
2018-09-22T19:13:13.979Z,1537643593.979 [ThrusterServo](FAULT): LCB fault: LCB Watchdog Reset. Invalid Command. Hardware Overcurrent Shutdown. Software Overcurrent. Current Limiter Activated.
2018-09-22T19:13:13.979Z,1537643593.979 [ThrusterServo] Hardware Fault, FailCount= 1
2018-09-22T19:13:13.979Z,1537643593.979 [ThrusterServo](ERROR): Hardware Fault
2018-09-22T19:13:14.517Z,1537643594.517 [CBIT](INFO): Clearing failed state for component ThrusterServo
2018-09-22T19:13:14.517Z,1537643594.517 [ThrusterServo] No Fault, FailCount= 1
2018-09-22T19:13:14.787Z,1537643594.787 [ThrusterServo](DEBUG): Initializing EZServoServo.
2018-09-22T19:13:14.788Z,1537643594.788 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2018-09-22T19:13:15.086Z,1537643595.086 [NAL9602](INFO): GPS fix at 20180922T191303: (36.833027, -121.899388)
2018-09-22T19:13:15.136Z,1537643595.136 [UniversalFixResidualReporter](INFO): Fix residual: 15.7 %DT, over the last 1375.5 m. Residual distance 215.3 m at bearing 41.8 degrees. Fix at (36.8330, -121.8994) with 1128.0 m made good.
2018-09-22T19:13:15.149Z,1537643595.149 [sci2:NeedComms:C] Stopped
2018-09-22T19:13:15.149Z,1537643595.149 [sci2:NeedComms:D] Running Loop=1
2018-09-22T19:13:15.574Z,1537643595.574 [sci2:NeedComms:D](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-22T19:13:38.146Z,1537643618.146 [NAL9602](IMPORTANT): SBD MO Status=1, MOMSN=1117, MT Status=1, MTMSN=48
2018-09-22T19:13:38.197Z,1537643618.197 [NAL9602](INFO): Sent 190 bytes from file Logs/20180922T190757/Courier0000.lzma
2018-09-22T19:13:38.197Z,1537643618.197 [NAL9602](INFO): Packets left to send: 0
2018-09-22T19:13:38.199Z,1537643618.199 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Courier0000.lzma.parts/0000.sbd
2018-09-22T19:13:38.199Z,1537643618.199 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Courier0000.lzma
2018-09-22T19:13:38.709Z,1537643618.709 [NAL9602](INFO): Received command:stop
2018-09-22T19:13:38.741Z,1537643618.741 [CommandLine](IMPORTANT): got command stop
2018-09-22T19:13:38.741Z,1537643618.741 [Supervisor](INFO): Stop Mission called by CommandLine::commandStop
2018-09-22T19:13:38.767Z,1537643618.767 [MissionManager](INFO): MissionManager is completed.
2018-09-22T19:13:38.767Z,1537643618.767 [MissionManager](INFO): Uninitializing Mission sci2
2018-09-22T19:13:38.768Z,1537643618.768 [sci2] Stopped
2018-09-22T19:13:38.768Z,1537643618.768 [sci2](DEBUG): Aggregate::uninitialize sci2
2018-09-22T19:13:38.768Z,1537643618.768 [sci2:Science] Stopped
2018-09-22T19:13:38.768Z,1537643618.768 [sci2:Science](DEBUG): Aggregate::uninitialize sci2:Science
2018-09-22T19:13:38.768Z,1537643618.768 [sci2:Science:G] Stopped
2018-09-22T19:13:38.768Z,1537643618.768 [sci2:Science:Read_Oil] Stopped
2018-09-22T19:13:38.768Z,1537643618.768 [sci2:Science:PeakDetectChl] Stopped
2018-09-22T19:13:38.768Z,1537643618.768 [sci2:Science:PeakDetectChl](DEBUG): Aggregate::uninitialize sci2:Science:PeakDetectChl
2018-09-22T19:13:38.768Z,1537643618.768 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2018-09-22T19:13:38.768Z,1537643618.768 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-22T19:13:38.769Z,1537643618.769 [sci2:NeedComms] Stopped
2018-09-22T19:13:38.769Z,1537643618.769 [sci2:NeedComms](DEBUG): Aggregate::uninitialize sci2:NeedComms
2018-09-22T19:13:38.769Z,1537643618.769 [sci2:NeedComms:B.GoToSurface] Stopped
2018-09-22T19:13:38.769Z,1537643618.769 [sci2:NeedComms:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-22T19:13:38.769Z,1537643618.769 [sci2:NeedComms:D] Stopped
2018-09-22T19:13:38.769Z,1537643618.769 [sci2:StandardEnvelopes] Stopped
2018-09-22T19:13:38.769Z,1537643618.769 [sci2:StandardEnvelopes](DEBUG): Aggregate::uninitialize sci2:StandardEnvelopes
2018-09-22T19:13:38.769Z,1537643618.769 [sci2:StandardEnvelopes:A.AltitudeEnvelope] Stopped
2018-09-22T19:13:38.770Z,1537643618.770 [sci2:StandardEnvelopes:A.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-22T19:13:38.770Z,1537643618.770 [sci2:StandardEnvelopes:B.DepthEnvelope] Stopped
2018-09-22T19:13:38.770Z,1537643618.770 [sci2:StandardEnvelopes:B.DepthEnvelope](DEBUG): Uninitialize.
2018-09-22T19:13:38.770Z,1537643618.770 [sci2:StandardEnvelopes:C.OffshoreEnvelope] Stopped
2018-09-22T19:13:38.770Z,1537643618.770 [sci2:StandardEnvelopes:C.OffshoreEnvelope](DEBUG): Uninitialize OffshoreEnvelopeComponent.
2018-09-22T19:13:38.770Z,1537643618.770 [sci2:StartingMission] Stopped
2018-09-22T19:13:38.770Z,1537643618.770 [sci2:StartingMission](DEBUG): Aggregate::uninitialize sci2:StartingMission
2018-09-22T19:13:38.770Z,1537643618.770 [sci2:I.Pitch] Stopped
2018-09-22T19:13:38.770Z,1537643618.770 [sci2:J.Buoyancy] Stopped
2018-09-22T19:13:38.770Z,1537643618.770 [sci2:J.Buoyancy](DEBUG): Uninitialize Buoyancy Component.
2018-09-22T19:13:38.770Z,1537643618.770 [sci2:K.SetSpeed] Stopped
2018-09-22T19:13:38.771Z,1537643618.771 [sci2:K.SetSpeed](DEBUG): Uninitialize.
2018-09-22T19:13:38.771Z,1537643618.771 [sci2:L.DepthEnvelope] Stopped
2018-09-22T19:13:38.771Z,1537643618.771 [sci2:L.DepthEnvelope](DEBUG): Uninitialize.
2018-09-22T19:13:38.771Z,1537643618.771 [sci2:M.AltitudeEnvelope] Stopped
2018-09-22T19:13:38.771Z,1537643618.771 [sci2:M.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-22T19:13:38.771Z,1537643618.771 [sci2:N.YoYo] Stopped
2018-09-22T19:13:38.771Z,1537643618.771 [sci2:N.YoYo](DEBUG): Uninitialize YoYoComponent.
2018-09-22T19:13:38.996Z,1537643618.996 [MissionManager](IMPORTANT): Started mission Default
2018-09-22T19:13:38.996Z,1537643618.996 [Default] Running Loop=1
2018-09-22T19:13:38.996Z,1537643618.996 [Default](DEBUG): Aggregate::initialize Default
2018-09-22T19:13:38.996Z,1537643618.996 [Default:B.GoToSurface] Running Loop=1
2018-09-22T19:13:38.996Z,1537643618.996 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-22T19:13:38.997Z,1537643618.997 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-22T19:13:38.997Z,1537643618.997 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-22T19:13:38.998Z,1537643618.998 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-22T19:13:38.998Z,1537643618.998 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-22T19:13:38.998Z,1537643618.998 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-22T19:13:38.999Z,1537643618.999 [Default:A.Wait] Running Loop=1
2018-09-22T19:13:38.999Z,1537643618.999 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-22T19:13:39.161Z,1537643619.161 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-22T19:13:52.216Z,1537643632.216 [Default:A.Wait](INFO): Done Waiting.
2018-09-22T19:13:52.216Z,1537643632.216 [Default:A.Wait] Stopped
2018-09-22T19:13:52.216Z,1537643632.216 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-22T19:13:52.584Z,1537643632.584 [Default:CheckIn] Running Loop=1
2018-09-22T19:13:52.584Z,1537643632.584 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-22T19:13:52.584Z,1537643632.584 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-22T19:13:54.531Z,1537643634.531 [NAL9602](INFO): GPS fix at 20180922T191343: (36.832988, -121.899405)
2018-09-22T19:13:54.604Z,1537643634.604 [Default:CheckIn:Read_GPS] Stopped
2018-09-22T19:13:54.604Z,1537643634.604 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-22T19:14:05.579Z,1537643645.579 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:14:17.960Z,1537643657.960 [NAL9602](IMPORTANT): SBD MO Status=1, MOMSN=1118, MT Status=1, MTMSN=49
2018-09-22T19:14:18.013Z,1537643658.013 [NAL9602](INFO): Sent 278 bytes from file Logs/20180922T190757/Courier0003.lzma
2018-09-22T19:14:18.013Z,1537643658.013 [NAL9602](INFO): Packets left to send: 0
2018-09-22T19:14:18.015Z,1537643658.015 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Courier0003.lzma.parts/0000.sbd
2018-09-22T19:14:18.015Z,1537643658.015 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Courier0003.lzma
2018-09-22T19:14:18.878Z,1537643658.878 [NAL9602](INFO): Received command:load Science/sci2.xml;set sci2.MissionTimeout 1 hour;set sci2.NeedCommsTime 30 minute;set sci2.Lat1 36.844 degree;set sci2.Lon1 -121.888 angular_degree;set sci2.YoYoMaxDepth 20 meter;set sci2.MaxDepth 25 meter;run 
2018-09-22T19:14:18.888Z,1537643658.888 [CommandLine](IMPORTANT): got command load ./Missions/Science/sci2.xml
2018-09-22T19:14:18.900Z,1537643658.900 [MissionManager](INFO): Loading Mission: ./Missions/Science/sci2.xml
2018-09-22T19:14:19.026Z,1537643659.026 [MissionManager](INFO): DefineArg sci2.MissionTimeout = 2.000000 h
2018-09-22T19:14:19.028Z,1537643659.028 [MissionManager](INFO): DefineArg sci2.NeedCommsTime = 60.000000 min
2018-09-22T19:14:19.030Z,1537643659.030 [MissionManager](INFO): DefineArg sci2.Repeat = 1.000000 count
2018-09-22T19:14:19.032Z,1537643659.032 [MissionManager](INFO): DefineArg sci2.Lat1 = nan arcdeg
2018-09-22T19:14:19.035Z,1537643659.035 [MissionManager](INFO): DefineArg sci2.Lon1 = nan arcdeg
2018-09-22T19:14:19.037Z,1537643659.037 [MissionManager](INFO): DefineArg sci2.Lat2 = nan arcdeg
2018-09-22T19:14:19.039Z,1537643659.039 [MissionManager](INFO): DefineArg sci2.Lon2 = nan arcdeg
2018-09-22T19:14:19.070Z,1537643659.070 [MissionManager](INFO): DefineArg sci2.Lat3 = nan arcdeg
2018-09-22T19:14:19.072Z,1537643659.072 [MissionManager](INFO): DefineArg sci2.Lon3 = nan arcdeg
2018-09-22T19:14:19.076Z,1537643659.076 [MissionManager](INFO): DefineArg sci2.Lat4 = nan arcdeg
2018-09-22T19:14:19.090Z,1537643659.090 [MissionManager](INFO): DefineArg sci2.Lon4 = nan arcdeg
2018-09-22T19:14:19.093Z,1537643659.093 [MissionManager](INFO): DefineArg sci2.Lat5 = nan arcdeg
2018-09-22T19:14:19.110Z,1537643659.110 [MissionManager](INFO): DefineArg sci2.Lon5 = nan arcdeg
2018-09-22T19:14:19.112Z,1537643659.112 [MissionManager](INFO): DefineArg sci2.Lat6 = nan arcdeg
2018-09-22T19:14:19.119Z,1537643659.119 [MissionManager](INFO): DefineArg sci2.Lon6 = nan arcdeg
2018-09-22T19:14:19.129Z,1537643659.129 [MissionManager](INFO): DefineArg sci2.Lat7 = nan arcdeg
2018-09-22T19:14:19.131Z,1537643659.131 [MissionManager](INFO): DefineArg sci2.Lon7 = nan arcdeg
2018-09-22T19:14:19.136Z,1537643659.136 [MissionManager](INFO): DefineArg sci2.Speed = 1.000000 m/s
2018-09-22T19:14:19.158Z,1537643659.158 [MissionManager](INFO): DefineArg sci2.YoYoMinDepth = 2.000000 m
2018-09-22T19:14:19.160Z,1537643659.160 [MissionManager](INFO): DefineArg sci2.YoYoMaxDepth = 200.000000 m
2018-09-22T19:14:19.166Z,1537643659.166 [MissionManager](INFO): DefineArg sci2.YoYoMinAltitude = 9.000000 m
2018-09-22T19:14:19.173Z,1537643659.173 [MissionManager](INFO): DefineArg sci2.YoYoUpPitch = 20.000000 arcdeg
2018-09-22T19:14:19.175Z,1537643659.175 [MissionManager](INFO): DefineArg sci2.YoYoDownPitch = -20.000000 arcdeg
2018-09-22T19:14:19.179Z,1537643659.179 [MissionManager](INFO): DefineArg sci2.BuoyancyNeutral = 205.000004 cc
2018-09-22T19:14:19.189Z,1537643659.189 [MissionManager](INFO): DefineArg sci2.MassDefault = 0.000000 cm
2018-09-22T19:14:19.192Z,1537643659.192 [MissionManager](INFO): DefineArg sci2.MinAltitude = 5.000000 m
2018-09-22T19:14:19.198Z,1537643659.198 [MissionManager](INFO): DefineArg sci2.MaxDepth = 205.000000 m
2018-09-22T19:14:19.200Z,1537643659.200 [MissionManager](INFO): DefineArg sci2.MinOffshore = 2.000000 km
2018-09-22T19:14:19.205Z,1537643659.205 [MissionManager](INFO): Inserting Stack: Missions/Insert/Science.xml
2018-09-22T19:14:19.368Z,1537643659.368 [MissionManager](INFO): DefineArg sci2:Science.SampleISUS = 0 bool
2018-09-22T19:14:19.376Z,1537643659.376 [MissionManager](INFO): DefineArg sci2:Science.SampleISUSmaxPitch = 60.000000 arcdeg
2018-09-22T19:14:19.378Z,1537643659.378 [MissionManager](INFO): DefineArg sci2:Science.SampleISUSminPitch = -60.000000 arcdeg
2018-09-22T19:14:19.380Z,1537643659.380 [MissionManager](INFO): DefineArg sci2:Science.PeakDetectChlActive = 0 bool
2018-09-22T19:14:19.382Z,1537643659.382 [MissionManager](INFO): DefineArg sci2:Science.HighestChlPeakReportActive = 0 bool
2018-09-22T19:14:19.384Z,1537643659.384 [MissionManager](INFO): DefineArg sci2:Science.PatchTracking = 0 bool
2018-09-22T19:14:19.386Z,1537643659.386 [MissionManager](INFO): DefineArg sci2:Science.FilterWidthHorizontal = 3.000000 count
2018-09-22T19:14:19.388Z,1537643659.388 [MissionManager](INFO): DefineArg sci2:Science.NumProfilesSlidingwindow = 100.000000 count
2018-09-22T19:14:19.390Z,1537643659.390 [MissionManager](INFO): DefineArg sci2:Science.PeakDetectNO3Active = 0 bool
2018-09-22T19:14:19.392Z,1537643659.392 [MissionManager](INFO): DefineArg sci2:Science.PeakDetectOilActive = 0 bool
2018-09-22T19:14:19.394Z,1537643659.394 [MissionManager](INFO): DefineArg sci2:Science.UpwardDerivativeOfTemperatureActive = 0 bool
2018-09-22T19:14:19.396Z,1537643659.396 [MissionManager](INFO): DefineArg sci2:Science.EnabledAanderaaO2 = 0.000000 bool
2018-09-22T19:14:19.399Z,1537643659.399 [MissionManager](INFO): DefineArg sci2:Science.EnabledNeilBrown = 0.000000 bool
2018-09-22T19:14:19.401Z,1537643659.401 [MissionManager](INFO): DefineArg sci2:Science.EnabledSeabird = 0.000000 bool
2018-09-22T19:14:19.404Z,1537643659.404 [MissionManager](INFO): DefineArg sci2:Science.EnabledTurbulence_NPS = 0.000000 bool
2018-09-22T19:14:19.406Z,1537643659.406 [MissionManager](INFO): DefineArg sci2:Science.EnabledWetLabsBB2FL = 0.000000 bool
2018-09-22T19:14:19.412Z,1537643659.412 [MissionManager](INFO): DefineArg sci2:Science.EnabledWetLabsSeaOWL_UV_A = 1.000000 bool
2018-09-22T19:14:19.456Z,1537643659.456 [MissionManager](INFO): DefineArg sci2:Science.EnabledISUS = 0.000000 bool
2018-09-22T19:14:19.458Z,1537643659.458 [MissionManager](INFO): DefineArg sci2:Science.LowPassWindowLength = 20.000000 count
2018-09-22T19:14:19.460Z,1537643659.460 [MissionManager](INFO): DefineArg sci2:Science.PeakChlShallowBound = nan m
2018-09-22T19:14:19.462Z,1537643659.462 [MissionManager](INFO): DefineArg sci2:Science.PeakChlDeepBound = nan m
2018-09-22T19:14:19.464Z,1537643659.464 [MissionManager](INFO): DefineOutput sci2:Science.PeakChl = 0.000000 ug/l
2018-09-22T19:14:19.475Z,1537643659.475 [MissionManager](INFO): DefineOutput sci2:Science.PeakChlDepth = 0.000000 m
2018-09-22T19:14:19.478Z,1537643659.478 [MissionManager](INFO): DefineOutput sci2:Science.PeakChlTemperature = 0.000000 degC
2018-09-22T19:14:19.480Z,1537643659.480 [MissionManager](INFO): DefineOutput sci2:Science.PeakChlLatitude = nan arcdeg
2018-09-22T19:14:19.482Z,1537643659.482 [MissionManager](INFO): DefineOutput sci2:Science.PeakChlLongitude = nan arcdeg
2018-09-22T19:14:19.484Z,1537643659.484 [MissionManager](INFO): DefineOutput sci2:Science.PeakNO3 = 0.000000 umol/l
2018-09-22T19:14:19.504Z,1537643659.504 [MissionManager](INFO): DefineOutput sci2:Science.PeakNO3Depth = 0.000000 m
2018-09-22T19:14:19.509Z,1537643659.509 [MissionManager](INFO): DefineOutput sci2:Science.PeakNO3Latitude = nan arcdeg
2018-09-22T19:14:19.511Z,1537643659.511 [MissionManager](INFO): DefineOutput sci2:Science.PeakNO3Longitude = nan arcdeg
2018-09-22T19:14:19.538Z,1537643659.538 [MissionManager](INFO): DefineOutput sci2:Science.PatchChl = 0.000000 m
2018-09-22T19:14:19.543Z,1537643659.543 [MissionManager](INFO): DefineOutput sci2:Science.PatchChlDepth = 0.000000 m
2018-09-22T19:14:19.558Z,1537643659.558 [MissionManager](INFO): DefineOutput sci2:Science.PatchChlLatitude = nan arcdeg
2018-09-22T19:14:19.563Z,1537643659.563 [MissionManager](INFO): DefineOutput sci2:Science.PatchChlLongitude = nan arcdeg
2018-09-22T19:14:19.586Z,1537643659.586 [MissionManager](INFO): DefineOutput sci2:Science.PatchChlDistance = nan m
2018-09-22T19:14:19.588Z,1537643659.588 [MissionManager](INFO): DefineOutput sci2:Science.PeakOil = 0.000000 kg/m3
2018-09-22T19:14:19.590Z,1537643659.590 [MissionManager](INFO): DefineOutput sci2:Science.PeakOilDepth = 0.000000 m
2018-09-22T19:14:19.592Z,1537643659.592 [MissionManager](INFO): DefineOutput sci2:Science.PeakOilLatitude = nan arcdeg
2018-09-22T19:14:19.610Z,1537643659.610 [MissionManager](INFO): DefineOutput sci2:Science.PeakOilLongitude = nan arcdeg
2018-09-22T19:14:19.640Z,1537643659.640 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-22T19:14:19.681Z,1537643659.681 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-22T19:14:19.707Z,1537643659.707 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-22T19:14:19.724Z,1537643659.724 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-22T19:14:19.732Z,1537643659.732 [MissionManager](INFO): RedefineArg sci2:Science.SampleISUS = value:1 bool
2018-09-22T19:14:19.746Z,1537643659.746 [MissionManager](INFO): RedefineArg sci2:Science.PeakDetectChlActive = value:1 bool
2018-09-22T19:14:19.746Z,1537643659.746 [MissionManager](INFO): Inserting Stack: Missions/Insert/NeedComms.xml
2018-09-22T19:14:19.795Z,1537643659.795 [MissionManager](INFO): DefineArg sci2:NeedComms.DiveInterval = 3.000000 h
2018-09-22T19:14:19.804Z,1537643659.804 [MissionManager](INFO): DefineArg sci2:NeedComms.WaitForPitchUp = 10.000000 min
2018-09-22T19:14:19.806Z,1537643659.806 [MissionManager](INFO): DefineArg sci2:NeedComms.SurfacePitch = 20.000000 arcdeg
2018-09-22T19:14:19.808Z,1537643659.808 [MissionManager](INFO): DefineArg sci2:NeedComms.SurfaceDepthRate = nan m/s
2018-09-22T19:14:19.862Z,1537643659.862 [MissionManager](INFO): DefineArg sci2:NeedComms.SurfaceSpeed = 1.000000 m/s
2018-09-22T19:14:19.865Z,1537643659.865 [MissionManager](INFO): DefineArg sci2:NeedComms.GPSTimeout = 7.000000 min
2018-09-22T19:14:19.867Z,1537643659.867 [MissionManager](INFO): DefineArg sci2:NeedComms.CommsTimeout = 30.000000 min
2018-09-22T19:14:19.872Z,1537643659.872 [sci2:NeedComms:B.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-22T19:14:19.915Z,1537643659.915 [MissionManager](INFO): Inserting Stack: Missions/Insert/StandardEnvelopes.xml
2018-09-22T19:14:19.945Z,1537643659.945 [MissionManager](INFO): DefineArg sci2:StandardEnvelopes.MinAltitude = 5.000000 m
2018-09-22T19:14:19.947Z,1537643659.947 [MissionManager](INFO): DefineArg sci2:StandardEnvelopes.MaxDepth = 200.000000 m
2018-09-22T19:14:19.976Z,1537643659.976 [MissionManager](INFO): DefineArg sci2:StandardEnvelopes.MinOffshore = 2000.000000 m
2018-09-22T19:14:19.977Z,1537643659.977 [sci2:StandardEnvelopes:A.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-22T19:14:19.982Z,1537643659.982 [sci2:StandardEnvelopes:B.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-22T19:14:19.995Z,1537643659.995 [sci2:StandardEnvelopes:C.OffshoreEnvelope](DEBUG): Construct OffshoreEnvelope.
2018-09-22T19:14:20.015Z,1537643660.015 [sci2:I.Pitch](DEBUG): Construct.
2018-09-22T19:14:20.019Z,1537643660.019 [sci2:J.Buoyancy](DEBUG): Construct Buoyancy.
2018-09-22T19:14:20.022Z,1537643660.022 [sci2:K.SetSpeed](DEBUG): Construct.
2018-09-22T19:14:20.024Z,1537643660.024 [sci2:L.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-22T19:14:20.031Z,1537643660.031 [sci2:M.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-22T19:14:20.036Z,1537643660.036 [sci2:N.YoYo](DEBUG): Construct YoYo.
2018-09-22T19:14:20.043Z,1537643660.043 [sci2:Lap:Wpt1:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-22T19:14:20.048Z,1537643660.048 [sci2:Lap:Wpt2:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-22T19:14:20.069Z,1537643660.069 [sci2:Lap:Wpt3:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-22T19:14:20.074Z,1537643660.074 [sci2:Lap:Wpt4:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-22T19:14:20.079Z,1537643660.079 [sci2:Lap:Wpt5:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-22T19:14:20.083Z,1537643660.083 [sci2:Lap:Wpt6:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-22T19:14:20.088Z,1537643660.088 [sci2:Lap:Wpt7:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-22T19:14:20.128Z,1537643660.128 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<!-- ====================
     Generated by TethysL
     ==================== -->
<Mission xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xmlns="Tethys"
         xmlns:Units="Tethys/Units"
         xmlns:Control="Tethys/Control"
         xmlns:Guidance="Tethys/Guidance"
         xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                             Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                             Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                             Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd"
       Id="sci2">

    <Description>
        Vehicle yo-yo's to the specified waypoints, with science turned on.
    </Description>
    <DefineArg Name="MissionTimeout"><Description>
        Maximum duration of mission
    </Description><Units:hour/><Value>2</Value></DefineArg>

    <DefineArg Name="NeedCommsTime"><Description>
        How often to surface for commumications
    </Description><Units:minute/><Value>60</Value></DefineArg>

    <DefineArg Name="Repeat"><Description>
        Number of times the vehicle should try to cycle through waypoints..
    </Description><Units:count/><Value>1</Value></DefineArg>

    <DefineArg Name="Lat1"><Description>
        Latitude of waypoint 1. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon1"><Description>
        Longitude of waypoint 1. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat2"><Description>
        Latitude of waypoint 2. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon2"><Description>
        Longitude of waypoint 2. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat3"><Description>
        Latitude of waypoint 3. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon3"><Description>
        Longitude of waypoint 3. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat4"><Description>
        Latitude of waypoint 4. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon4"><Description>
        Longitude of waypoint 4. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat5"><Description>
        Latitude of waypoint 5. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon5"><Description>
        Longitude of waypoint 5. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat6"><Description>
        Latitude of waypoint 6. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon6"><Description>
        Longitude of waypoint 6. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat7"><Description>
        Latitude of waypoint 7. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon7"><Description>
        Longitude of waypoint 7. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Speed"><Description>
        Speed while performing the YoYo behavior.
    </Description><Units:meter_per_second/><Value>1</Value></DefineArg>

    <DefineArg Name="YoYoMinDepth"><Description>
        Minimum depth while performing the YoYo behavior.
    </Description><Units:meter/><Value>2</Value></DefineArg>

    <DefineArg Name="YoYoMaxDepth"><Description>
        Maximum depth while performing the YoYo behavior.
    </Description><Units:meter/><Value>200</Value></DefineArg>

    <DefineArg Name="YoYoMinAltitude"><Description>
        Minimum altitude while performing the YoYo behavior (for
        bottom-terminated YoYos).
    </Description><Units:meter/><Value>9</Value></DefineArg>

    <DefineArg Name="YoYoUpPitch"><Description>
        Vehicle up pitch while performing the YoYo behavior.
    </Description><Units:degree/><Value>20</Value></DefineArg>

    <DefineArg Name="YoYoDownPitch"><Description>
        Vehicle down pitch while performing the YoYo behavior.
    </Description><Units:degree/><Value>-20</Value></DefineArg>

    <DefineArg Name="BuoyancyNeutral"><Description>
        Buoyancy bladder position while performing the YoYo behavior. Defaults
        to buoyancyNeutral setting in the Config/Control.cfg file. Set to NaN cc
        for active buoyancy
    </Description><Control:VerticalControl.buoyancyNeutral/></DefineArg>

    <DefineArg Name="MassDefault"><Description>
        Static setting for mass during the mission. Set to NaN mm for active
        mass position
    </Description><Control:VerticalControl.massDefault/></DefineArg>

    <DefineArg Name="MinAltitude"><Description>
        Minimum height above the sea floor for the entire mission.
    </Description><Units:meter/><Value>5</Value></DefineArg>

    <DefineArg Name="MaxDepth"><Description>
        Maximum depth for the entire mission.
    </Description><Units:meter/><Value>205</Value></DefineArg>

    <DefineArg Name="MinOffshore"><Description>
        Minimum offshore distance for the entire mission.
    </Description><Units:kilometer/><Value>2</Value></DefineArg>
    <Timeout Duration="MissionTimeout"/>

    <Insert Filename="Insert/Science.xml">
        <Description>
            Most missions will run the science sensors. If you don't place this
            aggregate above NeedComms, science instruments get turned off on the
            last upcast and while floating on the surface.
        </Description>
        <RedefineArg Name="SampleISUS"><True/></RedefineArg>
        <RedefineArg Name="PeakDetectChlActive"><True/></RedefineArg>
    </Insert>

    <Insert Filename="Insert/NeedComms.xml" Id="NeedComms"/>

    <Assign><Sequence/><Arg Name="NeedComms:DiveInterval"/><Arg Name="NeedCommsTime"/></Assign>

    <Insert Filename="Insert/StandardEnvelopes.xml"/>

    <Assign><Sequence/><Arg Name="StandardEnvelopes:MinAltitude"/><Arg Name="MinAltitude"/></Assign>

    <Assign><Sequence/><Arg Name="StandardEnvelopes:MaxDepth"/><Arg Name="MaxDepth"/></Assign>

    <Assign><Sequence/><Arg Name="StandardEnvelopes:MinOffshore"/><Arg Name="MinOffshore"/></Assign>

    <Call Id="StartingMission" RefId="NeedComms"/>

    <Guidance:Pitch>
        <Parallel/>
        <Setting><Guidance:Pitch.massPosition/><Arg Name="MassDefault"/></Setting>
    </Guidance:Pitch>

    <Guidance:Buoyancy>
        <Parallel/>
        <Setting><Guidance:Buoyancy.position/><Arg Name="BuoyancyNeutral"/></Setting>
    </Guidance:Buoyancy>

    <Guidance:SetSpeed>
        <Parallel/>
        <Setting><Guidance:SetSpeed.speed/><Arg Name="Speed"/></Setting>
    </Guidance:SetSpeed>

    <Guidance:DepthEnvelope>
        <Description>
            Another depth envelope for the YoYo behavior. This envelope should
            fall within the limits of the standard safety envelopes in
            Insert/StandardEnvelopes.xml in order to avoid commanding high pitch
            angles for depth-terminated YoYos.
        </Description>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.minDepth/><Arg Name="YoYoMinDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="YoYoMaxDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:DepthEnvelope.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:DepthEnvelope>

    <Guidance:AltitudeEnvelope>
        <Description>
            Another altitude envelope for the YoYo behavior. This envelope
            should fall within the limits of the standard safety envelopes in
            Insert/StandardEnvelopes.xml in order to avoid commanding high pitch
            angles for bottom-terminated YoYos.
        </Description>
        <Parallel/>
        <Setting><Guidance:AltitudeEnvelope.minAltitude/><Arg Name="YoYoMinAltitude"/></Setting>
        <Setting><Guidance:AltitudeEnvelope.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:AltitudeEnvelope>

    <Guidance:YoYo>
        <Parallel/>
        <Setting><Guidance:YoYo.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:YoYo.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:YoYo>

    <Aggregate Id="Lap">
        <Sequence Repeat="Repeat"/>

        <Aggregate Id="Wpt1">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat1"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon1"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt2">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat2"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon2"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt3">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat3"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon3"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt4">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat4"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon4"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt5">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat5"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon5"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt6">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat6"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon6"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt7">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat7"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon7"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>
    </Aggregate>
</Mission>

2018-09-22T19:14:20.129Z,1537643660.129 [CommandLine](IMPORTANT): Loaded ./Missions/Science/sci2.xml
2018-09-22T19:14:27.295Z,1537643667.295 [CommandLine](IMPORTANT): got command set sci2.MissionTimeout 1.000000 hour
2018-09-22T19:14:27.296Z,1537643667.296 [CommandLine](IMPORTANT): got command set sci2.NeedCommsTime 30.000000 minute
2018-09-22T19:14:27.308Z,1537643667.308 [CommandLine](IMPORTANT): got command set sci2.Lat1 36.844002 degree
2018-09-22T19:14:27.309Z,1537643667.309 [CommandLine](IMPORTANT): got command set sci2.Lon1 -121.888000 angular_degree
2018-09-22T19:14:27.310Z,1537643667.310 [CommandLine](IMPORTANT): got command set sci2.YoYoMaxDepth 20.000000 meter
2018-09-22T19:14:27.311Z,1537643667.311 [CommandLine](IMPORTANT): got command set sci2.MaxDepth 25.000000 meter
2018-09-22T19:14:27.311Z,1537643667.311 [CommandLine](IMPORTANT): got command run 
2018-09-22T19:14:27.313Z,1537643667.313 [CommandLine](IMPORTANT): Running 
2018-09-22T19:14:27.496Z,1537643667.496 [Default] Stopped
2018-09-22T19:14:27.497Z,1537643667.497 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-22T19:14:27.497Z,1537643667.497 [Default:B.GoToSurface] Stopped
2018-09-22T19:14:27.497Z,1537643667.497 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-22T19:14:27.497Z,1537643667.497 [Default:CheckIn] Stopped
2018-09-22T19:14:27.497Z,1537643667.497 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-22T19:14:27.497Z,1537643667.497 [Default:CheckIn:Read_Iridium] Stopped
2018-09-22T19:14:27.498Z,1537643667.498 [MissionManager](IMPORTANT): Started mission sci2
2018-09-22T19:14:27.498Z,1537643667.498 [sci2] Running Loop=1
2018-09-22T19:14:27.498Z,1537643667.498 [sci2](DEBUG): Aggregate::initialize sci2
2018-09-22T19:14:27.498Z,1537643667.498 [sci2:Science] Running Loop=1
2018-09-22T19:14:27.498Z,1537643667.498 [sci2:Science](DEBUG): Aggregate::initialize sci2:Science
2018-09-22T19:14:27.498Z,1537643667.498 [sci2:Science:A] Running Loop=1
2018-09-22T19:14:27.498Z,1537643667.498 [sci2:Science:B] Running Loop=1
2018-09-22T19:14:27.498Z,1537643667.498 [sci2:Science:C] Running Loop=1
2018-09-22T19:14:27.499Z,1537643667.499 [sci2:Science:D] Running Loop=1
2018-09-22T19:14:27.499Z,1537643667.499 [sci2:Science:E] Running Loop=1
2018-09-22T19:14:27.499Z,1537643667.499 [sci2:Science:F] Running Loop=1
2018-09-22T19:14:27.499Z,1537643667.499 [sci2:Science:G] Running Loop=1
2018-09-22T19:14:27.499Z,1537643667.499 [sci2:Science:Read_Oil] Running Loop=1
2018-09-22T19:14:27.499Z,1537643667.499 [sci2:Science:PeakDetectChl] Running Loop=1
2018-09-22T19:14:27.499Z,1537643667.499 [sci2:Science:PeakDetectChl](DEBUG): Aggregate::initialize sci2:Science:PeakDetectChl
2018-09-22T19:14:27.499Z,1537643667.499 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2018-09-22T19:14:27.499Z,1537643667.499 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-22T19:14:27.500Z,1537643667.500 [sci2:Science:HighestChlPeakReport] Running Loop=1
2018-09-22T19:14:27.501Z,1537643667.501 [sci2:Science:HighestChlPeakReport](DEBUG): Aggregate::initialize sci2:Science:HighestChlPeakReport
2018-09-22T19:14:27.501Z,1537643667.501 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2018-09-22T19:14:27.501Z,1537643667.501 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2018-09-22T19:14:27.501Z,1537643667.501 [sci2:Science:PeakDetectNO3] Running Loop=1
2018-09-22T19:14:27.502Z,1537643667.502 [sci2:Science:PeakDetectNO3](DEBUG): Aggregate::initialize sci2:Science:PeakDetectNO3
2018-09-22T19:14:27.502Z,1537643667.502 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2018-09-22T19:14:27.502Z,1537643667.502 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-22T19:14:27.503Z,1537643667.503 [sci2:Science:PeakDetectOil] Running Loop=1
2018-09-22T19:14:27.503Z,1537643667.503 [sci2:Science:PeakDetectOil](DEBUG): Aggregate::initialize sci2:Science:PeakDetectOil
2018-09-22T19:14:27.503Z,1537643667.503 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2018-09-22T19:14:27.503Z,1537643667.503 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-22T19:14:27.504Z,1537643667.504 [sci2:StandardEnvelopes] Running Loop=1
2018-09-22T19:14:27.504Z,1537643667.504 [sci2:StandardEnvelopes](DEBUG): Aggregate::initialize sci2:StandardEnvelopes
2018-09-22T19:14:27.504Z,1537643667.504 [sci2:StandardEnvelopes:A.AltitudeEnvelope] Running Loop=1
2018-09-22T19:14:27.504Z,1537643667.504 [sci2:StandardEnvelopes:A.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-22T19:14:27.505Z,1537643667.505 [sci2:StandardEnvelopes:B.DepthEnvelope] Running Loop=1
2018-09-22T19:14:27.505Z,1537643667.505 [sci2:StandardEnvelopes:B.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-22T19:14:27.505Z,1537643667.505 [sci2:StandardEnvelopes:C.OffshoreEnvelope] Running Loop=1
2018-09-22T19:14:27.505Z,1537643667.505 [sci2:StandardEnvelopes:C.OffshoreEnvelope](DEBUG): Initialize OffshoreEnvelopeComponent.
2018-09-22T19:14:27.505Z,1537643667.505 [sci2:I.Pitch] Running Loop=1
2018-09-22T19:14:27.505Z,1537643667.505 [sci2:I.Pitch](DEBUG): Initialize.
2018-09-22T19:14:27.505Z,1537643667.505 [sci2:J.Buoyancy] Running Loop=1
2018-09-22T19:14:27.505Z,1537643667.505 [sci2:J.Buoyancy](DEBUG): Initialize Buoyancy Component.
2018-09-22T19:14:27.506Z,1537643667.506 [sci2:K.SetSpeed] Running Loop=1
2018-09-22T19:14:27.506Z,1537643667.506 [sci2:K.SetSpeed](DEBUG): Initialize.
2018-09-22T19:14:27.506Z,1537643667.506 [sci2:L.DepthEnvelope] Running Loop=1
2018-09-22T19:14:27.506Z,1537643667.506 [sci2:L.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-22T19:14:27.506Z,1537643667.506 [sci2:M.AltitudeEnvelope] Running Loop=1
2018-09-22T19:14:27.506Z,1537643667.506 [sci2:M.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-22T19:14:27.506Z,1537643667.506 [sci2:N.YoYo] Running Loop=1
2018-09-22T19:14:27.507Z,1537643667.507 [sci2:N.YoYo](DEBUG): Initialize YoYoComponent.
2018-09-22T19:14:27.507Z,1537643667.507 [sci2:C] Running Loop=1
2018-09-22T19:14:27.507Z,1537643667.507 [sci2:N.YoYo] Running Loop=1
2018-09-22T19:14:27.509Z,1537643667.509 [sci2:M.AltitudeEnvelope] Running Loop=1
2018-09-22T19:14:27.510Z,1537643667.510 [sci2:L.DepthEnvelope] Running Loop=1
2018-09-22T19:14:27.511Z,1537643667.511 [sci2:K.SetSpeed] Running Loop=1
2018-09-22T19:14:27.512Z,1537643667.512 [sci2:J.Buoyancy] Running Loop=1
2018-09-22T19:14:27.514Z,1537643667.514 [sci2:I.Pitch] Running Loop=1
2018-09-22T19:14:27.515Z,1537643667.515 [sci2:StandardEnvelopes] Running Loop=1
2018-09-22T19:14:27.515Z,1537643667.515 [sci2:StandardEnvelopes:C.OffshoreEnvelope] Running Loop=1
2018-09-22T19:14:27.516Z,1537643667.516 [sci2:StandardEnvelopes:B.DepthEnvelope] Running Loop=1
2018-09-22T19:14:27.517Z,1537643667.517 [sci2:StandardEnvelopes:A.AltitudeEnvelope] Running Loop=1
2018-09-22T19:14:27.519Z,1537643667.519 [sci2:C] Stopped
2018-09-22T19:14:27.519Z,1537643667.519 [sci2:E] Running Loop=1
2018-09-22T19:14:27.519Z,1537643667.519 [sci2:Science] Running Loop=1
2018-09-22T19:14:27.546Z,1537643667.546 [sci2:Science:PeakDetectOil] Stopped
2018-09-22T19:14:27.546Z,1537643667.546 [sci2:Science:PeakDetectOil](DEBUG): Aggregate::uninitialize sci2:Science:PeakDetectOil
2018-09-22T19:14:27.547Z,1537643667.547 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2018-09-22T19:14:27.547Z,1537643667.547 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-22T19:14:27.547Z,1537643667.547 [sci2:Science:PeakDetectNO3] Stopped
2018-09-22T19:14:27.547Z,1537643667.547 [sci2:Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize sci2:Science:PeakDetectNO3
2018-09-22T19:14:27.547Z,1537643667.547 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2018-09-22T19:14:27.547Z,1537643667.547 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-22T19:14:27.547Z,1537643667.547 [sci2:Science:HighestChlPeakReport] Stopped
2018-09-22T19:14:27.547Z,1537643667.547 [sci2:Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize sci2:Science:HighestChlPeakReport
2018-09-22T19:14:27.547Z,1537643667.547 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2018-09-22T19:14:27.547Z,1537643667.547 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-22T19:14:27.547Z,1537643667.547 [sci2:Science:PeakDetectChl] Running Loop=1
2018-09-22T19:14:27.548Z,1537643667.548 [sci2:Science:Read_Oil] Running Loop=1
2018-09-22T19:14:27.549Z,1537643667.549 [sci2:Science:Read_Oil](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-22T19:14:27.550Z,1537643667.550 [sci2:Science:G] Running Loop=1
2018-09-22T19:14:27.550Z,1537643667.550 [sci2:Science:G](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-22T19:14:27.551Z,1537643667.551 [sci2:Science:F] Stopped
2018-09-22T19:14:27.551Z,1537643667.551 [sci2:Science:E] Stopped
2018-09-22T19:14:27.551Z,1537643667.551 [sci2:Science:D] Stopped
2018-09-22T19:14:27.551Z,1537643667.551 [sci2:Science:C] Stopped
2018-09-22T19:14:27.551Z,1537643667.551 [sci2:Science:B] Stopped
2018-09-22T19:14:27.552Z,1537643667.552 [sci2:Science:A] Stopped
2018-09-22T19:14:27.676Z,1537643667.676 [sci2:E] Stopped
2018-09-22T19:14:27.676Z,1537643667.676 [sci2:F] Running Loop=1
2018-09-22T19:14:27.701Z,1537643667.701 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-22T19:14:27.702Z,1537643667.702 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-22T19:14:28.049Z,1537643668.049 [sci2:F] Stopped
2018-09-22T19:14:28.049Z,1537643668.049 [sci2:G] Running Loop=1
2018-09-22T19:14:28.381Z,1537643668.381 [ThrusterServo](FAULT): getVelocity uart error serial timeout
2018-09-22T19:14:28.381Z,1537643668.381 [ThrusterServo](FAULT): Thruster uart error: serial timeout
2018-09-22T19:14:28.381Z,1537643668.381 [ThrusterServo] Communications Fault, FailCount= 2
2018-09-22T19:14:28.381Z,1537643668.381 [ThrusterServo](ERROR): Communications Fault
2018-09-22T19:14:28.385Z,1537643668.385 [CBIT](ERROR): Communications Fault in component: ThrusterServo
2018-09-22T19:14:28.553Z,1537643668.553 [sci2:G] Stopped
2018-09-22T19:14:28.553Z,1537643668.553 [sci2:StartingMission] Running Loop=1
2018-09-22T19:14:28.553Z,1537643668.553 [sci2:StartingMission](DEBUG): Aggregate::initialize sci2:StartingMission
2018-09-22T19:14:28.683Z,1537643668.683 [ThrusterServo](DEBUG): Uninitialize Thruster Servo.
2018-09-22T19:14:28.683Z,1537643668.683 [ThrusterServo](INFO): Powering down
2018-09-22T19:14:28.869Z,1537643668.869 [sci2:NeedComms] Running Loop=1
2018-09-22T19:14:28.869Z,1537643668.869 [sci2:NeedComms](DEBUG): Aggregate::initialize sci2:NeedComms
2018-09-22T19:14:28.869Z,1537643668.869 [sci2:NeedComms:B.GoToSurface] Running Loop=1
2018-09-22T19:14:28.870Z,1537643668.870 [sci2:NeedComms:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-22T19:14:28.870Z,1537643668.870 [sci2:NeedComms:B.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-22T19:14:28.870Z,1537643668.870 [sci2:NeedComms:B.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-22T19:14:28.871Z,1537643668.871 [sci2:NeedComms:B.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-22T19:14:28.871Z,1537643668.871 [sci2:NeedComms:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-22T19:14:28.872Z,1537643668.872 [sci2:NeedComms:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-22T19:14:28.872Z,1537643668.872 [sci2:NeedComms:A] Running Loop=1
2018-09-22T19:14:28.874Z,1537643668.874 [sci2:NeedComms:A](INFO): last time_fix was: 1537643623.000000 second since 1970/01/01T00:00:00Z 
2018-09-22T19:14:28.875Z,1537643668.875 [sci2:NeedComms:A] Stopped
2018-09-22T19:14:29.265Z,1537643669.265 [sci2:NeedComms:C] Running Loop=1
2018-09-22T19:14:29.564Z,1537643669.564 [CBIT](INFO): Clearing failed state for component ThrusterServo
2018-09-22T19:14:29.564Z,1537643669.564 [ThrusterServo] No Fault, FailCount= 2
2018-09-22T19:14:29.676Z,1537643669.676 [sci2:NeedComms:C](DEBUG): Initialize ReadDataComponent to sense time_fix
2018-09-22T19:14:29.759Z,1537643669.759 [ThrusterServo](DEBUG): Initializing EZServoServo.
2018-09-22T19:14:29.765Z,1537643669.765 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2018-09-22T19:14:31.211Z,1537643671.211 [NAL9602](INFO): GPS fix at 20180922T191419: (36.832962, -121.899440)
2018-09-22T19:14:31.281Z,1537643671.281 [sci2:NeedComms:C] Stopped
2018-09-22T19:14:31.281Z,1537643671.281 [sci2:NeedComms:D] Running Loop=1
2018-09-22T19:14:31.678Z,1537643671.678 [sci2:NeedComms:D](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-22T19:14:55.400Z,1537643695.400 [NAL9602](INFO): SBD MO Status=1, MOMSN=1119, MT Status=0, MTMSN=0
2018-09-22T19:14:55.453Z,1537643695.453 [NAL9602](INFO): Sent 63 bytes from file Logs/20180922T190757/Courier0006.lzma
2018-09-22T19:14:55.453Z,1537643695.453 [NAL9602](INFO): Packets left to send: 0
2018-09-22T19:14:55.455Z,1537643695.455 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Courier0006.lzma.parts/0000.sbd
2018-09-22T19:14:55.455Z,1537643695.455 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Courier0006.lzma
2018-09-22T19:15:04.272Z,1537643704.272 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:15:07.084Z,1537643707.084 [NAL9602](INFO): SBD MO Status=1, MOMSN=1120, MT Status=0, MTMSN=0
2018-09-22T19:15:07.134Z,1537643707.134 [NAL9602](INFO): Sent 63 bytes from file Logs/20180922T190757/Courier0009.lzma
2018-09-22T19:15:07.134Z,1537643707.134 [NAL9602](INFO): Packets left to send: 0
2018-09-22T19:15:07.136Z,1537643707.136 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Courier0009.lzma.parts/0000.sbd
2018-09-22T19:15:07.136Z,1537643707.136 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Courier0009.lzma
2018-09-22T19:15:29.632Z,1537643729.632 [NAL9602](INFO): SBD MO Status=2, MOMSN=1121, MT Status=2, MTMSN=0
2018-09-22T19:15:29.632Z,1537643729.632 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-22T19:15:49.792Z,1537643749.792 [NAL9602](INFO): SBD MO Status=1, MOMSN=1121, MT Status=0, MTMSN=0
2018-09-22T19:15:49.845Z,1537643749.845 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T042434/Express0098.lzma
2018-09-22T19:15:49.845Z,1537643749.845 [NAL9602](INFO): Packets left to send: 4
2018-09-22T19:15:49.847Z,1537643749.847 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T042434/Express0098.lzma.parts/0004.sbd
2018-09-22T19:16:01.968Z,1537643761.968 [NAL9602](INFO): SBD MO Status=1, MOMSN=1122, MT Status=0, MTMSN=0
2018-09-22T19:16:02.017Z,1537643762.017 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T042434/Express0098.lzma
2018-09-22T19:16:02.017Z,1537643762.017 [NAL9602](INFO): Packets left to send: 3
2018-09-22T19:16:02.019Z,1537643762.019 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T042434/Express0098.lzma.parts/0003.sbd
2018-09-22T19:16:05.479Z,1537643765.479 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:16:15.056Z,1537643775.056 [NAL9602](INFO): SBD MO Status=1, MOMSN=1123, MT Status=0, MTMSN=0
2018-09-22T19:16:15.105Z,1537643775.105 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T042434/Express0098.lzma
2018-09-22T19:16:15.106Z,1537643775.106 [NAL9602](INFO): Packets left to send: 2
2018-09-22T19:16:15.107Z,1537643775.107 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T042434/Express0098.lzma.parts/0002.sbd
2018-09-22T19:16:28.372Z,1537643788.372 [NAL9602](INFO): SBD MO Status=1, MOMSN=1124, MT Status=0, MTMSN=0
2018-09-22T19:16:28.430Z,1537643788.430 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T042434/Express0098.lzma
2018-09-22T19:16:28.431Z,1537643788.431 [NAL9602](INFO): Packets left to send: 1
2018-09-22T19:16:28.433Z,1537643788.433 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T042434/Express0098.lzma.parts/0001.sbd
2018-09-22T19:16:48.581Z,1537643808.581 [NAL9602](INFO): SBD MO Status=1, MOMSN=1125, MT Status=0, MTMSN=0
2018-09-22T19:16:48.637Z,1537643808.637 [NAL9602](INFO): Sent 114 bytes from file Logs/20180922T042434/Express0098.lzma
2018-09-22T19:16:48.637Z,1537643808.637 [NAL9602](INFO): Packets left to send: 0
2018-09-22T19:16:48.639Z,1537643808.639 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T042434/Express0098.lzma.parts/0000.sbd
2018-09-22T19:16:48.639Z,1537643808.639 [NAL9602](DEBUG): Completed sending Logs/20180922T042434/Express0098.lzma
2018-09-22T19:16:57.944Z,1537643817.944 [NAL9602](INFO): SBD MO Status=1, MOMSN=1126, MT Status=0, MTMSN=0
2018-09-22T19:16:57.993Z,1537643817.993 [NAL9602](INFO): Sent 257 bytes from file Logs/20180922T190757/Express0001.lzma
2018-09-22T19:16:57.994Z,1537643817.994 [NAL9602](INFO): Packets left to send: 0
2018-09-22T19:16:57.995Z,1537643817.995 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0001.lzma.parts/0000.sbd
2018-09-22T19:16:57.995Z,1537643817.995 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Express0001.lzma
2018-09-22T19:17:04.556Z,1537643824.556 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:17:35.768Z,1537643855.768 [NAL9602](INFO): SBD MO Status=2, MOMSN=1127, MT Status=2, MTMSN=0
2018-09-22T19:17:35.768Z,1537643855.768 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-22T19:17:53.534Z,1537643873.534 [NAL9602](INFO): SBD MO Status=1, MOMSN=1127, MT Status=0, MTMSN=0
2018-09-22T19:17:53.581Z,1537643873.581 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0004.lzma
2018-09-22T19:17:53.581Z,1537643873.581 [NAL9602](INFO): Packets left to send: 1
2018-09-22T19:17:53.583Z,1537643873.583 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0004.lzma.parts/0001.sbd
2018-09-22T19:18:02.500Z,1537643882.500 [NAL9602](INFO): SBD MO Status=1, MOMSN=1128, MT Status=0, MTMSN=0
2018-09-22T19:18:02.566Z,1537643882.566 [NAL9602](INFO): Sent 168 bytes from file Logs/20180922T190757/Express0004.lzma
2018-09-22T19:18:02.566Z,1537643882.566 [NAL9602](INFO): Packets left to send: 0
2018-09-22T19:18:02.568Z,1537643882.568 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0004.lzma.parts/0000.sbd
2018-09-22T19:18:02.568Z,1537643882.568 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Express0004.lzma
2018-09-22T19:18:05.903Z,1537643885.903 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:18:25.076Z,1537643905.076 [NAL9602](INFO): SBD MO Status=1, MOMSN=1129, MT Status=0, MTMSN=0
2018-09-22T19:18:25.121Z,1537643905.121 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0007.lzma
2018-09-22T19:18:25.121Z,1537643905.121 [NAL9602](INFO): Packets left to send: 1
2018-09-22T19:18:25.123Z,1537643905.123 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0007.lzma.parts/0001.sbd
2018-09-22T19:18:44.016Z,1537643924.016 [NAL9602](INFO): SBD MO Status=2, MOMSN=1130, MT Status=2, MTMSN=0
2018-09-22T19:18:44.016Z,1537643924.016 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-22T19:19:02.952Z,1537643942.952 [NAL9602](INFO): SBD MO Status=1, MOMSN=1130, MT Status=0, MTMSN=0
2018-09-22T19:19:03.001Z,1537643943.001 [NAL9602](INFO): Sent 30 bytes from file Logs/20180922T190757/Express0007.lzma
2018-09-22T19:19:03.001Z,1537643943.001 [NAL9602](INFO): Packets left to send: 0
2018-09-22T19:19:03.003Z,1537643943.003 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0007.lzma.parts/0000.sbd
2018-09-22T19:19:03.003Z,1537643943.003 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Express0007.lzma
2018-09-22T19:19:06.318Z,1537643946.318 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:19:19.920Z,1537643959.920 [NAL9602](INFO): SBD MO Status=1, MOMSN=1131, MT Status=0, MTMSN=0
2018-09-22T19:19:19.981Z,1537643959.981 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0010.lzma
2018-09-22T19:19:19.981Z,1537643959.981 [NAL9602](INFO): Packets left to send: 1
2018-09-22T19:19:19.984Z,1537643959.984 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0010.lzma.parts/0001.sbd
2018-09-22T19:19:35.732Z,1537643975.732 [NAL9602](INFO): SBD MO Status=1, MOMSN=1132, MT Status=0, MTMSN=0
2018-09-22T19:19:35.786Z,1537643975.786 [NAL9602](INFO): Sent 65 bytes from file Logs/20180922T190757/Express0010.lzma
2018-09-22T19:19:35.786Z,1537643975.786 [NAL9602](INFO): Packets left to send: 0
2018-09-22T19:19:35.787Z,1537643975.787 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0010.lzma.parts/0000.sbd
2018-09-22T19:19:35.787Z,1537643975.787 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Express0010.lzma
2018-09-22T19:19:51.745Z,1537643991.745 [NAL9602](INFO): SBD MO Status=0, MOMSN=1133, MT Status=0, MTMSN=0
2018-09-22T19:20:05.082Z,1537644005.082 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:20:17.088Z,1537644017.088 [NAL9602](INFO): SBD MO Status=2, MOMSN=1134, MT Status=2, MTMSN=0
2018-09-22T19:20:17.088Z,1537644017.088 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-22T19:20:34.452Z,1537644034.452 [NAL9602](INFO): SBD MO Status=2, MOMSN=1134, MT Status=2, MTMSN=0
2018-09-22T19:20:34.452Z,1537644034.452 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-22T19:21:05.403Z,1537644065.403 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:21:12.604Z,1537644072.604 [NAL9602](INFO): SBD MO Status=2, MOMSN=1134, MT Status=2, MTMSN=0
2018-09-22T19:21:12.604Z,1537644072.604 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-22T19:21:35.922Z,1537644095.922 [NAL9602](INFO): SBD MO Status=2, MOMSN=1134, MT Status=2, MTMSN=0
2018-09-22T19:21:35.923Z,1537644095.923 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-22T19:21:54.864Z,1537644114.864 [NAL9602](INFO): SBD MO Status=2, MOMSN=1134, MT Status=2, MTMSN=0
2018-09-22T19:21:54.864Z,1537644114.864 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-22T19:22:05.808Z,1537644125.808 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:22:19.426Z,1537644139.426 [NAL9602](INFO): SBD MO Status=2, MOMSN=1134, MT Status=2, MTMSN=0
2018-09-22T19:22:19.426Z,1537644139.426 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-22T19:22:44.028Z,1537644164.028 [NAL9602](INFO): SBD MO Status=2, MOMSN=1134, MT Status=2, MTMSN=0
2018-09-22T19:22:44.028Z,1537644164.028 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-22T19:23:05.928Z,1537644185.928 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:23:10.743Z,1537644190.743 [NAL9602](INFO): SBD MO Status=2, MOMSN=1134, MT Status=2, MTMSN=0
2018-09-22T19:23:10.743Z,1537644190.743 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-22T19:23:29.676Z,1537644209.676 [NAL9602](INFO): SBD MO Status=1, MOMSN=1134, MT Status=0, MTMSN=0
2018-09-22T19:23:29.729Z,1537644209.729 [NAL9602](INFO): Sent 25 bytes from file Logs/20180922T190757/Courier0012.lzma
2018-09-22T19:23:29.729Z,1537644209.729 [NAL9602](INFO): Packets left to send: 0
2018-09-22T19:23:29.731Z,1537644209.731 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Courier0012.lzma.parts/0000.sbd
2018-09-22T19:23:29.731Z,1537644209.731 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Courier0012.lzma
2018-09-22T19:23:46.632Z,1537644226.632 [NAL9602](INFO): SBD MO Status=1, MOMSN=1135, MT Status=0, MTMSN=0
2018-09-22T19:23:46.681Z,1537644226.681 [NAL9602](INFO): Sent 318 bytes from file Logs/20180922T190757/Express0013.lzma
2018-09-22T19:23:46.681Z,1537644226.681 [NAL9602](INFO): Packets left to send: 0
2018-09-22T19:23:46.683Z,1537644226.683 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0013.lzma.parts/0000.sbd
2018-09-22T19:23:46.683Z,1537644226.683 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Express0013.lzma
2018-09-22T19:24:06.212Z,1537644246.212 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:24:52.235Z,1537644292.235 [NAL9602](FAULT): Verify xmit timeout failure.
2018-09-22T19:24:52.235Z,1537644292.235 [NAL9602] Data Fault, FailCount= 1
2018-09-22T19:24:52.235Z,1537644292.235 [NAL9602](ERROR): Data Fault
2018-09-22T19:24:52.321Z,1537644292.321 [CBIT](ERROR): Data Fault in component: NAL9602
2018-09-22T19:24:52.651Z,1537644292.651 [NAL9602](INFO): Powering down
2018-09-22T19:24:53.497Z,1537644293.497 [CBIT](INFO): Clearing failed state for component NAL9602
2018-09-22T19:24:53.497Z,1537644293.497 [NAL9602] No Fault, FailCount= 1
2018-09-22T19:25:06.215Z,1537644306.215 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:25:23.026Z,1537644323.026 [NAL9602](INFO): Powering up NAL9602
2018-09-22T19:25:34.216Z,1537644334.216 [NAL9602](INFO): NAL9602 initialized
2018-09-22T19:25:47.820Z,1537644347.820 [NAL9602](INFO): SBD MO Status=0, MOMSN=1136, MT Status=0, MTMSN=0
2018-09-22T19:25:47.931Z,1537644347.931 [sci2:NeedComms:D] Stopped
2018-09-22T19:25:47.931Z,1537644347.931 [sci2:NeedComms:E] Running Loop=1
2018-09-22T19:25:48.280Z,1537644348.280 [sci2:NeedComms:E](DEBUG): Initialize ReadDataComponent to sense time_fix
2018-09-22T19:26:06.216Z,1537644366.216 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:27:07.012Z,1537644427.012 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:27:08.632Z,1537644428.632 [NAL9602](INFO): GPS fix at 20180922T192657: (36.832270, -121.899601)
2018-09-22T19:27:08.714Z,1537644428.714 [sci2:NeedComms:E] Stopped
2018-09-22T19:27:08.715Z,1537644428.715 [sci2:NeedComms](INFO): Completed sci2:NeedComms
2018-09-22T19:27:08.716Z,1537644428.716 [sci2:NeedComms] Stopped
2018-09-22T19:27:08.716Z,1537644428.716 [sci2:NeedComms](DEBUG): Aggregate::uninitialize sci2:NeedComms
2018-09-22T19:27:08.716Z,1537644428.716 [sci2:NeedComms:B.GoToSurface] Stopped
2018-09-22T19:27:08.716Z,1537644428.716 [sci2:NeedComms:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-22T19:27:09.084Z,1537644429.084 [sci2:StartingMission](INFO): Completed sci2:StartingMission
2018-09-22T19:27:09.084Z,1537644429.084 [sci2:StartingMission] Stopped
2018-09-22T19:27:09.084Z,1537644429.084 [sci2:StartingMission](DEBUG): Aggregate::uninitialize sci2:StartingMission
2018-09-22T19:27:09.085Z,1537644429.085 [sci2:Lap] Running Loop=1
2018-09-22T19:27:09.089Z,1537644429.089 [sci2:Lap](DEBUG): Aggregate::initialize sci2:Lap
2018-09-22T19:27:09.089Z,1537644429.089 [sci2:Lap:Wpt1] Running Loop=1
2018-09-22T19:27:09.089Z,1537644429.089 [sci2:Lap:Wpt1](DEBUG): Aggregate::initialize sci2:Lap:Wpt1
2018-09-22T19:27:09.090Z,1537644429.090 [sci2:Lap:Wpt1:A.Waypoint] Running Loop=1
2018-09-22T19:27:09.090Z,1537644429.090 [sci2:Lap:Wpt1:A.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-22T19:27:30.907Z,1537644450.907 [Radio_Surface](INFO): Powering down
2018-09-22T19:27:40.622Z,1537644460.622 [NAL9602](INFO): Powering down
2018-09-22T19:28:06.630Z,1537644486.630 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:29:07.022Z,1537644547.022 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:30:07.033Z,1537644607.033 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:31:07.041Z,1537644667.041 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:32:07.074Z,1537644727.074 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:33:07.442Z,1537644787.442 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:34:07.830Z,1537644847.830 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:35:08.236Z,1537644908.236 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:36:07.848Z,1537644967.848 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:37:07.841Z,1537645027.841 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:38:08.644Z,1537645088.644 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:39:08.645Z,1537645148.645 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:40:08.656Z,1537645208.656 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:41:09.039Z,1537645269.039 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:42:09.438Z,1537645329.438 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:43:09.436Z,1537645389.436 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:43:12.677Z,1537645392.677 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-22T19:43:12.677Z,1537645392.677 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,1809268,-32768,-32768,-32768,V
2018-09-22T19:44:10.239Z,1537645450.239 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:45:09.852Z,1537645509.852 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:45:37.196Z,1537645537.196 [ThrusterServo](FAULT): Overload Error
2018-09-22T19:45:37.196Z,1537645537.196 [ThrusterServo] Hardware Fault, FailCount= 1
2018-09-22T19:45:37.196Z,1537645537.196 [ThrusterServo](ERROR): Hardware Fault
2018-09-22T19:45:37.201Z,1537645537.201 [CBIT](ERROR): Hardware Fault in component: ThrusterServo
2018-09-22T19:45:37.573Z,1537645537.573 [ThrusterServo](DEBUG): Uninitialize Thruster Servo.
2018-09-22T19:45:37.574Z,1537645537.574 [ThrusterServo](INFO): Powering down
2018-09-22T19:45:38.392Z,1537645538.392 [ThrusterServo](DEBUG): Initializing EZServoServo.
2018-09-22T19:45:38.506Z,1537645538.506 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2018-09-22T19:45:38.510Z,1537645538.510 [CBIT](INFO): Clearing failed state for component ThrusterServo
2018-09-22T19:45:38.510Z,1537645538.510 [ThrusterServo] No Fault, FailCount= 1
2018-09-22T19:45:45.701Z,1537645545.701 [ThrusterServo](FAULT): Overload Error
2018-09-22T19:45:45.701Z,1537645545.701 [ThrusterServo] Hardware Fault, FailCount= 2
2018-09-22T19:45:45.701Z,1537645545.701 [ThrusterServo](ERROR): Hardware Fault
2018-09-22T19:45:45.705Z,1537645545.705 [CBIT](ERROR): Hardware Fault in component: ThrusterServo
2018-09-22T19:45:46.062Z,1537645546.062 [ThrusterServo](DEBUG): Uninitialize Thruster Servo.
2018-09-22T19:45:46.062Z,1537645546.062 [ThrusterServo](INFO): Powering down
2018-09-22T19:45:46.801Z,1537645546.801 [ThrusterServo](DEBUG): Initializing EZServoServo.
2018-09-22T19:45:46.922Z,1537645546.922 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2018-09-22T19:45:46.926Z,1537645546.926 [CBIT](INFO): Clearing failed state for component ThrusterServo
2018-09-22T19:45:46.926Z,1537645546.926 [ThrusterServo] No Fault, FailCount= 2
2018-09-22T19:45:53.581Z,1537645553.581 [ThrusterServo](FAULT): Overload Error
2018-09-22T19:45:53.581Z,1537645553.581 [ThrusterServo] Hardware Fault, FailCount= 3
2018-09-22T19:45:53.581Z,1537645553.581 [ThrusterServo](ERROR): Hardware Fault
2018-09-22T19:45:53.586Z,1537645553.586 [CBIT](ERROR): Hardware Fault in component: ThrusterServo
2018-09-22T19:45:54.003Z,1537645554.003 [ThrusterServo](DEBUG): Uninitialize Thruster Servo.
2018-09-22T19:45:54.003Z,1537645554.003 [ThrusterServo](INFO): Powering down
2018-09-22T19:45:54.722Z,1537645554.722 [ThrusterServo](DEBUG): Initializing EZServoServo.
2018-09-22T19:45:54.842Z,1537645554.842 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2018-09-22T19:45:54.847Z,1537645554.847 [CBIT](INFO): Clearing failed state for component ThrusterServo
2018-09-22T19:45:54.847Z,1537645554.847 [ThrusterServo] No Fault, FailCount= 3
2018-09-22T19:46:01.145Z,1537645561.145 [ThrusterServo](FAULT): Overload Error
2018-09-22T19:46:01.145Z,1537645561.145 [ThrusterServo] Hardware Fault, FailCount= 4
2018-09-22T19:46:01.145Z,1537645561.145 [ThrusterServo](ERROR): Hardware Fault
2018-09-22T19:46:01.149Z,1537645561.149 [CBIT](ERROR): Hardware Fault in component: ThrusterServo
2018-09-22T19:46:01.511Z,1537645561.511 [ThrusterServo](DEBUG): Uninitialize Thruster Servo.
2018-09-22T19:46:01.511Z,1537645561.511 [ThrusterServo](INFO): Powering down
2018-09-22T19:46:02.372Z,1537645562.372 [ThrusterServo](DEBUG): Initializing EZServoServo.
2018-09-22T19:46:02.491Z,1537645562.491 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2018-09-22T19:46:02.495Z,1537645562.495 [CBIT](INFO): Clearing failed state for component ThrusterServo
2018-09-22T19:46:02.495Z,1537645562.495 [ThrusterServo] No Fault, FailCount= 4
2018-09-22T19:46:09.654Z,1537645569.654 [ThrusterServo](FAULT): Overload Error
2018-09-22T19:46:09.654Z,1537645569.654 [ThrusterServo] Hardware Fault, FailCount= 5
2018-09-22T19:46:09.654Z,1537645569.654 [ThrusterServo](ERROR): Hardware Fault
2018-09-22T19:46:09.661Z,1537645569.661 [CBIT](ERROR): Hardware Fault in component: ThrusterServo
2018-09-22T19:46:09.661Z,1537645569.661 [CBIT](CRITICAL): Hardware Fault in component: ThrusterServo
2018-09-22T19:46:09.970Z,1537645569.970 [ThrusterServo](DEBUG): Uninitialize Thruster Servo.
2018-09-22T19:46:09.970Z,1537645569.970 [ThrusterServo](INFO): Powering down
2018-09-22T19:46:09.972Z,1537645569.972 [CommandLine](FAULT): Scheduling is paused
2018-09-22T19:46:09.973Z,1537645569.973 [CBIT](INFO): Critical error at 20180922T194609
2018-09-22T19:46:09.973Z,1537645569.973 [Supervisor](INFO): Stop Mission called by CBIT::checkCriticals
2018-09-22T19:46:10.292Z,1537645570.292 [MissionManager](INFO): MissionManager is completed.
2018-09-22T19:46:10.292Z,1537645570.292 [MissionManager](INFO): Uninitializing Mission sci2
2018-09-22T19:46:10.292Z,1537645570.292 [sci2] Stopped
2018-09-22T19:46:10.292Z,1537645570.292 [sci2](DEBUG): Aggregate::uninitialize sci2
2018-09-22T19:46:10.292Z,1537645570.292 [sci2:Science] Stopped
2018-09-22T19:46:10.292Z,1537645570.292 [sci2:Science](DEBUG): Aggregate::uninitialize sci2:Science
2018-09-22T19:46:10.293Z,1537645570.293 [sci2:Science:G] Stopped
2018-09-22T19:46:10.293Z,1537645570.293 [sci2:Science:Read_Oil] Stopped
2018-09-22T19:46:10.293Z,1537645570.293 [sci2:Science:PeakDetectChl] Stopped
2018-09-22T19:46:10.293Z,1537645570.293 [sci2:Science:PeakDetectChl](DEBUG): Aggregate::uninitialize sci2:Science:PeakDetectChl
2018-09-22T19:46:10.293Z,1537645570.293 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2018-09-22T19:46:10.293Z,1537645570.293 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-22T19:46:10.294Z,1537645570.294 [sci2:StandardEnvelopes] Stopped
2018-09-22T19:46:10.294Z,1537645570.294 [sci2:StandardEnvelopes](DEBUG): Aggregate::uninitialize sci2:StandardEnvelopes
2018-09-22T19:46:10.294Z,1537645570.294 [sci2:StandardEnvelopes:A.AltitudeEnvelope] Stopped
2018-09-22T19:46:10.294Z,1537645570.294 [sci2:StandardEnvelopes:A.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-22T19:46:10.294Z,1537645570.294 [sci2:StandardEnvelopes:B.DepthEnvelope] Stopped
2018-09-22T19:46:10.294Z,1537645570.294 [sci2:StandardEnvelopes:B.DepthEnvelope](DEBUG): Uninitialize.
2018-09-22T19:46:10.294Z,1537645570.294 [sci2:StandardEnvelopes:C.OffshoreEnvelope] Stopped
2018-09-22T19:46:10.294Z,1537645570.294 [sci2:StandardEnvelopes:C.OffshoreEnvelope](DEBUG): Uninitialize OffshoreEnvelopeComponent.
2018-09-22T19:46:10.294Z,1537645570.294 [sci2:I.Pitch] Stopped
2018-09-22T19:46:10.294Z,1537645570.294 [sci2:J.Buoyancy] Stopped
2018-09-22T19:46:10.294Z,1537645570.294 [sci2:J.Buoyancy](DEBUG): Uninitialize Buoyancy Component.
2018-09-22T19:46:10.294Z,1537645570.295 [sci2:K.SetSpeed] Stopped
2018-09-22T19:46:10.295Z,1537645570.295 [sci2:K.SetSpeed](DEBUG): Uninitialize.
2018-09-22T19:46:10.295Z,1537645570.295 [sci2:L.DepthEnvelope] Stopped
2018-09-22T19:46:10.295Z,1537645570.295 [sci2:L.DepthEnvelope](DEBUG): Uninitialize.
2018-09-22T19:46:10.295Z,1537645570.295 [sci2:M.AltitudeEnvelope] Stopped
2018-09-22T19:46:10.295Z,1537645570.295 [sci2:M.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-22T19:46:10.295Z,1537645570.295 [sci2:N.YoYo] Stopped
2018-09-22T19:46:10.295Z,1537645570.295 [sci2:N.YoYo](DEBUG): Uninitialize YoYoComponent.
2018-09-22T19:46:10.295Z,1537645570.295 [sci2:Lap] Stopped
2018-09-22T19:46:10.295Z,1537645570.295 [sci2:Lap](DEBUG): Aggregate::uninitialize sci2:Lap
2018-09-22T19:46:10.295Z,1537645570.295 [sci2:Lap:Wpt1] Stopped
2018-09-22T19:46:10.296Z,1537645570.296 [sci2:Lap:Wpt1](DEBUG): Aggregate::uninitialize sci2:Lap:Wpt1
2018-09-22T19:46:10.296Z,1537645570.296 [sci2:Lap:Wpt1:A.Waypoint] Stopped
2018-09-22T19:46:10.296Z,1537645570.296 [sci2:Lap:Wpt1:A.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-22T19:46:10.533Z,1537645570.533 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-22T19:46:10.636Z,1537645570.636 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:46:10.726Z,1537645570.726 [MissionManager](IMPORTANT): Started mission Default
2018-09-22T19:46:10.727Z,1537645570.727 [Default] Running Loop=1
2018-09-22T19:46:10.727Z,1537645570.727 [Default](DEBUG): Aggregate::initialize Default
2018-09-22T19:46:10.727Z,1537645570.727 [Default:B.GoToSurface] Running Loop=1
2018-09-22T19:46:10.727Z,1537645570.727 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-22T19:46:10.727Z,1537645570.727 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-22T19:46:10.728Z,1537645570.728 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-22T19:46:10.728Z,1537645570.728 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-22T19:46:10.728Z,1537645570.728 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-22T19:46:10.733Z,1537645570.733 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-22T19:46:10.733Z,1537645570.733 [Default:A.Wait] Running Loop=1
2018-09-22T19:46:10.733Z,1537645570.733 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-22T19:46:10.823Z,1537645570.823 [ThrusterServo](DEBUG): Initializing EZServoServo.
2018-09-22T19:46:10.942Z,1537645570.942 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2018-09-22T19:46:23.745Z,1537645583.745 [BuoyancyServo](ERROR): getPosition uart error serial timeout
2018-09-22T19:46:23.745Z,1537645583.745 [BuoyancyServo](FAULT): Buoyancy getPosition uart error.serial timeout
2018-09-22T19:46:23.745Z,1537645583.745 [BuoyancyServo] Communications Fault, FailCount= 4
2018-09-22T19:46:23.745Z,1537645583.745 [BuoyancyServo](ERROR): Communications Fault
2018-09-22T19:46:23.858Z,1537645583.858 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-09-22T19:46:23.946Z,1537645583.946 [Default:A.Wait](INFO): Done Waiting.
2018-09-22T19:46:23.947Z,1537645583.947 [Default:A.Wait] Stopped
2018-09-22T19:46:23.947Z,1537645583.947 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-22T19:46:23.957Z,1537645583.957 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-22T19:46:23.958Z,1537645583.958 [BuoyancyServo](INFO): Powering down
2018-09-22T19:46:24.719Z,1537645584.718 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-22T19:46:24.719Z,1537645584.719 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-3268,-32768,V
2018-09-22T19:46:25.564Z,1537645585.564 [BuoyancyServo](FAULT): LCB fault:  Current Limiter Activated.
2018-09-22T19:46:25.564Z,1537645585.564 [BuoyancyServo] Hardware Fault, FailCount= 4
2018-09-22T19:46:25.564Z,1537645585.564 [BuoyancyServo](ERROR): Hardware Fault
2018-09-22T19:46:25.985Z,1537645585.985 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-22T19:46:25.986Z,1537645585.986 [BuoyancyServo] No Fault, FailCount= 4
2018-09-22T19:46:26.376Z,1537645586.376 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-22T19:46:26.496Z,1537645586.496 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-22T19:46:39.762Z,1537645599.762 [CBIT](INFO): Clearing failed state for component ThrusterServo
2018-09-22T19:46:39.762Z,1537645599.762 [ThrusterServo] No Fault, FailCount= 5
2018-09-22T19:46:52.881Z,1537645612.881 [ThrusterServo](INFO): Failure count cleared after critical for ThrusterServo
2018-09-22T19:47:10.706Z,1537645630.706 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T19:47:17.138Z,1537645637.138 [Default:CheckIn] Running Loop=1
2018-09-22T19:47:17.138Z,1537645637.138 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-22T19:47:17.138Z,1537645637.138 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-22T19:47:17.282Z,1537645637.282 [Radio_Surface](INFO): Powering up
2018-09-22T19:47:17.886Z,1537645637.886 [NAL9602](INFO): Powering up
2018-09-22T19:47:28.814Z,1537645648.814 [NAL9602](INFO): NAL9602 initialized
2018-09-22T19:47:57.272Z,1537645677.272 [NAL9602](INFO): SBD MO Status=2, MOMSN=1137, MT Status=2, MTMSN=0
2018-09-22T19:47:57.273Z,1537645677.273 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-22T19:47:58.691Z,1537645678.691 [RDI_Pathfinder](ERROR): Failed to parse:
:HM,G,D,0e8d,0ffe, 14.194, -0.125, 0.000
2018-09-22T19:47:59.860Z,1537645679.860 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.002951
2018-09-22T19:48:16.273Z,1537645696.273 [NAL9602](INFO): SBD MO Status=0, MOMSN=1137, MT Status=0, MTMSN=0
2018-09-22T19:48:16.273Z,1537645696.273 [NAL9602](INFO): No messages in MT queue
2018-09-22T19:49:43.718Z,1537645783.718 [NAL9602](INFO): GPS fix at 20180922T194932: (36.839470, -121.893450)
2018-09-22T19:49:43.787Z,1537645783.787 [UniversalFixResidualReporter](INFO): Fix residual: 15.6 %DT, over the last 1139.2 m. Residual distance 177.6 m at bearing 58.6 degrees. Fix at (36.8395, -121.8934) with 969.9 m made good.
2018-09-22T19:49:43.788Z,1537645783.788 [Default:CheckIn:Read_GPS] Stopped
2018-09-22T19:49:43.788Z,1537645783.788 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-22T19:49:49.604Z,1537645789.604 [DataOverHttps](INFO): Sending 146 bytes from file Logs/20180922T190757/Courier0015.lzma
2018-09-22T19:49:50.409Z,1537645790.409 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0015.lzma.bak
2018-09-22T19:49:50.409Z,1537645790.409 [DataOverHttps](INFO): SBD MOMSN=8562515
2018-09-22T19:50:01.222Z,1537645801.222 [DataOverHttps](INFO): Sending 1613 bytes from file Logs/20180922T190757/Express0016.lzma
2018-09-22T19:50:02.394Z,1537645802.394 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0016.lzma.bak
2018-09-22T19:50:02.394Z,1537645802.394 [DataOverHttps](INFO): SBD MOMSN=8562519
2018-09-22T19:50:02.904Z,1537645802.904 [Default:CheckIn:Read_Iridium] Stopped
2018-09-22T19:50:02.904Z,1537645802.904 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-22T19:50:02.904Z,1537645802.904 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-22T19:50:18.330Z,1537645818.330 [NAL9602](INFO): Powering down
2018-09-22T19:55:03.517Z,1537646103.517 [Default:CheckIn:C.Wait](INFO): Done Waiting.
2018-09-22T19:55:03.518Z,1537646103.518 [Default:CheckIn:C.Wait] Stopped
2018-09-22T19:55:03.518Z,1537646103.518 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-22T19:55:03.518Z,1537646103.518 [Default:CheckIn:D] Running Loop=1
2018-09-22T19:55:03.858Z,1537646103.858 [Default:CheckIn:D] Stopped
2018-09-22T19:55:03.858Z,1537646103.858 [Default:CheckIn:E] Running Loop=1
2018-09-22T19:55:04.276Z,1537646104.276 [Default:CheckIn:E](IMPORTANT): Default mission has been running for 8.885511 min 
2018-09-22T19:55:04.281Z,1537646104.281 [Default:CheckIn:E] Stopped
2018-09-22T19:55:04.281Z,1537646104.281 [Default:CheckIn](INFO): Completed Default:CheckIn
2018-09-22T19:55:04.282Z,1537646104.282 [Default:CheckIn] Stopped
2018-09-22T19:55:04.282Z,1537646104.282 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-22T19:55:04.282Z,1537646104.282 [Default:CheckIn](INFO): Running loop #2
2018-09-22T19:55:04.283Z,1537646104.283 [Default:CheckIn] Running Loop=2
2018-09-22T19:55:04.283Z,1537646104.283 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-22T19:55:04.283Z,1537646104.283 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-22T19:55:05.054Z,1537646105.054 [NAL9602](INFO): Powering up
2018-09-22T19:55:15.946Z,1537646115.946 [NAL9602](INFO): NAL9602 initialized
2018-09-22T19:55:29.144Z,1537646129.144 [NAL9602](INFO): SBD MO Status=0, MOMSN=1138, MT Status=0, MTMSN=0
2018-09-22T19:55:29.144Z,1537646129.144 [NAL9602](INFO): No messages in MT queue
2018-09-22T20:00:04.447Z,1537646404.447 [Default:CheckIn:Read_GPS](INFO): Timed out from 2018-09-22T19:55:04.3Z
2018-09-22T20:00:04.447Z,1537646404.447 [Default:CheckIn:Read_GPS] Stopped
2018-09-22T20:00:04.447Z,1537646404.447 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-22T20:00:08.971Z,1537646408.971 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180922T190757/Courier0018.lzma
2018-09-22T20:00:10.165Z,1537646410.165 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0018.lzma.bak
2018-09-22T20:00:10.165Z,1537646410.165 [DataOverHttps](INFO): SBD MOMSN=8562574
2018-09-22T20:00:22.458Z,1537646422.458 [DataOverHttps](INFO): Sending 152 bytes from file Logs/20180922T190757/Express0019.lzma
2018-09-22T20:00:23.253Z,1537646423.253 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0019.lzma.bak
2018-09-22T20:00:23.254Z,1537646423.254 [DataOverHttps](INFO): SBD MOMSN=8562576
2018-09-22T20:00:23.767Z,1537646423.767 [Default:CheckIn:Read_Iridium] Stopped
2018-09-22T20:00:23.767Z,1537646423.767 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-22T20:00:23.767Z,1537646423.767 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-22T20:00:34.986Z,1537646434.986 [NAL9602](INFO): Powering down
2018-09-22T20:02:55.331Z,1537646575.331 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-22T20:02:55.332Z,1537646575.332 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-3278,-32768,V
2018-09-22T20:03:28.688Z,1537646608.688 [DataOverHttps](IMPORTANT): SBD MTMSN=20180922T200318
2018-09-22T20:03:32.866Z,1537646612.866 [DataOverHttps](INFO): Received command:failComponent
2018-09-22T20:03:32.957Z,1537646612.957 [CommandLine](IMPORTANT): got command failComponent
2018-09-22T20:03:32.957Z,1537646612.957 [CommandLine](IMPORTANT): Failed components:
2018-09-22T20:03:32.958Z,1537646612.958 [CommandLine](IMPORTANT): No failed Components.
2018-09-22T20:05:24.287Z,1537646724.287 [Default:CheckIn:C.Wait](INFO): Done Waiting.
2018-09-22T20:05:24.288Z,1537646724.288 [Default:CheckIn:C.Wait] Stopped
2018-09-22T20:05:24.288Z,1537646724.288 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-22T20:05:24.288Z,1537646724.288 [Default:CheckIn:D] Running Loop=1
2018-09-22T20:05:24.696Z,1537646724.696 [Default:CheckIn:D] Stopped
2018-09-22T20:05:24.696Z,1537646724.696 [Default:CheckIn:E] Running Loop=1
2018-09-22T20:05:25.089Z,1537646725.089 [Default:CheckIn:E](IMPORTANT): Default mission has been running for 19.232827 min 
2018-09-22T20:05:25.093Z,1537646725.093 [Default:CheckIn:E] Stopped
2018-09-22T20:05:25.093Z,1537646725.093 [Default:CheckIn](INFO): Completed Default:CheckIn
2018-09-22T20:05:25.093Z,1537646725.093 [Default:CheckIn] Stopped
2018-09-22T20:05:25.093Z,1537646725.093 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-22T20:05:25.094Z,1537646725.094 [Default:CheckIn](INFO): Running loop #3
2018-09-22T20:05:25.094Z,1537646725.094 [Default:CheckIn] Running Loop=3
2018-09-22T20:05:25.094Z,1537646725.094 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-22T20:05:25.094Z,1537646725.094 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-22T20:05:25.842Z,1537646725.842 [NAL9602](INFO): Powering up
2018-09-22T20:05:36.810Z,1537646736.810 [NAL9602](INFO): NAL9602 initialized
2018-09-22T20:05:37.610Z,1537646737.610 [NAL9602](FAULT): GPS failed to acquire within timeout.
2018-09-22T20:05:37.611Z,1537646737.611 [NAL9602] Data Fault, FailCount= 1
2018-09-22T20:05:37.611Z,1537646737.611 [NAL9602](ERROR): Data Fault
2018-09-22T20:05:37.710Z,1537646737.710 [CBIT](ERROR): Data Fault in component: NAL9602
2018-09-22T20:05:38.010Z,1537646738.010 [NAL9602](INFO): Powering down
2018-09-22T20:05:38.898Z,1537646738.898 [CBIT](INFO): Clearing failed state for component NAL9602
2018-09-22T20:05:38.898Z,1537646738.898 [NAL9602] No Fault, FailCount= 1
2018-09-22T20:06:08.418Z,1537646768.418 [NAL9602](INFO): Powering up NAL9602
2018-09-22T20:06:19.618Z,1537646779.618 [NAL9602](INFO): NAL9602 initialized
2018-09-22T20:06:49.768Z,1537646809.768 [NAL9602](INFO): SBD MO Status=0, MOMSN=1139, MT Status=0, MTMSN=0
2018-09-22T20:06:49.768Z,1537646809.768 [NAL9602](INFO): No messages in MT queue
2018-09-22T20:10:25.461Z,1537647025.461 [Default:CheckIn:Read_GPS](INFO): Timed out from 2018-09-22T20:05:25.1Z
2018-09-22T20:10:25.461Z,1537647025.461 [Default:CheckIn:Read_GPS] Stopped
2018-09-22T20:10:25.461Z,1537647025.461 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-22T20:10:31.500Z,1537647031.500 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180922T190757/Courier0021.lzma
2018-09-22T20:10:33.497Z,1537647033.497 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0021.lzma.bak
2018-09-22T20:10:33.497Z,1537647033.497 [DataOverHttps](INFO): SBD MOMSN=8562615
2018-09-22T20:10:43.382Z,1537647043.382 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180922T190757/Courier0024.lzma
2018-09-22T20:10:44.154Z,1537647044.154 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0024.lzma.bak
2018-09-22T20:10:44.154Z,1537647044.154 [DataOverHttps](INFO): SBD MOMSN=8562617
2018-09-22T20:10:53.610Z,1537647053.610 [DataOverHttps](INFO): Sending 268 bytes from file Logs/20180922T190757/Express0022.lzma
2018-09-22T20:10:54.397Z,1537647054.397 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0022.lzma.bak
2018-09-22T20:10:54.397Z,1537647054.397 [DataOverHttps](INFO): SBD MOMSN=8562619
2018-09-22T20:10:58.430Z,1537647058.430 [NAL9602](INFO): Powering down
2018-09-22T20:11:05.463Z,1537647065.463 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180922T190757/Express0025.lzma
2018-09-22T20:11:06.259Z,1537647066.259 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0025.lzma.bak
2018-09-22T20:11:06.259Z,1537647066.259 [DataOverHttps](INFO): SBD MOMSN=8562627
2018-09-22T20:11:06.771Z,1537647066.771 [Default:CheckIn:Read_Iridium] Stopped
2018-09-22T20:11:06.771Z,1537647066.771 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-22T20:11:06.771Z,1537647066.771 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-22T20:15:11.507Z,1537647311.507 [DataOverHttps](IMPORTANT): SBD MTMSN=20180922T201501
2018-09-22T20:15:11.939Z,1537647311.939 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-32768,V
2018-09-22T20:15:16.075Z,1537647316.075 [DataOverHttps](INFO): Received command:load Science/sci2.xml;set sci2.MissionTimeout 1 hour;set sci2.NeedCommsTime 45 minute;set sci2.Lat1 36.8342 degree;set sci2.Lon1 -121.898 angular_degree;set sci2.YoYoMaxDepth 30 meter;set sci2.MaxDepth 35 meter;run 
2018-09-22T20:15:16.099Z,1537647316.099 [CommandLine](IMPORTANT): got command load ./Missions/Science/sci2.xml
2018-09-22T20:15:16.099Z,1537647316.099 [MissionManager](INFO): Loading Mission: ./Missions/Science/sci2.xml
2018-09-22T20:15:16.244Z,1537647316.244 [MissionManager](INFO): DefineArg sci2.MissionTimeout = 2.000000 h
2018-09-22T20:15:16.246Z,1537647316.246 [MissionManager](INFO): DefineArg sci2.NeedCommsTime = 60.000000 min
2018-09-22T20:15:16.248Z,1537647316.248 [MissionManager](INFO): DefineArg sci2.Repeat = 1.000000 count
2018-09-22T20:15:16.250Z,1537647316.250 [MissionManager](INFO): DefineArg sci2.Lat1 = nan arcdeg
2018-09-22T20:15:16.255Z,1537647316.255 [MissionManager](INFO): DefineArg sci2.Lon1 = nan arcdeg
2018-09-22T20:15:16.258Z,1537647316.258 [MissionManager](INFO): DefineArg sci2.Lat2 = nan arcdeg
2018-09-22T20:15:16.260Z,1537647316.260 [MissionManager](INFO): DefineArg sci2.Lon2 = nan arcdeg
2018-09-22T20:15:16.262Z,1537647316.262 [MissionManager](INFO): DefineArg sci2.Lat3 = nan arcdeg
2018-09-22T20:15:16.264Z,1537647316.264 [MissionManager](INFO): DefineArg sci2.Lon3 = nan arcdeg
2018-09-22T20:15:16.266Z,1537647316.266 [MissionManager](INFO): DefineArg sci2.Lat4 = nan arcdeg
2018-09-22T20:15:16.269Z,1537647316.269 [MissionManager](INFO): DefineArg sci2.Lon4 = nan arcdeg
2018-09-22T20:15:16.273Z,1537647316.273 [MissionManager](INFO): DefineArg sci2.Lat5 = nan arcdeg
2018-09-22T20:15:16.313Z,1537647316.313 [MissionManager](INFO): DefineArg sci2.Lon5 = nan arcdeg
2018-09-22T20:15:16.315Z,1537647316.315 [MissionManager](INFO): DefineArg sci2.Lat6 = nan arcdeg
2018-09-22T20:15:16.317Z,1537647316.317 [MissionManager](INFO): DefineArg sci2.Lon6 = nan arcdeg
2018-09-22T20:15:16.319Z,1537647316.319 [MissionManager](INFO): DefineArg sci2.Lat7 = nan arcdeg
2018-09-22T20:15:16.321Z,1537647316.321 [MissionManager](INFO): DefineArg sci2.Lon7 = nan arcdeg
2018-09-22T20:15:16.323Z,1537647316.323 [MissionManager](INFO): DefineArg sci2.Speed = 1.000000 m/s
2018-09-22T20:15:16.338Z,1537647316.338 [MissionManager](INFO): DefineArg sci2.YoYoMinDepth = 2.000000 m
2018-09-22T20:15:16.340Z,1537647316.340 [MissionManager](INFO): DefineArg sci2.YoYoMaxDepth = 200.000000 m
2018-09-22T20:15:16.342Z,1537647316.342 [MissionManager](INFO): DefineArg sci2.YoYoMinAltitude = 9.000000 m
2018-09-22T20:15:16.344Z,1537647316.344 [MissionManager](INFO): DefineArg sci2.YoYoUpPitch = 20.000000 arcdeg
2018-09-22T20:15:16.347Z,1537647316.347 [MissionManager](INFO): DefineArg sci2.YoYoDownPitch = -20.000000 arcdeg
2018-09-22T20:15:16.364Z,1537647316.364 [MissionManager](INFO): DefineArg sci2.BuoyancyNeutral = 205.000004 cc
2018-09-22T20:15:16.366Z,1537647316.366 [MissionManager](INFO): DefineArg sci2.MassDefault = 0.000000 cm
2018-09-22T20:15:16.369Z,1537647316.369 [MissionManager](INFO): DefineArg sci2.MinAltitude = 5.000000 m
2018-09-22T20:15:16.371Z,1537647316.371 [MissionManager](INFO): DefineArg sci2.MaxDepth = 205.000000 m
2018-09-22T20:15:16.388Z,1537647316.388 [MissionManager](INFO): DefineArg sci2.MinOffshore = 2.000000 km
2018-09-22T20:15:16.389Z,1537647316.389 [MissionManager](INFO): Inserting Stack: Missions/Insert/Science.xml
2018-09-22T20:15:16.608Z,1537647316.608 [MissionManager](INFO): DefineArg sci2:Science.SampleISUS = 0 bool
2018-09-22T20:15:16.611Z,1537647316.611 [MissionManager](INFO): DefineArg sci2:Science.SampleISUSmaxPitch = 60.000000 arcdeg
2018-09-22T20:15:16.656Z,1537647316.656 [MissionManager](INFO): DefineArg sci2:Science.SampleISUSminPitch = -60.000000 arcdeg
2018-09-22T20:15:16.658Z,1537647316.658 [MissionManager](INFO): DefineArg sci2:Science.PeakDetectChlActive = 0 bool
2018-09-22T20:15:16.660Z,1537647316.660 [MissionManager](INFO): DefineArg sci2:Science.HighestChlPeakReportActive = 0 bool
2018-09-22T20:15:16.662Z,1537647316.662 [MissionManager](INFO): DefineArg sci2:Science.PatchTracking = 1 bool
2018-09-22T20:15:16.664Z,1537647316.664 [MissionManager](INFO): DefineArg sci2:Science.FilterWidthHorizontal = 3.000000 count
2018-09-22T20:15:16.675Z,1537647316.675 [MissionManager](INFO): DefineArg sci2:Science.NumProfilesSlidingwindow = 100.000000 count
2018-09-22T20:15:16.678Z,1537647316.678 [MissionManager](INFO): DefineArg sci2:Science.OffPeakFractionHorizontal = 80.000000 %
2018-09-22T20:15:16.680Z,1537647316.680 [MissionManager](INFO): DefineArg sci2:Science.PeakDetectNO3Active = 0 bool
2018-09-22T20:15:16.682Z,1537647316.682 [MissionManager](INFO): DefineArg sci2:Science.PeakDetectOilActive = 0 bool
2018-09-22T20:15:16.684Z,1537647316.684 [MissionManager](INFO): DefineArg sci2:Science.UpwardDerivativeOfTemperatureActive = 0 bool
2018-09-22T20:15:16.686Z,1537647316.686 [MissionManager](INFO): DefineArg sci2:Science.EnabledAanderaaO2 = 0.000000 bool
2018-09-22T20:15:16.689Z,1537647316.689 [MissionManager](INFO): DefineArg sci2:Science.EnabledNeilBrown = 0.000000 bool
2018-09-22T20:15:16.691Z,1537647316.691 [MissionManager](INFO): DefineArg sci2:Science.EnabledSeabird = 0.000000 bool
2018-09-22T20:15:16.693Z,1537647316.693 [MissionManager](INFO): DefineArg sci2:Science.EnabledTurbulence_NPS = 0.000000 bool
2018-09-22T20:15:16.696Z,1537647316.696 [MissionManager](INFO): DefineArg sci2:Science.EnabledWetLabsBB2FL = 0.000000 bool
2018-09-22T20:15:16.716Z,1537647316.716 [MissionManager](INFO): DefineArg sci2:Science.EnabledWetLabsSeaOWL_UV_A = 1.000000 bool
2018-09-22T20:15:16.726Z,1537647316.726 [MissionManager](INFO): DefineArg sci2:Science.EnabledISUS = 0.000000 bool
2018-09-22T20:15:16.728Z,1537647316.728 [MissionManager](INFO): DefineArg sci2:Science.LowPassWindowLength = 20.000000 count
2018-09-22T20:15:16.736Z,1537647316.736 [MissionManager](INFO): DefineArg sci2:Science.PeakChlShallowBound = 10.000000 m
2018-09-22T20:15:16.738Z,1537647316.738 [MissionManager](INFO): DefineArg sci2:Science.PeakChlDeepBound = 20.000000 m
2018-09-22T20:15:16.740Z,1537647316.740 [MissionManager](INFO): DefineOutput sci2:Science.PeakChl = 0.000000 ug/l
2018-09-22T20:15:16.743Z,1537647316.743 [MissionManager](INFO): DefineOutput sci2:Science.PeakChlDepth = 0.000000 m
2018-09-22T20:15:16.765Z,1537647316.765 [MissionManager](INFO): DefineOutput sci2:Science.PeakChlTemperature = 0.000000 degC
2018-09-22T20:15:16.768Z,1537647316.768 [MissionManager](INFO): DefineOutput sci2:Science.PeakChlLatitude = nan arcdeg
2018-09-22T20:15:16.770Z,1537647316.770 [MissionManager](INFO): DefineOutput sci2:Science.PeakChlLongitude = nan arcdeg
2018-09-22T20:15:16.772Z,1537647316.772 [MissionManager](INFO): DefineOutput sci2:Science.PeakNO3 = 0.000000 umol/l
2018-09-22T20:15:16.774Z,1537647316.774 [MissionManager](INFO): DefineOutput sci2:Science.PeakNO3Depth = 0.000000 m
2018-09-22T20:15:16.786Z,1537647316.786 [MissionManager](INFO): DefineOutput sci2:Science.PeakNO3Latitude = nan arcdeg
2018-09-22T20:15:16.789Z,1537647316.789 [MissionManager](INFO): DefineOutput sci2:Science.PeakNO3Longitude = nan arcdeg
2018-09-22T20:15:16.791Z,1537647316.791 [MissionManager](INFO): DefineOutput sci2:Science.PatchChl = 0.000000 m
2018-09-22T20:15:16.793Z,1537647316.793 [MissionManager](INFO): DefineOutput sci2:Science.PatchChlDepth = 0.000000 m
2018-09-22T20:15:16.796Z,1537647316.796 [MissionManager](INFO): DefineOutput sci2:Science.PatchChlLatitude = nan arcdeg
2018-09-22T20:15:16.813Z,1537647316.813 [MissionManager](INFO): DefineOutput sci2:Science.PatchChlLongitude = nan arcdeg
2018-09-22T20:15:16.816Z,1537647316.816 [MissionManager](INFO): DefineOutput sci2:Science.PatchChlDistance = nan m
2018-09-22T20:15:16.818Z,1537647316.818 [MissionManager](INFO): DefineOutput sci2:Science.PeakOil = 0.000000 kg/m3
2018-09-22T20:15:16.820Z,1537647316.820 [MissionManager](INFO): DefineOutput sci2:Science.PeakOilDepth = 0.000000 m
2018-09-22T20:15:16.837Z,1537647316.837 [MissionManager](INFO): DefineOutput sci2:Science.PeakOilLatitude = nan arcdeg
2018-09-22T20:15:16.840Z,1537647316.840 [MissionManager](INFO): DefineOutput sci2:Science.PeakOilLongitude = nan arcdeg
2018-09-22T20:15:16.884Z,1537647316.884 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-22T20:15:16.909Z,1537647316.909 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-22T20:15:16.934Z,1537647316.934 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-22T20:15:16.953Z,1537647316.953 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-22T20:15:16.981Z,1537647316.981 [MissionManager](INFO): RedefineArg sci2:Science.SampleISUS = value:1 bool
2018-09-22T20:15:16.983Z,1537647316.983 [MissionManager](INFO): RedefineArg sci2:Science.PeakDetectChlActive = value:1 bool
2018-09-22T20:15:16.983Z,1537647316.983 [MissionManager](INFO): Inserting Stack: Missions/Insert/NeedComms.xml
2018-09-22T20:15:17.081Z,1537647317.081 [MissionManager](INFO): DefineArg sci2:NeedComms.DiveInterval = 3.000000 h
2018-09-22T20:15:17.083Z,1537647317.083 [MissionManager](INFO): DefineArg sci2:NeedComms.WaitForPitchUp = 10.000000 min
2018-09-22T20:15:17.086Z,1537647317.086 [MissionManager](INFO): DefineArg sci2:NeedComms.SurfacePitch = 20.000000 arcdeg
2018-09-22T20:15:17.088Z,1537647317.088 [MissionManager](INFO): DefineArg sci2:NeedComms.SurfaceDepthRate = nan m/s
2018-09-22T20:15:17.090Z,1537647317.090 [MissionManager](INFO): DefineArg sci2:NeedComms.SurfaceSpeed = 1.000000 m/s
2018-09-22T20:15:17.092Z,1537647317.092 [MissionManager](INFO): DefineArg sci2:NeedComms.GPSTimeout = 7.000000 min
2018-09-22T20:15:17.095Z,1537647317.095 [MissionManager](INFO): DefineArg sci2:NeedComms.CommsTimeout = 30.000000 min
2018-09-22T20:15:17.100Z,1537647317.100 [sci2:NeedComms:B.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-22T20:15:17.115Z,1537647317.115 [MissionManager](INFO): Inserting Stack: Missions/Insert/StandardEnvelopes.xml
2018-09-22T20:15:17.173Z,1537647317.173 [MissionManager](INFO): DefineArg sci2:StandardEnvelopes.MinAltitude = 5.000000 m
2018-09-22T20:15:17.175Z,1537647317.175 [MissionManager](INFO): DefineArg sci2:StandardEnvelopes.MaxDepth = 200.000000 m
2018-09-22T20:15:17.187Z,1537647317.187 [MissionManager](INFO): DefineArg sci2:StandardEnvelopes.MinOffshore = 2000.000000 m
2018-09-22T20:15:17.188Z,1537647317.188 [sci2:StandardEnvelopes:A.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-22T20:15:17.193Z,1537647317.193 [sci2:StandardEnvelopes:B.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-22T20:15:17.208Z,1537647317.208 [sci2:StandardEnvelopes:C.OffshoreEnvelope](DEBUG): Construct OffshoreEnvelope.
2018-09-22T20:15:17.217Z,1537647317.217 [sci2:I.Pitch](DEBUG): Construct.
2018-09-22T20:15:17.221Z,1537647317.221 [sci2:J.Buoyancy](DEBUG): Construct Buoyancy.
2018-09-22T20:15:17.223Z,1537647317.223 [sci2:K.SetSpeed](DEBUG): Construct.
2018-09-22T20:15:17.235Z,1537647317.235 [sci2:L.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-22T20:15:17.242Z,1537647317.242 [sci2:M.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-22T20:15:17.247Z,1537647317.247 [sci2:N.YoYo](DEBUG): Construct YoYo.
2018-09-22T20:15:17.254Z,1537647317.254 [sci2:Lap:Wpt1:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-22T20:15:17.259Z,1537647317.259 [sci2:Lap:Wpt2:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-22T20:15:17.264Z,1537647317.264 [sci2:Lap:Wpt3:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-22T20:15:17.269Z,1537647317.269 [sci2:Lap:Wpt4:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-22T20:15:17.273Z,1537647317.273 [sci2:Lap:Wpt5:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-22T20:15:17.298Z,1537647317.298 [sci2:Lap:Wpt6:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-22T20:15:17.308Z,1537647317.308 [sci2:Lap:Wpt7:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-22T20:15:17.355Z,1537647317.355 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<!-- ====================
     Generated by TethysL
     ==================== -->
<Mission xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xmlns="Tethys"
         xmlns:Units="Tethys/Units"
         xmlns:Control="Tethys/Control"
         xmlns:Guidance="Tethys/Guidance"
         xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                             Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                             Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                             Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd"
       Id="sci2">

    <Description>
        Vehicle yo-yo's to the specified waypoints, with science turned on.
    </Description>
    <DefineArg Name="MissionTimeout"><Description>
        Maximum duration of mission
    </Description><Units:hour/><Value>2</Value></DefineArg>

    <DefineArg Name="NeedCommsTime"><Description>
        How often to surface for commumications
    </Description><Units:minute/><Value>60</Value></DefineArg>

    <DefineArg Name="Repeat"><Description>
        Number of times the vehicle should try to cycle through waypoints..
    </Description><Units:count/><Value>1</Value></DefineArg>

    <DefineArg Name="Lat1"><Description>
        Latitude of waypoint 1. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon1"><Description>
        Longitude of waypoint 1. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat2"><Description>
        Latitude of waypoint 2. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon2"><Description>
        Longitude of waypoint 2. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat3"><Description>
        Latitude of waypoint 3. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon3"><Description>
        Longitude of waypoint 3. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat4"><Description>
        Latitude of waypoint 4. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon4"><Description>
        Longitude of waypoint 4. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat5"><Description>
        Latitude of waypoint 5. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon5"><Description>
        Longitude of waypoint 5. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat6"><Description>
        Latitude of waypoint 6. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon6"><Description>
        Longitude of waypoint 6. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat7"><Description>
        Latitude of waypoint 7. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon7"><Description>
        Longitude of waypoint 7. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Speed"><Description>
        Speed while performing the YoYo behavior.
    </Description><Units:meter_per_second/><Value>1</Value></DefineArg>

    <DefineArg Name="YoYoMinDepth"><Description>
        Minimum depth while performing the YoYo behavior.
    </Description><Units:meter/><Value>2</Value></DefineArg>

    <DefineArg Name="YoYoMaxDepth"><Description>
        Maximum depth while performing the YoYo behavior.
    </Description><Units:meter/><Value>200</Value></DefineArg>

    <DefineArg Name="YoYoMinAltitude"><Description>
        Minimum altitude while performing the YoYo behavior (for
        bottom-terminated YoYos).
    </Description><Units:meter/><Value>9</Value></DefineArg>

    <DefineArg Name="YoYoUpPitch"><Description>
        Vehicle up pitch while performing the YoYo behavior.
    </Description><Units:degree/><Value>20</Value></DefineArg>

    <DefineArg Name="YoYoDownPitch"><Description>
        Vehicle down pitch while performing the YoYo behavior.
    </Description><Units:degree/><Value>-20</Value></DefineArg>

    <DefineArg Name="BuoyancyNeutral"><Description>
        Buoyancy bladder position while performing the YoYo behavior. Defaults
        to buoyancyNeutral setting in the Config/Control.cfg file. Set to NaN cc
        for active buoyancy
    </Description><Control:VerticalControl.buoyancyNeutral/></DefineArg>

    <DefineArg Name="MassDefault"><Description>
        Static setting for mass during the mission. Set to NaN mm for active
        mass position
    </Description><Control:VerticalControl.massDefault/></DefineArg>

    <DefineArg Name="MinAltitude"><Description>
        Minimum height above the sea floor for the entire mission.
    </Description><Units:meter/><Value>5</Value></DefineArg>

    <DefineArg Name="MaxDepth"><Description>
        Maximum depth for the entire mission.
    </Description><Units:meter/><Value>205</Value></DefineArg>

    <DefineArg Name="MinOffshore"><Description>
        Minimum offshore distance for the entire mission.
    </Description><Units:kilometer/><Value>2</Value></DefineArg>
    <Timeout Duration="MissionTimeout"/>

    <Insert Filename="Insert/Science.xml">
        <Description>
            Most missions will run the science sensors. If you don't place this
            aggregate above NeedComms, science instruments get turned off on the
            last upcast and while floating on the surface.
        </Description>
        <RedefineArg Name="SampleISUS"><True/></RedefineArg>
        <RedefineArg Name="PeakDetectChlActive"><True/></RedefineArg>
    </Insert>

    <Insert Filename="Insert/NeedComms.xml" Id="NeedComms"/>

    <Assign><Sequence/><Arg Name="NeedComms:DiveInterval"/><Arg Name="NeedCommsTime"/></Assign>

    <Insert Filename="Insert/StandardEnvelopes.xml"/>

    <Assign><Sequence/><Arg Name="StandardEnvelopes:MinAltitude"/><Arg Name="MinAltitude"/></Assign>

    <Assign><Sequence/><Arg Name="StandardEnvelopes:MaxDepth"/><Arg Name="MaxDepth"/></Assign>

    <Assign><Sequence/><Arg Name="StandardEnvelopes:MinOffshore"/><Arg Name="MinOffshore"/></Assign>

    <Call Id="StartingMission" RefId="NeedComms"/>

    <Guidance:Pitch>
        <Parallel/>
        <Setting><Guidance:Pitch.massPosition/><Arg Name="MassDefault"/></Setting>
    </Guidance:Pitch>

    <Guidance:Buoyancy>
        <Parallel/>
        <Setting><Guidance:Buoyancy.position/><Arg Name="BuoyancyNeutral"/></Setting>
    </Guidance:Buoyancy>

    <Guidance:SetSpeed>
        <Parallel/>
        <Setting><Guidance:SetSpeed.speed/><Arg Name="Speed"/></Setting>
    </Guidance:SetSpeed>

    <Guidance:DepthEnvelope>
        <Description>
            Another depth envelope for the YoYo behavior. This envelope should
            fall within the limits of the standard safety envelopes in
            Insert/StandardEnvelopes.xml in order to avoid commanding high pitch
            angles for depth-terminated YoYos.
        </Description>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.minDepth/><Arg Name="YoYoMinDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="YoYoMaxDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:DepthEnvelope.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:DepthEnvelope>

    <Guidance:AltitudeEnvelope>
        <Description>
            Another altitude envelope for the YoYo behavior. This envelope
            should fall within the limits of the standard safety envelopes in
            Insert/StandardEnvelopes.xml in order to avoid commanding high pitch
            angles for bottom-terminated YoYos.
        </Description>
        <Parallel/>
        <Setting><Guidance:AltitudeEnvelope.minAltitude/><Arg Name="YoYoMinAltitude"/></Setting>
        <Setting><Guidance:AltitudeEnvelope.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:AltitudeEnvelope>

    <Guidance:YoYo>
        <Parallel/>
        <Setting><Guidance:YoYo.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:YoYo.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:YoYo>

    <Aggregate Id="Lap">
        <Sequence Repeat="Repeat"/>

        <Aggregate Id="Wpt1">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat1"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon1"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt2">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat2"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon2"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt3">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat3"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon3"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt4">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat4"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon4"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt5">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat5"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon5"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt6">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat6"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon6"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt7">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat7"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon7"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>
    </Aggregate>
</Mission>

2018-09-22T20:15:17.356Z,1537647317.356 [CommandLine](IMPORTANT): Loaded ./Missions/Science/sci2.xml
2018-09-22T20:15:24.684Z,1537647324.684 [CommandLine](IMPORTANT): got command set sci2.MissionTimeout 1.000000 hour
2018-09-22T20:15:24.685Z,1537647324.685 [CommandLine](IMPORTANT): got command set sci2.NeedCommsTime 45.000000 minute
2018-09-22T20:15:24.686Z,1537647324.686 [CommandLine](IMPORTANT): got command set sci2.Lat1 36.834202 degree
2018-09-22T20:15:24.687Z,1537647324.687 [CommandLine](IMPORTANT): got command set sci2.Lon1 -121.898003 angular_degree
2018-09-22T20:15:24.688Z,1537647324.688 [CommandLine](IMPORTANT): got command set sci2.YoYoMaxDepth 30.000000 meter
2018-09-22T20:15:24.689Z,1537647324.689 [CommandLine](IMPORTANT): got command set sci2.MaxDepth 35.000000 meter
2018-09-22T20:15:24.690Z,1537647324.690 [CommandLine](IMPORTANT): got command run 
2018-09-22T20:15:24.691Z,1537647324.691 [CommandLine](IMPORTANT): Running 
2018-09-22T20:15:24.881Z,1537647324.881 [Default] Stopped
2018-09-22T20:15:24.881Z,1537647324.881 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-22T20:15:24.881Z,1537647324.881 [Default:B.GoToSurface] Stopped
2018-09-22T20:15:24.881Z,1537647324.881 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-22T20:15:24.881Z,1537647324.881 [Default:CheckIn] Stopped
2018-09-22T20:15:24.881Z,1537647324.881 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-22T20:15:24.881Z,1537647324.881 [Default:CheckIn:C.Wait] Stopped
2018-09-22T20:15:24.881Z,1537647324.881 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-22T20:15:24.882Z,1537647324.882 [MissionManager](IMPORTANT): Started mission sci2
2018-09-22T20:15:24.882Z,1537647324.882 [sci2] Running Loop=1
2018-09-22T20:15:24.882Z,1537647324.882 [sci2](DEBUG): Aggregate::initialize sci2
2018-09-22T20:15:24.882Z,1537647324.882 [sci2:Science] Running Loop=1
2018-09-22T20:15:24.882Z,1537647324.882 [sci2:Science](DEBUG): Aggregate::initialize sci2:Science
2018-09-22T20:15:24.882Z,1537647324.882 [sci2:Science:A] Running Loop=1
2018-09-22T20:15:24.882Z,1537647324.882 [sci2:Science:B] Running Loop=1
2018-09-22T20:15:24.883Z,1537647324.883 [sci2:Science:C] Running Loop=1
2018-09-22T20:15:24.883Z,1537647324.883 [sci2:Science:D] Running Loop=1
2018-09-22T20:15:24.883Z,1537647324.883 [sci2:Science:E] Running Loop=1
2018-09-22T20:15:24.883Z,1537647324.883 [sci2:Science:F] Running Loop=1
2018-09-22T20:15:24.883Z,1537647324.883 [sci2:Science:G] Running Loop=1
2018-09-22T20:15:24.883Z,1537647324.883 [sci2:Science:Read_Oil] Running Loop=1
2018-09-22T20:15:24.883Z,1537647324.883 [sci2:Science:PeakDetectChl] Running Loop=1
2018-09-22T20:15:24.883Z,1537647324.883 [sci2:Science:PeakDetectChl](DEBUG): Aggregate::initialize sci2:Science:PeakDetectChl
2018-09-22T20:15:24.883Z,1537647324.883 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2018-09-22T20:15:24.883Z,1537647324.883 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-22T20:15:24.884Z,1537647324.884 [sci2:Science:HighestChlPeakReport] Running Loop=1
2018-09-22T20:15:24.885Z,1537647324.885 [sci2:Science:HighestChlPeakReport](DEBUG): Aggregate::initialize sci2:Science:HighestChlPeakReport
2018-09-22T20:15:24.885Z,1537647324.885 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2018-09-22T20:15:24.885Z,1537647324.885 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2018-09-22T20:15:24.886Z,1537647324.886 [sci2:Science:PeakDetectNO3] Running Loop=1
2018-09-22T20:15:24.886Z,1537647324.886 [sci2:Science:PeakDetectNO3](DEBUG): Aggregate::initialize sci2:Science:PeakDetectNO3
2018-09-22T20:15:24.886Z,1537647324.886 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2018-09-22T20:15:24.886Z,1537647324.886 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-22T20:15:24.887Z,1537647324.887 [sci2:Science:PeakDetectOil] Running Loop=1
2018-09-22T20:15:24.887Z,1537647324.887 [sci2:Science:PeakDetectOil](DEBUG): Aggregate::initialize sci2:Science:PeakDetectOil
2018-09-22T20:15:24.887Z,1537647324.887 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2018-09-22T20:15:24.887Z,1537647324.887 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-22T20:15:24.888Z,1537647324.888 [sci2:StandardEnvelopes] Running Loop=1
2018-09-22T20:15:24.889Z,1537647324.889 [sci2:StandardEnvelopes](DEBUG): Aggregate::initialize sci2:StandardEnvelopes
2018-09-22T20:15:24.889Z,1537647324.889 [sci2:StandardEnvelopes:A.AltitudeEnvelope] Running Loop=1
2018-09-22T20:15:24.889Z,1537647324.889 [sci2:StandardEnvelopes:A.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-22T20:15:24.889Z,1537647324.889 [sci2:StandardEnvelopes:B.DepthEnvelope] Running Loop=1
2018-09-22T20:15:24.889Z,1537647324.889 [sci2:StandardEnvelopes:B.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-22T20:15:24.890Z,1537647324.890 [sci2:StandardEnvelopes:C.OffshoreEnvelope] Running Loop=1
2018-09-22T20:15:24.890Z,1537647324.890 [sci2:StandardEnvelopes:C.OffshoreEnvelope](DEBUG): Initialize OffshoreEnvelopeComponent.
2018-09-22T20:15:24.890Z,1537647324.890 [sci2:I.Pitch] Running Loop=1
2018-09-22T20:15:24.890Z,1537647324.890 [sci2:I.Pitch](DEBUG): Initialize.
2018-09-22T20:15:24.890Z,1537647324.890 [sci2:J.Buoyancy] Running Loop=1
2018-09-22T20:15:24.890Z,1537647324.890 [sci2:J.Buoyancy](DEBUG): Initialize Buoyancy Component.
2018-09-22T20:15:24.890Z,1537647324.890 [sci2:K.SetSpeed] Running Loop=1
2018-09-22T20:15:24.890Z,1537647324.890 [sci2:K.SetSpeed](DEBUG): Initialize.
2018-09-22T20:15:24.890Z,1537647324.890 [sci2:L.DepthEnvelope] Running Loop=1
2018-09-22T20:15:24.891Z,1537647324.891 [sci2:L.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-22T20:15:24.891Z,1537647324.891 [sci2:M.AltitudeEnvelope] Running Loop=1
2018-09-22T20:15:24.891Z,1537647324.891 [sci2:M.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-22T20:15:24.891Z,1537647324.891 [sci2:N.YoYo] Running Loop=1
2018-09-22T20:15:24.891Z,1537647324.891 [sci2:N.YoYo](DEBUG): Initialize YoYoComponent.
2018-09-22T20:15:24.891Z,1537647324.891 [sci2:C] Running Loop=1
2018-09-22T20:15:24.892Z,1537647324.892 [sci2:N.YoYo] Running Loop=1
2018-09-22T20:15:24.913Z,1537647324.913 [sci2:M.AltitudeEnvelope] Running Loop=1
2018-09-22T20:15:24.914Z,1537647324.914 [sci2:L.DepthEnvelope] Running Loop=1
2018-09-22T20:15:24.916Z,1537647324.916 [sci2:K.SetSpeed] Running Loop=1
2018-09-22T20:15:24.917Z,1537647324.917 [sci2:J.Buoyancy] Running Loop=1
2018-09-22T20:15:24.918Z,1537647324.918 [sci2:I.Pitch] Running Loop=1
2018-09-22T20:15:24.919Z,1537647324.919 [sci2:StandardEnvelopes] Running Loop=1
2018-09-22T20:15:24.919Z,1537647324.919 [sci2:StandardEnvelopes:C.OffshoreEnvelope] Running Loop=1
2018-09-22T20:15:24.920Z,1537647324.920 [sci2:StandardEnvelopes:B.DepthEnvelope] Running Loop=1
2018-09-22T20:15:24.922Z,1537647324.922 [sci2:StandardEnvelopes:A.AltitudeEnvelope] Running Loop=1
2018-09-22T20:15:24.924Z,1537647324.924 [sci2:C] Stopped
2018-09-22T20:15:24.924Z,1537647324.924 [sci2:E] Running Loop=1
2018-09-22T20:15:24.924Z,1537647324.924 [sci2:Science] Running Loop=1
2018-09-22T20:15:24.927Z,1537647324.927 [sci2:Science:PeakDetectOil] Stopped
2018-09-22T20:15:24.927Z,1537647324.927 [sci2:Science:PeakDetectOil](DEBUG): Aggregate::uninitialize sci2:Science:PeakDetectOil
2018-09-22T20:15:24.927Z,1537647324.927 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2018-09-22T20:15:24.927Z,1537647324.927 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-22T20:15:24.927Z,1537647324.927 [sci2:Science:PeakDetectNO3] Stopped
2018-09-22T20:15:24.927Z,1537647324.927 [sci2:Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize sci2:Science:PeakDetectNO3
2018-09-22T20:15:24.928Z,1537647324.928 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2018-09-22T20:15:24.928Z,1537647324.928 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-22T20:15:24.928Z,1537647324.928 [sci2:Science:HighestChlPeakReport] Stopped
2018-09-22T20:15:24.928Z,1537647324.928 [sci2:Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize sci2:Science:HighestChlPeakReport
2018-09-22T20:15:24.928Z,1537647324.928 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2018-09-22T20:15:24.928Z,1537647324.928 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-22T20:15:24.928Z,1537647324.928 [sci2:Science:PeakDetectChl] Running Loop=1
2018-09-22T20:15:24.929Z,1537647324.929 [sci2:Science:Read_Oil] Running Loop=1
2018-09-22T20:15:24.930Z,1537647324.930 [sci2:Science:Read_Oil](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-22T20:15:24.931Z,1537647324.931 [sci2:Science:G] Running Loop=1
2018-09-22T20:15:24.931Z,1537647324.931 [sci2:Science:G](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-22T20:15:24.932Z,1537647324.932 [sci2:Science:F] Stopped
2018-09-22T20:15:24.932Z,1537647324.932 [sci2:Science:E] Stopped
2018-09-22T20:15:24.932Z,1537647324.932 [sci2:Science:D] Stopped
2018-09-22T20:15:24.932Z,1537647324.932 [sci2:Science:C] Stopped
2018-09-22T20:15:24.932Z,1537647324.932 [sci2:Science:B] Stopped
2018-09-22T20:15:24.932Z,1537647324.932 [sci2:Science:A] Stopped
2018-09-22T20:15:25.021Z,1537647325.021 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-22T20:15:25.023Z,1537647325.023 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-22T20:15:25.069Z,1537647325.069 [sci2:E] Stopped
2018-09-22T20:15:25.070Z,1537647325.070 [sci2:F] Running Loop=1
2018-09-22T20:15:25.463Z,1537647325.463 [sci2:F] Stopped
2018-09-22T20:15:25.463Z,1537647325.463 [sci2:G] Running Loop=1
2018-09-22T20:15:25.785Z,1537647325.785 [ThrusterServo](ERROR): Thruster uart error: serial timeout
2018-09-22T20:15:25.785Z,1537647325.785 [ThrusterServo] Communications Fault, FailCount= 1
2018-09-22T20:15:25.785Z,1537647325.785 [ThrusterServo](ERROR): Communications Fault
2018-09-22T20:15:25.789Z,1537647325.789 [CBIT](ERROR): Communications Fault in component: ThrusterServo
2018-09-22T20:15:25.889Z,1537647325.889 [sci2:G] Stopped
2018-09-22T20:15:25.889Z,1537647325.889 [sci2:StartingMission] Running Loop=1
2018-09-22T20:15:25.889Z,1537647325.889 [sci2:StartingMission](DEBUG): Aggregate::initialize sci2:StartingMission
2018-09-22T20:15:25.931Z,1537647325.931 [ThrusterServo](DEBUG): Uninitialize Thruster Servo.
2018-09-22T20:15:25.931Z,1537647325.931 [ThrusterServo](INFO): Powering down
2018-09-22T20:15:26.313Z,1537647326.313 [sci2:NeedComms] Running Loop=1
2018-09-22T20:15:26.313Z,1537647326.313 [sci2:NeedComms](DEBUG): Aggregate::initialize sci2:NeedComms
2018-09-22T20:15:26.313Z,1537647326.313 [sci2:NeedComms:B.GoToSurface] Running Loop=1
2018-09-22T20:15:26.314Z,1537647326.314 [sci2:NeedComms:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-22T20:15:26.314Z,1537647326.314 [sci2:NeedComms:B.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-22T20:15:26.314Z,1537647326.314 [sci2:NeedComms:B.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-22T20:15:26.315Z,1537647326.315 [sci2:NeedComms:B.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-22T20:15:26.315Z,1537647326.315 [sci2:NeedComms:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-22T20:15:26.316Z,1537647326.316 [sci2:NeedComms:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-22T20:15:26.316Z,1537647326.316 [sci2:NeedComms:A] Running Loop=1
2018-09-22T20:15:26.322Z,1537647326.322 [sci2:NeedComms:A](INFO): last time_fix was: 1537645772.000000 second since 1970/01/01T00:00:00Z 
2018-09-22T20:15:26.323Z,1537647326.323 [sci2:NeedComms:A] Stopped
2018-09-22T20:15:26.700Z,1537647326.700 [sci2:NeedComms:C] Running Loop=1
2018-09-22T20:15:26.973Z,1537647326.973 [CBIT](INFO): Clearing failed state for component ThrusterServo
2018-09-22T20:15:26.973Z,1537647326.973 [ThrusterServo] No Fault, FailCount= 1
2018-09-22T20:15:27.099Z,1537647327.099 [sci2:NeedComms:C](DEBUG): Initialize ReadDataComponent to sense time_fix
2018-09-22T20:15:27.242Z,1537647327.242 [ThrusterServo](DEBUG): Initializing EZServoServo.
2018-09-22T20:15:27.243Z,1537647327.243 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2018-09-22T20:15:27.425Z,1537647327.425 [NAL9602](INFO): Powering up
2018-09-22T20:15:38.610Z,1537647338.610 [NAL9602](INFO): NAL9602 initialized
2018-09-22T20:15:54.224Z,1537647354.224 [NAL9602](INFO): SBD MO Status=0, MOMSN=1140, MT Status=0, MTMSN=0
2018-09-22T20:15:54.224Z,1537647354.224 [NAL9602](INFO): No messages in MT queue
2018-09-22T20:16:09.861Z,1537647369.861 [RDI_Pathfinder](ERROR): DVL uart error: serial timeout
2018-09-22T20:16:09.861Z,1537647369.861 [RDI_Pathfinder] Communications Fault, FailCount= 1
2018-09-22T20:16:09.861Z,1537647369.861 [RDI_Pathfinder](ERROR): Communications Fault
2018-09-22T20:16:09.861Z,1537647369.861 [RDI_Pathfinder](ERROR): Failed to parse:
2018-09-22T20:16:09.938Z,1537647369.938 [CBIT](ERROR): Communications Fault in component: RDI_Pathfinder
2018-09-22T20:16:10.333Z,1537647370.333 [RDI_Pathfinder](INFO): Powering down
2018-09-22T20:16:11.090Z,1537647371.090 [CBIT](INFO): Clearing failed state for component RDI_Pathfinder
2018-09-22T20:16:11.090Z,1537647371.090 [RDI_Pathfinder] No Fault, FailCount= 1
2018-09-22T20:16:23.218Z,1537647383.218 [NAL9602](FAULT): GPS failed to acquire within timeout.
2018-09-22T20:16:23.218Z,1537647383.218 [NAL9602] Data Fault, FailCount= 1
2018-09-22T20:16:23.218Z,1537647383.218 [NAL9602](ERROR): Data Fault
2018-09-22T20:16:23.311Z,1537647383.311 [CBIT](ERROR): Data Fault in component: NAL9602
2018-09-22T20:16:23.610Z,1537647383.610 [NAL9602](INFO): Powering down
2018-09-22T20:16:24.442Z,1537647384.442 [RDI_Pathfinder](ERROR): Failed to parse:Pathfinder
2018-09-22T20:16:24.503Z,1537647384.503 [CBIT](INFO): Clearing failed state for component NAL9602
2018-09-22T20:16:24.503Z,1537647384.503 [NAL9602] No Fault, FailCount= 1
2018-09-22T20:16:54.022Z,1537647414.022 [NAL9602](INFO): Powering up NAL9602
2018-09-22T20:17:05.213Z,1537647425.213 [NAL9602](INFO): NAL9602 initialized
2018-09-22T20:17:31.110Z,1537647451.110 [BPC1](INFO): Calculating totals. Valid battery stick count: 56. Valid reserve battery stick count: 6.
2018-09-22T20:19:41.744Z,1537647581.744 [NAL9602](INFO): GPS fix at 20180922T201931: (36.839504, -121.893209)
2018-09-22T20:19:41.840Z,1537647581.840 [sci2:NeedComms:C] Stopped
2018-09-22T20:19:41.840Z,1537647581.840 [sci2:NeedComms:D] Running Loop=1
2018-09-22T20:19:42.240Z,1537647582.240 [sci2:NeedComms:D](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-22T20:19:47.247Z,1537647587.247 [DataOverHttps](INFO): Sending 81 bytes from file Logs/20180922T190757/Courier0027.lzma
2018-09-22T20:19:48.841Z,1537647588.841 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0027.lzma.bak
2018-09-22T20:19:48.841Z,1537647588.841 [DataOverHttps](INFO): SBD MOMSN=8562666
2018-09-22T20:20:05.029Z,1537647605.029 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180922T190757/Courier0030.lzma
2018-09-22T20:20:06.631Z,1537647606.631 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0030.lzma.bak
2018-09-22T20:20:06.631Z,1537647606.631 [DataOverHttps](INFO): SBD MOMSN=8562669
2018-09-22T20:20:16.910Z,1537647616.910 [NAL9602](INFO): Powering down
2018-09-22T20:20:23.210Z,1537647623.210 [DataOverHttps](INFO): Sending 544 bytes from file Logs/20180922T190757/Express0028.lzma
2018-09-22T20:20:23.977Z,1537647623.977 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0028.lzma.bak
2018-09-22T20:20:23.977Z,1537647623.977 [DataOverHttps](INFO): SBD MOMSN=8562671
2018-09-22T20:20:33.214Z,1537647633.214 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180922T190757/Express0031.lzma
2018-09-22T20:20:33.986Z,1537647633.986 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0031.lzma.bak
2018-09-22T20:20:33.986Z,1537647633.986 [DataOverHttps](INFO): SBD MOMSN=8562686
2018-09-22T20:20:34.505Z,1537647634.505 [sci2:NeedComms:D] Stopped
2018-09-22T20:20:34.506Z,1537647634.506 [sci2:NeedComms:E] Running Loop=1
2018-09-22T20:20:34.854Z,1537647634.854 [sci2:NeedComms:E](DEBUG): Initialize ReadDataComponent to sense time_fix
2018-09-22T20:20:38.092Z,1537647638.092 [NAL9602](INFO): Powering up
2018-09-22T20:20:49.039Z,1537647649.039 [NAL9602](INFO): NAL9602 initialized
2018-09-22T20:21:07.850Z,1537647667.850 [NAL9602](INFO): SBD MO Status=0, MOMSN=1141, MT Status=0, MTMSN=0
2018-09-22T20:21:07.850Z,1537647667.850 [NAL9602](INFO): No messages in MT queue
2018-09-22T20:23:12.423Z,1537647792.423 [NAL9602](INFO): GPS fix at 20180922T202301: (36.839590, -121.893276)
2018-09-22T20:23:12.484Z,1537647792.484 [sci2:NeedComms:E] Stopped
2018-09-22T20:23:12.485Z,1537647792.485 [sci2:NeedComms](INFO): Completed sci2:NeedComms
2018-09-22T20:23:12.486Z,1537647792.486 [sci2:NeedComms] Stopped
2018-09-22T20:23:12.486Z,1537647792.486 [sci2:NeedComms](DEBUG): Aggregate::uninitialize sci2:NeedComms
2018-09-22T20:23:12.486Z,1537647792.486 [sci2:NeedComms:B.GoToSurface] Stopped
2018-09-22T20:23:12.486Z,1537647792.486 [sci2:NeedComms:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-22T20:23:12.886Z,1537647792.886 [sci2:StartingMission](INFO): Completed sci2:StartingMission
2018-09-22T20:23:12.886Z,1537647792.886 [sci2:StartingMission] Stopped
2018-09-22T20:23:12.886Z,1537647792.886 [sci2:StartingMission](DEBUG): Aggregate::uninitialize sci2:StartingMission
2018-09-22T20:23:12.886Z,1537647792.886 [sci2:Lap] Running Loop=1
2018-09-22T20:23:12.886Z,1537647792.886 [sci2:Lap](DEBUG): Aggregate::initialize sci2:Lap
2018-09-22T20:23:12.886Z,1537647792.886 [sci2:Lap:Wpt1] Running Loop=1
2018-09-22T20:23:12.887Z,1537647792.887 [sci2:Lap:Wpt1](DEBUG): Aggregate::initialize sci2:Lap:Wpt1
2018-09-22T20:23:12.887Z,1537647792.887 [sci2:Lap:Wpt1:A.Waypoint] Running Loop=1
2018-09-22T20:23:12.887Z,1537647792.887 [sci2:Lap:Wpt1:A.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-22T20:23:44.274Z,1537647824.274 [Radio_Surface](INFO): Powering down
2018-09-22T20:23:45.189Z,1537647825.189 [NAL9602](INFO): Powering down
2018-09-22T20:25:05.984Z,1537647905.984 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T20:25:41.184Z,1537647941.184 [DataOverHttps](INFO): setting unavailable, lastComms_.elapsed()=180.375854
2018-09-22T20:26:17.605Z,1537647977.605 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-22T20:26:17.613Z,1537647977.613 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092213315129
2018-09-22T20:27:06.384Z,1537648026.384 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T20:28:06.402Z,1537648086.402 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T20:29:06.403Z,1537648146.403 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T20:30:06.803Z,1537648206.803 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T20:31:07.202Z,1537648267.202 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T20:32:07.203Z,1537648327.203 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T20:33:07.602Z,1537648387.602 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T20:33:36.450Z,1537648416.450 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for altitude
2018-09-22T20:33:36.450Z,1537648416.450 [RDI_Pathfinder](ERROR): Failed to parse:
:BD,        +0.00,        +0.D,0e8d,0ffe, 14.147, -0.125, 0.000
2018-09-22T20:34:07.600Z,1537648447.600 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T20:34:22.611Z,1537648462.611 [WetLabsSeaOWL_UV_A](DEBUG): Error parsing data: SEAOWLA2K-019	3864	466	4256	4256	24120	4120	3298	3298	78	330	330

2018-09-22T20:35:07.000Z,1537648508.000 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T20:36:08.400Z,1537648568.400 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T20:36:55.257Z,1537648615.257 [sci2:Lap:Wpt1:A.Waypoint](IMPORTANT): Reached Waypoint: 36.834203,-121.898004
2018-09-22T20:36:55.257Z,1537648615.257 [sci2:Lap:Wpt1:A.Waypoint] Stopped
2018-09-22T20:36:55.258Z,1537648615.258 [sci2:Lap:Wpt1:A.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-22T20:36:55.258Z,1537648615.258 [sci2:Lap:Wpt1](INFO): Completed sci2:Lap:Wpt1
2018-09-22T20:36:55.258Z,1537648615.258 [sci2:Lap:Wpt1] Stopped
2018-09-22T20:36:55.258Z,1537648615.258 [sci2:Lap:Wpt1](DEBUG): Aggregate::uninitialize sci2:Lap:Wpt1
2018-09-22T20:36:55.258Z,1537648615.258 [sci2:Lap:Wpt2] Running Loop=1
2018-09-22T20:36:55.259Z,1537648615.259 [sci2:Lap:Wpt2](DEBUG): Aggregate::initialize sci2:Lap:Wpt2
2018-09-22T20:36:55.259Z,1537648615.259 [sci2:Lap:Wpt2:A.Waypoint] Running Loop=1
2018-09-22T20:36:55.259Z,1537648615.259 [sci2:Lap:Wpt2:A.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-22T20:37:08.800Z,1537648628.800 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T20:37:58.465Z,1537648678.465 [sci2:Lap:Wpt2:A.Waypoint] Stopped
2018-09-22T20:37:58.465Z,1537648678.465 [sci2:Lap:Wpt2:A.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-22T20:37:58.465Z,1537648678.465 [sci2:Lap:Wpt2](INFO): Completed sci2:Lap:Wpt2
2018-09-22T20:37:58.465Z,1537648678.465 [sci2:Lap:Wpt2] Stopped
2018-09-22T20:37:58.466Z,1537648678.466 [sci2:Lap:Wpt2](DEBUG): Aggregate::uninitialize sci2:Lap:Wpt2
2018-09-22T20:37:58.466Z,1537648678.466 [sci2:Lap:Wpt3] Running Loop=1
2018-09-22T20:37:58.466Z,1537648678.466 [sci2:Lap:Wpt3](DEBUG): Aggregate::initialize sci2:Lap:Wpt3
2018-09-22T20:37:58.466Z,1537648678.466 [sci2:Lap:Wpt3:A.Waypoint] Running Loop=1
2018-09-22T20:37:58.466Z,1537648678.466 [sci2:Lap:Wpt3:A.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-22T20:37:58.861Z,1537648678.861 [sci2:Lap:Wpt3:A.Waypoint] Stopped
2018-09-22T20:37:58.861Z,1537648678.861 [sci2:Lap:Wpt3:A.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-22T20:37:58.861Z,1537648678.861 [sci2:Lap:Wpt3](INFO): Completed sci2:Lap:Wpt3
2018-09-22T20:37:58.862Z,1537648678.862 [sci2:Lap:Wpt3] Stopped
2018-09-22T20:37:58.862Z,1537648678.862 [sci2:Lap:Wpt3](DEBUG): Aggregate::uninitialize sci2:Lap:Wpt3
2018-09-22T20:37:58.862Z,1537648678.862 [sci2:Lap:Wpt4] Running Loop=1
2018-09-22T20:37:58.862Z,1537648678.862 [sci2:Lap:Wpt4](DEBUG): Aggregate::initialize sci2:Lap:Wpt4
2018-09-22T20:37:58.862Z,1537648678.862 [sci2:Lap:Wpt4:A.Waypoint] Running Loop=1
2018-09-22T20:37:58.862Z,1537648678.862 [sci2:Lap:Wpt4:A.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-22T20:37:59.254Z,1537648679.254 [sci2:Lap:Wpt4:A.Waypoint] Stopped
2018-09-22T20:37:59.254Z,1537648679.254 [sci2:Lap:Wpt4:A.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-22T20:37:59.254Z,1537648679.254 [sci2:Lap:Wpt4](INFO): Completed sci2:Lap:Wpt4
2018-09-22T20:37:59.254Z,1537648679.254 [sci2:Lap:Wpt4] Stopped
2018-09-22T20:37:59.254Z,1537648679.254 [sci2:Lap:Wpt4](DEBUG): Aggregate::uninitialize sci2:Lap:Wpt4
2018-09-22T20:37:59.254Z,1537648679.254 [sci2:Lap:Wpt5] Running Loop=1
2018-09-22T20:37:59.254Z,1537648679.254 [sci2:Lap:Wpt5](DEBUG): Aggregate::initialize sci2:Lap:Wpt5
2018-09-22T20:37:59.255Z,1537648679.255 [sci2:Lap:Wpt5:A.Waypoint] Running Loop=1
2018-09-22T20:37:59.255Z,1537648679.255 [sci2:Lap:Wpt5:A.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-22T20:37:59.678Z,1537648679.678 [sci2:Lap:Wpt5:A.Waypoint] Stopped
2018-09-22T20:37:59.678Z,1537648679.678 [sci2:Lap:Wpt5:A.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-22T20:37:59.678Z,1537648679.678 [sci2:Lap:Wpt5](INFO): Completed sci2:Lap:Wpt5
2018-09-22T20:37:59.678Z,1537648679.678 [sci2:Lap:Wpt5] Stopped
2018-09-22T20:37:59.678Z,1537648679.678 [sci2:Lap:Wpt5](DEBUG): Aggregate::uninitialize sci2:Lap:Wpt5
2018-09-22T20:37:59.678Z,1537648679.678 [sci2:Lap:Wpt6] Running Loop=1
2018-09-22T20:37:59.678Z,1537648679.678 [sci2:Lap:Wpt6](DEBUG): Aggregate::initialize sci2:Lap:Wpt6
2018-09-22T20:37:59.679Z,1537648679.679 [sci2:Lap:Wpt6:A.Waypoint] Running Loop=1
2018-09-22T20:37:59.679Z,1537648679.679 [sci2:Lap:Wpt6:A.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-22T20:38:00.063Z,1537648680.063 [sci2:Lap:Wpt6:A.Waypoint] Stopped
2018-09-22T20:38:00.063Z,1537648680.063 [sci2:Lap:Wpt6:A.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-22T20:38:00.063Z,1537648680.063 [sci2:Lap:Wpt6](INFO): Completed sci2:Lap:Wpt6
2018-09-22T20:38:00.063Z,1537648680.063 [sci2:Lap:Wpt6] Stopped
2018-09-22T20:38:00.064Z,1537648680.064 [sci2:Lap:Wpt6](DEBUG): Aggregate::uninitialize sci2:Lap:Wpt6
2018-09-22T20:38:00.064Z,1537648680.064 [sci2:Lap:Wpt7] Running Loop=1
2018-09-22T20:38:00.064Z,1537648680.064 [sci2:Lap:Wpt7](DEBUG): Aggregate::initialize sci2:Lap:Wpt7
2018-09-22T20:38:00.064Z,1537648680.064 [sci2:Lap:Wpt7:A.Waypoint] Running Loop=1
2018-09-22T20:38:00.064Z,1537648680.064 [sci2:Lap:Wpt7:A.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-22T20:38:00.476Z,1537648680.476 [sci2:Lap:Wpt7:A.Waypoint] Stopped
2018-09-22T20:38:00.477Z,1537648680.477 [sci2:Lap:Wpt7:A.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-22T20:38:00.481Z,1537648680.481 [sci2:Lap:Wpt7](INFO): Completed sci2:Lap:Wpt7
2018-09-22T20:38:00.481Z,1537648680.481 [sci2:Lap:Wpt7] Stopped
2018-09-22T20:38:00.481Z,1537648680.481 [sci2:Lap:Wpt7](DEBUG): Aggregate::uninitialize sci2:Lap:Wpt7
2018-09-22T20:38:00.481Z,1537648680.481 [sci2:Lap](INFO): Completed sci2:Lap
2018-09-22T20:38:00.481Z,1537648680.481 [sci2:Lap] Stopped
2018-09-22T20:38:00.482Z,1537648680.482 [sci2:Lap](DEBUG): Aggregate::uninitialize sci2:Lap
2018-09-22T20:38:00.492Z,1537648680.492 [sci2](INFO): Completed sci2
2018-09-22T20:38:00.492Z,1537648680.492 [MissionManager](INFO): sci2 is completed.
2018-09-22T20:38:00.492Z,1537648680.492 [MissionManager](INFO): Uninitializing Mission sci2
2018-09-22T20:38:00.492Z,1537648680.492 [sci2] Stopped
2018-09-22T20:38:00.492Z,1537648680.492 [sci2](DEBUG): Aggregate::uninitialize sci2
2018-09-22T20:38:00.492Z,1537648680.492 [sci2:Science] Stopped
2018-09-22T20:38:00.498Z,1537648680.498 [sci2:Science](DEBUG): Aggregate::uninitialize sci2:Science
2018-09-22T20:38:00.498Z,1537648680.498 [sci2:Science:G] Stopped
2018-09-22T20:38:00.498Z,1537648680.498 [sci2:Science:Read_Oil] Stopped
2018-09-22T20:38:00.498Z,1537648680.498 [sci2:Science:PeakDetectChl] Stopped
2018-09-22T20:38:00.498Z,1537648680.498 [sci2:Science:PeakDetectChl](DEBUG): Aggregate::uninitialize sci2:Science:PeakDetectChl
2018-09-22T20:38:00.498Z,1537648680.498 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2018-09-22T20:38:00.498Z,1537648680.498 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-22T20:38:00.498Z,1537648680.498 [sci2:StandardEnvelopes] Stopped
2018-09-22T20:38:00.498Z,1537648680.498 [sci2:StandardEnvelopes](DEBUG): Aggregate::uninitialize sci2:StandardEnvelopes
2018-09-22T20:38:00.499Z,1537648680.499 [sci2:StandardEnvelopes:A.AltitudeEnvelope] Stopped
2018-09-22T20:38:00.499Z,1537648680.499 [sci2:StandardEnvelopes:A.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-22T20:38:00.499Z,1537648680.499 [sci2:StandardEnvelopes:B.DepthEnvelope] Stopped
2018-09-22T20:38:00.499Z,1537648680.499 [sci2:StandardEnvelopes:B.DepthEnvelope](DEBUG): Uninitialize.
2018-09-22T20:38:00.499Z,1537648680.499 [sci2:StandardEnvelopes:C.OffshoreEnvelope] Stopped
2018-09-22T20:38:00.499Z,1537648680.499 [sci2:StandardEnvelopes:C.OffshoreEnvelope](DEBUG): Uninitialize OffshoreEnvelopeComponent.
2018-09-22T20:38:00.499Z,1537648680.499 [sci2:I.Pitch] Stopped
2018-09-22T20:38:00.499Z,1537648680.499 [sci2:J.Buoyancy] Stopped
2018-09-22T20:38:00.499Z,1537648680.499 [sci2:J.Buoyancy](DEBUG): Uninitialize Buoyancy Component.
2018-09-22T20:38:00.499Z,1537648680.499 [sci2:K.SetSpeed] Stopped
2018-09-22T20:38:00.499Z,1537648680.499 [sci2:K.SetSpeed](DEBUG): Uninitialize.
2018-09-22T20:38:00.499Z,1537648680.499 [sci2:L.DepthEnvelope] Stopped
2018-09-22T20:38:00.499Z,1537648680.499 [sci2:L.DepthEnvelope](DEBUG): Uninitialize.
2018-09-22T20:38:00.500Z,1537648680.500 [sci2:M.AltitudeEnvelope] Stopped
2018-09-22T20:38:00.500Z,1537648680.500 [sci2:M.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-22T20:38:00.500Z,1537648680.500 [sci2:N.YoYo] Stopped
2018-09-22T20:38:00.500Z,1537648680.500 [sci2:N.YoYo](DEBUG): Uninitialize YoYoComponent.
2018-09-22T20:38:00.859Z,1537648680.859 [MissionManager](IMPORTANT): Started mission Default
2018-09-22T20:38:00.859Z,1537648680.859 [Default] Running Loop=1
2018-09-22T20:38:00.859Z,1537648680.859 [Default](DEBUG): Aggregate::initialize Default
2018-09-22T20:38:00.859Z,1537648680.859 [Default:B.GoToSurface] Running Loop=1
2018-09-22T20:38:00.859Z,1537648680.859 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-22T20:38:00.860Z,1537648680.860 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-22T20:38:00.860Z,1537648680.860 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-22T20:38:00.860Z,1537648680.860 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-22T20:38:00.861Z,1537648680.861 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-22T20:38:00.861Z,1537648680.861 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-22T20:38:00.861Z,1537648680.861 [Default:A.Wait] Running Loop=1
2018-09-22T20:38:00.861Z,1537648680.861 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-22T20:38:00.997Z,1537648680.997 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-22T20:38:08.600Z,1537648688.600 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T20:38:13.870Z,1537648693.870 [Default:A.Wait](INFO): Done Waiting.
2018-09-22T20:38:13.870Z,1537648693.870 [Default:A.Wait] Stopped
2018-09-22T20:38:13.870Z,1537648693.870 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-22T20:38:14.209Z,1537648694.209 [BuoyancyServo](ERROR): getPosition uart error serial timeout
2018-09-22T20:38:14.209Z,1537648694.209 [BuoyancyServo](FAULT): Buoyancy getPosition uart error.serial timeout
2018-09-22T20:38:14.209Z,1537648694.209 [BuoyancyServo] Communications Fault, FailCount= 1
2018-09-22T20:38:14.209Z,1537648694.209 [BuoyancyServo](ERROR): Communications Fault
2018-09-22T20:38:14.286Z,1537648694.286 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-09-22T20:38:14.419Z,1537648694.419 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-22T20:38:14.420Z,1537648694.420 [BuoyancyServo](INFO): Powering down
2018-09-22T20:38:15.946Z,1537648695.946 [BuoyancyServo](FAULT): LCB fault:  Current Limiter Activated.
2018-09-22T20:38:15.946Z,1537648695.946 [BuoyancyServo] Hardware Fault, FailCount= 1
2018-09-22T20:38:15.946Z,1537648695.946 [BuoyancyServo](ERROR): Hardware Fault
2018-09-22T20:38:16.585Z,1537648696.585 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-22T20:38:16.585Z,1537648696.585 [BuoyancyServo] No Fault, FailCount= 1
2018-09-22T20:38:16.756Z,1537648696.756 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-22T20:38:16.874Z,1537648696.874 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-22T20:38:24.369Z,1537648704.369 [ElevatorOffsetCalculator](INFO): Removing expired estimator for commanded vars: speed 1.00 m/s, pitch 30.00 deg, mass-position -22.00 mm.
2018-09-22T20:38:24.398Z,1537648704.398 [Default:CheckIn] Running Loop=1
2018-09-22T20:38:24.398Z,1537648704.398 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-22T20:38:24.398Z,1537648704.398 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-22T20:38:24.442Z,1537648704.442 [Radio_Surface](INFO): Powering up
2018-09-22T20:38:25.110Z,1537648705.110 [NAL9602](INFO): Powering up
2018-09-22T20:38:36.326Z,1537648716.326 [NAL9602](INFO): NAL9602 initialized
2018-09-22T20:39:00.316Z,1537648740.316 [NAL9602](IMPORTANT): SBD MO Status=0, MOMSN=1142, MT Status=1, MTMSN=50
2018-09-22T20:39:00.316Z,1537648740.316 [NAL9602](INFO): Data available in MT queue
2018-09-22T20:39:00.801Z,1537648740.801 [NAL9602](INFO): Received command:stop
2018-09-22T20:39:00.854Z,1537648740.854 [CommandLine](IMPORTANT): got command stop
2018-09-22T20:39:00.854Z,1537648740.854 [CommandLine](IMPORTANT): Scheduling is paused
2018-09-22T20:39:00.854Z,1537648740.854 [Supervisor](INFO): Stop Mission called by CommandLine::commandStop
2018-09-22T20:39:09.106Z,1537648749.106 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T20:40:09.107Z,1537648809.107 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T20:40:37.522Z,1537648837.522 [NAL9602](INFO): GPS fix at 20180922T204026: (36.835021, -121.897780)
2018-09-22T20:40:37.594Z,1537648837.594 [UniversalFixResidualReporter](INFO): Fix residual: 4.9 %DT, over the last 861.6 m. Residual distance 42.6 m at bearing -168.5 degrees. Fix at (36.8350, -121.8978) with 647.2 m made good.
2018-09-22T20:40:37.595Z,1537648837.595 [Default:CheckIn:Read_GPS] Stopped
2018-09-22T20:40:37.595Z,1537648837.595 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-22T20:41:00.910Z,1537648860.910 [NAL9602](INFO): SBD MO Status=1, MOMSN=1143, MT Status=0, MTMSN=0
2018-09-22T20:41:00.957Z,1537648860.957 [NAL9602](INFO): Sent 74 bytes from file Logs/20180922T190757/Courier0033.lzma
2018-09-22T20:41:00.957Z,1537648860.957 [NAL9602](INFO): Packets left to send: 0
2018-09-22T20:41:00.959Z,1537648860.959 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Courier0033.lzma.parts/0000.sbd
2018-09-22T20:41:00.959Z,1537648860.959 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Courier0033.lzma
2018-09-22T20:41:09.444Z,1537648869.444 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T20:41:11.852Z,1537648871.852 [NAL9602](INFO): SBD MO Status=1, MOMSN=1144, MT Status=0, MTMSN=0
2018-09-22T20:41:11.909Z,1537648871.909 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0034.lzma
2018-09-22T20:41:11.909Z,1537648871.909 [NAL9602](INFO): Packets left to send: 2
2018-09-22T20:41:11.911Z,1537648871.911 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0034.lzma.parts/0002.sbd
2018-09-22T20:41:24.808Z,1537648884.808 [NAL9602](INFO): SBD MO Status=1, MOMSN=1145, MT Status=0, MTMSN=0
2018-09-22T20:41:24.857Z,1537648884.857 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0034.lzma
2018-09-22T20:41:24.857Z,1537648884.857 [NAL9602](INFO): Packets left to send: 1
2018-09-22T20:41:24.859Z,1537648884.859 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0034.lzma.parts/0001.sbd
2018-09-22T20:41:36.971Z,1537648896.971 [NAL9602](INFO): SBD MO Status=1, MOMSN=1146, MT Status=0, MTMSN=0
2018-09-22T20:41:37.021Z,1537648897.021 [NAL9602](INFO): Sent 326 bytes from file Logs/20180922T190757/Express0034.lzma
2018-09-22T20:41:37.021Z,1537648897.021 [NAL9602](INFO): Packets left to send: 0
2018-09-22T20:41:37.026Z,1537648897.026 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0034.lzma.parts/0000.sbd
2018-09-22T20:41:37.027Z,1537648897.027 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Express0034.lzma
2018-09-22T20:41:45.361Z,1537648905.361 [NAL9602](INFO): SBD MO Status=0, MOMSN=1147, MT Status=0, MTMSN=0
2018-09-22T20:41:52.623Z,1537648912.623 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-22T20:41:52.624Z,1537648912.624 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092213472429,35.S,-32768,-32768,-32768,V
2018-09-22T20:41:53.958Z,1537648913.958 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-32768,V
2018-09-22T20:42:01.140Z,1537648921.140 [NAL9602](INFO): SBD MO Status=1, MOMSN=1148, MT Status=0, MTMSN=0
2018-09-22T20:42:01.189Z,1537648921.189 [NAL9602](INFO): Sent 25 bytes from file Logs/20180922T190757/Courier0036.lzma
2018-09-22T20:42:01.190Z,1537648921.190 [NAL9602](INFO): Packets left to send: 0
2018-09-22T20:42:01.191Z,1537648921.191 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Courier0036.lzma.parts/0000.sbd
2018-09-22T20:42:01.192Z,1537648921.192 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Courier0036.lzma
2018-09-22T20:42:09.724Z,1537648929.724 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T20:42:12.928Z,1537648932.928 [NAL9602](INFO): SBD MO Status=1, MOMSN=1149, MT Status=0, MTMSN=0
2018-09-22T20:42:12.977Z,1537648932.977 [NAL9602](INFO): Sent 62 bytes from file Logs/20180922T190757/Express0037.lzma
2018-09-22T20:42:12.977Z,1537648932.977 [NAL9602](INFO): Packets left to send: 0
2018-09-22T20:42:12.979Z,1537648932.979 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0037.lzma.parts/0000.sbd
2018-09-22T20:42:12.979Z,1537648932.979 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Express0037.lzma
2018-09-22T20:42:23.336Z,1537648943.336 [NAL9602](INFO): SBD MO Status=0, MOMSN=1150, MT Status=0, MTMSN=0
2018-09-22T20:42:23.436Z,1537648943.436 [Default:CheckIn:Read_Iridium] Stopped
2018-09-22T20:42:23.437Z,1537648943.437 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-22T20:42:23.437Z,1537648943.437 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-22T20:42:44.235Z,1537648964.235 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.002704
2018-09-22T20:42:53.842Z,1537648973.842 [NAL9602](INFO): Powering down
2018-09-22T20:45:14.717Z,1537649114.717 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-22T20:45:14.717Z,1537649114.717 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-2768,-32768,V
2018-09-22T20:47:23.913Z,1537649243.913 [Default:CheckIn:C.Wait](INFO): Done Waiting.
2018-09-22T20:47:23.914Z,1537649243.914 [Default:CheckIn:C.Wait] Stopped
2018-09-22T20:47:23.914Z,1537649243.914 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-22T20:47:23.914Z,1537649243.914 [Default:CheckIn:D] Running Loop=1
2018-09-22T20:47:24.331Z,1537649244.331 [Default:CheckIn:D] Stopped
2018-09-22T20:47:24.331Z,1537649244.331 [Default:CheckIn:E] Running Loop=1
2018-09-22T20:47:24.716Z,1537649244.716 [Default:CheckIn:E](IMPORTANT): Default mission has been running for 9.391198 min 
2018-09-22T20:47:24.716Z,1537649244.716 [Default:CheckIn:E] Stopped
2018-09-22T20:47:24.716Z,1537649244.716 [Default:CheckIn](INFO): Completed Default:CheckIn
2018-09-22T20:47:24.716Z,1537649244.716 [Default:CheckIn] Stopped
2018-09-22T20:47:24.716Z,1537649244.716 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-22T20:47:24.717Z,1537649244.717 [Default:CheckIn](INFO): Running loop #2
2018-09-22T20:47:24.717Z,1537649244.717 [Default:CheckIn] Running Loop=2
2018-09-22T20:47:24.717Z,1537649244.717 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-22T20:47:24.717Z,1537649244.717 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-22T20:47:25.466Z,1537649245.466 [NAL9602](INFO): Powering up
2018-09-22T20:47:36.281Z,1537649256.281 [NAL9602](INFO): NAL9602 initialized
2018-09-22T20:47:55.282Z,1537649275.282 [NAL9602](INFO): SBD MO Status=0, MOMSN=1151, MT Status=0, MTMSN=0
2018-09-22T20:47:55.283Z,1537649275.283 [NAL9602](INFO): No messages in MT queue
2018-09-22T20:49:11.836Z,1537649351.836 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-22T20:49:11.836Z,1537649351.836 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092213544529,31,   0.0,1448.9,  0
2018-09-22T20:49:13.040Z,1537649353.040 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-22T20:49:13.041Z,1537649353.041 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,1809221354462-0.1,   0.0,1448.9,  0
2018-09-22T20:52:24.802Z,1537649544.802 [Default:CheckIn:Read_GPS](INFO): Timed out from 2018-09-22T20:47:24.7Z
2018-09-22T20:52:24.802Z,1537649544.802 [Default:CheckIn:Read_GPS] Stopped
2018-09-22T20:52:24.802Z,1537649544.802 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-22T20:52:29.292Z,1537649549.292 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180922T190757/Courier0039.lzma
2018-09-22T20:52:30.077Z,1537649550.077 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0039.lzma.bak
2018-09-22T20:52:30.077Z,1537649550.077 [DataOverHttps](INFO): SBD MOMSN=8562829
2018-09-22T20:52:39.269Z,1537649559.269 [DataOverHttps](INFO): Sending 118 bytes from file Logs/20180922T190757/Express0040.lzma
2018-09-22T20:52:40.429Z,1537649560.429 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0040.lzma.bak
2018-09-22T20:52:40.430Z,1537649560.430 [DataOverHttps](INFO): SBD MOMSN=8562831
2018-09-22T20:52:40.934Z,1537649560.934 [Default:CheckIn:Read_Iridium] Stopped
2018-09-22T20:52:40.934Z,1537649560.934 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-22T20:52:40.934Z,1537649560.934 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-22T20:52:59.358Z,1537649579.358 [NAL9602](INFO): Powering down
2018-09-22T20:57:41.305Z,1537649861.305 [Default:CheckIn:C.Wait](INFO): Done Waiting.
2018-09-22T20:57:41.306Z,1537649861.306 [Default:CheckIn:C.Wait] Stopped
2018-09-22T20:57:41.306Z,1537649861.306 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-22T20:57:41.306Z,1537649861.306 [Default:CheckIn:D] Running Loop=1
2018-09-22T20:57:41.726Z,1537649861.726 [Default:CheckIn:D] Stopped
2018-09-22T20:57:41.726Z,1537649861.726 [Default:CheckIn:E] Running Loop=1
2018-09-22T20:57:42.116Z,1537649862.116 [Default:CheckIn:E](IMPORTANT): Default mission has been running for 19.681112 min 
2018-09-22T20:57:42.116Z,1537649862.116 [Default:CheckIn:E] Stopped
2018-09-22T20:57:42.117Z,1537649862.117 [Default:CheckIn](INFO): Completed Default:CheckIn
2018-09-22T20:57:42.117Z,1537649862.117 [Default:CheckIn] Stopped
2018-09-22T20:57:42.117Z,1537649862.117 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-22T20:57:42.117Z,1537649862.117 [Default:CheckIn](INFO): Running loop #3
2018-09-22T20:57:42.117Z,1537649862.117 [Default:CheckIn] Running Loop=3
2018-09-22T20:57:42.117Z,1537649862.117 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-22T20:57:42.118Z,1537649862.118 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-22T20:57:45.488Z,1537649865.488 [NAL9602](INFO): Powering up
2018-09-22T20:57:56.658Z,1537649876.658 [NAL9602](INFO): NAL9602 initialized
2018-09-22T20:57:57.463Z,1537649877.463 [NAL9602](FAULT): GPS failed to acquire within timeout.
2018-09-22T20:57:57.463Z,1537649877.463 [NAL9602] Data Fault, FailCount= 1
2018-09-22T20:57:57.463Z,1537649877.463 [NAL9602](ERROR): Data Fault
2018-09-22T20:57:57.568Z,1537649877.568 [CBIT](ERROR): Data Fault in component: NAL9602
2018-09-22T20:57:57.858Z,1537649877.858 [NAL9602](INFO): Powering down
2018-09-22T20:57:58.720Z,1537649878.720 [CBIT](INFO): Clearing failed state for component NAL9602
2018-09-22T20:57:58.720Z,1537649878.720 [NAL9602] No Fault, FailCount= 1
2018-09-22T20:58:28.271Z,1537649908.271 [NAL9602](INFO): Powering up NAL9602
2018-09-22T20:58:39.066Z,1537649919.066 [NAL9602](INFO): NAL9602 initialized
2018-09-22T20:59:00.432Z,1537649940.432 [NAL9602](INFO): SBD MO Status=0, MOMSN=1152, MT Status=0, MTMSN=0
2018-09-22T20:59:00.432Z,1537649940.432 [NAL9602](INFO): No messages in MT queue
2018-09-22T21:02:42.287Z,1537650162.287 [Default:CheckIn:Read_GPS](INFO): Timed out from 2018-09-22T20:57:42.1Z
2018-09-22T21:02:42.287Z,1537650162.287 [Default:CheckIn:Read_GPS] Stopped
2018-09-22T21:02:42.288Z,1537650162.288 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-22T21:02:46.392Z,1537650166.392 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180922T190757/Courier0042.lzma
2018-09-22T21:02:47.161Z,1537650167.161 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0042.lzma.bak
2018-09-22T21:02:47.162Z,1537650167.162 [DataOverHttps](INFO): SBD MOMSN=8562867
2018-09-22T21:02:47.653Z,1537650167.653 [RDI_Pathfinder](ERROR): Failed to parse:

2018-09-22T21:02:57.459Z,1537650177.459 [DataOverHttps](INFO): Sending 162 bytes from file Logs/20180922T190757/Express0043.lzma
2018-09-22T21:02:58.265Z,1537650178.265 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0043.lzma.bak
2018-09-22T21:02:58.265Z,1537650178.265 [DataOverHttps](INFO): SBD MOMSN=8562869
2018-09-22T21:02:58.812Z,1537650178.812 [Default:CheckIn:Read_Iridium] Stopped
2018-09-22T21:02:58.812Z,1537650178.812 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-22T21:02:58.812Z,1537650178.812 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-22T21:03:12.758Z,1537650192.758 [NAL9602](INFO): Powering down
2018-09-22T21:04:04.094Z,1537650244.094 [DataOverHttps](IMPORTANT): SBD MTMSN=20180922T210353
2018-09-22T21:04:08.192Z,1537650248.192 [DataOverHttps](INFO): Received command:load Science/trackPatch.xml;set trackPatch.MissionTimeout 30 min;set trackPatch.YoYoMinDepth 2 m;set trackPatch.YoYoMaxDepth 20 m;set trackPatch.PeakChlShallowBnd 3 m;set trackPatch.PeakChlDeepBnd 15 m
2018-09-22T21:04:08.232Z,1537650248.232 [CommandLine](IMPORTANT): got command load ./Missions/Science/trackPatch.xml
2018-09-22T21:04:08.237Z,1537650248.237 [MissionManager](INFO): Loading Mission: ./Missions/Science/trackPatch.xml
2018-09-22T21:04:08.491Z,1537650248.491 [MissionManager](INFO): DefineArg trackPatch.MinAltitude = 5.000000 m
2018-09-22T21:04:08.494Z,1537650248.494 [MissionManager](INFO): DefineArg trackPatch.MaxDepth = 65.000000 m
2018-09-22T21:04:08.497Z,1537650248.497 [MissionManager](INFO): DefineArg trackPatch.MinWaterDepth = 10.000000 m
2018-09-22T21:04:08.500Z,1537650248.500 [MissionManager](INFO): DefineArg trackPatch.MinOffshore = 2000.000000 m
2018-09-22T21:04:08.503Z,1537650248.503 [MissionManager](INFO): DefineArg trackPatch.NeedCommsTime = 180.000000 min
2018-09-22T21:04:08.507Z,1537650248.507 [MissionManager](INFO): DefineArg trackPatch.MissionTimeout = 56.000000 h
2018-09-22T21:04:08.510Z,1537650248.510 [MissionManager](INFO): DefineArg trackPatch.MassDefault = 0.000000 cm
2018-09-22T21:04:08.514Z,1537650248.514 [MissionManager](INFO): DefineArg trackPatch.BuoyancyNeutral = 205.000004 cc
2018-09-22T21:04:08.533Z,1537650248.533 [MissionManager](INFO): DefineArg trackPatch.YoYoMinDepth = 3.000000 m
2018-09-22T21:04:08.536Z,1537650248.536 [MissionManager](INFO): DefineArg trackPatch.YoYoMaxDepth = 30.000000 m
2018-09-22T21:04:08.543Z,1537650248.543 [MissionManager](INFO): DefineArg trackPatch.YoYoUpPitch = 20.000000 arcdeg
2018-09-22T21:04:08.558Z,1537650248.558 [MissionManager](INFO): DefineArg trackPatch.YoYoDownPitch = -20.000000 arcdeg
2018-09-22T21:04:08.565Z,1537650248.565 [MissionManager](INFO): DefineArg trackPatch.Speed = 1.000000 m/s
2018-09-22T21:04:08.572Z,1537650248.572 [MissionManager](INFO): DefineArg trackPatch.WpMaxDistance = 1000.000000 m
2018-09-22T21:04:08.584Z,1537650248.584 [MissionManager](INFO): DefineArg trackPatch.WpTimeout = 8000.000000 s
2018-09-22T21:04:08.588Z,1537650248.588 [MissionManager](INFO): DefineArg trackPatch.WaterFrame = 1 bool
2018-09-22T21:04:08.599Z,1537650248.599 [MissionManager](INFO): DefineArg trackPatch.Repeat = 20.000000 count
2018-09-22T21:04:08.604Z,1537650248.604 [MissionManager](INFO): DefineArg trackPatch.Turn = 90.000000 arcdeg
2018-09-22T21:04:08.622Z,1537650248.622 [MissionManager](INFO): DefineArg trackPatch.Reverse = 180.000000 arcdeg
2018-09-22T21:04:08.630Z,1537650248.630 [MissionManager](INFO): DefineArg trackPatch.TwoPi = 360.000000 arcdeg
2018-09-22T21:04:08.637Z,1537650248.637 [MissionManager](INFO): DefineArg trackPatch.LowPassWindowLen = 20.000000 count
2018-09-22T21:04:08.640Z,1537650248.640 [MissionManager](INFO): DefineArg trackPatch.PeakChlShallowBnd = 10.000000 m
2018-09-22T21:04:08.651Z,1537650248.651 [MissionManager](INFO): DefineArg trackPatch.PeakChlDeepBnd = 20.000000 m
2018-09-22T21:04:08.663Z,1537650248.663 [MissionManager](INFO): DefineArg trackPatch.FilterWidth = 4.000000 count
2018-09-22T21:04:08.666Z,1537650248.666 [MissionManager](INFO): DefineArg trackPatch.BeginThreshold = nan ug/l
2018-09-22T21:04:08.678Z,1537650248.678 [MissionManager](INFO): DefineArg trackPatch.OffPeakFraction = 80.000000 %
2018-09-22T21:04:08.680Z,1537650248.680 [MissionManager](INFO): DefineArg trackPatch.PatchMode = 0 bool
2018-09-22T21:04:08.696Z,1537650248.696 [MissionManager](INFO): DefineArg trackPatch.WpBearing = -90.000000 arcdeg
2018-09-22T21:04:08.699Z,1537650248.699 [MissionManager](INFO): DefineOutput trackPatch.PatchDetectOn = 0 bool
2018-09-22T21:04:08.702Z,1537650248.702 [MissionManager](INFO): DefineOutput trackPatch.WpDone = 0 bool
2018-09-22T21:04:08.705Z,1537650248.705 [MissionManager](INFO): DefineOutput trackPatch.PatchChl = nan ug/l
2018-09-22T21:04:08.708Z,1537650248.708 [MissionManager](INFO): DefineOutput trackPatch.PatchChlDepth = nan m
2018-09-22T21:04:08.731Z,1537650248.731 [MissionManager](INFO): DefineOutput trackPatch.PatchChlLatitude = nan arcdeg
2018-09-22T21:04:08.734Z,1537650248.734 [MissionManager](INFO): DefineOutput trackPatch.PatchChlLongitude = nan arcdeg
2018-09-22T21:04:08.748Z,1537650248.748 [MissionManager](INFO): DefineOutput trackPatch.PatchChlDistance = 0.000000 m
2018-09-22T21:04:08.750Z,1537650248.750 [trackPatch:A.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-22T21:04:08.777Z,1537650248.777 [trackPatch:B.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-22T21:04:08.785Z,1537650248.785 [MissionManager](INFO): Inserting Stack: Missions/Insert/Surface.xml
2018-09-22T21:04:08.824Z,1537650248.824 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.SurfaceDepthRate = nan m/s
2018-09-22T21:04:08.844Z,1537650248.844 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.SurfacePitch = 20.000000 arcdeg
2018-09-22T21:04:08.847Z,1537650248.847 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.SurfaceSpeed = 1.000000 m/s
2018-09-22T21:04:08.850Z,1537650248.850 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.IridiumTimeout = 30.000000 min
2018-09-22T21:04:08.874Z,1537650248.874 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.UnpackSplitAtSurface = 0 bool
2018-09-22T21:04:08.875Z,1537650248.875 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-22T21:04:08.890Z,1537650248.890 [MissionManager](INFO): RedefineArg trackPatch:SurfaceCommsSplit.SurfacePitch = value:20.000000 arcdeg
2018-09-22T21:04:08.892Z,1537650248.892 [MissionManager](INFO): RedefineArg trackPatch:SurfaceCommsSplit.SurfaceSpeed = value:1.000000 m/s
2018-09-22T21:04:08.894Z,1537650248.894 [MissionManager](INFO): RedefineArg trackPatch:SurfaceCommsSplit.UnpackSplitAtSurface = value:1 bool
2018-09-22T21:04:08.896Z,1537650248.896 [MissionManager](INFO): Inserting Stack: Missions/Insert/Surface.xml
2018-09-22T21:04:08.940Z,1537650248.940 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.SurfaceDepthRate = nan m/s
2018-09-22T21:04:08.962Z,1537650248.962 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.SurfacePitch = 20.000000 arcdeg
2018-09-22T21:04:08.965Z,1537650248.965 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.SurfaceSpeed = 1.000000 m/s
2018-09-22T21:04:08.968Z,1537650248.968 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.IridiumTimeout = 30.000000 min
2018-09-22T21:04:08.992Z,1537650248.992 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.UnpackSplitAtSurface = 0 bool
2018-09-22T21:04:08.993Z,1537650248.993 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-22T21:04:09.023Z,1537650249.023 [MissionManager](INFO): RedefineArg trackPatch:SurfaceComms:SurfaceComms.SurfacePitch = value:20.000000 arcdeg
2018-09-22T21:04:09.046Z,1537650249.046 [MissionManager](INFO): RedefineArg trackPatch:SurfaceComms:SurfaceComms.SurfaceSpeed = value:1.000000 m/s
2018-09-22T21:04:09.053Z,1537650249.053 [trackPatch:F.OffshoreEnvelope](DEBUG): Construct OffshoreEnvelope.
2018-09-22T21:04:09.072Z,1537650249.072 [trackPatch:G.WaterDepthEnvelope](DEBUG): Construct WaterDepthEnvelope.
2018-09-22T21:04:09.078Z,1537650249.078 [trackPatch:H.Pitch](DEBUG): Construct.
2018-09-22T21:04:09.097Z,1537650249.097 [trackPatch:I.Buoyancy](DEBUG): Construct Buoyancy.
2018-09-22T21:04:09.099Z,1537650249.099 [MissionManager](INFO): Inserting Stack: Missions/Insert/Science.xml
2018-09-22T21:04:09.444Z,1537650249.444 [MissionManager](INFO): DefineArg trackPatch:Science.SampleISUS = 0 bool
2018-09-22T21:04:09.448Z,1537650249.448 [MissionManager](INFO): DefineArg trackPatch:Science.SampleISUSmaxPitch = 60.000000 arcdeg
2018-09-22T21:04:09.452Z,1537650249.452 [MissionManager](INFO): DefineArg trackPatch:Science.SampleISUSminPitch = -60.000000 arcdeg
2018-09-22T21:04:09.469Z,1537650249.469 [MissionManager](INFO): DefineArg trackPatch:Science.PeakDetectChlActive = 0 bool
2018-09-22T21:04:09.472Z,1537650249.472 [MissionManager](INFO): DefineArg trackPatch:Science.HighestChlPeakReportActive = 0 bool
2018-09-22T21:04:09.475Z,1537650249.475 [MissionManager](INFO): DefineArg trackPatch:Science.PatchTracking = 1 bool
2018-09-22T21:04:09.486Z,1537650249.486 [MissionManager](INFO): DefineArg trackPatch:Science.FilterWidthHorizontal = 3.000000 count
2018-09-22T21:04:09.494Z,1537650249.494 [MissionManager](INFO): DefineArg trackPatch:Science.NumProfilesSlidingwindow = 100.000000 count
2018-09-22T21:04:09.501Z,1537650249.501 [MissionManager](INFO): DefineArg trackPatch:Science.OffPeakFractionHorizontal = 80.000000 %
2018-09-22T21:04:09.504Z,1537650249.504 [MissionManager](INFO): DefineArg trackPatch:Science.PeakDetectNO3Active = 0 bool
2018-09-22T21:04:09.508Z,1537650249.508 [MissionManager](INFO): DefineArg trackPatch:Science.PeakDetectOilActive = 0 bool
2018-09-22T21:04:09.519Z,1537650249.519 [MissionManager](INFO): DefineArg trackPatch:Science.UpwardDerivativeOfTemperatureActive = 0 bool
2018-09-22T21:04:09.523Z,1537650249.523 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledAanderaaO2 = 0.000000 bool
2018-09-22T21:04:09.534Z,1537650249.534 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledNeilBrown = 0.000000 bool
2018-09-22T21:04:09.538Z,1537650249.538 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledSeabird = 0.000000 bool
2018-09-22T21:04:09.550Z,1537650249.550 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledTurbulence_NPS = 0.000000 bool
2018-09-22T21:04:09.558Z,1537650249.558 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledWetLabsBB2FL = 0.000000 bool
2018-09-22T21:04:09.565Z,1537650249.565 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledWetLabsSeaOWL_UV_A = 1.000000 bool
2018-09-22T21:04:09.573Z,1537650249.573 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledISUS = 0.000000 bool
2018-09-22T21:04:09.576Z,1537650249.576 [MissionManager](INFO): DefineArg trackPatch:Science.LowPassWindowLength = 20.000000 count
2018-09-22T21:04:09.583Z,1537650249.583 [MissionManager](INFO): DefineArg trackPatch:Science.PeakChlShallowBound = 10.000000 m
2018-09-22T21:04:09.588Z,1537650249.588 [MissionManager](INFO): DefineArg trackPatch:Science.PeakChlDeepBound = 20.000000 m
2018-09-22T21:04:09.607Z,1537650249.607 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChl = 0.000000 ug/l
2018-09-22T21:04:09.614Z,1537650249.614 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlDepth = 0.000000 m
2018-09-22T21:04:09.622Z,1537650249.622 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlTemperature = 0.000000 degC
2018-09-22T21:04:09.625Z,1537650249.625 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlLatitude = nan arcdeg
2018-09-22T21:04:09.628Z,1537650249.628 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlLongitude = nan arcdeg
2018-09-22T21:04:09.631Z,1537650249.631 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3 = 0.000000 umol/l
2018-09-22T21:04:09.650Z,1537650249.650 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3Depth = 0.000000 m
2018-09-22T21:04:09.653Z,1537650249.653 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3Latitude = nan arcdeg
2018-09-22T21:04:09.656Z,1537650249.656 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3Longitude = nan arcdeg
2018-09-22T21:04:09.681Z,1537650249.681 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChl = 0.000000 m
2018-09-22T21:04:09.684Z,1537650249.684 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlDepth = 0.000000 m
2018-09-22T21:04:09.687Z,1537650249.687 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlLatitude = nan arcdeg
2018-09-22T21:04:09.702Z,1537650249.702 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlLongitude = nan arcdeg
2018-09-22T21:04:09.705Z,1537650249.705 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlDistance = nan m
2018-09-22T21:04:09.708Z,1537650249.708 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOil = 0.000000 kg/m3
2018-09-22T21:04:09.711Z,1537650249.711 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOilDepth = 0.000000 m
2018-09-22T21:04:09.727Z,1537650249.727 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOilLatitude = nan arcdeg
2018-09-22T21:04:09.730Z,1537650249.730 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOilLongitude = nan arcdeg
2018-09-22T21:04:09.762Z,1537650249.762 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-22T21:04:09.791Z,1537650249.791 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-22T21:04:09.822Z,1537650249.822 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-22T21:04:09.843Z,1537650249.843 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-22T21:04:09.853Z,1537650249.853 [MissionManager](INFO): RedefineArg trackPatch:Science.PeakDetectChlActive = value:1 bool
2018-09-22T21:04:09.855Z,1537650249.855 [MissionManager](INFO): RedefineArg trackPatch:Science.PatchTracking = value:1 bool
2018-09-22T21:04:09.856Z,1537650249.856 [MissionManager](INFO): RedefineArg trackPatch:Science.LowPassWindowLength = reader:trackPatch.LowPassWindowLen
2018-09-22T21:04:09.871Z,1537650249.871 [MissionManager](INFO): RedefineArg trackPatch:Science.PeakChlShallowBound = reader:trackPatch.PeakChlShallowBnd
2018-09-22T21:04:09.872Z,1537650249.872 [MissionManager](INFO): RedefineArg trackPatch:Science.PeakChlDeepBound = reader:trackPatch.PeakChlDeepBnd
2018-09-22T21:04:09.874Z,1537650249.874 [MissionManager](INFO): RedefineArg trackPatch:Science.OffPeakFractionHorizontal = reader:trackPatch.OffPeakFraction
2018-09-22T21:04:09.875Z,1537650249.875 [trackPatch:K.SetSpeed](DEBUG): Construct.
2018-09-22T21:04:09.878Z,1537650249.878 [trackPatch:L.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-22T21:04:09.900Z,1537650249.900 [trackPatch:M.YoYo](DEBUG): Construct YoYo.
2018-09-22T21:04:09.926Z,1537650249.926 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-22T21:04:09.969Z,1537650249.969 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-22T21:04:09.000Z,1537650250.000 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-22T21:04:10.040Z,1537650250.040 [trackPatch:PatchDetectHorizontal:InLegWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-22T21:04:10.073Z,1537650250.073 [trackPatch:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-22T21:04:10.188Z,1537650250.188 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Trigger="Tethys/Trigger" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Trigger http://okeanids.mbari.org/tethys/Xml/Trigger.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="trackPatch">

    <Description>
        Vehicle runs yo-yos, with patch detect enabled for cholorphyll
        concentration.
    </Description>

<!-- Vehicle safety parameters -->

    <DefineArg Name="MinAltitude"><Description>
        Minimum altitude for the entire mission.
    </Description><Units:meter/><Value>5</Value></DefineArg>

    <DefineArg Name="MaxDepth"><Description>
        Maximum depth for the entire mission.
    </Description><Units:meter/><Value>65</Value></DefineArg>

    <DefineArg Name="MinWaterDepth"><Description>
        Minimum water depth for the entire mission.
    </Description><Units:meter/><Value>10</Value></DefineArg>

    <DefineArg Name="MinOffshore"><Description>
        Minimum offshore distance for the entire mission.
    </Description><Units:meter/><Value>2000</Value></DefineArg>

    <DefineArg Name="NeedCommsTime"><Description>
        Maximum time between surfacings for communications
    </Description><Units:minute/><Value>180</Value></DefineArg>

    <DefineArg Name="MissionTimeout"><Description>
        Timeout for the entire mission
    </Description><Units:hour/><Value>56</Value></DefineArg>

    <DefineArg Name="MassDefault"><Description>
        Static setting for mass during the mission. Defaults to massDefault
        setting in the Config/Control.cfg file.
    </Description><Control:VerticalControl.massDefault/></DefineArg>

    <DefineArg Name="BuoyancyNeutral"><Description>
        Buoyancy bladder position while performing the YoYo behavior. Defaults
        to buoyancyNeutral setting in the Config/Control.cfg file.
    </Description><Control:VerticalControl.buoyancyNeutral/></DefineArg>

<!-- Basic guidance settings -->

    <DefineArg Name="YoYoMinDepth"><Description>
        Minimum depth during yo-yo's.
    </Description><Units:meter/><Value>3.0</Value></DefineArg>

    <DefineArg Name="YoYoMaxDepth"><Description>
        Maximum depth during yo-yo's.
    </Description><Units:meter/><Value>30.0</Value></DefineArg>

    <DefineArg Name="YoYoUpPitch"><Description>
        Pitch when yo-yo's are ascending.
    </Description><Units:degree/><Value>20.0</Value></DefineArg>

    <DefineArg Name="YoYoDownPitch"><Description>
        Pitch when yo-yo's are descending.
    </Description><Units:degree/><Value>-20.0</Value></DefineArg>

    <DefineArg Name="Speed"><Description>
        Vehicle speed.
    </Description><Units:meter_per_second/><Value>1</Value></DefineArg>

    <DefineArg Name="WpMaxDistance"><Description>
        Maximum length of each tracking leg
<!--debug
    </Description><Units:meter/><Value>7500</Value></DefineArg>
-->
    </Description><Units:meter/><Value>1000</Value></DefineArg>

    <DefineArg Name="WpTimeout"><Description>
        Maximum duration of each tracking leg
    </Description><Units:second/><Value>8000</Value></DefineArg>

    <DefineArg Name="WaterFrame"><Description>
        Set WaterFrame true to drive towards waypoints in the water frame of
        reference
    </Description><True/></DefineArg>

    <DefineArg Name="Repeat"><Description>
        Maximum number of tracking legs
    </Description><Units:count/><Value>20</Value></DefineArg>

<!-- Constant settings for each tracking leg -->

    <DefineArg Name="Turn"><Description>
        Amount to turn at each leg
    </Description><Units:degree/><Value>90</Value></DefineArg>

    <DefineArg Name="Reverse"><Description>
        Change in bearing which reverses vehicle direction
    </Description><Units:degree/><Value>180</Value></DefineArg>

    <DefineArg Name="TwoPi"><Description>
        Applied to stop run-up of angles
    </Description><Units:degree/><Value>360</Value></DefineArg>

    <DefineArg Name="LowPassWindowLen"><Description>
        Low-pass window length (based on depth sensor sampling interval 0.4
        second) for low-pass filtering.
    </Description><Units:count/><Value>20</Value></DefineArg>

    <DefineArg Name="PeakChlShallowBnd"><Description>
        Shallow depth bound for detecting chl peak on each descent or ascent
        profile.
<!--debug
    </Description><Units:meter/><Value>NaN</Value></DefineArg>
-->
    </Description><Units:meter/><Value>10</Value></DefineArg>

    <DefineArg Name="PeakChlDeepBnd"><Description>
        Deep depth bound for detecting chl peak on each descent or ascent
        profile.
<!--debug
    </Description><Units:meter/><Value>NaN</Value></DefineArg>
-->
    </Description><Units:meter/><Value>20</Value></DefineArg>

    <DefineArg Name="FilterWidth"><Description>
        Width of boxcar filter used in horizontal patch detection
    </Description><Units:count/><Value>4</Value></DefineArg>

    <DefineArg Name="BeginThreshold"><Description>
        If non-NaN, sets threshold for starting horizontal patch detection
    </Description><Units:microgram_per_liter/><Value>NaN</Value></DefineArg>

    <DefineArg Name="OffPeakFraction"><Description>
        When filtered horizontal value is this fraction of the peak, consider it
        outside the patch.
    </Description><Units:percent/><Value>80</Value></DefineArg>

    <DefineArg Name="PatchMode"><Description>
        If true, use center of "in peak" range as the turn-around point. If
        false use maximum horizontal peak location as the turn-around point.
    </Description><False/></DefineArg>

<!-- Variable Settings for each tracking leg -->

    <DefineArg Name="WpBearing"><Description>
        Bearing being followed in the current leg. Set this to initialize start
        direction of patch tracking.
    </Description><Units:degree/><Value>-90</Value></DefineArg>

    <DefineOutput Name="PatchDetectOn"><Description>
        Mission sets this to true when the patch has been crossed.
    </Description><False/></DefineOutput>

    <DefineOutput Name="WpDone"><Description>
        Mission sets this to true when the cross-patch waypoint has been
        reached.
    </Description><False/></DefineOutput>

    <DefineOutput Name="PatchChl"><Units:microgram_per_liter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlDepth"><Units:meter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlDistance"><Units:meter/><Value>0</Value></DefineOutput>

<!-- The timeout -->

    <Timeout Duration="MissionTimeout"/>

<!-- And now the mission -->

    <Guidance:AltitudeEnvelope>
        <Parallel/>
        <Setting><Guidance:AltitudeEnvelope.minAltitude/><Arg Name="MinAltitude"/></Setting>
    </Guidance:AltitudeEnvelope>

    <Guidance:DepthEnvelope>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="MaxDepth"/></Setting>
    </Guidance:DepthEnvelope>

    <Insert Filename="Insert/Surface.xml" Id="SurfaceCommsSplit">
        <RedefineArg Name="SurfacePitch"><Units:degree/><Value>20</Value></RedefineArg>
        <RedefineArg Name="SurfaceSpeed"><Units:meter_per_second/><Value>1</Value></RedefineArg>
        <RedefineArg Name="UnpackSplitAtSurface"><True/></RedefineArg>
    </Insert>

    <Aggregate Id="SurfaceComms">

        <When>
            <Called/>
        </When>

        <Insert Filename="Insert/Surface.xml">
            <RedefineArg Name="SurfacePitch"><Units:degree/><Value>20</Value></RedefineArg>
            <RedefineArg Name="SurfaceSpeed"><Units:meter_per_second/><Value>1</Value></RedefineArg>
        </Insert>

    </Aggregate>

<!-- GPS Update.  Don't go too long w/o a GPS fix. -->

    <Aggregate Id="NeedComms">

        <When>
            <Universal:platform_pitch_angle/>
            <Gt><Units:degree/><Value>0</Value></Gt>
            <And><Elapsed><Universal:time_fix/></Elapsed><Gt><Arg Name="NeedCommsTime"/></Gt></And>
            <Or><Elapsed><Universal:time_fix/></Elapsed><Gt><Arg Name="NeedCommsTime"/><Add><Units:minute/><Value>10</Value></Add></Gt></Or>
        </When>

        <Syslog Severity="Important">NeedComms Timeout Surfacing</Syslog>

        <Call RefId="SurfaceComms"/>

    </Aggregate>

    <Guidance:OffshoreEnvelope>
        <Parallel/>
        <Setting><Guidance:OffshoreEnvelope.minOffshore/><Arg Name="MinOffshore"/></Setting>
    </Guidance:OffshoreEnvelope>

    <Guidance:WaterDepthEnvelope>
        <Parallel/>
        <Setting><Guidance:WaterDepthEnvelope.minWaterDepth/><Arg Name="MinWaterDepth"/></Setting>
    </Guidance:WaterDepthEnvelope>

    <Guidance:Pitch>
        <Parallel/>
        <Setting><Guidance:Pitch.massPosition/><Arg Name="MassDefault"/></Setting>
    </Guidance:Pitch>

    <Guidance:Buoyancy>
        <Parallel/>
        <Setting><Guidance:Buoyancy.position /><Arg Name="BuoyancyNeutral"/></Setting>
    </Guidance:Buoyancy>

<!-- If we're executing here or below, lets' get science data! -->

    <Insert Filename="Insert/Science.xml">
        <RedefineArg Name="PeakDetectChlActive"><True/></RedefineArg>
        <RedefineArg Name="PatchTracking"><True/></RedefineArg>
        <RedefineArg Name="LowPassWindowLength"><Arg Name="LowPassWindowLen"/></RedefineArg>
        <RedefineArg Name="PeakChlShallowBound"><Arg Name="PeakChlShallowBnd"/></RedefineArg>
        <RedefineArg Name="PeakChlDeepBound"><Arg Name="PeakChlDeepBnd"/></RedefineArg>
        <RedefineArg Name="OffPeakFractionHorizontal"><Arg Name="OffPeakFraction"/></RedefineArg>
    </Insert>

    <Guidance:SetSpeed>
        <Parallel/>
        <Setting><Guidance:SetSpeed.speed/><Arg Name="Speed"/></Setting>
    </Guidance:SetSpeed>

    <Guidance:DepthEnvelope>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.minDepth/><Arg Name="YoYoMinDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="YoYoMaxDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:DepthEnvelope.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:DepthEnvelope>

    <Guidance:YoYo>
        <Parallel/>
        <Setting><Guidance:YoYo.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:YoYo.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:YoYo>

    <Aggregate Id="PatchDetectHorizontal">

        <Sequence Repeat="Repeat"/>

        <Aggregate Id="PatchDetection">

            <When>
                <Arg Name="PatchDetectOn"/>
            </When>

            <Trigger:PeakDetectHorizontal Id="PeakDetectHorizontalTrigger">
                <Sequence/>
                <Break><Arg Name="WpDone"/>
                </Break>
                <Setting><Trigger:PeakDetectHorizontal.patchTracking/><Units:bool/><Value>1</Value></Setting>
                <Setting><Trigger:PeakDetectHorizontal.detectFrom/><Arg Name="Science:PeakChl"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.depthFrom/><Arg Name="Science:PeakChlDepth"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.latitudeFrom/><Arg Name="Science:PeakChlLatitude"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.longitudeFrom/><Arg Name="Science:PeakChlLongitude"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.beginThreshold/><Arg Name="BeginThreshold"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.offPeakFraction/><Arg Name="OffPeakFraction"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.filterWidth/><Arg Name="FilterWidth"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.centerPeak/><Arg Name="PatchMode"/></Setting>
                <OutputArg Name="PatchChl"><Trigger:PeakDetectHorizontal.peakDetect/></OutputArg>
                <OutputArg Name="PatchChlDepth"><Trigger:PeakDetectHorizontal.peakDepth/></OutputArg>
                <OutputArg Name="PatchChlLatitude"><Trigger:PeakDetectHorizontal.peakLatitude/></OutputArg>
                <OutputArg Name="PatchChlLongitude"><Trigger:PeakDetectHorizontal.peakLongitude/></OutputArg>
                <OutputArg Name="PatchChlDistance"><Trigger:PeakDetectHorizontal.peakDistance/></OutputArg>
            </Trigger:PeakDetectHorizontal>

            <Syslog Severity="Important">Fell below OffPeakFraction. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at <Arg Name="PatchChlLatitude"/><Units:degree/>, <Arg Name="PatchChlLongitude"/><Units:degree/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog>

            <SendData Service="Express"><Arg Name="PatchChl"/><Arg Name="PatchChlDepth"/><Arg Name="PatchChlLatitude"/><Arg Name="PatchChlLongitude"/>
            </SendData>

            <Assign Id="AssignPatchDetectOff"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

        </Aggregate>

        <Assign Id="AssignPatchDetectOn"><Sequence/><Arg Name="PatchDetectOn"/><True/></Assign>

        <Syslog Severity="Important">Next: bearing for CrossLeg: <Arg Name="WpBearing"/><Units:degree/>. WpMaxDistance = <Arg Name="WpMaxDistance"/><Units:meter/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>.</Syslog>

        <Aggregate Id="CrossLeg">

            <Description>
                This is a long leg across the width of the patch. Also the first
                leg in a mission run. Two waypoints run in parallel: a short run
                to the surfacing point, and a longer run to the edge of the
                patch.
            </Description>

            <Sequence/>

            <Break><Arg Name="WpDone"/>
                <Or><Arg Name="PatchDetectOn"/><Eq><False/></Eq></Or>
            </Break>

            <Guidance:Waypoint Id="CrossSurfaceWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="PatchChlDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Call RefId="SurfaceComms"/>

            <Guidance:Waypoint Id="CrossPeakWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="WpMaxDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

<!--debug-->
            <Syslog Severity="Important">CrossPeakWp done. Lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/>at <Arg Name="PatchChlLatitude"/><Units:degree/>,<Arg Name="PatchChlLongitude"/><Units:degree/>distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog>

            <Assign Id="AssignPatchDetectOffInCrossLeg"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

            <Assign Id="AssignWpDoneInCrossLeg"><Sequence/><Arg Name="WpDone"/><True/></Assign>

        </Aggregate>

        <Assign Id="AssignWpBearingForInLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Add><Arg Name="Reverse"/></Add><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

        <Syslog Severity="Important">Next: bearing for InLeg: <Arg Name="WpBearing"/><Units:degree/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/>at <Arg Name="PatchChlLatitude"/><Units:degree/>,<Arg Name="PatchChlLongitude"/><Units:degree/>distance = <Arg Name="PatchChlDistance"/><Units:meter/>.</Syslog>

        <Guidance:Waypoint Id="InLegWp">
            <Description>
                Simply drive back towards the patch center
            </Description>
            <Sequence/>
            <Timeout Duration="WpTimeout"/>
            <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="PatchChlDistance"/></Setting>
            <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
            <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
        </Guidance:Waypoint>

        <Assign Id="AssignWpBearingForOutLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Sub><Arg Name="Turn"/></Sub><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

        <Syslog Severity="Important">Next: bearing for OutLeg: <Arg Name="WpBearing"/><Units:degree/>. WpMaxDistance = <Arg Name="WpMaxDistance"/><Units:meter/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/>at <Arg Name="PatchChlLatitude"/><Units:degree/>,<Arg Name="PatchChlLongitude"/><Units:degree/>distance = <Arg Name="PatchChlDistance"/><Units:meter/>.</Syslog>

        <Call RefId="SurfaceCommsSplit"/>

        <Assign Id="AssignPatchDetectOnForOutLeg"><Sequence/><Arg Name="PatchDetectOn"/><True/></Assign>

        <Aggregate Id="OutLeg">

            <Description>
                Drive outward until edge of patch is detected.
            </Description>

            <Sequence/>

            <Break><Arg Name="WpDone"/>
                <Or><Arg Name="PatchDetectOn"/><Eq><False/></Eq></Or>
            </Break>

            <Guidance:Waypoint Id="OutLegWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="WpMaxDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Assign Id="AssignPatchDetectOffInOutLeg"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

            <Assign Id="AssignWpDoneInOutLeg"><Sequence/><Arg Name="WpDone"/><True/></Assign>

        </Aggregate>

        <Assign Id="AssignWpBearingForCrossLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Add><Arg Name="Reverse"/></Add><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

    </Aggregate>

</Mission>


2018-09-22T21:04:10.188Z,1537650250.188 [CommandLine](IMPORTANT): Loaded ./Missions/Science/trackPatch.xml
2018-09-22T21:04:22.170Z,1537650262.170 [CommandLine](IMPORTANT): got command set trackPatch.MissionTimeout 30.000000 minute
2018-09-22T21:04:22.171Z,1537650262.171 [CommandLine](IMPORTANT): got command set trackPatch.YoYoMinDepth 2.000000 meter
2018-09-22T21:04:22.172Z,1537650262.172 [CommandLine](IMPORTANT): got command set trackPatch.YoYoMaxDepth 20.000000 meter
2018-09-22T21:04:22.172Z,1537650262.172 [CommandLine](IMPORTANT): got command set trackPatch.PeakChlShallowBnd 3.000000 meter
2018-09-22T21:04:22.173Z,1537650262.173 [CommandLine](IMPORTANT): got command set trackPatch.PeakChlDeepBnd 15.000000 meter
2018-09-22T21:04:22.229Z,1537650262.229 [RDI_Pathfinder](ERROR): No DVL communication! Re-initializing
2018-09-22T21:04:22.234Z,1537650262.234 [RDI_Pathfinder] Communications Fault, FailCount= 1
2018-09-22T21:04:22.234Z,1537650262.234 [RDI_Pathfinder](ERROR): Communications Fault
2018-09-22T21:04:22.258Z,1537650262.258 [CBIT](ERROR): Communications Fault in component: RDI_Pathfinder
2018-09-22T21:04:22.413Z,1537650262.413 [RDI_Pathfinder](INFO): Powering down
2018-09-22T21:04:23.140Z,1537650263.140 [CBIT](INFO): Clearing failed state for component RDI_Pathfinder
2018-09-22T21:04:23.140Z,1537650263.140 [RDI_Pathfinder] No Fault, FailCount= 1
2018-09-22T21:04:36.695Z,1537650276.695 [RDI_Pathfinder](ERROR): Failed to parse:Pathfinder
2018-09-22T21:05:09.181Z,1537650309.181 [DataOverHttps](IMPORTANT): SBD MTMSN=20180922T210458
2018-09-22T21:05:13.354Z,1537650313.354 [DataOverHttps](INFO): Received command:run
2018-09-22T21:05:13.389Z,1537650313.389 [CommandLine](IMPORTANT): got command run
2018-09-22T21:05:13.392Z,1537650313.392 [CommandLine](IMPORTANT): Running 
2018-09-22T21:05:13.404Z,1537650313.404 [Default] Stopped
2018-09-22T21:05:13.405Z,1537650313.405 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-22T21:05:13.405Z,1537650313.405 [Default:B.GoToSurface] Stopped
2018-09-22T21:05:13.405Z,1537650313.405 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-22T21:05:13.405Z,1537650313.405 [Default:CheckIn] Stopped
2018-09-22T21:05:13.405Z,1537650313.405 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-22T21:05:13.405Z,1537650313.405 [Default:CheckIn:C.Wait] Stopped
2018-09-22T21:05:13.405Z,1537650313.405 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-22T21:05:13.406Z,1537650313.406 [MissionManager](IMPORTANT): Started mission trackPatch
2018-09-22T21:05:13.406Z,1537650313.406 [trackPatch] Running Loop=1
2018-09-22T21:05:13.406Z,1537650313.406 [trackPatch](DEBUG): Aggregate::initialize trackPatch
2018-09-22T21:05:13.406Z,1537650313.406 [trackPatch:A.AltitudeEnvelope] Running Loop=1
2018-09-22T21:05:13.406Z,1537650313.406 [trackPatch:A.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-22T21:05:13.406Z,1537650313.406 [trackPatch:B.DepthEnvelope] Running Loop=1
2018-09-22T21:05:13.406Z,1537650313.406 [trackPatch:B.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-22T21:05:13.407Z,1537650313.407 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-22T21:05:13.407Z,1537650313.407 [trackPatch:F.OffshoreEnvelope](DEBUG): Initialize OffshoreEnvelopeComponent.
2018-09-22T21:05:13.407Z,1537650313.407 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-22T21:05:13.407Z,1537650313.407 [trackPatch:G.WaterDepthEnvelope](DEBUG): Initialize WaterDepthEnvelopeComponent.
2018-09-22T21:05:13.407Z,1537650313.407 [trackPatch:H.Pitch] Running Loop=1
2018-09-22T21:05:13.407Z,1537650313.407 [trackPatch:H.Pitch](DEBUG): Initialize.
2018-09-22T21:05:13.407Z,1537650313.407 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-22T21:05:13.407Z,1537650313.407 [trackPatch:I.Buoyancy](DEBUG): Initialize Buoyancy Component.
2018-09-22T21:05:13.407Z,1537650313.407 [trackPatch:Science] Running Loop=1
2018-09-22T21:05:13.408Z,1537650313.408 [trackPatch:Science](DEBUG): Aggregate::initialize trackPatch:Science
2018-09-22T21:05:13.408Z,1537650313.408 [trackPatch:Science:A] Running Loop=1
2018-09-22T21:05:13.408Z,1537650313.408 [trackPatch:Science:B] Running Loop=1
2018-09-22T21:05:13.408Z,1537650313.408 [trackPatch:Science:C] Running Loop=1
2018-09-22T21:05:13.408Z,1537650313.408 [trackPatch:Science:D] Running Loop=1
2018-09-22T21:05:13.408Z,1537650313.408 [trackPatch:Science:E] Running Loop=1
2018-09-22T21:05:13.408Z,1537650313.408 [trackPatch:Science:F] Running Loop=1
2018-09-22T21:05:13.408Z,1537650313.408 [trackPatch:Science:G] Running Loop=1
2018-09-22T21:05:13.408Z,1537650313.408 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-22T21:05:13.408Z,1537650313.408 [trackPatch:Science:PeakDetectChl] Running Loop=1
2018-09-22T21:05:13.408Z,1537650313.408 [trackPatch:Science:PeakDetectChl](DEBUG): Aggregate::initialize trackPatch:Science:PeakDetectChl
2018-09-22T21:05:13.433Z,1537650313.433 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2018-09-22T21:05:13.433Z,1537650313.433 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-22T21:05:13.435Z,1537650313.435 [trackPatch:Science:HighestChlPeakReport] Running Loop=1
2018-09-22T21:05:13.435Z,1537650313.435 [trackPatch:Science:HighestChlPeakReport](DEBUG): Aggregate::initialize trackPatch:Science:HighestChlPeakReport
2018-09-22T21:05:13.435Z,1537650313.435 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2018-09-22T21:05:13.435Z,1537650313.435 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2018-09-22T21:05:13.435Z,1537650313.435 [trackPatch:Science:PeakDetectNO3] Running Loop=1
2018-09-22T21:05:13.436Z,1537650313.436 [trackPatch:Science:PeakDetectNO3](DEBUG): Aggregate::initialize trackPatch:Science:PeakDetectNO3
2018-09-22T21:05:13.436Z,1537650313.436 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2018-09-22T21:05:13.436Z,1537650313.436 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-22T21:05:13.437Z,1537650313.437 [trackPatch:Science:PeakDetectOil] Running Loop=1
2018-09-22T21:05:13.438Z,1537650313.438 [trackPatch:Science:PeakDetectOil](DEBUG): Aggregate::initialize trackPatch:Science:PeakDetectOil
2018-09-22T21:05:13.438Z,1537650313.438 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2018-09-22T21:05:13.438Z,1537650313.438 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-22T21:05:13.439Z,1537650313.439 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-22T21:05:13.439Z,1537650313.439 [trackPatch:K.SetSpeed](DEBUG): Initialize.
2018-09-22T21:05:13.439Z,1537650313.439 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-22T21:05:13.440Z,1537650313.440 [trackPatch:L.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-22T21:05:13.440Z,1537650313.440 [trackPatch:M.YoYo] Running Loop=1
2018-09-22T21:05:13.440Z,1537650313.440 [trackPatch:M.YoYo](DEBUG): Initialize YoYoComponent.
2018-09-22T21:05:13.440Z,1537650313.440 [trackPatch:SurfaceCommsSplit] Running Loop=1
2018-09-22T21:05:13.440Z,1537650313.440 [trackPatch:SurfaceCommsSplit](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit
2018-09-22T21:05:13.440Z,1537650313.440 [trackPatch:SurfaceCommsSplit:A.GoToSurface] Running Loop=1
2018-09-22T21:05:13.445Z,1537650313.445 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-22T21:05:13.445Z,1537650313.445 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-22T21:05:13.446Z,1537650313.446 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-22T21:05:13.446Z,1537650313.446 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-22T21:05:13.447Z,1537650313.447 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-22T21:05:13.447Z,1537650313.447 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-22T21:05:13.448Z,1537650313.448 [trackPatch:M.YoYo] Running Loop=1
2018-09-22T21:05:13.462Z,1537650313.462 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-22T21:05:13.471Z,1537650313.471 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-22T21:05:13.480Z,1537650313.480 [trackPatch:Science] Running Loop=1
2018-09-22T21:05:13.509Z,1537650313.509 [trackPatch:Science:PeakDetectOil] Stopped
2018-09-22T21:05:13.509Z,1537650313.509 [trackPatch:Science:PeakDetectOil](DEBUG): Aggregate::uninitialize trackPatch:Science:PeakDetectOil
2018-09-22T21:05:13.509Z,1537650313.509 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2018-09-22T21:05:13.509Z,1537650313.509 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-22T21:05:13.509Z,1537650313.509 [trackPatch:Science:PeakDetectNO3] Stopped
2018-09-22T21:05:13.510Z,1537650313.510 [trackPatch:Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize trackPatch:Science:PeakDetectNO3
2018-09-22T21:05:13.510Z,1537650313.510 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2018-09-22T21:05:13.510Z,1537650313.510 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-22T21:05:13.510Z,1537650313.510 [trackPatch:Science:HighestChlPeakReport] Stopped
2018-09-22T21:05:13.510Z,1537650313.510 [trackPatch:Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize trackPatch:Science:HighestChlPeakReport
2018-09-22T21:05:13.510Z,1537650313.510 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2018-09-22T21:05:13.510Z,1537650313.510 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-22T21:05:13.510Z,1537650313.510 [trackPatch:Science:PeakDetectChl] Running Loop=1
2018-09-22T21:05:13.529Z,1537650313.529 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-22T21:05:13.530Z,1537650313.530 [trackPatch:Science:Read_Oil](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-22T21:05:13.531Z,1537650313.531 [trackPatch:Science:G] Running Loop=1
2018-09-22T21:05:13.532Z,1537650313.532 [trackPatch:Science:G](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-22T21:05:13.534Z,1537650313.534 [trackPatch:Science:F] Stopped
2018-09-22T21:05:13.535Z,1537650313.535 [trackPatch:Science:E] Stopped
2018-09-22T21:05:13.535Z,1537650313.535 [trackPatch:Science:D] Stopped
2018-09-22T21:05:13.535Z,1537650313.535 [trackPatch:Science:C] Stopped
2018-09-22T21:05:13.535Z,1537650313.535 [trackPatch:Science:B] Stopped
2018-09-22T21:05:13.535Z,1537650313.535 [trackPatch:Science:A] Stopped
2018-09-22T21:05:13.535Z,1537650313.535 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-22T21:05:13.548Z,1537650313.548 [trackPatch:H.Pitch] Running Loop=1
2018-09-22T21:05:13.564Z,1537650313.564 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-22T21:05:13.587Z,1537650313.587 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-22T21:05:13.634Z,1537650313.634 [trackPatch:SurfaceCommsSplit:B] Running Loop=1
2018-09-22T21:05:13.634Z,1537650313.634 [trackPatch:SurfaceCommsSplit:B](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit:B
2018-09-22T21:05:13.634Z,1537650313.634 [trackPatch:SurfaceCommsSplit:B:A] Running Loop=1
2018-09-22T21:05:13.634Z,1537650313.634 [trackPatch:B.DepthEnvelope] Running Loop=1
2018-09-22T21:05:13.644Z,1537650313.644 [trackPatch:A.AltitudeEnvelope] Running Loop=1
2018-09-22T21:05:13.835Z,1537650313.835 [trackPatch:SurfaceCommsSplit:B:A](INFO): ##UnpackSplit##
2018-09-22T21:05:13.838Z,1537650313.838 [trackPatch:SurfaceCommsSplit:B:A] Stopped
2018-09-22T21:05:13.838Z,1537650313.838 [trackPatch:SurfaceCommsSplit:B](INFO): Completed trackPatch:SurfaceCommsSplit:B
2018-09-22T21:05:13.839Z,1537650313.839 [trackPatch:SurfaceCommsSplit:B] Stopped
2018-09-22T21:05:13.839Z,1537650313.839 [trackPatch:SurfaceCommsSplit:B](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit:B
2018-09-22T21:05:13.839Z,1537650313.839 [trackPatch:SurfaceCommsSplit:C] Running Loop=1
2018-09-22T21:05:13.839Z,1537650313.839 [trackPatch:SurfaceCommsSplit:C](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit:C
2018-09-22T21:05:13.839Z,1537650313.839 [trackPatch:SurfaceCommsSplit:C:A] Running Loop=1
2018-09-22T21:05:13.901Z,1537650313.901 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-22T21:05:13.901Z,1537650313.901 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-22T21:05:14.208Z,1537650314.208 [trackPatch:M.YoYo] Preempted
2018-09-22T21:05:14.208Z,1537650314.208 [trackPatch:L.DepthEnvelope] Preempted
2018-09-22T21:05:14.208Z,1537650314.208 [trackPatch:K.SetSpeed] Preempted
2018-09-22T21:05:14.208Z,1537650314.208 [trackPatch:Science] Preempted
2018-09-22T21:05:14.208Z,1537650314.208 [trackPatch:Science:G] Preempted
2018-09-22T21:05:14.208Z,1537650314.208 [trackPatch:Science:Read_Oil] Preempted
2018-09-22T21:05:14.208Z,1537650314.208 [trackPatch:Science:PeakDetectChl] Preempted
2018-09-22T21:05:14.208Z,1537650314.208 [trackPatch:I.Buoyancy] Preempted
2018-09-22T21:05:14.208Z,1537650314.208 [trackPatch:H.Pitch] Preempted
2018-09-22T21:05:14.208Z,1537650314.208 [trackPatch:G.WaterDepthEnvelope] Preempted
2018-09-22T21:05:14.209Z,1537650314.209 [trackPatch:F.OffshoreEnvelope] Preempted
2018-09-22T21:05:14.210Z,1537650314.210 [trackPatch:SurfaceCommsSplit:C:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-22T21:05:14.552Z,1537650314.552 [NAL9602](INFO): Powering up
2018-09-22T21:05:16.077Z,1537650316.077 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-22T21:05:25.744Z,1537650325.744 [NAL9602](INFO): NAL9602 initialized
2018-09-22T21:06:13.334Z,1537650373.334 [NAL9602](INFO): SBD MO Status=0, MOMSN=1153, MT Status=0, MTMSN=0
2018-09-22T21:06:13.334Z,1537650373.334 [NAL9602](INFO): No messages in MT queue
2018-09-22T21:07:25.638Z,1537650445.638 [NAL9602](INFO): GPS fix at 20180922T210714: (36.835066, -121.897941)
2018-09-22T21:07:25.698Z,1537650445.698 [trackPatch:SurfaceCommsSplit:C:A] Stopped
2018-09-22T21:07:25.698Z,1537650445.698 [trackPatch:SurfaceCommsSplit:C:B] Running Loop=1
2018-09-22T21:07:26.111Z,1537650446.111 [trackPatch:SurfaceCommsSplit:C:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-22T21:07:30.990Z,1537650450.990 [DataOverHttps](INFO): Sending 63 bytes from file Logs/20180922T190757/Courier0045.lzma
2018-09-22T21:07:31.785Z,1537650451.785 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0045.lzma.bak
2018-09-22T21:07:31.786Z,1537650451.786 [DataOverHttps](INFO): SBD MOMSN=8562878
2018-09-22T21:07:41.593Z,1537650461.593 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180922T190757/Courier0048.lzma
2018-09-22T21:07:42.388Z,1537650462.388 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0048.lzma.bak
2018-09-22T21:07:42.389Z,1537650462.389 [DataOverHttps](INFO): SBD MOMSN=8562883
2018-09-22T21:07:52.294Z,1537650472.294 [DataOverHttps](INFO): Sending 321 bytes from file Logs/20180922T190757/Express0046.lzma
2018-09-22T21:07:53.090Z,1537650473.090 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0046.lzma.bak
2018-09-22T21:07:53.090Z,1537650473.090 [DataOverHttps](INFO): SBD MOMSN=8562885
2018-09-22T21:08:02.086Z,1537650482.086 [NAL9602](INFO): Powering down
2018-09-22T21:08:02.252Z,1537650482.252 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180922T190757/Express0049.lzma
2018-09-22T21:08:03.040Z,1537650483.040 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0049.lzma.bak
2018-09-22T21:08:03.040Z,1537650483.040 [DataOverHttps](INFO): SBD MOMSN=8562899
2018-09-22T21:08:03.624Z,1537650483.624 [trackPatch:SurfaceCommsSplit:C:B] Stopped
2018-09-22T21:08:03.624Z,1537650483.624 [trackPatch:SurfaceCommsSplit:C:C] Running Loop=1
2018-09-22T21:08:03.891Z,1537650483.891 [trackPatch:SurfaceCommsSplit:C:C](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-22T21:08:07.046Z,1537650487.046 [NAL9602](INFO): Powering up
2018-09-22T21:08:17.970Z,1537650497.970 [NAL9602](INFO): NAL9602 initialized
2018-09-22T21:08:28.780Z,1537650508.780 [NAL9602](INFO): SBD MO Status=0, MOMSN=1154, MT Status=0, MTMSN=0
2018-09-22T21:08:28.780Z,1537650508.780 [NAL9602](INFO): No messages in MT queue
2018-09-22T21:09:26.667Z,1537650566.667 [NAL9602](INFO): GPS fix at 20180922T210916: (36.835108, -121.897964)
2018-09-22T21:09:26.736Z,1537650566.736 [trackPatch:SurfaceCommsSplit:C:C] Stopped
2018-09-22T21:09:26.736Z,1537650566.736 [trackPatch:SurfaceCommsSplit:C](INFO): Completed trackPatch:SurfaceCommsSplit:C
2018-09-22T21:09:26.736Z,1537650566.736 [trackPatch:SurfaceCommsSplit:C] Stopped
2018-09-22T21:09:26.736Z,1537650566.736 [trackPatch:SurfaceCommsSplit:C](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit:C
2018-09-22T21:09:26.742Z,1537650566.742 [trackPatch:SurfaceCommsSplit](INFO): Completed trackPatch:SurfaceCommsSplit
2018-09-22T21:09:26.742Z,1537650566.742 [trackPatch:SurfaceCommsSplit] Stopped
2018-09-22T21:09:26.742Z,1537650566.742 [trackPatch:SurfaceCommsSplit](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit
2018-09-22T21:09:26.742Z,1537650566.742 [trackPatch:SurfaceCommsSplit:A.GoToSurface] Stopped
2018-09-22T21:09:26.742Z,1537650566.742 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-22T21:09:26.744Z,1537650566.744 [trackPatch:PatchDetectHorizontal] Running Loop=1
2018-09-22T21:09:26.744Z,1537650566.744 [trackPatch:PatchDetectHorizontal](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal
2018-09-22T21:09:26.744Z,1537650566.744 [trackPatch:PatchDetectHorizontal:AssignPatchDetectOn] Running Loop=1
2018-09-22T21:09:27.128Z,1537650567.128 [trackPatch:PatchDetectHorizontal:AssignPatchDetectOn] Stopped
2018-09-22T21:09:27.129Z,1537650567.129 [trackPatch:PatchDetectHorizontal:C] Running Loop=1
2018-09-22T21:09:27.133Z,1537650567.133 [trackPatch:M.YoYo] Running Loop=1
2018-09-22T21:09:27.133Z,1537650567.133 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-22T21:09:27.134Z,1537650567.134 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-22T21:09:27.135Z,1537650567.135 [trackPatch:Science] Running Loop=1
2018-09-22T21:09:27.136Z,1537650567.136 [trackPatch:Science:PeakDetectChl] Running Loop=1
2018-09-22T21:09:27.141Z,1537650567.141 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-22T21:09:27.141Z,1537650567.141 [trackPatch:Science:G] Running Loop=1
2018-09-22T21:09:27.141Z,1537650567.141 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-22T21:09:27.142Z,1537650567.142 [trackPatch:H.Pitch] Running Loop=1
2018-09-22T21:09:27.142Z,1537650567.142 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-22T21:09:27.143Z,1537650567.143 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-22T21:09:27.513Z,1537650567.513 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-22T21:09:27.513Z,1537650567.513 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-22T21:09:27.528Z,1537650567.528 [trackPatch:PatchDetectHorizontal:C](IMPORTANT): Next: bearing for CrossLeg: -90.000000 arcdeg . WpMaxDistance = 1000.000000 m . Current lat, lon = 36.835108 arcdeg , -121.897964 arcdeg .
2018-09-22T21:09:27.530Z,1537650567.530 [trackPatch:PatchDetectHorizontal:C] Stopped
2018-09-22T21:09:27.530Z,1537650567.530 [trackPatch:PatchDetectHorizontal:CrossLeg] Running Loop=1
2018-09-22T21:09:27.530Z,1537650567.530 [trackPatch:PatchDetectHorizontal:CrossLeg](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal:CrossLeg
2018-09-22T21:09:27.530Z,1537650567.530 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint] Running Loop=1
2018-09-22T21:09:27.530Z,1537650567.530 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-22T21:09:27.531Z,1537650567.531 [trackPatch:PatchDetectHorizontal:PatchDetection] Running Loop=1
2018-09-22T21:09:27.531Z,1537650567.531 [trackPatch:PatchDetectHorizontal:PatchDetection](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal:PatchDetection
2018-09-22T21:09:27.531Z,1537650567.531 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal] Running Loop=1
2018-09-22T21:09:27.532Z,1537650567.532 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](INFO): Initialize.
2018-09-22T21:09:27.918Z,1537650567.918 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint] Stopped
2018-09-22T21:09:27.918Z,1537650567.918 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-22T21:09:27.918Z,1537650567.918 [trackPatch:PatchDetectHorizontal:CrossLeg:B] Running Loop=1
2018-09-22T21:09:27.918Z,1537650567.918 [trackPatch:PatchDetectHorizontal:CrossLeg:B](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal:CrossLeg:B
2018-09-22T21:09:28.323Z,1537650568.323 [trackPatch:SurfaceComms] Running Loop=1
2018-09-22T21:09:28.323Z,1537650568.323 [trackPatch:SurfaceComms](DEBUG): Aggregate::initialize trackPatch:SurfaceComms
2018-09-22T21:09:28.323Z,1537650568.323 [trackPatch:SurfaceComms:SurfaceComms] Running Loop=1
2018-09-22T21:09:28.323Z,1537650568.323 [trackPatch:SurfaceComms:SurfaceComms](DEBUG): Aggregate::initialize trackPatch:SurfaceComms:SurfaceComms
2018-09-22T21:09:28.324Z,1537650568.324 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface] Running Loop=1
2018-09-22T21:09:28.324Z,1537650568.324 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-22T21:09:28.324Z,1537650568.324 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-22T21:09:28.325Z,1537650568.325 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-22T21:09:28.325Z,1537650568.325 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-22T21:09:28.326Z,1537650568.326 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-22T21:09:28.326Z,1537650568.326 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-22T21:09:28.347Z,1537650568.347 [trackPatch:SurfaceComms:SurfaceComms:B] Running Loop=1
2018-09-22T21:09:28.347Z,1537650568.347 [trackPatch:SurfaceComms:SurfaceComms:B](DEBUG): Aggregate::initialize trackPatch:SurfaceComms:SurfaceComms:B
2018-09-22T21:09:28.348Z,1537650568.348 [trackPatch:SurfaceComms:SurfaceComms:B:A] Running Loop=1
2018-09-22T21:09:28.732Z,1537650568.732 [trackPatch:SurfaceComms:SurfaceComms:B] Stopped
2018-09-22T21:09:28.733Z,1537650568.733 [trackPatch:SurfaceComms:SurfaceComms:B](DEBUG): Aggregate::uninitialize trackPatch:SurfaceComms:SurfaceComms:B
2018-09-22T21:09:28.734Z,1537650568.734 [trackPatch:SurfaceComms:SurfaceComms:B:A] Stopped
2018-09-22T21:09:28.734Z,1537650568.734 [trackPatch:SurfaceComms:SurfaceComms:C] Running Loop=1
2018-09-22T21:09:28.734Z,1537650568.734 [trackPatch:SurfaceComms:SurfaceComms:C](DEBUG): Aggregate::initialize trackPatch:SurfaceComms:SurfaceComms:C
2018-09-22T21:09:28.734Z,1537650568.734 [trackPatch:SurfaceComms:SurfaceComms:C:A] Running Loop=1
2018-09-22T21:09:29.135Z,1537650569.135 [trackPatch:M.YoYo] Preempted
2018-09-22T21:09:29.135Z,1537650569.135 [trackPatch:L.DepthEnvelope] Preempted
2018-09-22T21:09:29.135Z,1537650569.135 [trackPatch:K.SetSpeed] Preempted
2018-09-22T21:09:29.135Z,1537650569.135 [trackPatch:Science] Preempted
2018-09-22T21:09:29.135Z,1537650569.135 [trackPatch:Science:G] Preempted
2018-09-22T21:09:29.135Z,1537650569.135 [trackPatch:Science:Read_Oil] Preempted
2018-09-22T21:09:29.135Z,1537650569.135 [trackPatch:Science:PeakDetectChl] Preempted
2018-09-22T21:09:29.135Z,1537650569.135 [trackPatch:I.Buoyancy] Preempted
2018-09-22T21:09:29.135Z,1537650569.135 [trackPatch:H.Pitch] Preempted
2018-09-22T21:09:29.135Z,1537650569.135 [trackPatch:G.WaterDepthEnvelope] Preempted
2018-09-22T21:09:29.135Z,1537650569.135 [trackPatch:F.OffshoreEnvelope] Preempted
2018-09-22T21:09:29.138Z,1537650569.138 [trackPatch:SurfaceComms:SurfaceComms:C:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-22T21:09:29.677Z,1537650569.677 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-22T21:09:30.687Z,1537650570.687 [NAL9602](INFO): GPS fix at 20180922T210920: (36.835108, -121.897957)
2018-09-22T21:09:30.762Z,1537650570.762 [trackPatch:SurfaceComms:SurfaceComms:C:A] Stopped
2018-09-22T21:09:30.762Z,1537650570.762 [trackPatch:SurfaceComms:SurfaceComms:C:B] Running Loop=1
2018-09-22T21:09:31.145Z,1537650571.145 [trackPatch:SurfaceComms:SurfaceComms:C:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-22T21:09:35.316Z,1537650575.316 [DataOverHttps](INFO): Sending 62 bytes from file Logs/20180922T190757/Courier0051.lzma
2018-09-22T21:09:36.077Z,1537650576.077 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0051.lzma.bak
2018-09-22T21:09:36.077Z,1537650576.077 [DataOverHttps](INFO): SBD MOMSN=8562901
2018-09-22T21:09:45.155Z,1537650585.155 [DataOverHttps](INFO): Sending 225 bytes from file Logs/20180922T190757/Express0052.lzma
2018-09-22T21:09:45.925Z,1537650585.925 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0052.lzma.bak
2018-09-22T21:09:45.925Z,1537650585.925 [DataOverHttps](INFO): SBD MOMSN=8562904
2018-09-22T21:09:46.453Z,1537650586.453 [trackPatch:SurfaceComms:SurfaceComms:C:B] Stopped
2018-09-22T21:09:46.453Z,1537650586.453 [trackPatch:SurfaceComms:SurfaceComms:C:C] Running Loop=1
2018-09-22T21:09:46.787Z,1537650586.787 [trackPatch:SurfaceComms:SurfaceComms:C:C](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-22T21:09:50.887Z,1537650590.887 [NAL9602](INFO): GPS fix at 20180922T210940: (36.835117, -121.897956)
2018-09-22T21:09:50.945Z,1537650590.945 [trackPatch:SurfaceComms:SurfaceComms:C:C] Stopped
2018-09-22T21:09:50.945Z,1537650590.945 [trackPatch:SurfaceComms:SurfaceComms:C](INFO): Completed trackPatch:SurfaceComms:SurfaceComms:C
2018-09-22T21:09:50.945Z,1537650590.945 [trackPatch:SurfaceComms:SurfaceComms:C] Stopped
2018-09-22T21:09:50.945Z,1537650590.945 [trackPatch:SurfaceComms:SurfaceComms:C](DEBUG): Aggregate::uninitialize trackPatch:SurfaceComms:SurfaceComms:C
2018-09-22T21:09:50.946Z,1537650590.946 [trackPatch:SurfaceComms:SurfaceComms](INFO): Completed trackPatch:SurfaceComms:SurfaceComms
2018-09-22T21:09:50.946Z,1537650590.946 [trackPatch:SurfaceComms:SurfaceComms] Stopped
2018-09-22T21:09:50.947Z,1537650590.947 [trackPatch:SurfaceComms:SurfaceComms](DEBUG): Aggregate::uninitialize trackPatch:SurfaceComms:SurfaceComms
2018-09-22T21:09:50.947Z,1537650590.947 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface] Stopped
2018-09-22T21:09:50.947Z,1537650590.947 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-22T21:09:50.947Z,1537650590.947 [trackPatch:SurfaceComms](INFO): Completed trackPatch:SurfaceComms
2018-09-22T21:09:50.947Z,1537650590.947 [trackPatch:SurfaceComms] Stopped
2018-09-22T21:09:50.947Z,1537650590.947 [trackPatch:SurfaceComms](DEBUG): Aggregate::uninitialize trackPatch:SurfaceComms
2018-09-22T21:09:51.324Z,1537650591.324 [trackPatch:PatchDetectHorizontal:CrossLeg:B](INFO): Completed trackPatch:PatchDetectHorizontal:CrossLeg:B
2018-09-22T21:09:51.324Z,1537650591.324 [trackPatch:PatchDetectHorizontal:CrossLeg:B] Stopped
2018-09-22T21:09:51.324Z,1537650591.324 [trackPatch:PatchDetectHorizontal:CrossLeg:B](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal:CrossLeg:B
2018-09-22T21:09:51.324Z,1537650591.324 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint] Running Loop=1
2018-09-22T21:09:51.324Z,1537650591.324 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-22T21:09:51.326Z,1537650591.326 [trackPatch:M.YoYo] Running Loop=1
2018-09-22T21:09:51.326Z,1537650591.326 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-22T21:09:51.327Z,1537650591.327 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-22T21:09:51.327Z,1537650591.327 [trackPatch:Science] Running Loop=1
2018-09-22T21:09:51.333Z,1537650591.333 [trackPatch:Science:PeakDetectChl] Running Loop=1
2018-09-22T21:09:51.334Z,1537650591.334 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-22T21:09:51.334Z,1537650591.334 [trackPatch:Science:G] Running Loop=1
2018-09-22T21:09:51.334Z,1537650591.334 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-22T21:09:51.335Z,1537650591.335 [trackPatch:H.Pitch] Running Loop=1
2018-09-22T21:09:51.335Z,1537650591.335 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-22T21:09:51.335Z,1537650591.335 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-22T21:09:51.518Z,1537650591.518 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-22T21:09:51.519Z,1537650591.519 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-22T21:09:51.700Z,1537650591.700 [RDI_Pathfinder](ERROR): Failed to parse:
:BS,-32768,-32768,-32768,V
2018-09-22T21:10:21.283Z,1537650621.283 [Radio_Surface](INFO): Powering down
2018-09-22T21:10:23.278Z,1537650623.278 [NAL9602](INFO): Powering down
2018-09-22T21:11:16.471Z,1537650676.471 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T21:12:16.868Z,1537650736.868 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T21:12:52.868Z,1537650772.868 [DataOverHttps](INFO): setting unavailable, lastComms_.elapsed()=180.377243
2018-09-22T21:14:17.271Z,1537650857.271 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T21:15:17.271Z,1537650917.271 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T21:16:18.068Z,1537650978.068 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T21:17:18.471Z,1537651038.471 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T21:18:18.868Z,1537651098.868 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T21:19:18.872Z,1537651158.872 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T21:20:19.268Z,1537651219.268 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T21:21:19.668Z,1537651279.668 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T21:22:19.671Z,1537651339.671 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T21:22:59.703Z,1537651379.703 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-22T21:22:59.703Z,1537651379.703 [RDI_Pathfinder](ERROR): Failed to parse:
:TSI,-32768,-32768,-32768,-32768,V
2018-09-22T21:23:19.668Z,1537651399.668 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T21:24:20.068Z,1537651460.068 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T21:25:02.116Z,1537651502.116 [BPC1](FAULT): Battery stick #10 (s/n: 0145) reported OVER_TEMP_ALARM. Status code: 0x1717.
2018-09-22T21:25:02.117Z,1537651502.117 [BPC1](INFO): Calculating totals. Valid battery stick count: 55. Valid reserve battery stick count: 6.
2018-09-22T21:25:20.468Z,1537651520.468 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T21:26:20.470Z,1537651580.470 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T21:26:32.912Z,1537651592.912 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint] Stopped
2018-09-22T21:26:32.912Z,1537651592.912 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-22T21:26:32.912Z,1537651592.912 [trackPatch:PatchDetectHorizontal:CrossLeg:D] Running Loop=1
2018-09-22T21:26:33.314Z,1537651593.314 [trackPatch:PatchDetectHorizontal:CrossLeg:D](IMPORTANT): CrossPeakWp done. Lat, lon = 36.834789 arcdeg , -121.908017 arcdeg . Patch value is nan ug/l at nan arcdeg , nan arcdeg distance = 0.000000 m 
2018-09-22T21:26:33.315Z,1537651593.315 [trackPatch:PatchDetectHorizontal:CrossLeg:D] Stopped
2018-09-22T21:26:33.316Z,1537651593.316 [trackPatch:PatchDetectHorizontal:CrossLeg:AssignPatchDetectOffInCrossLeg] Running Loop=1
2018-09-22T21:26:33.725Z,1537651593.725 [trackPatch:PatchDetectHorizontal:CrossLeg:AssignPatchDetectOffInCrossLeg] Stopped
2018-09-22T21:26:33.725Z,1537651593.725 [trackPatch:PatchDetectHorizontal:CrossLeg:AssignWpDoneInCrossLeg] Running Loop=1
2018-09-22T21:26:34.117Z,1537651594.117 [trackPatch:PatchDetectHorizontal:CrossLeg] Stopped
2018-09-22T21:26:34.117Z,1537651594.117 [trackPatch:PatchDetectHorizontal:CrossLeg](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal:CrossLeg
2018-09-22T21:26:34.117Z,1537651594.117 [trackPatch:PatchDetectHorizontal:CrossLeg:AssignWpDoneInCrossLeg] Stopped
2018-09-22T21:26:34.117Z,1537651594.117 [trackPatch:PatchDetectHorizontal:AssignWpBearingForInLeg] Running Loop=1
2018-09-22T21:26:34.519Z,1537651594.519 [trackPatch:PatchDetectHorizontal:AssignWpBearingForInLeg] Stopped
2018-09-22T21:26:34.519Z,1537651594.519 [trackPatch:PatchDetectHorizontal:F] Running Loop=1
2018-09-22T21:26:34.941Z,1537651594.941 [trackPatch:PatchDetectHorizontal:F](IMPORTANT): Next: bearing for InLeg: 90.000000 arcdeg . Current lat, lon = 36.834789 arcdeg , -121.908034 arcdeg . Patch value is nan ug/l at nan arcdeg , nan arcdeg distance = 0.000000 m .
2018-09-22T21:26:34.943Z,1537651594.943 [trackPatch:PatchDetectHorizontal:F] Stopped
2018-09-22T21:26:34.943Z,1537651594.943 [trackPatch:PatchDetectHorizontal:InLegWp.Waypoint] Running Loop=1
2018-09-22T21:26:34.943Z,1537651594.943 [trackPatch:PatchDetectHorizontal:InLegWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-22T21:26:35.346Z,1537651595.346 [trackPatch:PatchDetectHorizontal:InLegWp.Waypoint] Stopped
2018-09-22T21:26:35.346Z,1537651595.346 [trackPatch:PatchDetectHorizontal:InLegWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-22T21:26:35.346Z,1537651595.346 [trackPatch:PatchDetectHorizontal:AssignWpBearingForOutLeg] Running Loop=1
2018-09-22T21:26:35.756Z,1537651595.756 [trackPatch:PatchDetectHorizontal:AssignWpBearingForOutLeg] Stopped
2018-09-22T21:26:35.756Z,1537651595.756 [trackPatch:PatchDetectHorizontal:I] Running Loop=1
2018-09-22T21:26:36.138Z,1537651596.138 [trackPatch:PatchDetectHorizontal:I](IMPORTANT): Next: bearing for OutLeg: 0.000000 arcdeg . WpMaxDistance = 1000.000000 m . Current lat, lon = 36.834789 arcdeg , -121.908047 arcdeg . Patch value is nan ug/l at nan arcdeg , nan arcdeg distance = 0.000000 m .
2018-09-22T21:26:36.139Z,1537651596.139 [trackPatch:PatchDetectHorizontal:I] Stopped
2018-09-22T21:26:36.139Z,1537651596.139 [trackPatch:PatchDetectHorizontal:J] Running Loop=1
2018-09-22T21:26:36.139Z,1537651596.139 [trackPatch:PatchDetectHorizontal:J](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal:J
2018-09-22T21:26:36.552Z,1537651596.552 [trackPatch:SurfaceCommsSplit] Running Loop=1
2018-09-22T21:26:36.552Z,1537651596.552 [trackPatch:SurfaceCommsSplit](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit
2018-09-22T21:26:36.552Z,1537651596.552 [trackPatch:SurfaceCommsSplit:A.GoToSurface] Running Loop=1
2018-09-22T21:26:36.552Z,1537651596.552 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-22T21:26:36.553Z,1537651596.553 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-22T21:26:36.553Z,1537651596.553 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-22T21:26:36.554Z,1537651596.554 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-22T21:26:36.554Z,1537651596.554 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-22T21:26:36.554Z,1537651596.554 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-22T21:27:04.952Z,1537651624.952 [trackPatch:SurfaceCommsSplit:B] Running Loop=1
2018-09-22T21:27:04.952Z,1537651624.952 [trackPatch:SurfaceCommsSplit:B](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit:B
2018-09-22T21:27:04.952Z,1537651624.952 [trackPatch:SurfaceCommsSplit:B:A] Running Loop=1
2018-09-22T21:27:05.134Z,1537651625.134 [Radio_Surface](INFO): Powering up
2018-09-22T21:27:05.331Z,1537651625.331 [trackPatch:SurfaceCommsSplit:B:A](INFO): ##UnpackSplit##
2018-09-22T21:27:05.331Z,1537651625.331 [trackPatch:SurfaceCommsSplit:B:A] Stopped
2018-09-22T21:27:05.331Z,1537651625.331 [trackPatch:SurfaceCommsSplit:B](INFO): Completed trackPatch:SurfaceCommsSplit:B
2018-09-22T21:27:05.331Z,1537651625.331 [trackPatch:SurfaceCommsSplit:B] Stopped
2018-09-22T21:27:05.332Z,1537651625.332 [trackPatch:SurfaceCommsSplit:B](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit:B
2018-09-22T21:27:05.332Z,1537651625.332 [trackPatch:SurfaceCommsSplit:C] Running Loop=1
2018-09-22T21:27:05.332Z,1537651625.332 [trackPatch:SurfaceCommsSplit:C](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit:C
2018-09-22T21:27:05.332Z,1537651625.332 [trackPatch:SurfaceCommsSplit:C:A] Running Loop=1
2018-09-22T21:27:05.703Z,1537651625.703 [trackPatch:M.YoYo] Preempted
2018-09-22T21:27:05.703Z,1537651625.703 [trackPatch:L.DepthEnvelope] Preempted
2018-09-22T21:27:05.704Z,1537651625.704 [trackPatch:K.SetSpeed] Preempted
2018-09-22T21:27:05.704Z,1537651625.704 [trackPatch:Science] Preempted
2018-09-22T21:27:05.721Z,1537651625.721 [trackPatch:Science:G] Preempted
2018-09-22T21:27:05.721Z,1537651625.721 [trackPatch:Science:Read_Oil] Preempted
2018-09-22T21:27:05.721Z,1537651625.721 [trackPatch:Science:PeakDetectChl] Preempted
2018-09-22T21:27:05.722Z,1537651625.722 [trackPatch:I.Buoyancy] Preempted
2018-09-22T21:27:05.722Z,1537651625.722 [trackPatch:H.Pitch] Preempted
2018-09-22T21:27:05.722Z,1537651625.722 [trackPatch:G.WaterDepthEnvelope] Preempted
2018-09-22T21:27:05.722Z,1537651625.722 [trackPatch:F.OffshoreEnvelope] Preempted
2018-09-22T21:27:05.889Z,1537651625.889 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-22T21:27:06.066Z,1537651626.066 [NAL9602](INFO): Powering up
2018-09-22T21:27:15.421Z,1537651635.421 [BuoyancyServo](ERROR): getPosition uart error serial timeout
2018-09-22T21:27:15.421Z,1537651635.421 [BuoyancyServo](FAULT): Buoyancy getPosition uart error.serial timeout
2018-09-22T21:27:15.421Z,1537651635.421 [BuoyancyServo] Communications Fault, FailCount= 1
2018-09-22T21:27:15.421Z,1537651635.421 [BuoyancyServo](ERROR): Communications Fault
2018-09-22T21:27:15.427Z,1537651635.427 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-09-22T21:27:15.524Z,1537651635.524 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-22T21:27:15.525Z,1537651635.525 [BuoyancyServo](INFO): Powering down
2018-09-22T21:27:17.050Z,1537651637.050 [NAL9602](INFO): NAL9602 initialized
2018-09-22T21:27:17.121Z,1537651637.121 [BuoyancyServo](FAULT): LCB fault:  Current Limiter Activated.
2018-09-22T21:27:17.121Z,1537651637.121 [BuoyancyServo] Hardware Fault, FailCount= 1
2018-09-22T21:27:17.121Z,1537651637.121 [BuoyancyServo](ERROR): Hardware Fault
2018-09-22T21:27:17.539Z,1537651637.539 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-22T21:27:17.539Z,1537651637.539 [BuoyancyServo] No Fault, FailCount= 1
2018-09-22T21:27:17.911Z,1537651637.911 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-22T21:27:18.030Z,1537651638.030 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-22T21:27:20.644Z,1537651640.644 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T21:27:24.938Z,1537651644.938 [Radio_Surface](INFO): Powering down
2018-09-22T21:27:30.998Z,1537651650.998 [Radio_Surface](INFO): Powering up
2018-09-22T21:27:56.779Z,1537651676.779 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-22T21:27:56.779Z,1537651676.779 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-3276,V
2018-09-22T21:27:57.560Z,1537651677.560 [NAL9602](INFO): SBD MO Status=0, MOMSN=1155, MT Status=0, MTMSN=0
2018-09-22T21:27:57.560Z,1537651677.560 [NAL9602](INFO): No messages in MT queue
2018-09-22T21:28:09.595Z,1537651689.595 [RDI_Pathfinder](ERROR): Failed to parse::SA,   +0.00,   +0.00,  0.00
2018-09-22T21:28:20.752Z,1537651700.752 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T21:29:20.756Z,1537651760.756 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T21:30:20.755Z,1537651820.755 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T21:30:55.750Z,1537651855.750 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.002946
2018-09-22T21:32:22.470Z,1537651942.470 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for altitude
2018-09-22T21:32:22.470Z,1537651942.470 [RDI_Pathfinder](ERROR): Failed to parse:
:BD,        +0.00,        +0.00,     ,   0.00,1665.88
2018-09-22T21:33:48.776Z,1537652028.776 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-22T21:33:48.776Z,1537652028.776 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092214392243,35.0, 0.0,1448.9,  0
2018-09-22T21:34:56.636Z,1537652096.636 [RDI_Pathfinder](ERROR): Failed to parse:
:BE,-32768,-32768,-32768,V
2018-09-22T21:35:13.456Z,1537652113.456 [trackPatch](INFO): Timed out from 2018-09-22T21:05:13.4Z
2018-09-22T21:35:13.456Z,1537652113.456 [MissionManager](INFO): trackPatch is completed.
2018-09-22T21:35:13.456Z,1537652113.456 [MissionManager](INFO): Uninitializing Mission trackPatch
2018-09-22T21:35:13.456Z,1537652113.456 [trackPatch] Stopped
2018-09-22T21:35:13.456Z,1537652113.456 [trackPatch](DEBUG): Aggregate::uninitialize trackPatch
2018-09-22T21:35:13.456Z,1537652113.456 [trackPatch:A.AltitudeEnvelope] Stopped
2018-09-22T21:35:13.456Z,1537652113.456 [trackPatch:A.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-22T21:35:13.457Z,1537652113.457 [trackPatch:B.DepthEnvelope] Stopped
2018-09-22T21:35:13.457Z,1537652113.457 [trackPatch:B.DepthEnvelope](DEBUG): Uninitialize.
2018-09-22T21:35:13.457Z,1537652113.457 [trackPatch:SurfaceCommsSplit] Stopped
2018-09-22T21:35:13.457Z,1537652113.457 [trackPatch:SurfaceCommsSplit](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit
2018-09-22T21:35:13.457Z,1537652113.457 [trackPatch:SurfaceCommsSplit:A.GoToSurface] Stopped
2018-09-22T21:35:13.457Z,1537652113.457 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-22T21:35:13.457Z,1537652113.457 [trackPatch:SurfaceCommsSplit:C] Stopped
2018-09-22T21:35:13.457Z,1537652113.457 [trackPatch:SurfaceCommsSplit:C](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit:C
2018-09-22T21:35:13.457Z,1537652113.457 [trackPatch:SurfaceCommsSplit:C:A] Stopped
2018-09-22T21:35:13.458Z,1537652113.458 [trackPatch:F.OffshoreEnvelope] Stopped
2018-09-22T21:35:13.458Z,1537652113.458 [trackPatch:F.OffshoreEnvelope](DEBUG): Uninitialize OffshoreEnvelopeComponent.
2018-09-22T21:35:13.458Z,1537652113.458 [trackPatch:G.WaterDepthEnvelope] Stopped
2018-09-22T21:35:13.458Z,1537652113.458 [trackPatch:G.WaterDepthEnvelope](DEBUG): Uninitialize WaterDepthEnvelopeComponent.
2018-09-22T21:35:13.458Z,1537652113.458 [trackPatch:H.Pitch] Stopped
2018-09-22T21:35:13.458Z,1537652113.458 [trackPatch:I.Buoyancy] Stopped
2018-09-22T21:35:13.458Z,1537652113.458 [trackPatch:I.Buoyancy](DEBUG): Uninitialize Buoyancy Component.
2018-09-22T21:35:13.458Z,1537652113.458 [trackPatch:Science] Stopped
2018-09-22T21:35:13.458Z,1537652113.458 [trackPatch:Science](DEBUG): Aggregate::uninitialize trackPatch:Science
2018-09-22T21:35:13.458Z,1537652113.458 [trackPatch:Science:G] Stopped
2018-09-22T21:35:13.458Z,1537652113.458 [trackPatch:Science:Read_Oil] Stopped
2018-09-22T21:35:13.459Z,1537652113.459 [trackPatch:Science:PeakDetectChl] Stopped
2018-09-22T21:35:13.459Z,1537652113.459 [trackPatch:Science:PeakDetectChl](DEBUG): Aggregate::uninitialize trackPatch:Science:PeakDetectChl
2018-09-22T21:35:13.459Z,1537652113.459 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2018-09-22T21:35:13.459Z,1537652113.459 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-22T21:35:13.459Z,1537652113.459 [trackPatch:K.SetSpeed] Stopped
2018-09-22T21:35:13.459Z,1537652113.459 [trackPatch:K.SetSpeed](DEBUG): Uninitialize.
2018-09-22T21:35:13.459Z,1537652113.459 [trackPatch:L.DepthEnvelope] Stopped
2018-09-22T21:35:13.459Z,1537652113.459 [trackPatch:L.DepthEnvelope](DEBUG): Uninitialize.
2018-09-22T21:35:13.459Z,1537652113.459 [trackPatch:M.YoYo] Stopped
2018-09-22T21:35:13.459Z,1537652113.459 [trackPatch:M.YoYo](DEBUG): Uninitialize YoYoComponent.
2018-09-22T21:35:13.459Z,1537652113.459 [trackPatch:PatchDetectHorizontal] Stopped
2018-09-22T21:35:13.460Z,1537652113.460 [trackPatch:PatchDetectHorizontal](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal
2018-09-22T21:35:13.460Z,1537652113.460 [trackPatch:PatchDetectHorizontal:PatchDetection] Stopped
2018-09-22T21:35:13.460Z,1537652113.460 [trackPatch:PatchDetectHorizontal:PatchDetection](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal:PatchDetection
2018-09-22T21:35:13.460Z,1537652113.460 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal] Stopped
2018-09-22T21:35:13.460Z,1537652113.460 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-22T21:35:13.460Z,1537652113.460 [trackPatch:PatchDetectHorizontal:J] Stopped
2018-09-22T21:35:13.460Z,1537652113.460 [trackPatch:PatchDetectHorizontal:J](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal:J
2018-09-22T21:35:13.852Z,1537652113.852 [MissionManager](IMPORTANT): Started mission Default
2018-09-22T21:35:13.852Z,1537652113.852 [Default] Running Loop=1
2018-09-22T21:35:13.853Z,1537652113.853 [Default](DEBUG): Aggregate::initialize Default
2018-09-22T21:35:13.857Z,1537652113.857 [Default:B.GoToSurface] Running Loop=1
2018-09-22T21:35:13.857Z,1537652113.857 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-22T21:35:13.857Z,1537652113.857 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-22T21:35:13.858Z,1537652113.858 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-22T21:35:13.858Z,1537652113.858 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-22T21:35:13.858Z,1537652113.858 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-22T21:35:13.859Z,1537652113.859 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-22T21:35:13.859Z,1537652113.859 [Default:A.Wait] Running Loop=1
2018-09-22T21:35:13.859Z,1537652113.859 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-22T21:35:27.024Z,1537652127.024 [Default:A.Wait](INFO): Done Waiting.
2018-09-22T21:35:27.025Z,1537652127.025 [Default:A.Wait] Stopped
2018-09-22T21:35:27.025Z,1537652127.025 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-22T21:35:27.453Z,1537652127.453 [Default:CheckIn] Running Loop=1
2018-09-22T21:35:27.453Z,1537652127.453 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-22T21:35:27.453Z,1537652127.453 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-22T21:36:07.574Z,1537652167.574 [NAL9602](INFO): GPS fix at 20180922T213557: (36.834647, -121.909729)
2018-09-22T21:36:07.640Z,1537652167.640 [UniversalFixResidualReporter](INFO): Fix residual: 12.4 %DT, over the last 982.7 m. Residual distance 122.1 m at bearing 81.0 degrees. Fix at (36.8346, -121.9097) with 1049.1 m made good.
2018-09-22T21:36:07.645Z,1537652167.645 [Default:CheckIn:Read_GPS] Stopped
2018-09-22T21:36:07.646Z,1537652167.646 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-22T21:36:12.226Z,1537652172.226 [DataOverHttps](INFO): Sending 90 bytes from file Logs/20180922T190757/Courier0054.lzma
2018-09-22T21:36:12.981Z,1537652172.981 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0054.lzma.bak
2018-09-22T21:36:12.982Z,1537652172.982 [DataOverHttps](INFO): SBD MOMSN=8563025
2018-09-22T21:36:22.150Z,1537652182.150 [DataOverHttps](INFO): Sending 1559 bytes from file Logs/20180922T190757/Express0055.lzma
2018-09-22T21:36:22.914Z,1537652182.914 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0055.lzma.bak
2018-09-22T21:36:22.914Z,1537652182.914 [DataOverHttps](INFO): SBD MOMSN=8563028
2018-09-22T21:36:23.446Z,1537652183.446 [Default:CheckIn:Read_Iridium] Stopped
2018-09-22T21:36:23.446Z,1537652183.446 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-22T21:36:23.446Z,1537652183.446 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-22T21:36:42.316Z,1537652202.316 [NAL9602](INFO): Powering down
2018-09-22T21:41:23.907Z,1537652483.907 [Default:CheckIn:C.Wait](INFO): Done Waiting.
2018-09-22T21:41:23.907Z,1537652483.907 [Default:CheckIn:C.Wait] Stopped
2018-09-22T21:41:23.907Z,1537652483.907 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-22T21:41:23.908Z,1537652483.908 [Default:CheckIn:D] Running Loop=1
2018-09-22T21:41:24.299Z,1537652484.299 [Default:CheckIn:D] Stopped
2018-09-22T21:41:24.299Z,1537652484.299 [Default:CheckIn:E] Running Loop=1
2018-09-22T21:41:24.714Z,1537652484.714 [Default:CheckIn:E](IMPORTANT): Default mission has been running for 6.174104 min 
2018-09-22T21:41:24.714Z,1537652484.714 [Default:CheckIn:E] Stopped
2018-09-22T21:41:24.715Z,1537652484.715 [Default:CheckIn](INFO): Completed Default:CheckIn
2018-09-22T21:41:24.715Z,1537652484.715 [Default:CheckIn] Stopped
2018-09-22T21:41:24.715Z,1537652484.715 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-22T21:41:24.716Z,1537652484.716 [Default:CheckIn](INFO): Running loop #2
2018-09-22T21:41:24.716Z,1537652484.716 [Default:CheckIn] Running Loop=2
2018-09-22T21:41:24.716Z,1537652484.716 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-22T21:41:24.716Z,1537652484.716 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-22T21:41:28.244Z,1537652488.244 [NAL9602](INFO): Powering up
2018-09-22T21:41:39.138Z,1537652499.138 [NAL9602](INFO): NAL9602 initialized
2018-09-22T21:41:46.767Z,1537652506.767 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-22T21:41:46.767Z,1537652506.767 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-

2018-09-22T21:41:55.142Z,1537652515.142 [NAL9602](INFO): SBD MO Status=0, MOMSN=1156, MT Status=0, MTMSN=0
2018-09-22T21:41:55.143Z,1537652515.143 [NAL9602](INFO): No messages in MT queue
2018-09-22T21:43:29.227Z,1537652609.227 [DataOverHttps](IMPORTANT): SBD MTMSN=20180922T214318
2018-09-22T21:43:33.447Z,1537652613.447 [DataOverHttps](INFO): Received command:load Science/trackPatch.xml;set trackPatch.MissionTimeout 30 min;set trackPatch.YoYoMinDepth 2 m;set trackPatch.YoYoMaxDepth 10 m;set trackPatch.PeakChlShallowBnd 3 m;set trackPatch.PeakChlDeepBnd 8 m;run
2018-09-22T21:43:33.474Z,1537652613.474 [CommandLine](IMPORTANT): got command load ./Missions/Science/trackPatch.xml
2018-09-22T21:43:33.474Z,1537652613.474 [MissionManager](INFO): Loading Mission: ./Missions/Science/trackPatch.xml
2018-09-22T21:43:33.730Z,1537652613.730 [MissionManager](INFO): DefineArg trackPatch.MinAltitude = 5.000000 m
2018-09-22T21:43:33.732Z,1537652613.732 [MissionManager](INFO): DefineArg trackPatch.MaxDepth = 65.000000 m
2018-09-22T21:43:33.734Z,1537652613.734 [MissionManager](INFO): DefineArg trackPatch.MinWaterDepth = 10.000000 m
2018-09-22T21:43:33.737Z,1537652613.737 [MissionManager](INFO): DefineArg trackPatch.MinOffshore = 2000.000000 m
2018-09-22T21:43:33.739Z,1537652613.739 [MissionManager](INFO): DefineArg trackPatch.NeedCommsTime = 180.000000 min
2018-09-22T21:43:33.741Z,1537652613.741 [MissionManager](INFO): DefineArg trackPatch.MissionTimeout = 56.000000 h
2018-09-22T21:43:33.744Z,1537652613.744 [MissionManager](INFO): DefineArg trackPatch.MassDefault = 0.000000 cm
2018-09-22T21:43:33.747Z,1537652613.747 [MissionManager](INFO): DefineArg trackPatch.BuoyancyNeutral = 205.000004 cc
2018-09-22T21:43:33.749Z,1537652613.749 [MissionManager](INFO): DefineArg trackPatch.YoYoMinDepth = 3.000000 m
2018-09-22T21:43:33.751Z,1537652613.751 [MissionManager](INFO): DefineArg trackPatch.YoYoMaxDepth = 30.000000 m
2018-09-22T21:43:33.754Z,1537652613.754 [MissionManager](INFO): DefineArg trackPatch.YoYoUpPitch = 20.000000 arcdeg
2018-09-22T21:43:33.756Z,1537652613.756 [MissionManager](INFO): DefineArg trackPatch.YoYoDownPitch = -20.000000 arcdeg
2018-09-22T21:43:33.758Z,1537652613.758 [MissionManager](INFO): DefineArg trackPatch.Speed = 1.000000 m/s
2018-09-22T21:43:33.760Z,1537652613.760 [MissionManager](INFO): DefineArg trackPatch.WpMaxDistance = 1000.000000 m
2018-09-22T21:43:33.789Z,1537652613.789 [MissionManager](INFO): DefineArg trackPatch.WpTimeout = 8000.000000 s
2018-09-22T21:43:33.791Z,1537652613.791 [MissionManager](INFO): DefineArg trackPatch.WaterFrame = 1 bool
2018-09-22T21:43:33.794Z,1537652613.794 [MissionManager](INFO): DefineArg trackPatch.Repeat = 20.000000 count
2018-09-22T21:43:33.796Z,1537652613.796 [MissionManager](INFO): DefineArg trackPatch.Turn = 90.000000 arcdeg
2018-09-22T21:43:33.816Z,1537652613.816 [MissionManager](INFO): DefineArg trackPatch.Reverse = 180.000000 arcdeg
2018-09-22T21:43:33.818Z,1537652613.818 [MissionManager](INFO): DefineArg trackPatch.TwoPi = 360.000000 arcdeg
2018-09-22T21:43:33.820Z,1537652613.820 [MissionManager](INFO): DefineArg trackPatch.LowPassWindowLen = 20.000000 count
2018-09-22T21:43:33.823Z,1537652613.823 [MissionManager](INFO): DefineArg trackPatch.PeakChlShallowBnd = 10.000000 m
2018-09-22T21:43:33.849Z,1537652613.849 [MissionManager](INFO): DefineArg trackPatch.PeakChlDeepBnd = 20.000000 m
2018-09-22T21:43:33.851Z,1537652613.851 [MissionManager](INFO): DefineArg trackPatch.FilterWidth = 4.000000 count
2018-09-22T21:43:33.853Z,1537652613.853 [MissionManager](INFO): DefineArg trackPatch.BeginThreshold = nan ug/l
2018-09-22T21:43:33.856Z,1537652613.856 [MissionManager](INFO): DefineArg trackPatch.OffPeakFraction = 80.000000 %
2018-09-22T21:43:33.873Z,1537652613.873 [MissionManager](INFO): DefineArg trackPatch.PatchMode = 0 bool
2018-09-22T21:43:33.875Z,1537652613.875 [MissionManager](INFO): DefineArg trackPatch.WpBearing = -90.000000 arcdeg
2018-09-22T21:43:33.877Z,1537652613.877 [MissionManager](INFO): DefineOutput trackPatch.PatchDetectOn = 0 bool
2018-09-22T21:43:33.879Z,1537652613.879 [MissionManager](INFO): DefineOutput trackPatch.WpDone = 0 bool
2018-09-22T21:43:33.904Z,1537652613.904 [MissionManager](INFO): DefineOutput trackPatch.PatchChl = nan ug/l
2018-09-22T21:43:33.906Z,1537652613.906 [MissionManager](INFO): DefineOutput trackPatch.PatchChlDepth = nan m
2018-09-22T21:43:33.908Z,1537652613.908 [MissionManager](INFO): DefineOutput trackPatch.PatchChlLatitude = nan arcdeg
2018-09-22T21:43:33.911Z,1537652613.911 [MissionManager](INFO): DefineOutput trackPatch.PatchChlLongitude = nan arcdeg
2018-09-22T21:43:33.928Z,1537652613.928 [MissionManager](INFO): DefineOutput trackPatch.PatchChlDistance = 0.000000 m
2018-09-22T21:43:33.929Z,1537652613.929 [trackPatch:A.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-22T21:43:33.935Z,1537652613.935 [trackPatch:B.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-22T21:43:33.955Z,1537652613.955 [MissionManager](INFO): Inserting Stack: Missions/Insert/Surface.xml
2018-09-22T21:43:34.013Z,1537652614.013 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.SurfaceDepthRate = nan m/s
2018-09-22T21:43:34.016Z,1537652614.016 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.SurfacePitch = 20.000000 arcdeg
2018-09-22T21:43:34.040Z,1537652614.040 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.SurfaceSpeed = 1.000000 m/s
2018-09-22T21:43:34.042Z,1537652614.042 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.IridiumTimeout = 30.000000 min
2018-09-22T21:43:34.044Z,1537652614.044 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.UnpackSplitAtSurface = 0 bool
2018-09-22T21:43:34.045Z,1537652614.045 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-22T21:43:34.072Z,1537652614.072 [MissionManager](INFO): RedefineArg trackPatch:SurfaceCommsSplit.SurfacePitch = value:20.000000 arcdeg
2018-09-22T21:43:34.086Z,1537652614.086 [MissionManager](INFO): RedefineArg trackPatch:SurfaceCommsSplit.SurfaceSpeed = value:1.000000 m/s
2018-09-22T21:43:34.088Z,1537652614.088 [MissionManager](INFO): RedefineArg trackPatch:SurfaceCommsSplit.UnpackSplitAtSurface = value:1 bool
2018-09-22T21:43:34.089Z,1537652614.089 [MissionManager](INFO): Inserting Stack: Missions/Insert/Surface.xml
2018-09-22T21:43:34.123Z,1537652614.123 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.SurfaceDepthRate = nan m/s
2018-09-22T21:43:34.125Z,1537652614.125 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.SurfacePitch = 20.000000 arcdeg
2018-09-22T21:43:34.127Z,1537652614.127 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.SurfaceSpeed = 1.000000 m/s
2018-09-22T21:43:34.129Z,1537652614.129 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.IridiumTimeout = 30.000000 min
2018-09-22T21:43:34.131Z,1537652614.131 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.UnpackSplitAtSurface = 0 bool
2018-09-22T21:43:34.132Z,1537652614.132 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-22T21:43:34.143Z,1537652614.143 [MissionManager](INFO): RedefineArg trackPatch:SurfaceComms:SurfaceComms.SurfacePitch = value:20.000000 arcdeg
2018-09-22T21:43:34.145Z,1537652614.145 [MissionManager](INFO): RedefineArg trackPatch:SurfaceComms:SurfaceComms.SurfaceSpeed = value:1.000000 m/s
2018-09-22T21:43:34.151Z,1537652614.151 [trackPatch:F.OffshoreEnvelope](DEBUG): Construct OffshoreEnvelope.
2018-09-22T21:43:34.180Z,1537652614.180 [trackPatch:G.WaterDepthEnvelope](DEBUG): Construct WaterDepthEnvelope.
2018-09-22T21:43:34.184Z,1537652614.184 [trackPatch:H.Pitch](DEBUG): Construct.
2018-09-22T21:43:34.188Z,1537652614.188 [trackPatch:I.Buoyancy](DEBUG): Construct Buoyancy.
2018-09-22T21:43:34.205Z,1537652614.205 [MissionManager](INFO): Inserting Stack: Missions/Insert/Science.xml
2018-09-22T21:43:34.351Z,1537652614.351 [MissionManager](INFO): DefineArg trackPatch:Science.SampleISUS = 0 bool
2018-09-22T21:43:34.354Z,1537652614.354 [MissionManager](INFO): DefineArg trackPatch:Science.SampleISUSmaxPitch = 60.000000 arcdeg
2018-09-22T21:43:34.356Z,1537652614.356 [MissionManager](INFO): DefineArg trackPatch:Science.SampleISUSminPitch = -60.000000 arcdeg
2018-09-22T21:43:34.358Z,1537652614.358 [MissionManager](INFO): DefineArg trackPatch:Science.PeakDetectChlActive = 0 bool
2018-09-22T21:43:34.360Z,1537652614.360 [MissionManager](INFO): DefineArg trackPatch:Science.HighestChlPeakReportActive = 0 bool
2018-09-22T21:43:34.362Z,1537652614.362 [MissionManager](INFO): DefineArg trackPatch:Science.PatchTracking = 1 bool
2018-09-22T21:43:34.364Z,1537652614.364 [MissionManager](INFO): DefineArg trackPatch:Science.FilterWidthHorizontal = 3.000000 count
2018-09-22T21:43:34.366Z,1537652614.366 [MissionManager](INFO): DefineArg trackPatch:Science.NumProfilesSlidingwindow = 100.000000 count
2018-09-22T21:43:34.368Z,1537652614.368 [MissionManager](INFO): DefineArg trackPatch:Science.OffPeakFractionHorizontal = 80.000000 %
2018-09-22T21:43:34.370Z,1537652614.370 [MissionManager](INFO): DefineArg trackPatch:Science.PeakDetectNO3Active = 0 bool
2018-09-22T21:43:34.372Z,1537652614.372 [MissionManager](INFO): DefineArg trackPatch:Science.PeakDetectOilActive = 0 bool
2018-09-22T21:43:34.408Z,1537652614.408 [MissionManager](INFO): DefineArg trackPatch:Science.UpwardDerivativeOfTemperatureActive = 0 bool
2018-09-22T21:43:34.411Z,1537652614.411 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledAanderaaO2 = 0.000000 bool
2018-09-22T21:43:34.413Z,1537652614.413 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledNeilBrown = 0.000000 bool
2018-09-22T21:43:34.416Z,1537652614.416 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledSeabird = 0.000000 bool
2018-09-22T21:43:34.437Z,1537652614.437 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledTurbulence_NPS = 0.000000 bool
2018-09-22T21:43:34.440Z,1537652614.440 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledWetLabsBB2FL = 0.000000 bool
2018-09-22T21:43:34.442Z,1537652614.442 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledWetLabsSeaOWL_UV_A = 1.000000 bool
2018-09-22T21:43:34.462Z,1537652614.462 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledISUS = 0.000000 bool
2018-09-22T21:43:34.464Z,1537652614.464 [MissionManager](INFO): DefineArg trackPatch:Science.LowPassWindowLength = 20.000000 count
2018-09-22T21:43:34.466Z,1537652614.466 [MissionManager](INFO): DefineArg trackPatch:Science.PeakChlShallowBound = 10.000000 m
2018-09-22T21:43:34.468Z,1537652614.468 [MissionManager](INFO): DefineArg trackPatch:Science.PeakChlDeepBound = 20.000000 m
2018-09-22T21:43:34.471Z,1537652614.471 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChl = 0.000000 ug/l
2018-09-22T21:43:34.489Z,1537652614.489 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlDepth = 0.000000 m
2018-09-22T21:43:34.491Z,1537652614.491 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlTemperature = 0.000000 degC
2018-09-22T21:43:34.494Z,1537652614.494 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlLatitude = nan arcdeg
2018-09-22T21:43:34.496Z,1537652614.496 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlLongitude = nan arcdeg
2018-09-22T21:43:34.508Z,1537652614.508 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3 = 0.000000 umol/l
2018-09-22T21:43:34.510Z,1537652614.510 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3Depth = 0.000000 m
2018-09-22T21:43:34.513Z,1537652614.513 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3Latitude = nan arcdeg
2018-09-22T21:43:34.515Z,1537652614.515 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3Longitude = nan arcdeg
2018-09-22T21:43:34.532Z,1537652614.532 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChl = 0.000000 m
2018-09-22T21:43:34.535Z,1537652614.535 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlDepth = 0.000000 m
2018-09-22T21:43:34.537Z,1537652614.537 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlLatitude = nan arcdeg
2018-09-22T21:43:34.539Z,1537652614.539 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlLongitude = nan arcdeg
2018-09-22T21:43:34.557Z,1537652614.557 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlDistance = nan m
2018-09-22T21:43:34.560Z,1537652614.560 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOil = 0.000000 kg/m3
2018-09-22T21:43:34.562Z,1537652614.562 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOilDepth = 0.000000 m
2018-09-22T21:43:34.564Z,1537652614.564 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOilLatitude = nan arcdeg
2018-09-22T21:43:34.576Z,1537652614.576 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOilLongitude = nan arcdeg
2018-09-22T21:43:34.606Z,1537652614.606 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-22T21:43:34.632Z,1537652614.632 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-22T21:43:34.653Z,1537652614.653 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-22T21:43:34.680Z,1537652614.680 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-22T21:43:34.706Z,1537652614.706 [MissionManager](INFO): RedefineArg trackPatch:Science.PeakDetectChlActive = value:1 bool
2018-09-22T21:43:34.737Z,1537652614.737 [MissionManager](INFO): RedefineArg trackPatch:Science.PatchTracking = value:1 bool
2018-09-22T21:43:34.739Z,1537652614.739 [MissionManager](INFO): RedefineArg trackPatch:Science.LowPassWindowLength = reader:trackPatch.LowPassWindowLen
2018-09-22T21:43:34.740Z,1537652614.740 [MissionManager](INFO): RedefineArg trackPatch:Science.PeakChlShallowBound = reader:trackPatch.PeakChlShallowBnd
2018-09-22T21:43:34.742Z,1537652614.742 [MissionManager](INFO): RedefineArg trackPatch:Science.PeakChlDeepBound = reader:trackPatch.PeakChlDeepBnd
2018-09-22T21:43:34.743Z,1537652614.743 [MissionManager](INFO): RedefineArg trackPatch:Science.OffPeakFractionHorizontal = reader:trackPatch.OffPeakFraction
2018-09-22T21:43:34.744Z,1537652614.744 [trackPatch:K.SetSpeed](DEBUG): Construct.
2018-09-22T21:43:34.746Z,1537652614.746 [trackPatch:L.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-22T21:43:34.764Z,1537652614.764 [trackPatch:M.YoYo](DEBUG): Construct YoYo.
2018-09-22T21:43:34.792Z,1537652614.792 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-22T21:43:34.817Z,1537652614.817 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-22T21:43:34.835Z,1537652614.835 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-22T21:43:34.853Z,1537652614.853 [trackPatch:PatchDetectHorizontal:InLegWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-22T21:43:34.868Z,1537652614.868 [trackPatch:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-22T21:43:34.945Z,1537652614.945 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Trigger="Tethys/Trigger" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Trigger http://okeanids.mbari.org/tethys/Xml/Trigger.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="trackPatch">

    <Description>
        Vehicle runs yo-yos, with patch detect enabled for cholorphyll
        concentration.
    </Description>

<!-- Vehicle safety parameters -->

    <DefineArg Name="MinAltitude"><Description>
        Minimum altitude for the entire mission.
    </Description><Units:meter/><Value>5</Value></DefineArg>

    <DefineArg Name="MaxDepth"><Description>
        Maximum depth for the entire mission.
    </Description><Units:meter/><Value>65</Value></DefineArg>

    <DefineArg Name="MinWaterDepth"><Description>
        Minimum water depth for the entire mission.
    </Description><Units:meter/><Value>10</Value></DefineArg>

    <DefineArg Name="MinOffshore"><Description>
        Minimum offshore distance for the entire mission.
    </Description><Units:meter/><Value>2000</Value></DefineArg>

    <DefineArg Name="NeedCommsTime"><Description>
        Maximum time between surfacings for communications
    </Description><Units:minute/><Value>180</Value></DefineArg>

    <DefineArg Name="MissionTimeout"><Description>
        Timeout for the entire mission
    </Description><Units:hour/><Value>56</Value></DefineArg>

    <DefineArg Name="MassDefault"><Description>
        Static setting for mass during the mission. Defaults to massDefault
        setting in the Config/Control.cfg file.
    </Description><Control:VerticalControl.massDefault/></DefineArg>

    <DefineArg Name="BuoyancyNeutral"><Description>
        Buoyancy bladder position while performing the YoYo behavior. Defaults
        to buoyancyNeutral setting in the Config/Control.cfg file.
    </Description><Control:VerticalControl.buoyancyNeutral/></DefineArg>

<!-- Basic guidance settings -->

    <DefineArg Name="YoYoMinDepth"><Description>
        Minimum depth during yo-yo's.
    </Description><Units:meter/><Value>3.0</Value></DefineArg>

    <DefineArg Name="YoYoMaxDepth"><Description>
        Maximum depth during yo-yo's.
    </Description><Units:meter/><Value>30.0</Value></DefineArg>

    <DefineArg Name="YoYoUpPitch"><Description>
        Pitch when yo-yo's are ascending.
    </Description><Units:degree/><Value>20.0</Value></DefineArg>

    <DefineArg Name="YoYoDownPitch"><Description>
        Pitch when yo-yo's are descending.
    </Description><Units:degree/><Value>-20.0</Value></DefineArg>

    <DefineArg Name="Speed"><Description>
        Vehicle speed.
    </Description><Units:meter_per_second/><Value>1</Value></DefineArg>

    <DefineArg Name="WpMaxDistance"><Description>
        Maximum length of each tracking leg
<!--debug
    </Description><Units:meter/><Value>7500</Value></DefineArg>
-->
    </Description><Units:meter/><Value>1000</Value></DefineArg>

    <DefineArg Name="WpTimeout"><Description>
        Maximum duration of each tracking leg
    </Description><Units:second/><Value>8000</Value></DefineArg>

    <DefineArg Name="WaterFrame"><Description>
        Set WaterFrame true to drive towards waypoints in the water frame of
        reference
    </Description><True/></DefineArg>

    <DefineArg Name="Repeat"><Description>
        Maximum number of tracking legs
    </Description><Units:count/><Value>20</Value></DefineArg>

<!-- Constant settings for each tracking leg -->

    <DefineArg Name="Turn"><Description>
        Amount to turn at each leg
    </Description><Units:degree/><Value>90</Value></DefineArg>

    <DefineArg Name="Reverse"><Description>
        Change in bearing which reverses vehicle direction
    </Description><Units:degree/><Value>180</Value></DefineArg>

    <DefineArg Name="TwoPi"><Description>
        Applied to stop run-up of angles
    </Description><Units:degree/><Value>360</Value></DefineArg>

    <DefineArg Name="LowPassWindowLen"><Description>
        Low-pass window length (based on depth sensor sampling interval 0.4
        second) for low-pass filtering.
    </Description><Units:count/><Value>20</Value></DefineArg>

    <DefineArg Name="PeakChlShallowBnd"><Description>
        Shallow depth bound for detecting chl peak on each descent or ascent
        profile.
<!--debug
    </Description><Units:meter/><Value>NaN</Value></DefineArg>
-->
    </Description><Units:meter/><Value>10</Value></DefineArg>

    <DefineArg Name="PeakChlDeepBnd"><Description>
        Deep depth bound for detecting chl peak on each descent or ascent
        profile.
<!--debug
    </Description><Units:meter/><Value>NaN</Value></DefineArg>
-->
    </Description><Units:meter/><Value>20</Value></DefineArg>

    <DefineArg Name="FilterWidth"><Description>
        Width of boxcar filter used in horizontal patch detection
    </Description><Units:count/><Value>4</Value></DefineArg>

    <DefineArg Name="BeginThreshold"><Description>
        If non-NaN, sets threshold for starting horizontal patch detection
    </Description><Units:microgram_per_liter/><Value>NaN</Value></DefineArg>

    <DefineArg Name="OffPeakFraction"><Description>
        When filtered horizontal value is this fraction of the peak, consider it
        outside the patch.
    </Description><Units:percent/><Value>80</Value></DefineArg>

    <DefineArg Name="PatchMode"><Description>
        If true, use center of "in peak" range as the turn-around point. If
        false use maximum horizontal peak location as the turn-around point.
    </Description><False/></DefineArg>

<!-- Variable Settings for each tracking leg -->

    <DefineArg Name="WpBearing"><Description>
        Bearing being followed in the current leg. Set this to initialize start
        direction of patch tracking.
    </Description><Units:degree/><Value>-90</Value></DefineArg>

    <DefineOutput Name="PatchDetectOn"><Description>
        Mission sets this to true when the patch has been crossed.
    </Description><False/></DefineOutput>

    <DefineOutput Name="WpDone"><Description>
        Mission sets this to true when the cross-patch waypoint has been
        reached.
    </Description><False/></DefineOutput>

    <DefineOutput Name="PatchChl"><Units:microgram_per_liter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlDepth"><Units:meter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlDistance"><Units:meter/><Value>0</Value></DefineOutput>

<!-- The timeout -->

    <Timeout Duration="MissionTimeout"/>

<!-- And now the mission -->

    <Guidance:AltitudeEnvelope>
        <Parallel/>
        <Setting><Guidance:AltitudeEnvelope.minAltitude/><Arg Name="MinAltitude"/></Setting>
    </Guidance:AltitudeEnvelope>

    <Guidance:DepthEnvelope>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="MaxDepth"/></Setting>
    </Guidance:DepthEnvelope>

    <Insert Filename="Insert/Surface.xml" Id="SurfaceCommsSplit">
        <RedefineArg Name="SurfacePitch"><Units:degree/><Value>20</Value></RedefineArg>
        <RedefineArg Name="SurfaceSpeed"><Units:meter_per_second/><Value>1</Value></RedefineArg>
        <RedefineArg Name="UnpackSplitAtSurface"><True/></RedefineArg>
    </Insert>

    <Aggregate Id="SurfaceComms">

        <When>
            <Called/>
        </When>

        <Insert Filename="Insert/Surface.xml">
            <RedefineArg Name="SurfacePitch"><Units:degree/><Value>20</Value></RedefineArg>
            <RedefineArg Name="SurfaceSpeed"><Units:meter_per_second/><Value>1</Value></RedefineArg>
        </Insert>

    </Aggregate>

<!-- GPS Update.  Don't go too long w/o a GPS fix. -->

    <Aggregate Id="NeedComms">

        <When>
            <Universal:platform_pitch_angle/>
            <Gt><Units:degree/><Value>0</Value></Gt>
            <And><Elapsed><Universal:time_fix/></Elapsed><Gt><Arg Name="NeedCommsTime"/></Gt></And>
            <Or><Elapsed><Universal:time_fix/></Elapsed><Gt><Arg Name="NeedCommsTime"/><Add><Units:minute/><Value>10</Value></Add></Gt></Or>
        </When>

        <Syslog Severity="Important">NeedComms Timeout Surfacing</Syslog>

        <Call RefId="SurfaceComms"/>

    </Aggregate>

    <Guidance:OffshoreEnvelope>
        <Parallel/>
        <Setting><Guidance:OffshoreEnvelope.minOffshore/><Arg Name="MinOffshore"/></Setting>
    </Guidance:OffshoreEnvelope>

    <Guidance:WaterDepthEnvelope>
        <Parallel/>
        <Setting><Guidance:WaterDepthEnvelope.minWaterDepth/><Arg Name="MinWaterDepth"/></Setting>
    </Guidance:WaterDepthEnvelope>

    <Guidance:Pitch>
        <Parallel/>
        <Setting><Guidance:Pitch.massPosition/><Arg Name="MassDefault"/></Setting>
    </Guidance:Pitch>

    <Guidance:Buoyancy>
        <Parallel/>
        <Setting><Guidance:Buoyancy.position /><Arg Name="BuoyancyNeutral"/></Setting>
    </Guidance:Buoyancy>

<!-- If we're executing here or below, lets' get science data! -->

    <Insert Filename="Insert/Science.xml">
        <RedefineArg Name="PeakDetectChlActive"><True/></RedefineArg>
        <RedefineArg Name="PatchTracking"><True/></RedefineArg>
        <RedefineArg Name="LowPassWindowLength"><Arg Name="LowPassWindowLen"/></RedefineArg>
        <RedefineArg Name="PeakChlShallowBound"><Arg Name="PeakChlShallowBnd"/></RedefineArg>
        <RedefineArg Name="PeakChlDeepBound"><Arg Name="PeakChlDeepBnd"/></RedefineArg>
        <RedefineArg Name="OffPeakFractionHorizontal"><Arg Name="OffPeakFraction"/></RedefineArg>
    </Insert>

    <Guidance:SetSpeed>
        <Parallel/>
        <Setting><Guidance:SetSpeed.speed/><Arg Name="Speed"/></Setting>
    </Guidance:SetSpeed>

    <Guidance:DepthEnvelope>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.minDepth/><Arg Name="YoYoMinDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="YoYoMaxDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:DepthEnvelope.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:DepthEnvelope>

    <Guidance:YoYo>
        <Parallel/>
        <Setting><Guidance:YoYo.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:YoYo.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:YoYo>

    <Aggregate Id="PatchDetectHorizontal">

        <Sequence Repeat="Repeat"/>

        <Aggregate Id="PatchDetection">

            <When>
                <Arg Name="PatchDetectOn"/>
            </When>

            <Trigger:PeakDetectHorizontal Id="PeakDetectHorizontalTrigger">
                <Sequence/>
                <Break><Arg Name="WpDone"/>
                </Break>
                <Setting><Trigger:PeakDetectHorizontal.patchTracking/><Units:bool/><Value>1</Value></Setting>
                <Setting><Trigger:PeakDetectHorizontal.detectFrom/><Arg Name="Science:PeakChl"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.depthFrom/><Arg Name="Science:PeakChlDepth"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.latitudeFrom/><Arg Name="Science:PeakChlLatitude"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.longitudeFrom/><Arg Name="Science:PeakChlLongitude"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.beginThreshold/><Arg Name="BeginThreshold"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.offPeakFraction/><Arg Name="OffPeakFraction"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.filterWidth/><Arg Name="FilterWidth"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.centerPeak/><Arg Name="PatchMode"/></Setting>
                <OutputArg Name="PatchChl"><Trigger:PeakDetectHorizontal.peakDetect/></OutputArg>
                <OutputArg Name="PatchChlDepth"><Trigger:PeakDetectHorizontal.peakDepth/></OutputArg>
                <OutputArg Name="PatchChlLatitude"><Trigger:PeakDetectHorizontal.peakLatitude/></OutputArg>
                <OutputArg Name="PatchChlLongitude"><Trigger:PeakDetectHorizontal.peakLongitude/></OutputArg>
                <OutputArg Name="PatchChlDistance"><Trigger:PeakDetectHorizontal.peakDistance/></OutputArg>
            </Trigger:PeakDetectHorizontal>

            <Syslog Severity="Important">Fell below OffPeakFraction. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Universal:depth/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog>

            <SendData Service="Express"><Arg Name="PatchChl"/><Arg Name="PatchChlDepth"/><Arg Name="PatchChlLatitude"/><Arg Name="PatchChlLongitude"/>
            </SendData>

            <Assign Id="AssignPatchDetectOff"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

        </Aggregate>

        <Assign Id="AssignPatchDetectOn"><Sequence/><Arg Name="PatchDetectOn"/><True/></Assign>

        <Syslog Severity="Important">Next: bearing for CrossLeg: <Arg Name="WpBearing"/><Units:degree/>. WpMaxDistance = <Arg Name="WpMaxDistance"/><Units:meter/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>.</Syslog>

        <Aggregate Id="CrossLeg">

            <Description>
                This is a long leg across the width of the patch. Also the first
                leg in a mission run. Two waypoints run in parallel: a short run
                to the surfacing point, and a longer run to the edge of the
                patch.
            </Description>

            <Sequence/>

            <Break><Arg Name="WpDone"/>
                <Or><Arg Name="PatchDetectOn"/><Eq><False/></Eq></Or>
            </Break>

            <Guidance:Waypoint Id="CrossSurfaceWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="PatchChlDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Call RefId="SurfaceComms"/>

            <Guidance:Waypoint Id="CrossPeakWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="WpMaxDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

<!--debug-->
            <Syslog Severity="Important">CrossPeakWp done. Lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Universal:depth/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog> 

            <Assign Id="AssignPatchDetectOffInCrossLeg"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

            <Assign Id="AssignWpDoneInCrossLeg"><Sequence/><Arg Name="WpDone"/><True/></Assign>

        </Aggregate>

        <Assign Id="AssignWpBearingForInLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Add><Arg Name="Reverse"/></Add><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

        <Syslog Severity="Important">Next: bearing for InLeg: <Arg Name="WpBearing"/><Units:degree/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Universal:depth/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog> 

        <Guidance:Waypoint Id="InLegWp">
            <Description>
                Simply drive back towards the patch center
            </Description>
            <Sequence/>
            <Timeout Duration="WpTimeout"/>
            <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="PatchChlDistance"/></Setting>
            <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
            <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
        </Guidance:Waypoint>

        <Assign Id="AssignWpBearingForOutLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Sub><Arg Name="Turn"/></Sub><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

        <Syslog Severity="Important">Next: bearing for OutLeg: <Arg Name="WpBearing"/><Units:degree/>. WpMaxDistance = <Arg Name="WpMaxDistance"/><Units:meter/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Universal:depth/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog>

        <Call RefId="SurfaceCommsSplit"/>

        <Assign Id="AssignPatchDetectOnForOutLeg"><Sequence/><Arg Name="PatchDetectOn"/><True/></Assign>

        <Aggregate Id="OutLeg">

            <Description>
                Drive outward until edge of patch is detected.
            </Description>

            <Sequence/>

            <Break><Arg Name="WpDone"/>
                <Or><Arg Name="PatchDetectOn"/><Eq><False/></Eq></Or>
            </Break>

            <Guidance:Waypoint Id="OutLegWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="WpMaxDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Assign Id="AssignPatchDetectOffInOutLeg"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

            <Assign Id="AssignWpDoneInOutLeg"><Sequence/><Arg Name="WpDone"/><True/></Assign>

        </Aggregate>

        <Assign Id="AssignWpBearingForCrossLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Add><Arg Name="Reverse"/></Add><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

    </Aggregate>

</Mission>


2018-09-22T21:43:34.946Z,1537652614.946 [CommandLine](IMPORTANT): Loaded ./Missions/Science/trackPatch.xml
2018-09-22T21:43:46.802Z,1537652626.802 [CommandLine](IMPORTANT): got command set trackPatch.MissionTimeout 30.000000 minute
2018-09-22T21:43:46.803Z,1537652626.803 [CommandLine](IMPORTANT): got command set trackPatch.YoYoMinDepth 2.000000 meter
2018-09-22T21:43:46.804Z,1537652626.804 [CommandLine](IMPORTANT): got command set trackPatch.YoYoMaxDepth 10.000000 meter
2018-09-22T21:43:46.804Z,1537652626.804 [CommandLine](IMPORTANT): got command set trackPatch.PeakChlShallowBnd 3.000000 meter
2018-09-22T21:43:46.805Z,1537652626.805 [CommandLine](IMPORTANT): got command set trackPatch.PeakChlDeepBnd 8.000000 meter
2018-09-22T21:43:46.806Z,1537652626.806 [CommandLine](IMPORTANT): got command run
2018-09-22T21:43:46.808Z,1537652626.808 [CommandLine](IMPORTANT): Running 
2018-09-22T21:43:46.858Z,1537652626.858 [RDI_Pathfinder](ERROR): No DVL communication! Re-initializing
2018-09-22T21:43:46.858Z,1537652626.858 [RDI_Pathfinder] Communications Fault, FailCount= 1
2018-09-22T21:43:46.858Z,1537652626.858 [RDI_Pathfinder](ERROR): Communications Fault
2018-09-22T21:43:46.880Z,1537652626.880 [Default] Stopped
2018-09-22T21:43:46.881Z,1537652626.881 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-22T21:43:46.889Z,1537652626.889 [Default:B.GoToSurface] Stopped
2018-09-22T21:43:46.889Z,1537652626.889 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-22T21:43:46.889Z,1537652626.889 [Default:CheckIn] Stopped
2018-09-22T21:43:46.889Z,1537652626.889 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-22T21:43:46.889Z,1537652626.889 [Default:CheckIn:Read_GPS] Stopped
2018-09-22T21:43:46.890Z,1537652626.890 [MissionManager](IMPORTANT): Started mission trackPatch
2018-09-22T21:43:46.890Z,1537652626.890 [trackPatch] Running Loop=1
2018-09-22T21:43:46.890Z,1537652626.890 [trackPatch](DEBUG): Aggregate::initialize trackPatch
2018-09-22T21:43:46.890Z,1537652626.890 [trackPatch:A.AltitudeEnvelope] Running Loop=1
2018-09-22T21:43:46.890Z,1537652626.890 [trackPatch:A.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-22T21:43:46.890Z,1537652626.890 [trackPatch:B.DepthEnvelope] Running Loop=1
2018-09-22T21:43:46.890Z,1537652626.890 [trackPatch:B.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-22T21:43:46.891Z,1537652626.891 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-22T21:43:46.891Z,1537652626.891 [trackPatch:F.OffshoreEnvelope](DEBUG): Initialize OffshoreEnvelopeComponent.
2018-09-22T21:43:46.891Z,1537652626.891 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-22T21:43:46.891Z,1537652626.891 [trackPatch:G.WaterDepthEnvelope](DEBUG): Initialize WaterDepthEnvelopeComponent.
2018-09-22T21:43:46.891Z,1537652626.891 [trackPatch:H.Pitch] Running Loop=1
2018-09-22T21:43:46.891Z,1537652626.891 [trackPatch:H.Pitch](DEBUG): Initialize.
2018-09-22T21:43:46.891Z,1537652626.891 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-22T21:43:46.891Z,1537652626.891 [trackPatch:I.Buoyancy](DEBUG): Initialize Buoyancy Component.
2018-09-22T21:43:46.891Z,1537652626.891 [trackPatch:Science] Running Loop=1
2018-09-22T21:43:46.892Z,1537652626.892 [trackPatch:Science](DEBUG): Aggregate::initialize trackPatch:Science
2018-09-22T21:43:46.892Z,1537652626.892 [trackPatch:Science:A] Running Loop=1
2018-09-22T21:43:46.892Z,1537652626.892 [trackPatch:Science:B] Running Loop=1
2018-09-22T21:43:46.892Z,1537652626.892 [trackPatch:Science:C] Running Loop=1
2018-09-22T21:43:46.892Z,1537652626.892 [trackPatch:Science:D] Running Loop=1
2018-09-22T21:43:46.892Z,1537652626.892 [trackPatch:Science:E] Running Loop=1
2018-09-22T21:43:46.892Z,1537652626.892 [trackPatch:Science:F] Running Loop=1
2018-09-22T21:43:46.892Z,1537652626.892 [trackPatch:Science:G] Running Loop=1
2018-09-22T21:43:46.892Z,1537652626.892 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-22T21:43:46.892Z,1537652626.892 [trackPatch:Science:PeakDetectChl] Running Loop=1
2018-09-22T21:43:46.892Z,1537652626.892 [trackPatch:Science:PeakDetectChl](DEBUG): Aggregate::initialize trackPatch:Science:PeakDetectChl
2018-09-22T21:43:46.897Z,1537652626.897 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2018-09-22T21:43:46.897Z,1537652626.897 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-22T21:43:46.898Z,1537652626.898 [trackPatch:Science:HighestChlPeakReport] Running Loop=1
2018-09-22T21:43:46.898Z,1537652626.898 [trackPatch:Science:HighestChlPeakReport](DEBUG): Aggregate::initialize trackPatch:Science:HighestChlPeakReport
2018-09-22T21:43:46.899Z,1537652626.899 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2018-09-22T21:43:46.899Z,1537652626.899 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2018-09-22T21:43:46.899Z,1537652626.899 [trackPatch:Science:PeakDetectNO3] Running Loop=1
2018-09-22T21:43:46.899Z,1537652626.899 [trackPatch:Science:PeakDetectNO3](DEBUG): Aggregate::initialize trackPatch:Science:PeakDetectNO3
2018-09-22T21:43:46.899Z,1537652626.899 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2018-09-22T21:43:46.899Z,1537652626.899 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-22T21:43:46.900Z,1537652626.900 [trackPatch:Science:PeakDetectOil] Running Loop=1
2018-09-22T21:43:46.901Z,1537652626.901 [trackPatch:Science:PeakDetectOil](DEBUG): Aggregate::initialize trackPatch:Science:PeakDetectOil
2018-09-22T21:43:46.906Z,1537652626.906 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2018-09-22T21:43:46.906Z,1537652626.906 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-22T21:43:46.907Z,1537652626.907 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-22T21:43:46.907Z,1537652626.907 [trackPatch:K.SetSpeed](DEBUG): Initialize.
2018-09-22T21:43:46.907Z,1537652626.907 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-22T21:43:46.907Z,1537652626.907 [trackPatch:L.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-22T21:43:46.908Z,1537652626.908 [trackPatch:M.YoYo] Running Loop=1
2018-09-22T21:43:46.908Z,1537652626.908 [trackPatch:M.YoYo](DEBUG): Initialize YoYoComponent.
2018-09-22T21:43:46.908Z,1537652626.908 [trackPatch:SurfaceCommsSplit] Running Loop=1
2018-09-22T21:43:46.908Z,1537652626.908 [trackPatch:SurfaceCommsSplit](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit
2018-09-22T21:43:46.908Z,1537652626.908 [trackPatch:SurfaceCommsSplit:A.GoToSurface] Running Loop=1
2018-09-22T21:43:46.908Z,1537652626.908 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-22T21:43:46.913Z,1537652626.913 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-22T21:43:46.913Z,1537652626.913 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-22T21:43:46.914Z,1537652626.914 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-22T21:43:46.914Z,1537652626.914 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-22T21:43:46.915Z,1537652626.915 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-22T21:43:46.915Z,1537652626.915 [trackPatch:M.YoYo] Running Loop=1
2018-09-22T21:43:46.921Z,1537652626.921 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-22T21:43:46.923Z,1537652626.923 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-22T21:43:46.924Z,1537652626.924 [trackPatch:Science] Running Loop=1
2018-09-22T21:43:46.939Z,1537652626.939 [trackPatch:Science:PeakDetectOil] Stopped
2018-09-22T21:43:46.939Z,1537652626.939 [trackPatch:Science:PeakDetectOil](DEBUG): Aggregate::uninitialize trackPatch:Science:PeakDetectOil
2018-09-22T21:43:46.939Z,1537652626.939 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2018-09-22T21:43:46.939Z,1537652626.939 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-22T21:43:46.940Z,1537652626.940 [trackPatch:Science:PeakDetectNO3] Stopped
2018-09-22T21:43:46.940Z,1537652626.940 [trackPatch:Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize trackPatch:Science:PeakDetectNO3
2018-09-22T21:43:46.940Z,1537652626.940 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2018-09-22T21:43:46.940Z,1537652626.940 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-22T21:43:46.940Z,1537652626.940 [trackPatch:Science:HighestChlPeakReport] Stopped
2018-09-22T21:43:46.940Z,1537652626.940 [trackPatch:Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize trackPatch:Science:HighestChlPeakReport
2018-09-22T21:43:46.940Z,1537652626.940 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2018-09-22T21:43:46.940Z,1537652626.940 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-22T21:43:46.940Z,1537652626.940 [trackPatch:Science:PeakDetectChl] Running Loop=1
2018-09-22T21:43:46.946Z,1537652626.946 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-22T21:43:46.946Z,1537652626.946 [trackPatch:Science:Read_Oil](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-22T21:43:46.947Z,1537652626.947 [trackPatch:Science:G] Running Loop=1
2018-09-22T21:43:46.947Z,1537652626.947 [trackPatch:Science:G](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-22T21:43:46.948Z,1537652626.948 [trackPatch:Science:F] Stopped
2018-09-22T21:43:46.948Z,1537652626.948 [trackPatch:Science:E] Stopped
2018-09-22T21:43:46.948Z,1537652626.948 [trackPatch:Science:D] Stopped
2018-09-22T21:43:46.949Z,1537652626.949 [trackPatch:Science:C] Stopped
2018-09-22T21:43:46.953Z,1537652626.953 [trackPatch:Science:B] Stopped
2018-09-22T21:43:46.953Z,1537652626.953 [trackPatch:Science:A] Stopped
2018-09-22T21:43:46.953Z,1537652626.953 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-22T21:43:46.954Z,1537652626.954 [trackPatch:H.Pitch] Running Loop=1
2018-09-22T21:43:46.955Z,1537652626.955 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-22T21:43:46.956Z,1537652626.956 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-22T21:43:46.970Z,1537652626.970 [trackPatch:SurfaceCommsSplit:B] Running Loop=1
2018-09-22T21:43:46.970Z,1537652626.970 [trackPatch:SurfaceCommsSplit:B](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit:B
2018-09-22T21:43:46.971Z,1537652626.971 [trackPatch:SurfaceCommsSplit:B:A] Running Loop=1
2018-09-22T21:43:46.971Z,1537652626.971 [trackPatch:B.DepthEnvelope] Running Loop=1
2018-09-22T21:43:46.972Z,1537652626.972 [trackPatch:A.AltitudeEnvelope] Running Loop=1
2018-09-22T21:43:46.996Z,1537652626.996 [CBIT](ERROR): Communications Fault in component: RDI_Pathfinder
2018-09-22T21:43:47.149Z,1537652627.149 [RDI_Pathfinder](INFO): Powering down
2018-09-22T21:43:47.184Z,1537652627.184 [trackPatch:SurfaceCommsSplit:B:A](INFO): ##UnpackSplit##
2018-09-22T21:43:47.186Z,1537652627.186 [trackPatch:SurfaceCommsSplit:B:A] Stopped
2018-09-22T21:43:47.186Z,1537652627.186 [trackPatch:SurfaceCommsSplit:B](INFO): Completed trackPatch:SurfaceCommsSplit:B
2018-09-22T21:43:47.186Z,1537652627.186 [trackPatch:SurfaceCommsSplit:B] Stopped
2018-09-22T21:43:47.186Z,1537652627.186 [trackPatch:SurfaceCommsSplit:B](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit:B
2018-09-22T21:43:47.186Z,1537652627.186 [trackPatch:SurfaceCommsSplit:C] Running Loop=1
2018-09-22T21:43:47.187Z,1537652627.187 [trackPatch:SurfaceCommsSplit:C](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit:C
2018-09-22T21:43:47.187Z,1537652627.187 [trackPatch:SurfaceCommsSplit:C:A] Running Loop=1
2018-09-22T21:43:47.229Z,1537652627.229 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-22T21:43:47.230Z,1537652627.230 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-22T21:43:47.476Z,1537652627.476 [trackPatch:M.YoYo] Preempted
2018-09-22T21:43:47.476Z,1537652627.476 [trackPatch:L.DepthEnvelope] Preempted
2018-09-22T21:43:47.476Z,1537652627.476 [trackPatch:K.SetSpeed] Preempted
2018-09-22T21:43:47.476Z,1537652627.476 [trackPatch:Science] Preempted
2018-09-22T21:43:47.476Z,1537652627.476 [trackPatch:Science:G] Preempted
2018-09-22T21:43:47.476Z,1537652627.476 [trackPatch:Science:Read_Oil] Preempted
2018-09-22T21:43:47.476Z,1537652627.476 [trackPatch:Science:PeakDetectChl] Preempted
2018-09-22T21:43:47.476Z,1537652627.476 [trackPatch:I.Buoyancy] Preempted
2018-09-22T21:43:47.476Z,1537652627.476 [trackPatch:H.Pitch] Preempted
2018-09-22T21:43:47.476Z,1537652627.476 [trackPatch:G.WaterDepthEnvelope] Preempted
2018-09-22T21:43:47.477Z,1537652627.477 [trackPatch:F.OffshoreEnvelope] Preempted
2018-09-22T21:43:47.487Z,1537652627.487 [trackPatch:SurfaceCommsSplit:C:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-22T21:43:47.914Z,1537652627.914 [CBIT](INFO): Clearing failed state for component RDI_Pathfinder
2018-09-22T21:43:47.914Z,1537652627.914 [RDI_Pathfinder] No Fault, FailCount= 1
2018-09-22T21:43:49.401Z,1537652629.401 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-22T21:44:01.467Z,1537652641.467 [RDI_Pathfinder](ERROR): Failed to parse:Pathfinder
2018-09-22T21:46:57.587Z,1537652817.587 [RDI_Pathfinder](ERROR): only read 2 of 5 data items
2018-09-22T21:46:57.587Z,1537652817.587 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-328,-32768,V
2018-09-22T21:47:35.460Z,1537652855.460 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-32768,V
2018-09-22T21:48:37.592Z,1537652917.592 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-22T21:48:37.592Z,1537652917.592 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-3268,-32768,V
2018-09-22T21:51:40.062Z,1537653100.062 [NAL9602](FAULT): GPS failed to acquire within timeout.
2018-09-22T21:51:40.062Z,1537653100.062 [NAL9602] Data Fault, FailCount= 1
2018-09-22T21:51:40.063Z,1537653100.063 [NAL9602](ERROR): Data Fault
2018-09-22T21:51:40.146Z,1537653100.146 [CBIT](ERROR): Data Fault in component: NAL9602
2018-09-22T21:51:40.464Z,1537653100.464 [NAL9602](INFO): Powering down
2018-09-22T21:51:41.325Z,1537653101.325 [CBIT](INFO): Clearing failed state for component NAL9602
2018-09-22T21:51:41.326Z,1537653101.326 [NAL9602] No Fault, FailCount= 1
2018-09-22T21:52:10.489Z,1537653130.489 [NAL9602](INFO): Powering up NAL9602
2018-09-22T21:52:21.658Z,1537653141.658 [NAL9602](INFO): NAL9602 initialized
2018-09-22T22:02:24.259Z,1537653744.259 [NAL9602](FAULT): GPS failed to acquire within timeout.
2018-09-22T22:02:24.259Z,1537653744.259 [NAL9602] Data Fault, FailCount= 2
2018-09-22T22:02:24.259Z,1537653744.259 [NAL9602](ERROR): Data Fault
2018-09-22T22:02:24.393Z,1537653744.393 [CBIT](ERROR): Data Fault in component: NAL9602
2018-09-22T22:02:24.622Z,1537653744.622 [NAL9602](INFO): Powering down
2018-09-22T22:02:25.513Z,1537653745.513 [CBIT](INFO): Clearing failed state for component NAL9602
2018-09-22T22:02:25.513Z,1537653745.513 [NAL9602] No Fault, FailCount= 2
2018-09-22T22:02:54.838Z,1537653774.838 [NAL9602](INFO): Powering up NAL9602
2018-09-22T22:03:05.638Z,1537653785.638 [NAL9602](INFO): NAL9602 initialized
2018-09-22T22:07:27.206Z,1537654047.206 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for altitude
2018-09-22T22:07:27.206Z,1537654047.206 [RDI_Pathfinder](ERROR): Failed to parse:
:BD,        +0.00,        +0.   +0.00,   0.00,1405.91
2018-09-22T22:08:14.498Z,1537654094.498 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-22T22:08:14.499Z,1537654094.499 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-3278,V
2018-09-22T22:10:46.594Z,1537654246.594 [NAL9602](INFO): GPS fix at 20180922T221035: (36.836076, -121.910887)
2018-09-22T22:10:46.658Z,1537654246.658 [trackPatch:SurfaceCommsSplit:C:A] Stopped
2018-09-22T22:10:46.659Z,1537654246.659 [trackPatch:SurfaceCommsSplit:C:B] Running Loop=1
2018-09-22T22:10:47.062Z,1537654247.062 [trackPatch:SurfaceCommsSplit:C:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-22T22:10:51.992Z,1537654251.992 [DataOverHttps](INFO): Sending 64 bytes from file Logs/20180922T190757/Courier0057.lzma
2018-09-22T22:10:52.762Z,1537654252.762 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0057.lzma.bak
2018-09-22T22:10:52.762Z,1537654252.762 [DataOverHttps](INFO): SBD MOMSN=8563144
2018-09-22T22:11:03.132Z,1537654263.132 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180922T190757/Courier0060.lzma
2018-09-22T22:11:03.909Z,1537654263.909 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0060.lzma.bak
2018-09-22T22:11:03.910Z,1537654263.910 [DataOverHttps](INFO): SBD MOMSN=8563147
2018-09-22T22:11:13.931Z,1537654273.931 [DataOverHttps](INFO): Sending 416 bytes from file Logs/20180922T190757/Express0058.lzma
2018-09-22T22:11:15.517Z,1537654275.517 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0058.lzma.bak
2018-09-22T22:11:15.518Z,1537654275.518 [DataOverHttps](INFO): SBD MOMSN=8563149
2018-09-22T22:11:19.510Z,1537654279.510 [NAL9602](INFO): Powering down
2018-09-22T22:11:25.562Z,1537654285.562 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180922T190757/Express0061.lzma
2018-09-22T22:11:26.317Z,1537654286.317 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0061.lzma.bak
2018-09-22T22:11:26.317Z,1537654286.317 [DataOverHttps](INFO): SBD MOMSN=8563165
2018-09-22T22:11:26.819Z,1537654286.819 [trackPatch:SurfaceCommsSplit:C:B] Stopped
2018-09-22T22:11:26.819Z,1537654286.819 [trackPatch:SurfaceCommsSplit:C:C] Running Loop=1
2018-09-22T22:11:27.201Z,1537654287.201 [trackPatch:SurfaceCommsSplit:C:C](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-22T22:11:30.380Z,1537654290.380 [NAL9602](INFO): Powering up
2018-09-22T22:11:41.331Z,1537654301.331 [NAL9602](INFO): NAL9602 initialized
2018-09-22T22:12:17.732Z,1537654337.732 [NAL9602](INFO): SBD MO Status=0, MOMSN=1157, MT Status=0, MTMSN=0
2018-09-22T22:12:17.732Z,1537654337.732 [NAL9602](INFO): No messages in MT queue
2018-09-22T22:13:46.957Z,1537654426.957 [trackPatch](INFO): Timed out from 2018-09-22T21:43:46.9Z
2018-09-22T22:13:46.961Z,1537654426.961 [MissionManager](INFO): trackPatch is completed.
2018-09-22T22:13:46.961Z,1537654426.961 [MissionManager](INFO): Uninitializing Mission trackPatch
2018-09-22T22:13:46.961Z,1537654426.961 [trackPatch] Stopped
2018-09-22T22:13:46.961Z,1537654426.961 [trackPatch](DEBUG): Aggregate::uninitialize trackPatch
2018-09-22T22:13:46.962Z,1537654426.962 [trackPatch:A.AltitudeEnvelope] Stopped
2018-09-22T22:13:46.962Z,1537654426.962 [trackPatch:A.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-22T22:13:46.962Z,1537654426.962 [trackPatch:B.DepthEnvelope] Stopped
2018-09-22T22:13:46.962Z,1537654426.962 [trackPatch:B.DepthEnvelope](DEBUG): Uninitialize.
2018-09-22T22:13:46.962Z,1537654426.962 [trackPatch:SurfaceCommsSplit] Stopped
2018-09-22T22:13:46.962Z,1537654426.962 [trackPatch:SurfaceCommsSplit](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit
2018-09-22T22:13:46.962Z,1537654426.962 [trackPatch:SurfaceCommsSplit:A.GoToSurface] Stopped
2018-09-22T22:13:46.962Z,1537654426.962 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-22T22:13:46.962Z,1537654426.962 [trackPatch:SurfaceCommsSplit:C] Stopped
2018-09-22T22:13:46.962Z,1537654426.962 [trackPatch:SurfaceCommsSplit:C](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit:C
2018-09-22T22:13:46.963Z,1537654426.963 [trackPatch:SurfaceCommsSplit:C:C] Stopped
2018-09-22T22:13:46.963Z,1537654426.963 [trackPatch:F.OffshoreEnvelope] Stopped
2018-09-22T22:13:46.963Z,1537654426.963 [trackPatch:F.OffshoreEnvelope](DEBUG): Uninitialize OffshoreEnvelopeComponent.
2018-09-22T22:13:46.963Z,1537654426.963 [trackPatch:G.WaterDepthEnvelope] Stopped
2018-09-22T22:13:46.963Z,1537654426.963 [trackPatch:G.WaterDepthEnvelope](DEBUG): Uninitialize WaterDepthEnvelopeComponent.
2018-09-22T22:13:46.963Z,1537654426.963 [trackPatch:H.Pitch] Stopped
2018-09-22T22:13:46.963Z,1537654426.963 [trackPatch:I.Buoyancy] Stopped
2018-09-22T22:13:46.963Z,1537654426.963 [trackPatch:I.Buoyancy](DEBUG): Uninitialize Buoyancy Component.
2018-09-22T22:13:46.963Z,1537654426.963 [trackPatch:Science] Stopped
2018-09-22T22:13:46.963Z,1537654426.963 [trackPatch:Science](DEBUG): Aggregate::uninitialize trackPatch:Science
2018-09-22T22:13:46.963Z,1537654426.963 [trackPatch:Science:G] Stopped
2018-09-22T22:13:46.963Z,1537654426.963 [trackPatch:Science:Read_Oil] Stopped
2018-09-22T22:13:46.964Z,1537654426.964 [trackPatch:Science:PeakDetectChl] Stopped
2018-09-22T22:13:46.964Z,1537654426.964 [trackPatch:Science:PeakDetectChl](DEBUG): Aggregate::uninitialize trackPatch:Science:PeakDetectChl
2018-09-22T22:13:46.964Z,1537654426.964 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2018-09-22T22:13:46.964Z,1537654426.964 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-22T22:13:46.964Z,1537654426.964 [trackPatch:K.SetSpeed] Stopped
2018-09-22T22:13:46.964Z,1537654426.964 [trackPatch:K.SetSpeed](DEBUG): Uninitialize.
2018-09-22T22:13:46.964Z,1537654426.964 [trackPatch:L.DepthEnvelope] Stopped
2018-09-22T22:13:46.964Z,1537654426.964 [trackPatch:L.DepthEnvelope](DEBUG): Uninitialize.
2018-09-22T22:13:46.964Z,1537654426.964 [trackPatch:M.YoYo] Stopped
2018-09-22T22:13:46.964Z,1537654426.964 [trackPatch:M.YoYo](DEBUG): Uninitialize YoYoComponent.
2018-09-22T22:13:47.403Z,1537654427.403 [MissionManager](IMPORTANT): Started mission Default
2018-09-22T22:13:47.403Z,1537654427.403 [Default] Running Loop=1
2018-09-22T22:13:47.403Z,1537654427.403 [Default](DEBUG): Aggregate::initialize Default
2018-09-22T22:13:47.403Z,1537654427.403 [Default:B.GoToSurface] Running Loop=1
2018-09-22T22:13:47.403Z,1537654427.403 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-22T22:13:47.404Z,1537654427.404 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-22T22:13:47.404Z,1537654427.404 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-22T22:13:47.404Z,1537654427.404 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-22T22:13:47.405Z,1537654427.405 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-22T22:13:47.405Z,1537654427.405 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-22T22:13:47.406Z,1537654427.406 [Default:A.Wait] Running Loop=1
2018-09-22T22:13:47.406Z,1537654427.406 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-22T22:14:00.600Z,1537654440.600 [Default:A.Wait](INFO): Done Waiting.
2018-09-22T22:14:00.600Z,1537654440.600 [Default:A.Wait] Stopped
2018-09-22T22:14:00.600Z,1537654440.600 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-22T22:14:00.972Z,1537654440.972 [Default:CheckIn] Running Loop=1
2018-09-22T22:14:00.973Z,1537654440.973 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-22T22:14:00.977Z,1537654440.977 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-22T22:15:01.478Z,1537654501.478 [NAL9602](INFO): GPS fix at 20180922T221450: (36.836659, -121.910569)
2018-09-22T22:15:01.543Z,1537654501.543 [Default:CheckIn:Read_GPS] Stopped
2018-09-22T22:15:01.543Z,1537654501.543 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-22T22:15:06.073Z,1537654506.073 [DataOverHttps](INFO): Sending 64 bytes from file Logs/20180922T190757/Courier0063.lzma
2018-09-22T22:15:06.821Z,1537654506.821 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0063.lzma.bak
2018-09-22T22:15:06.822Z,1537654506.822 [DataOverHttps](INFO): SBD MOMSN=8563205
2018-09-22T22:15:15.924Z,1537654515.924 [DataOverHttps](INFO): Sending 109 bytes from file Logs/20180922T190757/Express0064.lzma
2018-09-22T22:15:16.697Z,1537654516.697 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0064.lzma.bak
2018-09-22T22:15:16.697Z,1537654516.697 [DataOverHttps](INFO): SBD MOMSN=8563208
2018-09-22T22:15:17.259Z,1537654517.259 [Default:CheckIn:Read_Iridium] Stopped
2018-09-22T22:15:17.259Z,1537654517.259 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-22T22:15:17.259Z,1537654517.259 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-22T22:15:36.399Z,1537654536.399 [NAL9602](INFO): Powering down
2018-09-22T22:20:17.908Z,1537654817.908 [Default:CheckIn:C.Wait](INFO): Done Waiting.
2018-09-22T22:20:17.908Z,1537654817.908 [Default:CheckIn:C.Wait] Stopped
2018-09-22T22:20:17.908Z,1537654817.908 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-22T22:20:17.909Z,1537654817.909 [Default:CheckIn:D] Running Loop=1
2018-09-22T22:20:18.362Z,1537654818.362 [Default:CheckIn:D] Stopped
2018-09-22T22:20:18.362Z,1537654818.362 [Default:CheckIn:E] Running Loop=1
2018-09-22T22:20:21.515Z,1537654821.515 [Default:CheckIn:E](IMPORTANT): Default mission has been running for 6.515984 min 
2018-09-22T22:20:21.515Z,1537654821.515 [Default:CheckIn:E] Stopped
2018-09-22T22:20:21.515Z,1537654821.515 [Default:CheckIn](INFO): Completed Default:CheckIn
2018-09-22T22:20:21.515Z,1537654821.515 [Default:CheckIn] Stopped
2018-09-22T22:20:21.515Z,1537654821.515 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-22T22:20:21.516Z,1537654821.516 [Default:CheckIn](INFO): Running loop #2
2018-09-22T22:20:21.516Z,1537654821.516 [Default:CheckIn] Running Loop=2
2018-09-22T22:20:21.516Z,1537654821.516 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-22T22:20:21.516Z,1537654821.516 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-22T22:20:21.986Z,1537654821.986 [NAL9602](INFO): Powering up
2018-09-22T22:20:33.182Z,1537654833.182 [NAL9602](INFO): NAL9602 initialized
2018-09-22T22:20:51.189Z,1537654851.189 [NAL9602](INFO): SBD MO Status=0, MOMSN=1158, MT Status=0, MTMSN=0
2018-09-22T22:20:51.189Z,1537654851.189 [NAL9602](INFO): No messages in MT queue
2018-09-22T22:21:22.606Z,1537654882.606 [DataOverHttps](IMPORTANT): SBD MTMSN=20180922T222112
2018-09-22T22:21:27.173Z,1537654887.173 [DataOverHttps](INFO): Received command:load Science/trackPatch.xml;set trackPatch.MissionTimeout 30 min;set trackPatch.YoYoMinDepth 2 m;set trackPatch.YoYoMaxDepth 10 m;set trackPatch.PeakChlShallowBnd 3 m;set trackPatch.PeakChlDeepBnd 8 m;run
2018-09-22T22:21:27.212Z,1537654887.212 [CommandLine](IMPORTANT): got command load ./Missions/Science/trackPatch.xml
2018-09-22T22:21:27.213Z,1537654887.213 [MissionManager](INFO): Loading Mission: ./Missions/Science/trackPatch.xml
2018-09-22T22:21:27.433Z,1537654887.433 [MissionManager](INFO): DefineArg trackPatch.MinAltitude = 5.000000 m
2018-09-22T22:21:27.435Z,1537654887.435 [MissionManager](INFO): DefineArg trackPatch.MaxDepth = 65.000000 m
2018-09-22T22:21:27.450Z,1537654887.450 [MissionManager](INFO): DefineArg trackPatch.MinWaterDepth = 10.000000 m
2018-09-22T22:21:27.452Z,1537654887.452 [MissionManager](INFO): DefineArg trackPatch.MinOffshore = 2000.000000 m
2018-09-22T22:21:27.455Z,1537654887.455 [MissionManager](INFO): DefineArg trackPatch.NeedCommsTime = 180.000000 min
2018-09-22T22:21:27.457Z,1537654887.457 [MissionManager](INFO): DefineArg trackPatch.MissionTimeout = 56.000000 h
2018-09-22T22:21:27.459Z,1537654887.459 [MissionManager](INFO): DefineArg trackPatch.MassDefault = 0.000000 cm
2018-09-22T22:21:27.462Z,1537654887.462 [MissionManager](INFO): DefineArg trackPatch.BuoyancyNeutral = 205.000004 cc
2018-09-22T22:21:27.464Z,1537654887.464 [MissionManager](INFO): DefineArg trackPatch.YoYoMinDepth = 3.000000 m
2018-09-22T22:21:27.467Z,1537654887.467 [MissionManager](INFO): DefineArg trackPatch.YoYoMaxDepth = 30.000000 m
2018-09-22T22:21:27.469Z,1537654887.469 [MissionManager](INFO): DefineArg trackPatch.YoYoUpPitch = 20.000000 arcdeg
2018-09-22T22:21:27.471Z,1537654887.471 [MissionManager](INFO): DefineArg trackPatch.YoYoDownPitch = -20.000000 arcdeg
2018-09-22T22:21:27.474Z,1537654887.474 [MissionManager](INFO): DefineArg trackPatch.Speed = 1.000000 m/s
2018-09-22T22:21:27.476Z,1537654887.476 [MissionManager](INFO): DefineArg trackPatch.WpMaxDistance = 1000.000000 m
2018-09-22T22:21:27.478Z,1537654887.478 [MissionManager](INFO): DefineArg trackPatch.WpTimeout = 8000.000000 s
2018-09-22T22:21:27.480Z,1537654887.480 [MissionManager](INFO): DefineArg trackPatch.WaterFrame = 1 bool
2018-09-22T22:21:27.482Z,1537654887.482 [MissionManager](INFO): DefineArg trackPatch.Repeat = 20.000000 count
2018-09-22T22:21:27.505Z,1537654887.505 [MissionManager](INFO): DefineArg trackPatch.Turn = 90.000000 arcdeg
2018-09-22T22:21:27.507Z,1537654887.507 [MissionManager](INFO): DefineArg trackPatch.Reverse = 180.000000 arcdeg
2018-09-22T22:21:27.514Z,1537654887.514 [MissionManager](INFO): DefineArg trackPatch.TwoPi = 360.000000 arcdeg
2018-09-22T22:21:27.516Z,1537654887.516 [MissionManager](INFO): DefineArg trackPatch.LowPassWindowLen = 20.000000 count
2018-09-22T22:21:27.522Z,1537654887.522 [MissionManager](INFO): DefineArg trackPatch.PeakChlShallowBnd = 10.000000 m
2018-09-22T22:21:27.525Z,1537654887.525 [MissionManager](INFO): DefineArg trackPatch.PeakChlDeepBnd = 20.000000 m
2018-09-22T22:21:27.528Z,1537654887.528 [MissionManager](INFO): DefineArg trackPatch.FilterWidth = 4.000000 count
2018-09-22T22:21:27.545Z,1537654887.545 [MissionManager](INFO): DefineArg trackPatch.BeginThreshold = nan ug/l
2018-09-22T22:21:27.547Z,1537654887.547 [MissionManager](INFO): DefineArg trackPatch.OffPeakFraction = 80.000000 %
2018-09-22T22:21:27.549Z,1537654887.549 [MissionManager](INFO): DefineArg trackPatch.PatchMode = 0 bool
2018-09-22T22:21:27.551Z,1537654887.551 [MissionManager](INFO): DefineArg trackPatch.WpBearing = -90.000000 arcdeg
2018-09-22T22:21:27.574Z,1537654887.574 [MissionManager](INFO): DefineOutput trackPatch.PatchDetectOn = 0 bool
2018-09-22T22:21:27.576Z,1537654887.576 [MissionManager](INFO): DefineOutput trackPatch.WpDone = 0 bool
2018-09-22T22:21:27.579Z,1537654887.579 [MissionManager](INFO): DefineOutput trackPatch.PatchChl = nan ug/l
2018-09-22T22:21:27.581Z,1537654887.581 [MissionManager](INFO): DefineOutput trackPatch.PatchChlDepth = nan m
2018-09-22T22:21:27.583Z,1537654887.583 [MissionManager](INFO): DefineOutput trackPatch.PatchChlLatitude = nan arcdeg
2018-09-22T22:21:27.604Z,1537654887.604 [MissionManager](INFO): DefineOutput trackPatch.PatchChlLongitude = nan arcdeg
2018-09-22T22:21:27.606Z,1537654887.606 [MissionManager](INFO): DefineOutput trackPatch.PatchChlDistance = 0.000000 m
2018-09-22T22:21:27.607Z,1537654887.607 [trackPatch:A.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-22T22:21:27.612Z,1537654887.612 [trackPatch:B.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-22T22:21:27.632Z,1537654887.632 [MissionManager](INFO): Inserting Stack: Missions/Insert/Surface.xml
2018-09-22T22:21:27.697Z,1537654887.697 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.SurfaceDepthRate = nan m/s
2018-09-22T22:21:27.699Z,1537654887.699 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.SurfacePitch = 20.000000 arcdeg
2018-09-22T22:21:27.702Z,1537654887.702 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.SurfaceSpeed = 1.000000 m/s
2018-09-22T22:21:27.704Z,1537654887.704 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.IridiumTimeout = 30.000000 min
2018-09-22T22:21:27.724Z,1537654887.724 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.UnpackSplitAtSurface = 0 bool
2018-09-22T22:21:27.725Z,1537654887.725 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-22T22:21:27.754Z,1537654887.754 [MissionManager](INFO): RedefineArg trackPatch:SurfaceCommsSplit.SurfacePitch = value:20.000000 arcdeg
2018-09-22T22:21:27.756Z,1537654887.756 [MissionManager](INFO): RedefineArg trackPatch:SurfaceCommsSplit.SurfaceSpeed = value:1.000000 m/s
2018-09-22T22:21:27.758Z,1537654887.758 [MissionManager](INFO): RedefineArg trackPatch:SurfaceCommsSplit.UnpackSplitAtSurface = value:1 bool
2018-09-22T22:21:27.759Z,1537654887.759 [MissionManager](INFO): Inserting Stack: Missions/Insert/Surface.xml
2018-09-22T22:21:27.812Z,1537654887.812 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.SurfaceDepthRate = nan m/s
2018-09-22T22:21:27.829Z,1537654887.829 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.SurfacePitch = 20.000000 arcdeg
2018-09-22T22:21:27.831Z,1537654887.831 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.SurfaceSpeed = 1.000000 m/s
2018-09-22T22:21:27.833Z,1537654887.833 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.IridiumTimeout = 30.000000 min
2018-09-22T22:21:27.835Z,1537654887.835 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.UnpackSplitAtSurface = 0 bool
2018-09-22T22:21:27.836Z,1537654887.836 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-22T22:21:27.865Z,1537654887.865 [MissionManager](INFO): RedefineArg trackPatch:SurfaceComms:SurfaceComms.SurfacePitch = value:20.000000 arcdeg
2018-09-22T22:21:27.880Z,1537654887.880 [MissionManager](INFO): RedefineArg trackPatch:SurfaceComms:SurfaceComms.SurfaceSpeed = value:1.000000 m/s
2018-09-22T22:21:27.886Z,1537654887.886 [trackPatch:F.OffshoreEnvelope](DEBUG): Construct OffshoreEnvelope.
2018-09-22T22:21:27.891Z,1537654887.891 [trackPatch:G.WaterDepthEnvelope](DEBUG): Construct WaterDepthEnvelope.
2018-09-22T22:21:27.895Z,1537654887.895 [trackPatch:H.Pitch](DEBUG): Construct.
2018-09-22T22:21:27.899Z,1537654887.899 [trackPatch:I.Buoyancy](DEBUG): Construct Buoyancy.
2018-09-22T22:21:27.901Z,1537654887.901 [MissionManager](INFO): Inserting Stack: Missions/Insert/Science.xml
2018-09-22T22:21:28.048Z,1537654888.048 [MissionManager](INFO): DefineArg trackPatch:Science.SampleISUS = 0 bool
2018-09-22T22:21:28.050Z,1537654888.050 [MissionManager](INFO): DefineArg trackPatch:Science.SampleISUSmaxPitch = 60.000000 arcdeg
2018-09-22T22:21:28.052Z,1537654888.052 [MissionManager](INFO): DefineArg trackPatch:Science.SampleISUSminPitch = -60.000000 arcdeg
2018-09-22T22:21:28.054Z,1537654888.054 [MissionManager](INFO): DefineArg trackPatch:Science.PeakDetectChlActive = 0 bool
2018-09-22T22:21:28.056Z,1537654888.056 [MissionManager](INFO): DefineArg trackPatch:Science.HighestChlPeakReportActive = 0 bool
2018-09-22T22:21:28.058Z,1537654888.058 [MissionManager](INFO): DefineArg trackPatch:Science.PatchTracking = 1 bool
2018-09-22T22:21:28.060Z,1537654888.060 [MissionManager](INFO): DefineArg trackPatch:Science.FilterWidthHorizontal = 3.000000 count
2018-09-22T22:21:28.063Z,1537654888.063 [MissionManager](INFO): DefineArg trackPatch:Science.NumProfilesSlidingwindow = 100.000000 count
2018-09-22T22:21:28.065Z,1537654888.065 [MissionManager](INFO): DefineArg trackPatch:Science.OffPeakFractionHorizontal = 80.000000 %
2018-09-22T22:21:28.067Z,1537654888.067 [MissionManager](INFO): DefineArg trackPatch:Science.PeakDetectNO3Active = 0 bool
2018-09-22T22:21:28.094Z,1537654888.094 [MissionManager](INFO): DefineArg trackPatch:Science.PeakDetectOilActive = 0 bool
2018-09-22T22:21:28.096Z,1537654888.096 [MissionManager](INFO): DefineArg trackPatch:Science.UpwardDerivativeOfTemperatureActive = 0 bool
2018-09-22T22:21:28.099Z,1537654888.099 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledAanderaaO2 = 0.000000 bool
2018-09-22T22:21:28.101Z,1537654888.101 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledNeilBrown = 0.000000 bool
2018-09-22T22:21:28.104Z,1537654888.104 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledSeabird = 0.000000 bool
2018-09-22T22:21:28.122Z,1537654888.122 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledTurbulence_NPS = 0.000000 bool
2018-09-22T22:21:28.125Z,1537654888.125 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledWetLabsBB2FL = 0.000000 bool
2018-09-22T22:21:28.127Z,1537654888.127 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledWetLabsSeaOWL_UV_A = 1.000000 bool
2018-09-22T22:21:28.145Z,1537654888.145 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledISUS = 0.000000 bool
2018-09-22T22:21:28.147Z,1537654888.147 [MissionManager](INFO): DefineArg trackPatch:Science.LowPassWindowLength = 20.000000 count
2018-09-22T22:21:28.150Z,1537654888.150 [MissionManager](INFO): DefineArg trackPatch:Science.PeakChlShallowBound = 10.000000 m
2018-09-22T22:21:28.152Z,1537654888.152 [MissionManager](INFO): DefineArg trackPatch:Science.PeakChlDeepBound = 20.000000 m
2018-09-22T22:21:28.169Z,1537654888.169 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChl = 0.000000 ug/l
2018-09-22T22:21:28.171Z,1537654888.171 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlDepth = 0.000000 m
2018-09-22T22:21:28.174Z,1537654888.174 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlTemperature = 0.000000 degC
2018-09-22T22:21:28.176Z,1537654888.176 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlLatitude = nan arcdeg
2018-09-22T22:21:28.189Z,1537654888.189 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlLongitude = nan arcdeg
2018-09-22T22:21:28.191Z,1537654888.191 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3 = 0.000000 umol/l
2018-09-22T22:21:28.193Z,1537654888.193 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3Depth = 0.000000 m
2018-09-22T22:21:28.196Z,1537654888.196 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3Latitude = nan arcdeg
2018-09-22T22:21:28.220Z,1537654888.220 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3Longitude = nan arcdeg
2018-09-22T22:21:28.222Z,1537654888.222 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChl = 0.000000 m
2018-09-22T22:21:28.226Z,1537654888.226 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlDepth = 0.000000 m
2018-09-22T22:21:28.250Z,1537654888.250 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlLatitude = nan arcdeg
2018-09-22T22:21:28.255Z,1537654888.255 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlLongitude = nan arcdeg
2018-09-22T22:21:28.270Z,1537654888.270 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlDistance = nan m
2018-09-22T22:21:28.275Z,1537654888.275 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOil = 0.000000 kg/m3
2018-09-22T22:21:28.298Z,1537654888.298 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOilDepth = 0.000000 m
2018-09-22T22:21:28.300Z,1537654888.300 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOilLatitude = nan arcdeg
2018-09-22T22:21:28.303Z,1537654888.303 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOilLongitude = nan arcdeg
2018-09-22T22:21:28.341Z,1537654888.341 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-22T22:21:28.371Z,1537654888.371 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-22T22:21:28.393Z,1537654888.393 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-22T22:21:28.411Z,1537654888.411 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-22T22:21:28.428Z,1537654888.428 [MissionManager](INFO): RedefineArg trackPatch:Science.PeakDetectChlActive = value:1 bool
2018-09-22T22:21:28.429Z,1537654888.429 [MissionManager](INFO): RedefineArg trackPatch:Science.PatchTracking = value:1 bool
2018-09-22T22:21:28.431Z,1537654888.431 [MissionManager](INFO): RedefineArg trackPatch:Science.LowPassWindowLength = reader:trackPatch.LowPassWindowLen
2018-09-22T22:21:28.432Z,1537654888.432 [MissionManager](INFO): RedefineArg trackPatch:Science.PeakChlShallowBound = reader:trackPatch.PeakChlShallowBnd
2018-09-22T22:21:28.434Z,1537654888.434 [MissionManager](INFO): RedefineArg trackPatch:Science.PeakChlDeepBound = reader:trackPatch.PeakChlDeepBnd
2018-09-22T22:21:28.435Z,1537654888.435 [MissionManager](INFO): RedefineArg trackPatch:Science.OffPeakFractionHorizontal = reader:trackPatch.OffPeakFraction
2018-09-22T22:21:28.436Z,1537654888.436 [trackPatch:K.SetSpeed](DEBUG): Construct.
2018-09-22T22:21:28.438Z,1537654888.438 [trackPatch:L.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-22T22:21:28.445Z,1537654888.445 [trackPatch:M.YoYo](DEBUG): Construct YoYo.
2018-09-22T22:21:28.452Z,1537654888.452 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-22T22:21:28.510Z,1537654888.510 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-22T22:21:28.515Z,1537654888.515 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-22T22:21:28.533Z,1537654888.533 [trackPatch:PatchDetectHorizontal:InLegWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-22T22:21:28.547Z,1537654888.547 [trackPatch:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-22T22:21:28.601Z,1537654888.601 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Trigger="Tethys/Trigger" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Trigger http://okeanids.mbari.org/tethys/Xml/Trigger.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="trackPatch">

    <Description>
        Vehicle runs yo-yos, with patch detect enabled for cholorphyll
        concentration.
    </Description>

<!-- Vehicle safety parameters -->

    <DefineArg Name="MinAltitude"><Description>
        Minimum altitude for the entire mission.
    </Description><Units:meter/><Value>5</Value></DefineArg>

    <DefineArg Name="MaxDepth"><Description>
        Maximum depth for the entire mission.
    </Description><Units:meter/><Value>65</Value></DefineArg>

    <DefineArg Name="MinWaterDepth"><Description>
        Minimum water depth for the entire mission.
    </Description><Units:meter/><Value>10</Value></DefineArg>

    <DefineArg Name="MinOffshore"><Description>
        Minimum offshore distance for the entire mission.
    </Description><Units:meter/><Value>2000</Value></DefineArg>

    <DefineArg Name="NeedCommsTime"><Description>
        Maximum time between surfacings for communications
    </Description><Units:minute/><Value>180</Value></DefineArg>

    <DefineArg Name="MissionTimeout"><Description>
        Timeout for the entire mission
    </Description><Units:hour/><Value>56</Value></DefineArg>

    <DefineArg Name="MassDefault"><Description>
        Static setting for mass during the mission. Defaults to massDefault
        setting in the Config/Control.cfg file.
    </Description><Control:VerticalControl.massDefault/></DefineArg>

    <DefineArg Name="BuoyancyNeutral"><Description>
        Buoyancy bladder position while performing the YoYo behavior. Defaults
        to buoyancyNeutral setting in the Config/Control.cfg file.
    </Description><Control:VerticalControl.buoyancyNeutral/></DefineArg>

<!-- Basic guidance settings -->

    <DefineArg Name="YoYoMinDepth"><Description>
        Minimum depth during yo-yo's.
    </Description><Units:meter/><Value>3.0</Value></DefineArg>

    <DefineArg Name="YoYoMaxDepth"><Description>
        Maximum depth during yo-yo's.
    </Description><Units:meter/><Value>30.0</Value></DefineArg>

    <DefineArg Name="YoYoUpPitch"><Description>
        Pitch when yo-yo's are ascending.
    </Description><Units:degree/><Value>20.0</Value></DefineArg>

    <DefineArg Name="YoYoDownPitch"><Description>
        Pitch when yo-yo's are descending.
    </Description><Units:degree/><Value>-20.0</Value></DefineArg>

    <DefineArg Name="Speed"><Description>
        Vehicle speed.
    </Description><Units:meter_per_second/><Value>1</Value></DefineArg>

    <DefineArg Name="WpMaxDistance"><Description>
        Maximum length of each tracking leg
<!--debug
    </Description><Units:meter/><Value>7500</Value></DefineArg>
-->
    </Description><Units:meter/><Value>1000</Value></DefineArg>

    <DefineArg Name="WpTimeout"><Description>
        Maximum duration of each tracking leg
    </Description><Units:second/><Value>8000</Value></DefineArg>

    <DefineArg Name="WaterFrame"><Description>
        Set WaterFrame true to drive towards waypoints in the water frame of
        reference
    </Description><True/></DefineArg>

    <DefineArg Name="Repeat"><Description>
        Maximum number of tracking legs
    </Description><Units:count/><Value>20</Value></DefineArg>

<!-- Constant settings for each tracking leg -->

    <DefineArg Name="Turn"><Description>
        Amount to turn at each leg
    </Description><Units:degree/><Value>90</Value></DefineArg>

    <DefineArg Name="Reverse"><Description>
        Change in bearing which reverses vehicle direction
    </Description><Units:degree/><Value>180</Value></DefineArg>

    <DefineArg Name="TwoPi"><Description>
        Applied to stop run-up of angles
    </Description><Units:degree/><Value>360</Value></DefineArg>

    <DefineArg Name="LowPassWindowLen"><Description>
        Low-pass window length (based on depth sensor sampling interval 0.4
        second) for low-pass filtering.
    </Description><Units:count/><Value>20</Value></DefineArg>

    <DefineArg Name="PeakChlShallowBnd"><Description>
        Shallow depth bound for detecting chl peak on each descent or ascent
        profile.
<!--debug
    </Description><Units:meter/><Value>NaN</Value></DefineArg>
-->
    </Description><Units:meter/><Value>10</Value></DefineArg>

    <DefineArg Name="PeakChlDeepBnd"><Description>
        Deep depth bound for detecting chl peak on each descent or ascent
        profile.
<!--debug
    </Description><Units:meter/><Value>NaN</Value></DefineArg>
-->
    </Description><Units:meter/><Value>20</Value></DefineArg>

    <DefineArg Name="FilterWidth"><Description>
        Width of boxcar filter used in horizontal patch detection
    </Description><Units:count/><Value>4</Value></DefineArg>

    <DefineArg Name="BeginThreshold"><Description>
        If non-NaN, sets threshold for starting horizontal patch detection
    </Description><Units:microgram_per_liter/><Value>NaN</Value></DefineArg>

    <DefineArg Name="OffPeakFraction"><Description>
        When filtered horizontal value is this fraction of the peak, consider it
        outside the patch.
    </Description><Units:percent/><Value>80</Value></DefineArg>

    <DefineArg Name="PatchMode"><Description>
        If true, use center of "in peak" range as the turn-around point. If
        false use maximum horizontal peak location as the turn-around point.
    </Description><False/></DefineArg>

<!-- Variable Settings for each tracking leg -->

    <DefineArg Name="WpBearing"><Description>
        Bearing being followed in the current leg. Set this to initialize start
        direction of patch tracking.
    </Description><Units:degree/><Value>-90</Value></DefineArg>

    <DefineOutput Name="PatchDetectOn"><Description>
        Mission sets this to true when the patch has been crossed.
    </Description><False/></DefineOutput>

    <DefineOutput Name="WpDone"><Description>
        Mission sets this to true when the cross-patch waypoint has been
        reached.
    </Description><False/></DefineOutput>

    <DefineOutput Name="PatchChl"><Units:microgram_per_liter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlDepth"><Units:meter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlDistance"><Units:meter/><Value>0</Value></DefineOutput>

<!-- The timeout -->

    <Timeout Duration="MissionTimeout"/>

<!-- And now the mission -->

    <Guidance:AltitudeEnvelope>
        <Parallel/>
        <Setting><Guidance:AltitudeEnvelope.minAltitude/><Arg Name="MinAltitude"/></Setting>
    </Guidance:AltitudeEnvelope>

    <Guidance:DepthEnvelope>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="MaxDepth"/></Setting>
    </Guidance:DepthEnvelope>

    <Insert Filename="Insert/Surface.xml" Id="SurfaceCommsSplit">
        <RedefineArg Name="SurfacePitch"><Units:degree/><Value>20</Value></RedefineArg>
        <RedefineArg Name="SurfaceSpeed"><Units:meter_per_second/><Value>1</Value></RedefineArg>
        <RedefineArg Name="UnpackSplitAtSurface"><True/></RedefineArg>
    </Insert>

    <Aggregate Id="SurfaceComms">

        <When>
            <Called/>
        </When>

        <Insert Filename="Insert/Surface.xml">
            <RedefineArg Name="SurfacePitch"><Units:degree/><Value>20</Value></RedefineArg>
            <RedefineArg Name="SurfaceSpeed"><Units:meter_per_second/><Value>1</Value></RedefineArg>
        </Insert>

    </Aggregate>

<!-- GPS Update.  Don't go too long w/o a GPS fix. -->

    <Aggregate Id="NeedComms">

        <When>
            <Universal:platform_pitch_angle/>
            <Gt><Units:degree/><Value>0</Value></Gt>
            <And><Elapsed><Universal:time_fix/></Elapsed><Gt><Arg Name="NeedCommsTime"/></Gt></And>
            <Or><Elapsed><Universal:time_fix/></Elapsed><Gt><Arg Name="NeedCommsTime"/><Add><Units:minute/><Value>10</Value></Add></Gt></Or>
        </When>

        <Syslog Severity="Important">NeedComms Timeout Surfacing</Syslog>

        <Call RefId="SurfaceComms"/>

    </Aggregate>

    <Guidance:OffshoreEnvelope>
        <Parallel/>
        <Setting><Guidance:OffshoreEnvelope.minOffshore/><Arg Name="MinOffshore"/></Setting>
    </Guidance:OffshoreEnvelope>

    <Guidance:WaterDepthEnvelope>
        <Parallel/>
        <Setting><Guidance:WaterDepthEnvelope.minWaterDepth/><Arg Name="MinWaterDepth"/></Setting>
    </Guidance:WaterDepthEnvelope>

    <Guidance:Pitch>
        <Parallel/>
        <Setting><Guidance:Pitch.massPosition/><Arg Name="MassDefault"/></Setting>
    </Guidance:Pitch>

    <Guidance:Buoyancy>
        <Parallel/>
        <Setting><Guidance:Buoyancy.position /><Arg Name="BuoyancyNeutral"/></Setting>
    </Guidance:Buoyancy>

<!-- If we're executing here or below, lets' get science data! -->

    <Insert Filename="Insert/Science.xml">
        <RedefineArg Name="PeakDetectChlActive"><True/></RedefineArg>
        <RedefineArg Name="PatchTracking"><True/></RedefineArg>
        <RedefineArg Name="LowPassWindowLength"><Arg Name="LowPassWindowLen"/></RedefineArg>
        <RedefineArg Name="PeakChlShallowBound"><Arg Name="PeakChlShallowBnd"/></RedefineArg>
        <RedefineArg Name="PeakChlDeepBound"><Arg Name="PeakChlDeepBnd"/></RedefineArg>
        <RedefineArg Name="OffPeakFractionHorizontal"><Arg Name="OffPeakFraction"/></RedefineArg>
    </Insert>

    <Guidance:SetSpeed>
        <Parallel/>
        <Setting><Guidance:SetSpeed.speed/><Arg Name="Speed"/></Setting>
    </Guidance:SetSpeed>

    <Guidance:DepthEnvelope>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.minDepth/><Arg Name="YoYoMinDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="YoYoMaxDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:DepthEnvelope.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:DepthEnvelope>

    <Guidance:YoYo>
        <Parallel/>
        <Setting><Guidance:YoYo.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:YoYo.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:YoYo>

    <Aggregate Id="PatchDetectHorizontal">

        <Sequence Repeat="Repeat"/>

        <Aggregate Id="PatchDetection">

            <When>
                <Arg Name="PatchDetectOn"/>
            </When>

            <Trigger:PeakDetectHorizontal Id="PeakDetectHorizontalTrigger">
                <Sequence/>
                <Break><Arg Name="WpDone"/>
                </Break>
                <Setting><Trigger:PeakDetectHorizontal.patchTracking/><Units:bool/><Value>1</Value></Setting>
                <Setting><Trigger:PeakDetectHorizontal.detectFrom/><Arg Name="Science:PeakChl"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.depthFrom/><Arg Name="Science:PeakChlDepth"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.latitudeFrom/><Arg Name="Science:PeakChlLatitude"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.longitudeFrom/><Arg Name="Science:PeakChlLongitude"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.beginThreshold/><Arg Name="BeginThreshold"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.offPeakFraction/><Arg Name="OffPeakFraction"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.filterWidth/><Arg Name="FilterWidth"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.centerPeak/><Arg Name="PatchMode"/></Setting>
                <OutputArg Name="PatchChl"><Trigger:PeakDetectHorizontal.peakDetect/></OutputArg>
                <OutputArg Name="PatchChlDepth"><Trigger:PeakDetectHorizontal.peakDepth/></OutputArg>
                <OutputArg Name="PatchChlLatitude"><Trigger:PeakDetectHorizontal.peakLatitude/></OutputArg>
                <OutputArg Name="PatchChlLongitude"><Trigger:PeakDetectHorizontal.peakLongitude/></OutputArg>
                <OutputArg Name="PatchChlDistance"><Trigger:PeakDetectHorizontal.peakDistance/></OutputArg>
            </Trigger:PeakDetectHorizontal>

            <Syslog Severity="Important">Fell below OffPeakFraction. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Universal:depth/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog>

            <SendData Service="Express"><Arg Name="PatchChl"/><Arg Name="PatchChlDepth"/><Arg Name="PatchChlLatitude"/><Arg Name="PatchChlLongitude"/>
            </SendData>

            <Assign Id="AssignPatchDetectOff"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

        </Aggregate>

        <Assign Id="AssignPatchDetectOn"><Sequence/><Arg Name="PatchDetectOn"/><True/></Assign>

        <Syslog Severity="Important">Next: bearing for CrossLeg: <Arg Name="WpBearing"/><Units:degree/>. WpMaxDistance = <Arg Name="WpMaxDistance"/><Units:meter/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>.</Syslog>

        <Aggregate Id="CrossLeg">

            <Description>
                This is a long leg across the width of the patch. Also the first
                leg in a mission run. Two waypoints run in parallel: a short run
                to the surfacing point, and a longer run to the edge of the
                patch.
            </Description>

            <Sequence/>

            <Break><Arg Name="WpDone"/>
                <Or><Arg Name="PatchDetectOn"/><Eq><False/></Eq></Or>
            </Break>

            <Guidance:Waypoint Id="CrossSurfaceWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="PatchChlDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Call RefId="SurfaceComms"/>

            <Guidance:Waypoint Id="CrossPeakWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="WpMaxDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

<!--debug-->
            <Syslog Severity="Important">CrossPeakWp done. Lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Universal:depth/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog> 

            <Assign Id="AssignPatchDetectOffInCrossLeg"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

            <Assign Id="AssignWpDoneInCrossLeg"><Sequence/><Arg Name="WpDone"/><True/></Assign>

        </Aggregate>

        <Assign Id="AssignWpBearingForInLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Add><Arg Name="Reverse"/></Add><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

        <Syslog Severity="Important">Next: bearing for InLeg: <Arg Name="WpBearing"/><Units:degree/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Universal:depth/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog> 

        <Guidance:Waypoint Id="InLegWp">
            <Description>
                Simply drive back towards the patch center
            </Description>
            <Sequence/>
            <Timeout Duration="WpTimeout"/>
            <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="PatchChlDistance"/></Setting>
            <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
            <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
        </Guidance:Waypoint>

        <Assign Id="AssignWpBearingForOutLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Sub><Arg Name="Turn"/></Sub><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

        <Syslog Severity="Important">Next: bearing for OutLeg: <Arg Name="WpBearing"/><Units:degree/>. WpMaxDistance = <Arg Name="WpMaxDistance"/><Units:meter/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Universal:depth/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog>

        <Call RefId="SurfaceCommsSplit"/>

        <Assign Id="AssignPatchDetectOnForOutLeg"><Sequence/><Arg Name="PatchDetectOn"/><True/></Assign>

        <Aggregate Id="OutLeg">

            <Description>
                Drive outward until edge of patch is detected.
            </Description>

            <Sequence/>

            <Break><Arg Name="WpDone"/>
                <Or><Arg Name="PatchDetectOn"/><Eq><False/></Eq></Or>
            </Break>

            <Guidance:Waypoint Id="OutLegWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="WpMaxDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Assign Id="AssignPatchDetectOffInOutLeg"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

            <Assign Id="AssignWpDoneInOutLeg"><Sequence/><Arg Name="WpDone"/><True/></Assign>

        </Aggregate>

        <Assign Id="AssignWpBearingForCrossLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Add><Arg Name="Reverse"/></Add><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

    </Aggregate>

</Mission>


2018-09-22T22:21:28.602Z,1537654888.602 [CommandLine](IMPORTANT): Loaded ./Missions/Science/trackPatch.xml
2018-09-22T22:21:40.199Z,1537654900.199 [CommandLine](IMPORTANT): got command set trackPatch.MissionTimeout 30.000000 minute
2018-09-22T22:21:40.199Z,1537654900.199 [CommandLine](IMPORTANT): got command set trackPatch.YoYoMinDepth 2.000000 meter
2018-09-22T22:21:40.200Z,1537654900.200 [CommandLine](IMPORTANT): got command set trackPatch.YoYoMaxDepth 10.000000 meter
2018-09-22T22:21:40.201Z,1537654900.201 [CommandLine](IMPORTANT): got command set trackPatch.PeakChlShallowBnd 3.000000 meter
2018-09-22T22:21:40.202Z,1537654900.202 [CommandLine](IMPORTANT): got command set trackPatch.PeakChlDeepBnd 8.000000 meter
2018-09-22T22:21:40.203Z,1537654900.203 [CommandLine](IMPORTANT): got command run
2018-09-22T22:21:40.204Z,1537654900.204 [CommandLine](IMPORTANT): Running 
2018-09-22T22:21:40.275Z,1537654900.275 [RDI_Pathfinder](ERROR): No DVL communication! Re-initializing
2018-09-22T22:21:40.275Z,1537654900.275 [RDI_Pathfinder] Communications Fault, FailCount= 1
2018-09-22T22:21:40.275Z,1537654900.275 [RDI_Pathfinder](ERROR): Communications Fault
2018-09-22T22:21:40.288Z,1537654900.288 [Default] Stopped
2018-09-22T22:21:40.288Z,1537654900.288 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-22T22:21:40.288Z,1537654900.288 [Default:B.GoToSurface] Stopped
2018-09-22T22:21:40.288Z,1537654900.288 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-22T22:21:40.288Z,1537654900.288 [Default:CheckIn] Stopped
2018-09-22T22:21:40.288Z,1537654900.288 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-22T22:21:40.289Z,1537654900.289 [Default:CheckIn:Read_GPS] Stopped
2018-09-22T22:21:40.289Z,1537654900.289 [MissionManager](IMPORTANT): Started mission trackPatch
2018-09-22T22:21:40.289Z,1537654900.289 [trackPatch] Running Loop=1
2018-09-22T22:21:40.289Z,1537654900.289 [trackPatch](DEBUG): Aggregate::initialize trackPatch
2018-09-22T22:21:40.289Z,1537654900.289 [trackPatch:A.AltitudeEnvelope] Running Loop=1
2018-09-22T22:21:40.289Z,1537654900.289 [trackPatch:A.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-22T22:21:40.290Z,1537654900.290 [trackPatch:B.DepthEnvelope] Running Loop=1
2018-09-22T22:21:40.290Z,1537654900.290 [trackPatch:B.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-22T22:21:40.290Z,1537654900.290 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-22T22:21:40.290Z,1537654900.290 [trackPatch:F.OffshoreEnvelope](DEBUG): Initialize OffshoreEnvelopeComponent.
2018-09-22T22:21:40.290Z,1537654900.290 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-22T22:21:40.290Z,1537654900.290 [trackPatch:G.WaterDepthEnvelope](DEBUG): Initialize WaterDepthEnvelopeComponent.
2018-09-22T22:21:40.290Z,1537654900.290 [trackPatch:H.Pitch] Running Loop=1
2018-09-22T22:21:40.290Z,1537654900.290 [trackPatch:H.Pitch](DEBUG): Initialize.
2018-09-22T22:21:40.290Z,1537654900.290 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-22T22:21:40.291Z,1537654900.291 [trackPatch:I.Buoyancy](DEBUG): Initialize Buoyancy Component.
2018-09-22T22:21:40.291Z,1537654900.291 [trackPatch:Science] Running Loop=1
2018-09-22T22:21:40.291Z,1537654900.291 [trackPatch:Science](DEBUG): Aggregate::initialize trackPatch:Science
2018-09-22T22:21:40.291Z,1537654900.291 [trackPatch:Science:A] Running Loop=1
2018-09-22T22:21:40.291Z,1537654900.291 [trackPatch:Science:B] Running Loop=1
2018-09-22T22:21:40.291Z,1537654900.291 [trackPatch:Science:C] Running Loop=1
2018-09-22T22:21:40.291Z,1537654900.291 [trackPatch:Science:D] Running Loop=1
2018-09-22T22:21:40.291Z,1537654900.291 [trackPatch:Science:E] Running Loop=1
2018-09-22T22:21:40.291Z,1537654900.291 [trackPatch:Science:F] Running Loop=1
2018-09-22T22:21:40.291Z,1537654900.291 [trackPatch:Science:G] Running Loop=1
2018-09-22T22:21:40.291Z,1537654900.291 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-22T22:21:40.292Z,1537654900.292 [trackPatch:Science:PeakDetectChl] Running Loop=1
2018-09-22T22:21:40.292Z,1537654900.292 [trackPatch:Science:PeakDetectChl](DEBUG): Aggregate::initialize trackPatch:Science:PeakDetectChl
2018-09-22T22:21:40.292Z,1537654900.292 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2018-09-22T22:21:40.292Z,1537654900.292 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-22T22:21:40.293Z,1537654900.293 [trackPatch:Science:HighestChlPeakReport] Running Loop=1
2018-09-22T22:21:40.293Z,1537654900.293 [trackPatch:Science:HighestChlPeakReport](DEBUG): Aggregate::initialize trackPatch:Science:HighestChlPeakReport
2018-09-22T22:21:40.294Z,1537654900.294 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2018-09-22T22:21:40.294Z,1537654900.294 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2018-09-22T22:21:40.294Z,1537654900.294 [trackPatch:Science:PeakDetectNO3] Running Loop=1
2018-09-22T22:21:40.294Z,1537654900.294 [trackPatch:Science:PeakDetectNO3](DEBUG): Aggregate::initialize trackPatch:Science:PeakDetectNO3
2018-09-22T22:21:40.294Z,1537654900.294 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2018-09-22T22:21:40.295Z,1537654900.295 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-22T22:21:40.295Z,1537654900.295 [trackPatch:Science:PeakDetectOil] Running Loop=1
2018-09-22T22:21:40.296Z,1537654900.296 [trackPatch:Science:PeakDetectOil](DEBUG): Aggregate::initialize trackPatch:Science:PeakDetectOil
2018-09-22T22:21:40.296Z,1537654900.296 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2018-09-22T22:21:40.296Z,1537654900.296 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-22T22:21:40.297Z,1537654900.297 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-22T22:21:40.297Z,1537654900.297 [trackPatch:K.SetSpeed](DEBUG): Initialize.
2018-09-22T22:21:40.297Z,1537654900.297 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-22T22:21:40.297Z,1537654900.297 [trackPatch:L.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-22T22:21:40.297Z,1537654900.297 [trackPatch:M.YoYo] Running Loop=1
2018-09-22T22:21:40.298Z,1537654900.298 [trackPatch:M.YoYo](DEBUG): Initialize YoYoComponent.
2018-09-22T22:21:40.298Z,1537654900.298 [trackPatch:SurfaceCommsSplit] Running Loop=1
2018-09-22T22:21:40.298Z,1537654900.298 [trackPatch:SurfaceCommsSplit](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit
2018-09-22T22:21:40.298Z,1537654900.298 [trackPatch:SurfaceCommsSplit:A.GoToSurface] Running Loop=1
2018-09-22T22:21:40.298Z,1537654900.298 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-22T22:21:40.299Z,1537654900.299 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-22T22:21:40.299Z,1537654900.299 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-22T22:21:40.299Z,1537654900.299 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-22T22:21:40.300Z,1537654900.300 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-22T22:21:40.300Z,1537654900.300 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-22T22:21:40.301Z,1537654900.301 [trackPatch:M.YoYo] Running Loop=1
2018-09-22T22:21:40.302Z,1537654900.302 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-22T22:21:40.304Z,1537654900.304 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-22T22:21:40.305Z,1537654900.305 [trackPatch:Science] Running Loop=1
2018-09-22T22:21:40.336Z,1537654900.336 [trackPatch:Science:PeakDetectOil] Stopped
2018-09-22T22:21:40.336Z,1537654900.336 [trackPatch:Science:PeakDetectOil](DEBUG): Aggregate::uninitialize trackPatch:Science:PeakDetectOil
2018-09-22T22:21:40.336Z,1537654900.336 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2018-09-22T22:21:40.336Z,1537654900.336 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-22T22:21:40.336Z,1537654900.336 [trackPatch:Science:PeakDetectNO3] Stopped
2018-09-22T22:21:40.337Z,1537654900.337 [trackPatch:Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize trackPatch:Science:PeakDetectNO3
2018-09-22T22:21:40.337Z,1537654900.337 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2018-09-22T22:21:40.337Z,1537654900.337 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-22T22:21:40.337Z,1537654900.337 [trackPatch:Science:HighestChlPeakReport] Stopped
2018-09-22T22:21:40.337Z,1537654900.337 [trackPatch:Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize trackPatch:Science:HighestChlPeakReport
2018-09-22T22:21:40.337Z,1537654900.337 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2018-09-22T22:21:40.337Z,1537654900.337 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-22T22:21:40.337Z,1537654900.337 [trackPatch:Science:PeakDetectChl] Running Loop=1
2018-09-22T22:21:40.338Z,1537654900.338 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-22T22:21:40.339Z,1537654900.339 [trackPatch:Science:Read_Oil](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-22T22:21:40.340Z,1537654900.340 [trackPatch:Science:G] Running Loop=1
2018-09-22T22:21:40.340Z,1537654900.340 [trackPatch:Science:G](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-22T22:21:40.341Z,1537654900.341 [trackPatch:Science:F] Stopped
2018-09-22T22:21:40.341Z,1537654900.341 [trackPatch:Science:E] Stopped
2018-09-22T22:21:40.341Z,1537654900.341 [trackPatch:Science:D] Stopped
2018-09-22T22:21:40.341Z,1537654900.341 [trackPatch:Science:C] Stopped
2018-09-22T22:21:40.341Z,1537654900.341 [trackPatch:Science:B] Stopped
2018-09-22T22:21:40.341Z,1537654900.341 [trackPatch:Science:A] Stopped
2018-09-22T22:21:40.341Z,1537654900.341 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-22T22:21:40.343Z,1537654900.343 [trackPatch:H.Pitch] Running Loop=1
2018-09-22T22:21:40.344Z,1537654900.344 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-22T22:21:40.357Z,1537654900.357 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-22T22:21:40.362Z,1537654900.362 [trackPatch:SurfaceCommsSplit:B] Running Loop=1
2018-09-22T22:21:40.362Z,1537654900.362 [trackPatch:SurfaceCommsSplit:B](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit:B
2018-09-22T22:21:40.363Z,1537654900.363 [trackPatch:SurfaceCommsSplit:B:A] Running Loop=1
2018-09-22T22:21:40.363Z,1537654900.363 [trackPatch:B.DepthEnvelope] Running Loop=1
2018-09-22T22:21:40.364Z,1537654900.364 [trackPatch:A.AltitudeEnvelope] Running Loop=1
2018-09-22T22:21:40.387Z,1537654900.387 [CBIT](ERROR): Communications Fault in component: RDI_Pathfinder
2018-09-22T22:21:40.509Z,1537654900.509 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-22T22:21:40.509Z,1537654900.509 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-22T22:21:40.557Z,1537654900.557 [RDI_Pathfinder](INFO): Powering down
2018-09-22T22:21:40.584Z,1537654900.584 [trackPatch:SurfaceCommsSplit:B:A](INFO): ##UnpackSplit##
2018-09-22T22:21:40.589Z,1537654900.589 [trackPatch:SurfaceCommsSplit:B:A] Stopped
2018-09-22T22:21:40.589Z,1537654900.589 [trackPatch:SurfaceCommsSplit:B](INFO): Completed trackPatch:SurfaceCommsSplit:B
2018-09-22T22:21:40.589Z,1537654900.589 [trackPatch:SurfaceCommsSplit:B] Stopped
2018-09-22T22:21:40.589Z,1537654900.589 [trackPatch:SurfaceCommsSplit:B](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit:B
2018-09-22T22:21:40.589Z,1537654900.589 [trackPatch:SurfaceCommsSplit:C] Running Loop=1
2018-09-22T22:21:40.590Z,1537654900.590 [trackPatch:SurfaceCommsSplit:C](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit:C
2018-09-22T22:21:40.590Z,1537654900.590 [trackPatch:SurfaceCommsSplit:C:A] Running Loop=1
2018-09-22T22:21:40.869Z,1537654900.869 [trackPatch:M.YoYo] Preempted
2018-09-22T22:21:40.869Z,1537654900.869 [trackPatch:L.DepthEnvelope] Preempted
2018-09-22T22:21:40.869Z,1537654900.869 [trackPatch:K.SetSpeed] Preempted
2018-09-22T22:21:40.869Z,1537654900.869 [trackPatch:Science] Preempted
2018-09-22T22:21:40.869Z,1537654900.869 [trackPatch:Science:G] Preempted
2018-09-22T22:21:40.869Z,1537654900.869 [trackPatch:Science:Read_Oil] Preempted
2018-09-22T22:21:40.869Z,1537654900.869 [trackPatch:Science:PeakDetectChl] Preempted
2018-09-22T22:21:40.869Z,1537654900.869 [trackPatch:I.Buoyancy] Preempted
2018-09-22T22:21:40.869Z,1537654900.869 [trackPatch:H.Pitch] Preempted
2018-09-22T22:21:40.870Z,1537654900.870 [trackPatch:G.WaterDepthEnvelope] Preempted
2018-09-22T22:21:40.870Z,1537654900.870 [trackPatch:F.OffshoreEnvelope] Preempted
2018-09-22T22:21:40.871Z,1537654900.871 [trackPatch:SurfaceCommsSplit:C:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-22T22:21:41.299Z,1537654901.299 [CBIT](INFO): Clearing failed state for component RDI_Pathfinder
2018-09-22T22:21:41.299Z,1537654901.299 [RDI_Pathfinder] No Fault, FailCount= 1
2018-09-22T22:21:42.685Z,1537654902.685 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-22T22:21:54.857Z,1537654914.857 [RDI_Pathfinder](ERROR): Failed to parse:Pathfinder
2018-09-22T22:23:30.423Z,1537655010.423 [NAL9602](INFO): GPS fix at 20180922T222319: (36.837749, -121.910096)
2018-09-22T22:23:30.474Z,1537655010.474 [trackPatch:SurfaceCommsSplit:C:A] Stopped
2018-09-22T22:23:30.474Z,1537655010.474 [trackPatch:SurfaceCommsSplit:C:B] Running Loop=1
2018-09-22T22:23:30.913Z,1537655010.913 [trackPatch:SurfaceCommsSplit:C:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-22T22:23:35.441Z,1537655015.441 [DataOverHttps](INFO): Sending 64 bytes from file Logs/20180922T190757/Courier0066.lzma
2018-09-22T22:23:36.197Z,1537655016.197 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0066.lzma.bak
2018-09-22T22:23:36.197Z,1537655016.197 [DataOverHttps](INFO): SBD MOMSN=8563255
2018-09-22T22:23:46.153Z,1537655026.153 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180922T190757/Courier0069.lzma
2018-09-22T22:23:47.349Z,1537655027.349 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0069.lzma.bak
2018-09-22T22:23:47.349Z,1537655027.349 [DataOverHttps](INFO): SBD MOMSN=8563258
2018-09-22T22:23:56.548Z,1537655036.548 [DataOverHttps](INFO): Sending 363 bytes from file Logs/20180922T190757/Express0067.lzma
2018-09-22T22:23:57.293Z,1537655037.293 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0067.lzma.bak
2018-09-22T22:23:57.293Z,1537655037.293 [DataOverHttps](INFO): SBD MOMSN=8563260
2018-09-22T22:24:06.602Z,1537655046.602 [NAL9602](INFO): Powering down
2018-09-22T22:24:06.778Z,1537655046.778 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180922T190757/Express0070.lzma
2018-09-22T22:24:07.560Z,1537655047.560 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0070.lzma.bak
2018-09-22T22:24:07.560Z,1537655047.560 [DataOverHttps](INFO): SBD MOMSN=8563274
2018-09-22T22:24:08.058Z,1537655048.058 [trackPatch:SurfaceCommsSplit:C:B] Stopped
2018-09-22T22:24:08.058Z,1537655048.058 [trackPatch:SurfaceCommsSplit:C:C] Running Loop=1
2018-09-22T22:24:08.398Z,1537655048.398 [trackPatch:SurfaceCommsSplit:C:C](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-22T22:24:11.548Z,1537655051.548 [NAL9602](INFO): Powering up
2018-09-22T22:24:22.490Z,1537655062.490 [NAL9602](INFO): NAL9602 initialized
2018-09-22T22:24:41.288Z,1537655081.288 [NAL9602](INFO): SBD MO Status=0, MOMSN=1159, MT Status=0, MTMSN=0
2018-09-22T22:24:41.288Z,1537655081.288 [NAL9602](INFO): No messages in MT queue
2018-09-22T22:28:05.582Z,1537655285.582 [NAL9602](INFO): GPS fix at 20180922T222754: (36.838324, -121.909775)
2018-09-22T22:28:05.653Z,1537655285.653 [trackPatch:SurfaceCommsSplit:C:C] Stopped
2018-09-22T22:28:05.653Z,1537655285.653 [trackPatch:SurfaceCommsSplit:C](INFO): Completed trackPatch:SurfaceCommsSplit:C
2018-09-22T22:28:05.653Z,1537655285.653 [trackPatch:SurfaceCommsSplit:C] Stopped
2018-09-22T22:28:05.653Z,1537655285.653 [trackPatch:SurfaceCommsSplit:C](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit:C
2018-09-22T22:28:05.654Z,1537655285.654 [trackPatch:SurfaceCommsSplit](INFO): Completed trackPatch:SurfaceCommsSplit
2018-09-22T22:28:05.654Z,1537655285.654 [trackPatch:SurfaceCommsSplit] Stopped
2018-09-22T22:28:05.655Z,1537655285.655 [trackPatch:SurfaceCommsSplit](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit
2018-09-22T22:28:05.655Z,1537655285.655 [trackPatch:SurfaceCommsSplit:A.GoToSurface] Stopped
2018-09-22T22:28:05.655Z,1537655285.655 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-22T22:28:05.655Z,1537655285.655 [trackPatch:PatchDetectHorizontal] Running Loop=1
2018-09-22T22:28:05.655Z,1537655285.655 [trackPatch:PatchDetectHorizontal](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal
2018-09-22T22:28:05.655Z,1537655285.655 [trackPatch:PatchDetectHorizontal:AssignPatchDetectOn] Running Loop=1
2018-09-22T22:28:06.042Z,1537655286.042 [trackPatch:PatchDetectHorizontal:AssignPatchDetectOn] Stopped
2018-09-22T22:28:06.042Z,1537655286.042 [trackPatch:PatchDetectHorizontal:C] Running Loop=1
2018-09-22T22:28:06.042Z,1537655286.042 [trackPatch:M.YoYo] Running Loop=1
2018-09-22T22:28:06.043Z,1537655286.043 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-22T22:28:06.044Z,1537655286.044 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-22T22:28:06.044Z,1537655286.044 [trackPatch:Science] Running Loop=1
2018-09-22T22:28:06.050Z,1537655286.050 [trackPatch:Science:PeakDetectChl] Running Loop=1
2018-09-22T22:28:06.051Z,1537655286.051 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-22T22:28:06.051Z,1537655286.051 [trackPatch:Science:G] Running Loop=1
2018-09-22T22:28:06.051Z,1537655286.051 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-22T22:28:06.052Z,1537655286.052 [trackPatch:H.Pitch] Running Loop=1
2018-09-22T22:28:06.052Z,1537655286.052 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-22T22:28:06.052Z,1537655286.052 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-22T22:28:06.238Z,1537655286.238 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-22T22:28:06.239Z,1537655286.239 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-22T22:28:06.419Z,1537655286.419 [trackPatch:PatchDetectHorizontal:C](IMPORTANT): Next: bearing for CrossLeg: -90.000000 arcdeg . WpMaxDistance = 1000.000000 m . Current lat, lon = 36.838324 arcdeg , -121.909775 arcdeg .
2018-09-22T22:28:06.420Z,1537655286.420 [trackPatch:PatchDetectHorizontal:C] Stopped
2018-09-22T22:28:06.420Z,1537655286.420 [trackPatch:PatchDetectHorizontal:CrossLeg] Running Loop=1
2018-09-22T22:28:06.420Z,1537655286.420 [trackPatch:PatchDetectHorizontal:CrossLeg](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal:CrossLeg
2018-09-22T22:28:06.420Z,1537655286.420 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint] Running Loop=1
2018-09-22T22:28:06.420Z,1537655286.420 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-22T22:28:06.421Z,1537655286.421 [trackPatch:PatchDetectHorizontal:PatchDetection] Running Loop=1
2018-09-22T22:28:06.421Z,1537655286.421 [trackPatch:PatchDetectHorizontal:PatchDetection](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal:PatchDetection
2018-09-22T22:28:06.422Z,1537655286.422 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal] Running Loop=1
2018-09-22T22:28:06.422Z,1537655286.422 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](INFO): Initialize.
2018-09-22T22:28:06.827Z,1537655286.827 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint] Stopped
2018-09-22T22:28:06.827Z,1537655286.827 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-22T22:28:06.827Z,1537655286.827 [trackPatch:PatchDetectHorizontal:CrossLeg:B] Running Loop=1
2018-09-22T22:28:06.827Z,1537655286.827 [trackPatch:PatchDetectHorizontal:CrossLeg:B](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal:CrossLeg:B
2018-09-22T22:28:07.250Z,1537655287.250 [trackPatch:SurfaceComms] Running Loop=1
2018-09-22T22:28:07.250Z,1537655287.250 [trackPatch:SurfaceComms](DEBUG): Aggregate::initialize trackPatch:SurfaceComms
2018-09-22T22:28:07.250Z,1537655287.250 [trackPatch:SurfaceComms:SurfaceComms] Running Loop=1
2018-09-22T22:28:07.250Z,1537655287.250 [trackPatch:SurfaceComms:SurfaceComms](DEBUG): Aggregate::initialize trackPatch:SurfaceComms:SurfaceComms
2018-09-22T22:28:07.250Z,1537655287.250 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface] Running Loop=1
2018-09-22T22:28:07.250Z,1537655287.250 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-22T22:28:07.251Z,1537655287.251 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-22T22:28:07.251Z,1537655287.251 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-22T22:28:07.252Z,1537655287.252 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-22T22:28:07.252Z,1537655287.252 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-22T22:28:07.252Z,1537655287.252 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-22T22:28:07.265Z,1537655287.265 [trackPatch:SurfaceComms:SurfaceComms:B] Running Loop=1
2018-09-22T22:28:07.265Z,1537655287.265 [trackPatch:SurfaceComms:SurfaceComms:B](DEBUG): Aggregate::initialize trackPatch:SurfaceComms:SurfaceComms:B
2018-09-22T22:28:07.265Z,1537655287.265 [trackPatch:SurfaceComms:SurfaceComms:B:A] Running Loop=1
2018-09-22T22:28:07.660Z,1537655287.660 [trackPatch:SurfaceComms:SurfaceComms:B] Stopped
2018-09-22T22:28:07.660Z,1537655287.660 [trackPatch:SurfaceComms:SurfaceComms:B](DEBUG): Aggregate::uninitialize trackPatch:SurfaceComms:SurfaceComms:B
2018-09-22T22:28:07.660Z,1537655287.660 [trackPatch:SurfaceComms:SurfaceComms:B:A] Stopped
2018-09-22T22:28:07.660Z,1537655287.660 [trackPatch:SurfaceComms:SurfaceComms:C] Running Loop=1
2018-09-22T22:28:07.660Z,1537655287.660 [trackPatch:SurfaceComms:SurfaceComms:C](DEBUG): Aggregate::initialize trackPatch:SurfaceComms:SurfaceComms:C
2018-09-22T22:28:07.660Z,1537655287.660 [trackPatch:SurfaceComms:SurfaceComms:C:A] Running Loop=1
2018-09-22T22:28:08.100Z,1537655288.100 [trackPatch:M.YoYo] Preempted
2018-09-22T22:28:08.100Z,1537655288.100 [trackPatch:L.DepthEnvelope] Preempted
2018-09-22T22:28:08.100Z,1537655288.100 [trackPatch:K.SetSpeed] Preempted
2018-09-22T22:28:08.100Z,1537655288.100 [trackPatch:Science] Preempted
2018-09-22T22:28:08.100Z,1537655288.100 [trackPatch:Science:G] Preempted
2018-09-22T22:28:08.100Z,1537655288.100 [trackPatch:Science:Read_Oil] Preempted
2018-09-22T22:28:08.101Z,1537655288.101 [trackPatch:Science:PeakDetectChl] Preempted
2018-09-22T22:28:08.109Z,1537655288.109 [trackPatch:I.Buoyancy] Preempted
2018-09-22T22:28:08.109Z,1537655288.109 [trackPatch:H.Pitch] Preempted
2018-09-22T22:28:08.109Z,1537655288.109 [trackPatch:G.WaterDepthEnvelope] Preempted
2018-09-22T22:28:08.109Z,1537655288.109 [trackPatch:F.OffshoreEnvelope] Preempted
2018-09-22T22:28:08.110Z,1537655288.110 [trackPatch:SurfaceComms:SurfaceComms:C:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-22T22:28:08.409Z,1537655288.409 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-22T22:28:12.579Z,1537655292.579 [NAL9602](INFO): GPS fix at 20180922T222758: (36.838330, -121.909763)
2018-09-22T22:28:12.738Z,1537655292.738 [trackPatch:SurfaceComms:SurfaceComms:C:A] Stopped
2018-09-22T22:28:12.739Z,1537655292.739 [trackPatch:SurfaceComms:SurfaceComms:C:B] Running Loop=1
2018-09-22T22:28:12.970Z,1537655292.970 [trackPatch:SurfaceComms:SurfaceComms:C:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-22T22:28:18.311Z,1537655298.311 [DataOverHttps](INFO): Sending 64 bytes from file Logs/20180922T190757/Courier0072.lzma
2018-09-22T22:28:19.105Z,1537655299.105 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0072.lzma.bak
2018-09-22T22:28:19.106Z,1537655299.106 [DataOverHttps](INFO): SBD MOMSN=8563278
2018-09-22T22:28:29.056Z,1537655309.056 [DataOverHttps](INFO): Sending 208 bytes from file Logs/20180922T190757/Express0073.lzma
2018-09-22T22:28:29.837Z,1537655309.837 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0073.lzma.bak
2018-09-22T22:28:29.837Z,1537655309.837 [DataOverHttps](INFO): SBD MOMSN=8563282
2018-09-22T22:28:30.361Z,1537655310.361 [trackPatch:SurfaceComms:SurfaceComms:C:B] Stopped
2018-09-22T22:28:30.361Z,1537655310.361 [trackPatch:SurfaceComms:SurfaceComms:C:C] Running Loop=1
2018-09-22T22:28:30.718Z,1537655310.718 [trackPatch:SurfaceComms:SurfaceComms:C:C](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-22T22:28:34.811Z,1537655314.811 [NAL9602](INFO): GPS fix at 20180922T222823: (36.838378, -121.909741)
2018-09-22T22:28:34.884Z,1537655314.884 [trackPatch:SurfaceComms:SurfaceComms:C:C] Stopped
2018-09-22T22:28:34.889Z,1537655314.889 [trackPatch:SurfaceComms:SurfaceComms:C](INFO): Completed trackPatch:SurfaceComms:SurfaceComms:C
2018-09-22T22:28:34.889Z,1537655314.889 [trackPatch:SurfaceComms:SurfaceComms:C] Stopped
2018-09-22T22:28:34.889Z,1537655314.889 [trackPatch:SurfaceComms:SurfaceComms:C](DEBUG): Aggregate::uninitialize trackPatch:SurfaceComms:SurfaceComms:C
2018-09-22T22:28:34.890Z,1537655314.890 [trackPatch:SurfaceComms:SurfaceComms](INFO): Completed trackPatch:SurfaceComms:SurfaceComms
2018-09-22T22:28:34.890Z,1537655314.890 [trackPatch:SurfaceComms:SurfaceComms] Stopped
2018-09-22T22:28:34.890Z,1537655314.890 [trackPatch:SurfaceComms:SurfaceComms](DEBUG): Aggregate::uninitialize trackPatch:SurfaceComms:SurfaceComms
2018-09-22T22:28:34.890Z,1537655314.890 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface] Stopped
2018-09-22T22:28:34.891Z,1537655314.891 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-22T22:28:34.891Z,1537655314.891 [trackPatch:SurfaceComms](INFO): Completed trackPatch:SurfaceComms
2018-09-22T22:28:34.891Z,1537655314.891 [trackPatch:SurfaceComms] Stopped
2018-09-22T22:28:34.891Z,1537655314.891 [trackPatch:SurfaceComms](DEBUG): Aggregate::uninitialize trackPatch:SurfaceComms
2018-09-22T22:28:35.254Z,1537655315.254 [trackPatch:PatchDetectHorizontal:CrossLeg:B](INFO): Completed trackPatch:PatchDetectHorizontal:CrossLeg:B
2018-09-22T22:28:35.254Z,1537655315.254 [trackPatch:PatchDetectHorizontal:CrossLeg:B] Stopped
2018-09-22T22:28:35.254Z,1537655315.254 [trackPatch:PatchDetectHorizontal:CrossLeg:B](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal:CrossLeg:B
2018-09-22T22:28:35.255Z,1537655315.255 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint] Running Loop=1
2018-09-22T22:28:35.255Z,1537655315.255 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-22T22:28:35.256Z,1537655315.256 [trackPatch:M.YoYo] Running Loop=1
2018-09-22T22:28:35.256Z,1537655315.256 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-22T22:28:35.262Z,1537655315.262 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-22T22:28:35.262Z,1537655315.262 [trackPatch:Science] Running Loop=1
2018-09-22T22:28:35.264Z,1537655315.264 [trackPatch:Science:PeakDetectChl] Running Loop=1
2018-09-22T22:28:35.264Z,1537655315.264 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-22T22:28:35.264Z,1537655315.264 [trackPatch:Science:G] Running Loop=1
2018-09-22T22:28:35.265Z,1537655315.265 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-22T22:28:35.269Z,1537655315.269 [trackPatch:H.Pitch] Running Loop=1
2018-09-22T22:28:35.270Z,1537655315.270 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-22T22:28:35.270Z,1537655315.270 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-22T22:28:35.492Z,1537655315.492 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-22T22:28:35.492Z,1537655315.492 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-22T22:29:06.838Z,1537655346.838 [Radio_Surface](INFO): Powering down
2018-09-22T22:29:06.884Z,1537655346.884 [NAL9602](INFO): Powering down
2018-09-22T22:29:11.731Z,1537655351.731 [RDI_Pathfinder](ERROR): only read 1 of 1 data item for altitude
2018-09-22T22:29:11.731Z,1537655351.731 [RDI_Pathfinder](ERROR): Failed to parse:
:HM,G0fff,*14.107,*-0.144,*0.000
2018-09-22T22:29:54.930Z,1537655394.930 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-22T22:29:54.930Z,1537655394.930 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092215352865,31,   0.0,1448.9,  0
2018-09-22T22:30:00.499Z,1537655400.499 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T22:30:32.297Z,1537655432.297 [CBIT](IMPORTANT): Beginning ground fault scan
2018-09-22T22:30:43.161Z,1537655443.161 [CBIT](IMPORTANT): No ground fault detected
mA:
CHAN A0 (Batt): -0.010171
CHAN A1 (24V): -0.024656
CHAN A2 (12V): -0.007483
CHAN A3 (5V): -0.001954
CHAN B0 (3.3V): 0.000179
CHAN B1 (3.15aV): 0.000167
CHAN B2 (3.15bV): 0.000172
CHAN B3 (GND): 0.002353
OPEN: 0.004100
Full Scale Calc: 4.765 mA, -1.589 mA
2018-09-22T22:31:00.552Z,1537655460.552 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T22:31:00.980Z,1537655460.980 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-22T22:31:00.981Z,1537655460.981 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,180922153.0, -0.1,   0.0,1448.9,  0
2018-09-22T22:31:20.989Z,1537655480.989 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-32768,V
2018-09-22T22:31:34.943Z,1537655494.943 [DataOverHttps](INFO): setting unavailable, lastComms_.elapsed()=180.142502
2018-09-22T22:32:19.911Z,1537655539.911 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-22T22:32:19.911Z,1537655539.911 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092215375365,35.0, -0.1,   0.0,10
2018-09-22T22:32:29.966Z,1537655549.966 [BPC1](INFO): Calculating totals. Valid battery stick count: 56. Valid reserve battery stick count: 6.
2018-09-22T22:33:00.696Z,1537655580.696 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T22:33:29.925Z,1537655609.925 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-22T22:33:29.925Z,1537655609.925 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092215390365,35.0, 0.0,1448.9,  0
2018-09-22T22:33:49.918Z,1537655629.918 [RDI_Pathfinder](ERROR): only read 1 of 5 data items
2018-09-22T22:33:49.918Z,1537655629.918 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768-32768,-32768,V
2018-09-22T22:33:55.926Z,1537655635.926 [RDI_Pathfinder](ERROR): Failed to parse:
:B,-32768,-32768,-32768,V
2018-09-22T22:34:01.088Z,1537655641.088 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T22:34:38.738Z,1537655678.738 [RDI_Pathfinder](ERROR): Failed to parse:
0e8d,0ffe, 14.120, -0.144
2018-09-22T22:34:47.548Z,1537655687.548 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for altitude
2018-09-22T22:34:47.548Z,1537655687.548 [RDI_Pathfinder](ERROR): Failed to parse:
:BD,        +  ,        +0.00,   0.00,772.97
2018-09-22T22:35:01.488Z,1537655701.488 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T22:35:35.547Z,1537655735.547 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for altitude
2018-09-22T22:35:35.547Z,1537655735.547 [RDI_Pathfinder](ERROR): Failed to parse:
:BD,        +0.00,              +0.00,   0.00

2018-09-22T22:36:01.540Z,1537655761.540 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T22:37:01.540Z,1537655821.540 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T22:38:01.940Z,1537655881.940 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T22:38:08.787Z,1537655888.787 [WetLabsSeaOWL_UV_A](DEBUG): Error parsing data: SEAOWLA2K-019	3813	841	8087	8087	2706335

2018-09-22T22:38:09.621Z,1537655889.621 [RDI_Pathfinder](ERROR): only read 4 of 5 data items
2018-09-22T22:38:09.622Z,1537655889.622 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-3276800
2018-09-22T22:39:02.740Z,1537655942.740 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T22:40:02.740Z,1537656002.740 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T22:41:02.741Z,1537656062.741 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T22:41:03.168Z,1537656063.168 [RDI_Pathfinder](ERROR): Failed to parse:

2018-09-22T22:42:02.740Z,1537656122.740 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T22:43:02.749Z,1537656182.749 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T22:44:03.140Z,1537656243.140 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T22:45:03.140Z,1537656303.140 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T22:45:16.826Z,1537656316.826 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint] Stopped
2018-09-22T22:45:16.826Z,1537656316.826 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-22T22:45:16.826Z,1537656316.826 [trackPatch:PatchDetectHorizontal:CrossLeg:D] Running Loop=1
2018-09-22T22:45:17.208Z,1537656317.208 [trackPatch:PatchDetectHorizontal:CrossLeg:D](IMPORTANT): CrossPeakWp done. Lat, lon = 36.838341 arcdeg , -121.920463 arcdeg . Patch value is nan ug/l at lat = nan arcdeg , lon = nan arcdeg , dep = 4.391302 m , distance = 0.000000 m 
2018-09-22T22:45:17.209Z,1537656317.209 [trackPatch:PatchDetectHorizontal:CrossLeg:D] Stopped
2018-09-22T22:45:17.209Z,1537656317.209 [trackPatch:PatchDetectHorizontal:CrossLeg:AssignPatchDetectOffInCrossLeg] Running Loop=1
2018-09-22T22:45:17.608Z,1537656317.608 [trackPatch:PatchDetectHorizontal:CrossLeg:AssignPatchDetectOffInCrossLeg] Stopped
2018-09-22T22:45:17.608Z,1537656317.608 [trackPatch:PatchDetectHorizontal:CrossLeg:AssignWpDoneInCrossLeg] Running Loop=1
2018-09-22T22:45:18.001Z,1537656318.001 [trackPatch:PatchDetectHorizontal:CrossLeg] Stopped
2018-09-22T22:45:18.001Z,1537656318.001 [trackPatch:PatchDetectHorizontal:CrossLeg](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal:CrossLeg
2018-09-22T22:45:18.001Z,1537656318.001 [trackPatch:PatchDetectHorizontal:CrossLeg:AssignWpDoneInCrossLeg] Stopped
2018-09-22T22:45:18.002Z,1537656318.002 [trackPatch:PatchDetectHorizontal:AssignWpBearingForInLeg] Running Loop=1
2018-09-22T22:45:18.417Z,1537656318.417 [trackPatch:PatchDetectHorizontal:AssignWpBearingForInLeg] Stopped
2018-09-22T22:45:18.417Z,1537656318.417 [trackPatch:PatchDetectHorizontal:F] Running Loop=1
2018-09-22T22:45:18.815Z,1537656318.815 [trackPatch:PatchDetectHorizontal:F](IMPORTANT): Next: bearing for InLeg: 90.000000 arcdeg . Current lat, lon = 36.838342 arcdeg , -121.920480 arcdeg . Patch value is nan ug/l at lat = nan arcdeg , lon = nan arcdeg , dep = 4.689773 m , distance = 0.000000 m 
2018-09-22T22:45:18.816Z,1537656318.816 [trackPatch:PatchDetectHorizontal:F] Stopped
2018-09-22T22:45:18.816Z,1537656318.816 [trackPatch:PatchDetectHorizontal:InLegWp.Waypoint] Running Loop=1
2018-09-22T22:45:18.816Z,1537656318.816 [trackPatch:PatchDetectHorizontal:InLegWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-22T22:45:19.193Z,1537656319.193 [trackPatch:PatchDetectHorizontal:InLegWp.Waypoint] Stopped
2018-09-22T22:45:19.193Z,1537656319.193 [trackPatch:PatchDetectHorizontal:InLegWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-22T22:45:19.194Z,1537656319.194 [trackPatch:PatchDetectHorizontal:AssignWpBearingForOutLeg] Running Loop=1
2018-09-22T22:45:19.622Z,1537656319.622 [trackPatch:PatchDetectHorizontal:AssignWpBearingForOutLeg] Stopped
2018-09-22T22:45:19.622Z,1537656319.622 [trackPatch:PatchDetectHorizontal:I] Running Loop=1
2018-09-22T22:45:19.979Z,1537656319.979 [trackPatch:PatchDetectHorizontal:I](IMPORTANT): Next: bearing for OutLeg: 0.000000 arcdeg . WpMaxDistance = 1000.000000 m . Current lat, lon = 36.838343 arcdeg , -121.920493 arcdeg . Patch value is nan ug/l at lat = nan arcdeg , lon = nan arcdeg , dep = 4.924931 m , distance = 0.000000 m 
2018-09-22T22:45:19.980Z,1537656319.980 [trackPatch:PatchDetectHorizontal:I] Stopped
2018-09-22T22:45:19.980Z,1537656319.980 [trackPatch:PatchDetectHorizontal:J] Running Loop=1
2018-09-22T22:45:19.980Z,1537656319.980 [trackPatch:PatchDetectHorizontal:J](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal:J
2018-09-22T22:45:20.396Z,1537656320.396 [trackPatch:SurfaceCommsSplit] Running Loop=1
2018-09-22T22:45:20.396Z,1537656320.396 [trackPatch:SurfaceCommsSplit](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit
2018-09-22T22:45:20.396Z,1537656320.396 [trackPatch:SurfaceCommsSplit:A.GoToSurface] Running Loop=1
2018-09-22T22:45:20.396Z,1537656320.396 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-22T22:45:20.396Z,1537656320.396 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-22T22:45:20.397Z,1537656320.397 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-22T22:45:20.397Z,1537656320.397 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-22T22:45:20.398Z,1537656320.398 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-22T22:45:20.398Z,1537656320.398 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-22T22:45:44.195Z,1537656344.195 [trackPatch:SurfaceCommsSplit:B] Running Loop=1
2018-09-22T22:45:44.195Z,1537656344.195 [trackPatch:SurfaceCommsSplit:B](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit:B
2018-09-22T22:45:44.195Z,1537656344.195 [trackPatch:SurfaceCommsSplit:B:A] Running Loop=1
2018-09-22T22:45:44.511Z,1537656344.511 [Radio_Surface](INFO): Powering up
2018-09-22T22:45:44.603Z,1537656344.603 [trackPatch:SurfaceCommsSplit:B:A](INFO): ##UnpackSplit##
2018-09-22T22:45:44.603Z,1537656344.603 [trackPatch:SurfaceCommsSplit:B:A] Stopped
2018-09-22T22:45:44.603Z,1537656344.603 [trackPatch:SurfaceCommsSplit:B](INFO): Completed trackPatch:SurfaceCommsSplit:B
2018-09-22T22:45:44.603Z,1537656344.603 [trackPatch:SurfaceCommsSplit:B] Stopped
2018-09-22T22:45:44.603Z,1537656344.603 [trackPatch:SurfaceCommsSplit:B](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit:B
2018-09-22T22:45:44.604Z,1537656344.604 [trackPatch:SurfaceCommsSplit:C] Running Loop=1
2018-09-22T22:45:44.604Z,1537656344.604 [trackPatch:SurfaceCommsSplit:C](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit:C
2018-09-22T22:45:44.604Z,1537656344.604 [trackPatch:SurfaceCommsSplit:C:A] Running Loop=1
2018-09-22T22:45:44.961Z,1537656344.961 [trackPatch:M.YoYo] Preempted
2018-09-22T22:45:44.961Z,1537656344.961 [trackPatch:L.DepthEnvelope] Preempted
2018-09-22T22:45:44.961Z,1537656344.961 [trackPatch:K.SetSpeed] Preempted
2018-09-22T22:45:44.961Z,1537656344.961 [trackPatch:Science] Preempted
2018-09-22T22:45:44.961Z,1537656344.961 [trackPatch:Science:G] Preempted
2018-09-22T22:45:44.961Z,1537656344.961 [trackPatch:Science:Read_Oil] Preempted
2018-09-22T22:45:44.961Z,1537656344.961 [trackPatch:Science:PeakDetectChl] Preempted
2018-09-22T22:45:44.961Z,1537656344.961 [trackPatch:I.Buoyancy] Preempted
2018-09-22T22:45:44.961Z,1537656344.961 [trackPatch:H.Pitch] Preempted
2018-09-22T22:45:44.961Z,1537656344.961 [trackPatch:G.WaterDepthEnvelope] Preempted
2018-09-22T22:45:44.961Z,1537656344.961 [trackPatch:F.OffshoreEnvelope] Preempted
2018-09-22T22:45:45.306Z,1537656345.306 [NAL9602](INFO): Powering up
2018-09-22T22:45:45.349Z,1537656345.349 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-22T22:45:54.615Z,1537656354.615 [BuoyancyServo](ERROR): getPosition uart error serial timeout
2018-09-22T22:45:54.615Z,1537656354.615 [BuoyancyServo](FAULT): Buoyancy getPosition uart error.serial timeout
2018-09-22T22:45:54.615Z,1537656354.615 [BuoyancyServo] Communications Fault, FailCount= 1
2018-09-22T22:45:54.615Z,1537656354.615 [BuoyancyServo](ERROR): Communications Fault
2018-09-22T22:45:54.745Z,1537656354.745 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-09-22T22:45:54.851Z,1537656354.851 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-22T22:45:54.852Z,1537656354.852 [BuoyancyServo](INFO): Powering down
2018-09-22T22:45:56.366Z,1537656356.366 [NAL9602](INFO): NAL9602 initialized
2018-09-22T22:45:56.422Z,1537656356.422 [BuoyancyServo](FAULT): LCB fault:  Current Limiter Activated.
2018-09-22T22:45:56.422Z,1537656356.422 [BuoyancyServo] Hardware Fault, FailCount= 1
2018-09-22T22:45:56.422Z,1537656356.422 [BuoyancyServo](ERROR): Hardware Fault
2018-09-22T22:45:56.844Z,1537656356.844 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-22T22:45:56.844Z,1537656356.844 [BuoyancyServo] No Fault, FailCount= 1
2018-09-22T22:45:57.232Z,1537656357.232 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-22T22:45:57.354Z,1537656357.354 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-22T22:46:03.568Z,1537656363.568 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T22:46:58.776Z,1537656418.776 [NAL9602](INFO): SBD MO Status=2, MOMSN=1160, MT Status=2, MTMSN=0
2018-09-22T22:46:58.776Z,1537656418.776 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-22T22:47:03.964Z,1537656423.964 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T22:47:33.576Z,1537656453.576 [NAL9602](INFO): SBD MO Status=2, MOMSN=1160, MT Status=2, MTMSN=0
2018-09-22T22:47:33.576Z,1537656453.576 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-22T22:47:50.768Z,1537656470.768 [NAL9602](INFO): SBD MO Status=2, MOMSN=1160, MT Status=2, MTMSN=0
2018-09-22T22:47:50.768Z,1537656470.768 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-22T22:48:03.965Z,1537656483.965 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T22:48:17.568Z,1537656497.568 [NAL9602](INFO): SBD MO Status=2, MOMSN=1160, MT Status=2, MTMSN=0
2018-09-22T22:48:17.568Z,1537656497.568 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-22T22:48:27.579Z,1537656507.579 [NAL9602](INFO): SBD MO Status=0, MOMSN=1160, MT Status=0, MTMSN=0
2018-09-22T22:48:27.580Z,1537656507.580 [NAL9602](INFO): No messages in MT queue
2018-09-22T22:49:03.964Z,1537656543.964 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T22:50:04.764Z,1537656604.764 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T22:51:40.429Z,1537656700.429 [trackPatch](INFO): Timed out from 2018-09-22T22:21:40.3Z
2018-09-22T22:51:40.429Z,1537656700.429 [MissionManager](INFO): trackPatch is completed.
2018-09-22T22:51:40.429Z,1537656700.429 [MissionManager](INFO): Uninitializing Mission trackPatch
2018-09-22T22:51:40.430Z,1537656700.430 [trackPatch] Stopped
2018-09-22T22:51:40.430Z,1537656700.430 [trackPatch](DEBUG): Aggregate::uninitialize trackPatch
2018-09-22T22:51:40.430Z,1537656700.430 [trackPatch:A.AltitudeEnvelope] Stopped
2018-09-22T22:51:40.430Z,1537656700.430 [trackPatch:A.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-22T22:51:40.430Z,1537656700.430 [trackPatch:B.DepthEnvelope] Stopped
2018-09-22T22:51:40.430Z,1537656700.430 [trackPatch:B.DepthEnvelope](DEBUG): Uninitialize.
2018-09-22T22:51:40.430Z,1537656700.430 [trackPatch:SurfaceCommsSplit] Stopped
2018-09-22T22:51:40.430Z,1537656700.430 [trackPatch:SurfaceCommsSplit](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit
2018-09-22T22:51:40.430Z,1537656700.430 [trackPatch:SurfaceCommsSplit:A.GoToSurface] Stopped
2018-09-22T22:51:40.430Z,1537656700.430 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-22T22:51:40.431Z,1537656700.431 [trackPatch:SurfaceCommsSplit:C] Stopped
2018-09-22T22:51:40.431Z,1537656700.431 [trackPatch:SurfaceCommsSplit:C](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit:C
2018-09-22T22:51:40.431Z,1537656700.431 [trackPatch:SurfaceCommsSplit:C:A] Stopped
2018-09-22T22:51:40.431Z,1537656700.431 [trackPatch:F.OffshoreEnvelope] Stopped
2018-09-22T22:51:40.431Z,1537656700.431 [trackPatch:F.OffshoreEnvelope](DEBUG): Uninitialize OffshoreEnvelopeComponent.
2018-09-22T22:51:40.431Z,1537656700.431 [trackPatch:G.WaterDepthEnvelope] Stopped
2018-09-22T22:51:40.431Z,1537656700.431 [trackPatch:G.WaterDepthEnvelope](DEBUG): Uninitialize WaterDepthEnvelopeComponent.
2018-09-22T22:51:40.431Z,1537656700.431 [trackPatch:H.Pitch] Stopped
2018-09-22T22:51:40.431Z,1537656700.431 [trackPatch:I.Buoyancy] Stopped
2018-09-22T22:51:40.431Z,1537656700.431 [trackPatch:I.Buoyancy](DEBUG): Uninitialize Buoyancy Component.
2018-09-22T22:51:40.431Z,1537656700.431 [trackPatch:Science] Stopped
2018-09-22T22:51:40.432Z,1537656700.432 [trackPatch:Science](DEBUG): Aggregate::uninitialize trackPatch:Science
2018-09-22T22:51:40.432Z,1537656700.432 [trackPatch:Science:G] Stopped
2018-09-22T22:51:40.432Z,1537656700.432 [trackPatch:Science:Read_Oil] Stopped
2018-09-22T22:51:40.432Z,1537656700.432 [trackPatch:Science:PeakDetectChl] Stopped
2018-09-22T22:51:40.432Z,1537656700.432 [trackPatch:Science:PeakDetectChl](DEBUG): Aggregate::uninitialize trackPatch:Science:PeakDetectChl
2018-09-22T22:51:40.432Z,1537656700.432 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2018-09-22T22:51:40.432Z,1537656700.432 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-22T22:51:40.432Z,1537656700.432 [trackPatch:K.SetSpeed] Stopped
2018-09-22T22:51:40.432Z,1537656700.432 [trackPatch:K.SetSpeed](DEBUG): Uninitialize.
2018-09-22T22:51:40.432Z,1537656700.432 [trackPatch:L.DepthEnvelope] Stopped
2018-09-22T22:51:40.432Z,1537656700.432 [trackPatch:L.DepthEnvelope](DEBUG): Uninitialize.
2018-09-22T22:51:40.433Z,1537656700.433 [trackPatch:M.YoYo] Stopped
2018-09-22T22:51:40.433Z,1537656700.433 [trackPatch:M.YoYo](DEBUG): Uninitialize YoYoComponent.
2018-09-22T22:51:40.433Z,1537656700.433 [trackPatch:PatchDetectHorizontal] Stopped
2018-09-22T22:51:40.433Z,1537656700.433 [trackPatch:PatchDetectHorizontal](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal
2018-09-22T22:51:40.433Z,1537656700.433 [trackPatch:PatchDetectHorizontal:PatchDetection] Stopped
2018-09-22T22:51:40.433Z,1537656700.433 [trackPatch:PatchDetectHorizontal:PatchDetection](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal:PatchDetection
2018-09-22T22:51:40.433Z,1537656700.433 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal] Stopped
2018-09-22T22:51:40.433Z,1537656700.433 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-22T22:51:40.434Z,1537656700.434 [trackPatch:PatchDetectHorizontal:J] Stopped
2018-09-22T22:51:40.434Z,1537656700.434 [trackPatch:PatchDetectHorizontal:J](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal:J
2018-09-22T22:51:40.847Z,1537656700.847 [MissionManager](IMPORTANT): Started mission Default
2018-09-22T22:51:40.848Z,1537656700.848 [Default] Running Loop=1
2018-09-22T22:51:40.848Z,1537656700.848 [Default](DEBUG): Aggregate::initialize Default
2018-09-22T22:51:40.848Z,1537656700.848 [Default:B.GoToSurface] Running Loop=1
2018-09-22T22:51:40.848Z,1537656700.848 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-22T22:51:40.848Z,1537656700.848 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-22T22:51:40.853Z,1537656700.853 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-22T22:51:40.853Z,1537656700.853 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-22T22:51:40.854Z,1537656700.854 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-22T22:51:40.854Z,1537656700.854 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-22T22:51:40.855Z,1537656700.855 [Default:A.Wait] Running Loop=1
2018-09-22T22:51:40.855Z,1537656700.855 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-22T22:51:53.996Z,1537656713.996 [Default:A.Wait](INFO): Done Waiting.
2018-09-22T22:51:53.996Z,1537656713.996 [Default:A.Wait] Stopped
2018-09-22T22:51:53.996Z,1537656713.996 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-22T22:51:54.376Z,1537656714.376 [Default:CheckIn] Running Loop=1
2018-09-22T22:51:54.377Z,1537656714.377 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-22T22:51:54.377Z,1537656714.377 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-22T22:51:57.931Z,1537656717.931 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.002731
2018-09-22T22:53:05.128Z,1537656785.128 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T22:54:05.532Z,1537656845.532 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T22:54:57.929Z,1537656897.929 [DataOverHttps](INFO): setting unavailable, lastComms_.elapsed()=180.000717
2018-09-22T22:55:59.138Z,1537656959.138 [NAL9602](FAULT): GPS failed to acquire within timeout.
2018-09-22T22:55:59.138Z,1537656959.138 [NAL9602] Data Fault, FailCount= 1
2018-09-22T22:55:59.138Z,1537656959.138 [NAL9602](ERROR): Data Fault
2018-09-22T22:55:59.210Z,1537656959.210 [CBIT](ERROR): Data Fault in component: NAL9602
2018-09-22T22:55:59.541Z,1537656959.541 [NAL9602](INFO): Powering down
2018-09-22T22:56:00.386Z,1537656960.386 [CBIT](INFO): Clearing failed state for component NAL9602
2018-09-22T22:56:00.386Z,1537656960.386 [NAL9602] No Fault, FailCount= 1
2018-09-22T22:56:06.328Z,1537656966.328 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T22:56:29.551Z,1537656989.551 [NAL9602](INFO): Powering up NAL9602
2018-09-22T22:56:40.735Z,1537657000.735 [NAL9602](INFO): NAL9602 initialized
2018-09-22T22:56:54.386Z,1537657014.386 [Default:CheckIn:Read_GPS](INFO): Timed out from 2018-09-22T22:51:54.4Z
2018-09-22T22:56:54.386Z,1537657014.386 [Default:CheckIn:Read_GPS] Stopped
2018-09-22T22:56:54.387Z,1537657014.387 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-22T22:57:06.479Z,1537657026.479 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T22:57:20.872Z,1537657040.872 [NAL9602](INFO): SBD MO Status=2, MOMSN=1161, MT Status=2, MTMSN=0
2018-09-22T22:57:20.872Z,1537657040.872 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-22T22:57:40.590Z,1537657060.590 [NAL9602](INFO): SBD MO Status=2, MOMSN=1161, MT Status=2, MTMSN=0
2018-09-22T22:57:40.590Z,1537657060.590 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-22T22:57:48.797Z,1537657068.797 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-32768,V
2018-09-22T22:57:57.952Z,1537657077.952 [NAL9602](INFO): SBD MO Status=1, MOMSN=1161, MT Status=0, MTMSN=0
2018-09-22T22:57:58.009Z,1537657078.009 [NAL9602](INFO): Sent 81 bytes from file Logs/20180922T190757/Courier0075.lzma
2018-09-22T22:57:58.009Z,1537657078.009 [NAL9602](INFO): Packets left to send: 0
2018-09-22T22:57:58.014Z,1537657078.014 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Courier0075.lzma.parts/0000.sbd
2018-09-22T22:57:58.014Z,1537657078.014 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Courier0075.lzma
2018-09-22T22:58:06.904Z,1537657086.904 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T22:58:08.912Z,1537657088.912 [NAL9602](INFO): SBD MO Status=1, MOMSN=1162, MT Status=0, MTMSN=0
2018-09-22T22:58:08.961Z,1537657088.961 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0076.lzma
2018-09-22T22:58:08.961Z,1537657088.961 [NAL9602](INFO): Packets left to send: 6
2018-09-22T22:58:08.963Z,1537657088.963 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0076.lzma.parts/0006.sbd
2018-09-22T22:58:14.670Z,1537657094.670 [RDI_Pathfinder](ERROR): Failed to parse:
0e8d,0ffe,*14.302,*-0.118,*0.000
2018-09-22T22:58:28.648Z,1537657108.648 [NAL9602](INFO): SBD MO Status=2, MOMSN=1163, MT Status=2, MTMSN=0
2018-09-22T22:58:28.648Z,1537657108.648 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-22T22:58:49.177Z,1537657129.177 [NAL9602](INFO): SBD MO Status=1, MOMSN=1163, MT Status=0, MTMSN=0
2018-09-22T22:58:49.225Z,1537657129.225 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0076.lzma
2018-09-22T22:58:49.226Z,1537657129.226 [NAL9602](INFO): Packets left to send: 5
2018-09-22T22:58:49.227Z,1537657129.227 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0076.lzma.parts/0005.sbd
2018-09-22T22:59:06.884Z,1537657146.884 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T22:59:57.687Z,1537657197.687 [NAL9602](FAULT): Verify xmit timeout failure.
2018-09-22T22:59:57.687Z,1537657197.687 [NAL9602] Data Fault, FailCount= 2
2018-09-22T22:59:57.687Z,1537657197.687 [NAL9602](ERROR): Data Fault
2018-09-22T22:59:57.786Z,1537657197.786 [CBIT](ERROR): Data Fault in component: NAL9602
2018-09-22T22:59:58.086Z,1537657198.086 [NAL9602](INFO): Powering down
2018-09-22T22:59:58.500Z,1537657198.500 [NAL9602](FAULT): LCB fault:  Software Overcurrent.
2018-09-22T22:59:58.500Z,1537657198.500 [NAL9602] Hardware Fault, FailCount= 2
2018-09-22T22:59:58.500Z,1537657198.500 [NAL9602](ERROR): Hardware Fault
2018-09-22T22:59:58.946Z,1537657198.946 [CBIT](INFO): Clearing failed state for component NAL9602
2018-09-22T22:59:58.946Z,1537657198.946 [NAL9602] No Fault, FailCount= 2
2018-09-22T23:00:06.884Z,1537657206.884 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:00:28.090Z,1537657228.090 [NAL9602](INFO): Powering up NAL9602
2018-09-22T23:00:41.683Z,1537657241.683 [NAL9602](INFO): NAL9602 initialized
2018-09-22T23:00:42.987Z,1537657242.987 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.002722
2018-09-22T23:00:47.889Z,1537657247.889 [DataOverHttps](INFO): Sending 2144 bytes from file Logs/20180922T190757/Express0076.lzma
2018-09-22T23:00:49.070Z,1537657249.070 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0076.lzma.bak
2018-09-22T23:00:49.070Z,1537657249.070 [DataOverHttps](INFO): SBD MOMSN=8563397
2018-09-22T23:00:49.608Z,1537657249.608 [Default:CheckIn:Read_Iridium] Stopped
2018-09-22T23:00:49.608Z,1537657249.608 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-22T23:00:49.608Z,1537657249.608 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-22T23:00:57.598Z,1537657257.598 [NAL9602](INFO): SBD MO Status=0, MOMSN=1164, MT Status=0, MTMSN=0
2018-09-22T23:01:28.394Z,1537657288.394 [NAL9602](INFO): Powering down
2018-09-22T23:04:54.785Z,1537657494.785 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-32768,V
2018-09-22T23:05:49.991Z,1537657549.991 [Default:CheckIn:C.Wait](INFO): Done Waiting.
2018-09-22T23:05:49.991Z,1537657549.991 [Default:CheckIn:C.Wait] Stopped
2018-09-22T23:05:49.992Z,1537657549.992 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-22T23:05:49.992Z,1537657549.992 [Default:CheckIn:D] Running Loop=1
2018-09-22T23:05:50.409Z,1537657550.409 [Default:CheckIn:D] Stopped
2018-09-22T23:05:50.409Z,1537657550.409 [Default:CheckIn:E] Running Loop=1
2018-09-22T23:05:50.804Z,1537657550.804 [Default:CheckIn:E](IMPORTANT): Default mission has been running for 14.159277 min 
2018-09-22T23:05:50.805Z,1537657550.805 [Default:CheckIn:E] Stopped
2018-09-22T23:05:50.805Z,1537657550.805 [Default:CheckIn](INFO): Completed Default:CheckIn
2018-09-22T23:05:50.805Z,1537657550.805 [Default:CheckIn] Stopped
2018-09-22T23:05:50.805Z,1537657550.805 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-22T23:05:50.805Z,1537657550.805 [Default:CheckIn](INFO): Running loop #2
2018-09-22T23:05:50.806Z,1537657550.806 [Default:CheckIn] Running Loop=2
2018-09-22T23:05:50.806Z,1537657550.806 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-22T23:05:50.806Z,1537657550.806 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-22T23:05:51.554Z,1537657551.554 [NAL9602](INFO): Powering up
2018-09-22T23:05:56.906Z,1537657556.906 [DataOverHttps](IMPORTANT): SBD MTMSN=20180922T230546
2018-09-22T23:06:01.928Z,1537657561.928 [DataOverHttps](INFO): Received command:sched asap "load Science/profile_station.xml;set profile_station.MissionTimeout 3 hour;set profile_station.NeedCommsTime 45 minute;set profile_station.Lat 36.8342 degree;set profile_station.Lon -121.898 degree" 4zk4z 1 2
2018-09-22T23:06:02.010Z,1537657562.010 [CommandLine](IMPORTANT): got command schedule asap "load Science/profile_station.xml;set profile_station.MissionTimeout 3 hour;set profile_station.NeedCommsTime 45 minute;set profile_station.Lat 36.8342 degree;set profile_station.Lon -121.898 degree" 4zk4z 1 2.000000
2018-09-22T23:06:02.011Z,1537657562.011 [CommandLine](IMPORTANT): Scheduling command #1 of 2 with id=4zk4z
2018-09-22T23:06:02.012Z,1537657562.012 [CommandLine](IMPORTANT): Scheduled #5 (#1 of 2 with id='4zk4z'): "load Science/profile_station.xml;set profile_station.MissionTimeout 3 hour;set profile_station.NeedCommsTime 45 minute;set profile_station.Lat 36.8342 degree;set profile_station.Lon -121.898 degree" ASAP
2018-09-22T23:06:02.726Z,1537657562.726 [DataOverHttps](IMPORTANT): SBD MTMSN=20180922T230552
2018-09-22T23:06:02.731Z,1537657562.731 [NAL9602](INFO): NAL9602 initialized
2018-09-22T23:06:08.212Z,1537657568.212 [DataOverHttps](INFO): Received command:sched asap "set profile_station.YoYoMaxDepth 20 meter;set profile_station.MaxDepth 30 meter;run " 4zk4z 2 2
2018-09-22T23:06:08.227Z,1537657568.227 [CommandLine](IMPORTANT): got command schedule asap "set profile_station.YoYoMaxDepth 20 meter;set profile_station.MaxDepth 30 meter;run " 4zk4z 2 2.000000
2018-09-22T23:06:08.227Z,1537657568.227 [CommandLine](IMPORTANT): Scheduling command #2 of 2 with id=4zk4z
2018-09-22T23:06:08.228Z,1537657568.228 [CommandLine](IMPORTANT): Scheduled #6 (#2 of 2 with id='4zk4z'): "set profile_station.YoYoMaxDepth 20 meter;set profile_station.MaxDepth 30 meter;run " ASAP
2018-09-22T23:06:08.352Z,1537657568.352 [CommandLine](IMPORTANT): got command load ./Missions/Science/profile_station.xml
2018-09-22T23:06:08.352Z,1537657568.352 [MissionManager](INFO): Loading Mission: ./Missions/Science/profile_station.xml
2018-09-22T23:06:08.517Z,1537657568.517 [MissionManager](INFO): DefineArg profile_station.MissionTimeout = 4.000000 h
2018-09-22T23:06:08.519Z,1537657568.519 [MissionManager](INFO): DefineArg profile_station.NeedCommsTime = 60.000000 min
2018-09-22T23:06:08.522Z,1537657568.522 [MissionManager](INFO): DefineArg profile_station.Lat = 36.806966 arcdeg
2018-09-22T23:06:08.524Z,1537657568.524 [MissionManager](INFO): DefineArg profile_station.Lon = -121.824326 arcdeg
2018-09-22T23:06:08.526Z,1537657568.526 [MissionManager](INFO): DefineArg profile_station.Radius = 300.000000 m
2018-09-22T23:06:08.528Z,1537657568.528 [MissionManager](INFO): DefineArg profile_station.YoYoMinDepth = 2.000000 m
2018-09-22T23:06:08.530Z,1537657568.530 [MissionManager](INFO): DefineArg profile_station.YoYoMaxDepth = 200.000000 m
2018-09-22T23:06:08.532Z,1537657568.532 [MissionManager](INFO): DefineArg profile_station.YoYoMinAltitude = 7.000000 m
2018-09-22T23:06:08.571Z,1537657568.571 [MissionManager](INFO): DefineArg profile_station.YoYoPitch = 20.000000 arcdeg
2018-09-22T23:06:08.578Z,1537657568.578 [MissionManager](INFO): DefineArg profile_station.Speed = 1.000000 m/s
2018-09-22T23:06:08.580Z,1537657568.580 [MissionManager](INFO): DefineArg profile_station.CircleMaxError = 100.000000 m
2018-09-22T23:06:08.582Z,1537657568.582 [MissionManager](INFO): DefineArg profile_station.CircleTurnToPort = 0 bool
2018-09-22T23:06:08.584Z,1537657568.584 [MissionManager](INFO): DefineArg profile_station.KwpHeading = 0.010000 rad/m
2018-09-22T23:06:08.586Z,1537657568.586 [MissionManager](INFO): DefineArg profile_station.MinAltitude = 5.000000 m
2018-09-22T23:06:08.589Z,1537657568.589 [MissionManager](INFO): DefineArg profile_station.MaxDepth = 205.000000 m
2018-09-22T23:06:08.627Z,1537657568.627 [MissionManager](INFO): DefineArg profile_station.MinOffshore = 2.000000 km
2018-09-22T23:06:08.628Z,1537657568.628 [MissionManager](INFO): Inserting Stack: Missions/Insert/Science.xml
2018-09-22T23:06:08.969Z,1537657568.969 [MissionManager](INFO): DefineArg profile_station:Science.SampleISUS = 0 bool
2018-09-22T23:06:08.972Z,1537657568.972 [MissionManager](INFO): DefineArg profile_station:Science.SampleISUSmaxPitch = 60.000000 arcdeg
2018-09-22T23:06:08.992Z,1537657568.992 [MissionManager](INFO): DefineArg profile_station:Science.SampleISUSminPitch = -60.000000 arcdeg
2018-09-22T23:06:09.023Z,1537657569.023 [MissionManager](INFO): DefineArg profile_station:Science.PeakDetectChlActive = 0 bool
2018-09-22T23:06:09.041Z,1537657569.041 [MissionManager](INFO): DefineArg profile_station:Science.HighestChlPeakReportActive = 0 bool
2018-09-22T23:06:09.066Z,1537657569.066 [MissionManager](INFO): DefineArg profile_station:Science.PatchTracking = 1 bool
2018-09-22T23:06:09.081Z,1537657569.081 [MissionManager](INFO): DefineArg profile_station:Science.FilterWidthHorizontal = 3.000000 count
2018-09-22T23:06:09.083Z,1537657569.083 [MissionManager](INFO): DefineArg profile_station:Science.NumProfilesSlidingwindow = 100.000000 count
2018-09-22T23:06:09.095Z,1537657569.095 [MissionManager](INFO): DefineArg profile_station:Science.OffPeakFractionHorizontal = 80.000000 %
2018-09-22T23:06:09.114Z,1537657569.114 [MissionManager](INFO): DefineArg profile_station:Science.PeakDetectNO3Active = 0 bool
2018-09-22T23:06:09.116Z,1537657569.116 [MissionManager](INFO): DefineArg profile_station:Science.PeakDetectOilActive = 0 bool
2018-09-22T23:06:09.126Z,1537657569.126 [MissionManager](INFO): DefineArg profile_station:Science.UpwardDerivativeOfTemperatureActive = 0 bool
2018-09-22T23:06:09.128Z,1537657569.128 [MissionManager](INFO): DefineArg profile_station:Science.EnabledAanderaaO2 = 0.000000 bool
2018-09-22T23:06:09.143Z,1537657569.143 [MissionManager](INFO): DefineArg profile_station:Science.EnabledNeilBrown = 0.000000 bool
2018-09-22T23:06:09.150Z,1537657569.150 [MissionManager](INFO): DefineArg profile_station:Science.EnabledSeabird = 0.000000 bool
2018-09-22T23:06:09.165Z,1537657569.165 [MissionManager](INFO): DefineArg profile_station:Science.EnabledTurbulence_NPS = 0.000000 bool
2018-09-22T23:06:09.167Z,1537657569.167 [MissionManager](INFO): DefineArg profile_station:Science.EnabledWetLabsBB2FL = 0.000000 bool
2018-09-22T23:06:09.175Z,1537657569.175 [MissionManager](INFO): DefineArg profile_station:Science.EnabledWetLabsSeaOWL_UV_A = 1.000000 bool
2018-09-22T23:06:09.189Z,1537657569.189 [MissionManager](INFO): DefineArg profile_station:Science.EnabledISUS = 0.000000 bool
2018-09-22T23:06:09.192Z,1537657569.192 [MissionManager](INFO): DefineArg profile_station:Science.LowPassWindowLength = 20.000000 count
2018-09-22T23:06:09.198Z,1537657569.198 [MissionManager](INFO): DefineArg profile_station:Science.PeakChlShallowBound = 10.000000 m
2018-09-22T23:06:09.213Z,1537657569.213 [MissionManager](INFO): DefineArg profile_station:Science.PeakChlDeepBound = 20.000000 m
2018-09-22T23:06:09.215Z,1537657569.215 [MissionManager](INFO): DefineOutput profile_station:Science.PeakChl = 0.000000 ug/l
2018-09-22T23:06:09.222Z,1537657569.222 [MissionManager](INFO): DefineOutput profile_station:Science.PeakChlDepth = 0.000000 m
2018-09-22T23:06:09.224Z,1537657569.224 [MissionManager](INFO): DefineOutput profile_station:Science.PeakChlTemperature = 0.000000 degC
2018-09-22T23:06:09.247Z,1537657569.247 [MissionManager](INFO): DefineOutput profile_station:Science.PeakChlLatitude = nan arcdeg
2018-09-22T23:06:09.269Z,1537657569.269 [MissionManager](INFO): DefineOutput profile_station:Science.PeakChlLongitude = nan arcdeg
2018-09-22T23:06:09.272Z,1537657569.272 [MissionManager](INFO): DefineOutput profile_station:Science.PeakNO3 = 0.000000 umol/l
2018-09-22T23:06:09.274Z,1537657569.274 [MissionManager](INFO): DefineOutput profile_station:Science.PeakNO3Depth = 0.000000 m
2018-09-22T23:06:09.276Z,1537657569.276 [MissionManager](INFO): DefineOutput profile_station:Science.PeakNO3Latitude = nan arcdeg
2018-09-22T23:06:09.293Z,1537657569.293 [MissionManager](INFO): DefineOutput profile_station:Science.PeakNO3Longitude = nan arcdeg
2018-09-22T23:06:09.296Z,1537657569.296 [MissionManager](INFO): DefineOutput profile_station:Science.PatchChl = 0.000000 m
2018-09-22T23:06:09.314Z,1537657569.314 [MissionManager](INFO): DefineOutput profile_station:Science.PatchChlDepth = 0.000000 m
2018-09-22T23:06:09.317Z,1537657569.317 [MissionManager](INFO): DefineOutput profile_station:Science.PatchChlLatitude = nan arcdeg
2018-09-22T23:06:09.319Z,1537657569.319 [MissionManager](INFO): DefineOutput profile_station:Science.PatchChlLongitude = nan arcdeg
2018-09-22T23:06:09.345Z,1537657569.345 [MissionManager](INFO): DefineOutput profile_station:Science.PatchChlDistance = nan m
2018-09-22T23:06:09.348Z,1537657569.348 [MissionManager](INFO): DefineOutput profile_station:Science.PeakOil = 0.000000 kg/m3
2018-09-22T23:06:09.369Z,1537657569.369 [MissionManager](INFO): DefineOutput profile_station:Science.PeakOilDepth = 0.000000 m
2018-09-22T23:06:09.371Z,1537657569.371 [MissionManager](INFO): DefineOutput profile_station:Science.PeakOilLatitude = nan arcdeg
2018-09-22T23:06:09.390Z,1537657569.390 [MissionManager](INFO): DefineOutput profile_station:Science.PeakOilLongitude = nan arcdeg
2018-09-22T23:06:09.494Z,1537657569.494 [profile_station:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-22T23:06:09.554Z,1537657569.554 [profile_station:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-22T23:06:09.613Z,1537657569.613 [profile_station:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-22T23:06:09.637Z,1537657569.637 [profile_station:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-22T23:06:09.661Z,1537657569.661 [MissionManager](INFO): RedefineArg profile_station:Science.SampleISUS = value:1 bool
2018-09-22T23:06:09.663Z,1537657569.663 [MissionManager](INFO): RedefineArg profile_station:Science.PeakDetectChlActive = value:1 bool
2018-09-22T23:06:09.663Z,1537657569.663 [MissionManager](INFO): Inserting Stack: Missions/Insert/NeedComms.xml
2018-09-22T23:06:09.759Z,1537657569.759 [MissionManager](INFO): DefineArg profile_station:NeedComms.DiveInterval = 3.000000 h
2018-09-22T23:06:09.778Z,1537657569.778 [MissionManager](INFO): DefineArg profile_station:NeedComms.WaitForPitchUp = 10.000000 min
2018-09-22T23:06:09.780Z,1537657569.780 [MissionManager](INFO): DefineArg profile_station:NeedComms.SurfacePitch = 20.000000 arcdeg
2018-09-22T23:06:09.782Z,1537657569.782 [MissionManager](INFO): DefineArg profile_station:NeedComms.SurfaceDepthRate = nan m/s
2018-09-22T23:06:09.784Z,1537657569.784 [MissionManager](INFO): DefineArg profile_station:NeedComms.SurfaceSpeed = 1.000000 m/s
2018-09-22T23:06:09.838Z,1537657569.838 [MissionManager](INFO): DefineArg profile_station:NeedComms.GPSTimeout = 7.000000 min
2018-09-22T23:06:09.840Z,1537657569.840 [MissionManager](INFO): DefineArg profile_station:NeedComms.CommsTimeout = 30.000000 min
2018-09-22T23:06:09.870Z,1537657569.870 [profile_station:NeedComms:B.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-22T23:06:09.914Z,1537657569.914 [MissionManager](INFO): Inserting Stack: Missions/Insert/StandardEnvelopes.xml
2018-09-22T23:06:09.983Z,1537657569.983 [MissionManager](INFO): DefineArg profile_station:StandardEnvelopes.MinAltitude = 5.000000 m
2018-09-22T23:06:09.993Z,1537657569.993 [MissionManager](INFO): DefineArg profile_station:StandardEnvelopes.MaxDepth = 200.000000 m
2018-09-22T23:06:09.995Z,1537657569.995 [MissionManager](INFO): DefineArg profile_station:StandardEnvelopes.MinOffshore = 2000.000000 m
2018-09-22T23:06:09.996Z,1537657569.996 [profile_station:StandardEnvelopes:A.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-22T23:06:10.018Z,1537657570.018 [profile_station:StandardEnvelopes:B.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-22T23:06:10.040Z,1537657570.040 [profile_station:StandardEnvelopes:C.OffshoreEnvelope](DEBUG): Construct OffshoreEnvelope.
2018-09-22T23:06:10.070Z,1537657570.070 [profile_station:I.Pitch](DEBUG): Construct.
2018-09-22T23:06:10.086Z,1537657570.086 [profile_station:J.Buoyancy](DEBUG): Construct Buoyancy.
2018-09-22T23:06:10.097Z,1537657570.097 [profile_station:K.SetSpeed](DEBUG): Construct.
2018-09-22T23:06:10.100Z,1537657570.100 [profile_station:L.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-22T23:06:10.120Z,1537657570.121 [profile_station:M.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-22T23:06:10.154Z,1537657570.154 [profile_station:N.YoYo](DEBUG): Construct YoYo.
2018-09-22T23:06:10.179Z,1537657570.179 [profile_station:CircleWrapper:B.Circle](DEBUG): Construct.
2018-09-22T23:06:10.344Z,1537657570.344 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Derivation="Tethys/Derivation"
       xmlns:Estimation="Tethys/Estimation"
       xmlns:Guidance="Tethys/Guidance"
       xmlns:Sensor="Tethys/Sensor"
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Derivation http://okeanids.mbari.org/tethys/Xml/Derivation.xsd
                           Tethys/Estimation http://okeanids.mbari.org/tethys/Xml/Estimation.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Sensor http://okeanids.mbari.org/tethys/Xml/Sensor.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="profile_station">

    <Description>
        This mission yoyos in a circle around a specified location.
    </Description>

<!-- Mission-wide settings -->

    <DefineArg Name="MissionTimeout"><Description>
        Maximum duration of mission
    </Description><Units:hour/><Value>4</Value></DefineArg>

    <DefineArg Name="NeedCommsTime"><Description>
        Elapsed time after previous surface communications when vehicle will
        begin to ascend for additional surface communications
    </Description><Units:minute/><Value>60</Value></DefineArg>

<!-- You probably need to change these. -->

    <DefineArg Name="Lat"><Description>
        The latitude of the center of the circle.
    </Description><Units:degree/><Value>36.806966</Value></DefineArg>

    <DefineArg Name="Lon"><Description>
        The longitude of the center of the circle.
    </Description><Units:degree/><Value>-121.824326</Value></DefineArg>

    <DefineArg Name="Radius"><Description>
        Radius to circle at
    </Description><Units:meter/><Value>300</Value></DefineArg>

<!-- You probably do not need to change these. -->

    <DefineArg Name="YoYoMinDepth"><Description>
        Minimum depth while performing the YoYo behavior.
    </Description><Units:meter/><Value>2</Value></DefineArg>

    <DefineArg Name="YoYoMaxDepth"><Description>
        Maximum depth while performing the YoYo behavior.
    </Description><Units:meter/><Value>200</Value></DefineArg>

    <DefineArg Name="YoYoMinAltitude"><Description>
        Minimum altitude while performing the YoYo behavior (for
        bottom-terminated YoYos).
    </Description><Units:meter/><Value>7</Value></DefineArg>

    <DefineArg Name="YoYoPitch"><Description>
        Pitch (plus and minus) for yo-yo behavior.
    </Description><Units:degree/><Value>20</Value></DefineArg>

    <DefineArg Name="Speed"><Description>
        Vehicle speed.
    </Description><Units:meter_per_second/><Value>1</Value></DefineArg>

<!-- You are even less likely to need to change these. -->

    <DefineArg Name="CircleMaxError"><Description>
        If this distance away from the circle, drive straight towards (or away
        from the center). Otherwise, try to reduce distance from the ideal
        circle.
    </Description><Units:meter/><Value>100</Value></DefineArg>

    <DefineArg Name="CircleTurnToPort"><Description>
        If true, vehicle turns to the left around the center point. If false,
        vehicle turns to the right.
    </Description><False/></DefineArg>

    <DefineArg Name="KwpHeading"><Description>
        Used to relax waypoint cross-track error constant that is adjusted for
        docking. (You can override this setting by passing an argument.)
    </Description><Units:radian_per_meter/><Value>0.010</Value></DefineArg>

    <DefineArg Name="MinAltitude"><Description>
        Minimum height above the sea floor for the entire mission.
    </Description><Units:meter/><Value>5</Value></DefineArg>

    <DefineArg Name="MaxDepth"><Description>
        Maximum depth for the entire mission.
    </Description><Units:meter/><Value>205</Value></DefineArg>

    <DefineArg Name="MinOffshore"><Description>
        Minimum offshore distance for the entire mission.
    </Description><Units:kilometer/><Value>2</Value></DefineArg>

<!-- Missions should almost always start with a timeout -->

    <Timeout Duration="MissionTimeout"/>

    <Insert Filename="Insert/Science.xml">
        <Description>
            Most missions will run the science sensors. If you don't place this
            aggregate above NeedComms, science instruments get turned off on the
            last upcast and while floating on the surface.
        </Description>
        <RedefineArg Name="SampleISUS"><True/></RedefineArg>
        <RedefineArg Name="PeakDetectChlActive"><True/></RedefineArg>
    </Insert>

<!-- Most missions should use the NeedComms aggregate. -->

    <Insert Filename="Insert/NeedComms.xml" Id="NeedComms"/>

    <Assign><Sequence/><Arg Name="NeedComms:DiveInterval"/><Arg Name="NeedCommsTime"/></Assign>

<!-- Missions should almost always start with standard safety envelopes; most missions should not expose the parameters of these envelopes. -->

    <Insert Filename="Insert/StandardEnvelopes.xml"/>

    <Assign><Sequence/><Arg Name="StandardEnvelopes:MinAltitude"/><Arg Name="MinAltitude"/></Assign>

    <Assign><Sequence/><Arg Name="StandardEnvelopes:MaxDepth"/><Arg Name="MaxDepth"/></Assign>

    <Assign><Sequence/><Arg Name="StandardEnvelopes:MinOffshore"/><Arg Name="MinOffshore"/></Assign>

<!-- Check for additional instructions first. -->

    <Call Id="StartingMission" RefId="NeedComms"/>

<!-- Many missions will keep mass position and buoyancy volume fixed at defaults. -->

    <Guidance:Pitch>
        <Parallel/>
        <Setting><Guidance:Pitch.massPosition/><Control:VerticalControl.massDefault/></Setting>
    </Guidance:Pitch>

    <Guidance:Buoyancy>
        <Parallel/>
        <Setting><Guidance:Buoyancy.position/><Control:VerticalControl.buoyancyNeutral/></Setting>
    </Guidance:Buoyancy>

    <Guidance:SetSpeed>
        <Parallel/>
        <Setting><Guidance:SetSpeed.speed/><Arg Name="Speed"/></Setting>
    </Guidance:SetSpeed>

    <Guidance:DepthEnvelope>
        <Description>
            Another depth envelope for the YoYo behavior. This envelope should
            fall within the limits of the standard safety envelopes in
            Insert/StandardEnvelopes.xml in order to avoid commanding high pitch
            angles for depth-terminated YoYos.
        </Description>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.minDepth/><Arg Name="YoYoMinDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="YoYoMaxDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.pitch/><Arg Name="YoYoPitch"/></Setting>
    </Guidance:DepthEnvelope>

    <Guidance:AltitudeEnvelope>
        <Description>
            Another altitude envelope for the YoYo behavior. This envelope
            should fall within the limits of the standard safety envelopes in
            Insert/StandardEnvelopes.xml in order to avoid commanding high pitch
            angles for bottom-terminated YoYos.
        </Description>
        <Parallel/>
        <Setting><Guidance:AltitudeEnvelope.minAltitude/><Arg Name="YoYoMinAltitude"/></Setting>
        <Setting><Guidance:AltitudeEnvelope.pitch/><Arg Name="YoYoPitch"/></Setting>
    </Guidance:AltitudeEnvelope>

    <Guidance:YoYo>
        <Parallel/>
        <Setting><Guidance:YoYo.pitch/><Arg Name="YoYoPitch"/></Setting>
    </Guidance:YoYo>

    <Aggregate Id="CircleWrapper">

        <Sequence Repeat="4096"/>

        <Assign><Parallel/><Control:HorizontalControl.kwpHeading/><Arg Name="KwpHeading"/></Assign>

        <Guidance:Circle>
            <Sequence/>
            <Setting><Guidance:Circle.latitude/><Arg Name="Lat"/></Setting>
            <Setting><Guidance:Circle.longitude/><Arg Name="Lon"/></Setting>
            <Setting><Guidance:Circle.radius/><Arg Name="Radius"/></Setting>
            <Setting><Guidance:Circle.maxError/><Arg Name="CircleMaxError"/></Setting>
            <Setting><Guidance:Circle.turnToPort/><Arg Name="CircleTurnToPort"/></Setting>
        </Guidance:Circle>

    </Aggregate>

</Mission>


2018-09-22T23:06:10.345Z,1537657570.345 [CommandLine](IMPORTANT): Loaded ./Missions/Science/profile_station.xml
2018-09-22T23:06:23.367Z,1537657583.367 [CommandLine](IMPORTANT): got command set profile_station.MissionTimeout 3.000000 hour
2018-09-22T23:06:23.368Z,1537657583.368 [CommandLine](IMPORTANT): got command set profile_station.NeedCommsTime 45.000000 minute
2018-09-22T23:06:23.368Z,1537657583.368 [CommandLine](IMPORTANT): got command set profile_station.Lat 36.834202 degree
2018-09-22T23:06:23.370Z,1537657583.370 [CommandLine](IMPORTANT): got command set profile_station.Lon -121.898003 degree
2018-09-22T23:06:30.049Z,1537657590.049 [CommandLine](IMPORTANT): got command set profile_station.YoYoMaxDepth 20.000000 meter
2018-09-22T23:06:30.050Z,1537657590.050 [CommandLine](IMPORTANT): got command set profile_station.MaxDepth 30.000000 meter
2018-09-22T23:06:30.051Z,1537657590.051 [CommandLine](IMPORTANT): got command run 
2018-09-22T23:06:30.053Z,1537657590.053 [CommandLine](IMPORTANT): Running 
2018-09-22T23:06:30.268Z,1537657590.268 [Default] Stopped
2018-09-22T23:06:30.268Z,1537657590.268 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-22T23:06:30.268Z,1537657590.268 [Default:B.GoToSurface] Stopped
2018-09-22T23:06:30.268Z,1537657590.268 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-22T23:06:30.268Z,1537657590.268 [Default:CheckIn] Stopped
2018-09-22T23:06:30.268Z,1537657590.268 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-22T23:06:30.268Z,1537657590.268 [Default:CheckIn:Read_GPS] Stopped
2018-09-22T23:06:30.268Z,1537657590.268 [MissionManager](IMPORTANT): Started mission profile_station
2018-09-22T23:06:30.269Z,1537657590.269 [profile_station] Running Loop=1
2018-09-22T23:06:30.269Z,1537657590.269 [profile_station](DEBUG): Aggregate::initialize profile_station
2018-09-22T23:06:30.269Z,1537657590.269 [profile_station:Science] Running Loop=1
2018-09-22T23:06:30.269Z,1537657590.269 [profile_station:Science](DEBUG): Aggregate::initialize profile_station:Science
2018-09-22T23:06:30.269Z,1537657590.269 [profile_station:Science:A] Running Loop=1
2018-09-22T23:06:30.270Z,1537657590.270 [profile_station:Science:B] Running Loop=1
2018-09-22T23:06:30.270Z,1537657590.270 [profile_station:Science:C] Running Loop=1
2018-09-22T23:06:30.270Z,1537657590.270 [profile_station:Science:D] Running Loop=1
2018-09-22T23:06:30.270Z,1537657590.270 [profile_station:Science:E] Running Loop=1
2018-09-22T23:06:30.270Z,1537657590.270 [profile_station:Science:F] Running Loop=1
2018-09-22T23:06:30.270Z,1537657590.270 [profile_station:Science:G] Running Loop=1
2018-09-22T23:06:30.270Z,1537657590.270 [profile_station:Science:Read_Oil] Running Loop=1
2018-09-22T23:06:30.270Z,1537657590.270 [profile_station:Science:PeakDetectChl] Running Loop=1
2018-09-22T23:06:30.270Z,1537657590.270 [profile_station:Science:PeakDetectChl](DEBUG): Aggregate::initialize profile_station:Science:PeakDetectChl
2018-09-22T23:06:30.270Z,1537657590.270 [profile_station:Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2018-09-22T23:06:30.270Z,1537657590.270 [profile_station:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-22T23:06:30.272Z,1537657590.272 [profile_station:Science:HighestChlPeakReport] Running Loop=1
2018-09-22T23:06:30.272Z,1537657590.272 [profile_station:Science:HighestChlPeakReport](DEBUG): Aggregate::initialize profile_station:Science:HighestChlPeakReport
2018-09-22T23:06:30.272Z,1537657590.272 [profile_station:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2018-09-22T23:06:30.272Z,1537657590.272 [profile_station:Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2018-09-22T23:06:30.272Z,1537657590.272 [profile_station:Science:PeakDetectNO3] Running Loop=1
2018-09-22T23:06:30.273Z,1537657590.273 [profile_station:Science:PeakDetectNO3](DEBUG): Aggregate::initialize profile_station:Science:PeakDetectNO3
2018-09-22T23:06:30.273Z,1537657590.273 [profile_station:Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2018-09-22T23:06:30.273Z,1537657590.273 [profile_station:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-22T23:06:30.274Z,1537657590.274 [profile_station:Science:PeakDetectOil] Running Loop=1
2018-09-22T23:06:30.274Z,1537657590.274 [profile_station:Science:PeakDetectOil](DEBUG): Aggregate::initialize profile_station:Science:PeakDetectOil
2018-09-22T23:06:30.274Z,1537657590.274 [profile_station:Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2018-09-22T23:06:30.274Z,1537657590.274 [profile_station:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-22T23:06:30.275Z,1537657590.275 [profile_station:StandardEnvelopes] Running Loop=1
2018-09-22T23:06:30.276Z,1537657590.276 [profile_station:StandardEnvelopes](DEBUG): Aggregate::initialize profile_station:StandardEnvelopes
2018-09-22T23:06:30.276Z,1537657590.276 [profile_station:StandardEnvelopes:A.AltitudeEnvelope] Running Loop=1
2018-09-22T23:06:30.276Z,1537657590.276 [profile_station:StandardEnvelopes:A.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-22T23:06:30.276Z,1537657590.276 [profile_station:StandardEnvelopes:B.DepthEnvelope] Running Loop=1
2018-09-22T23:06:30.276Z,1537657590.276 [profile_station:StandardEnvelopes:B.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-22T23:06:30.276Z,1537657590.276 [profile_station:StandardEnvelopes:C.OffshoreEnvelope] Running Loop=1
2018-09-22T23:06:30.276Z,1537657590.276 [profile_station:StandardEnvelopes:C.OffshoreEnvelope](DEBUG): Initialize OffshoreEnvelopeComponent.
2018-09-22T23:06:30.276Z,1537657590.276 [profile_station:I.Pitch] Running Loop=1
2018-09-22T23:06:30.277Z,1537657590.277 [profile_station:I.Pitch](DEBUG): Initialize.
2018-09-22T23:06:30.277Z,1537657590.277 [profile_station:J.Buoyancy] Running Loop=1
2018-09-22T23:06:30.277Z,1537657590.277 [profile_station:J.Buoyancy](DEBUG): Initialize Buoyancy Component.
2018-09-22T23:06:30.277Z,1537657590.277 [profile_station:K.SetSpeed] Running Loop=1
2018-09-22T23:06:30.277Z,1537657590.277 [profile_station:K.SetSpeed](DEBUG): Initialize.
2018-09-22T23:06:30.277Z,1537657590.277 [profile_station:L.DepthEnvelope] Running Loop=1
2018-09-22T23:06:30.277Z,1537657590.277 [profile_station:L.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-22T23:06:30.278Z,1537657590.278 [profile_station:M.AltitudeEnvelope] Running Loop=1
2018-09-22T23:06:30.278Z,1537657590.278 [profile_station:M.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-22T23:06:30.278Z,1537657590.278 [profile_station:N.YoYo] Running Loop=1
2018-09-22T23:06:30.278Z,1537657590.278 [profile_station:N.YoYo](DEBUG): Initialize YoYoComponent.
2018-09-22T23:06:30.278Z,1537657590.278 [profile_station:C] Running Loop=1
2018-09-22T23:06:30.279Z,1537657590.279 [profile_station:N.YoYo] Running Loop=1
2018-09-22T23:06:30.280Z,1537657590.280 [profile_station:M.AltitudeEnvelope] Running Loop=1
2018-09-22T23:06:30.281Z,1537657590.281 [profile_station:L.DepthEnvelope] Running Loop=1
2018-09-22T23:06:30.283Z,1537657590.283 [profile_station:K.SetSpeed] Running Loop=1
2018-09-22T23:06:30.284Z,1537657590.284 [profile_station:J.Buoyancy] Running Loop=1
2018-09-22T23:06:30.285Z,1537657590.285 [profile_station:I.Pitch] Running Loop=1
2018-09-22T23:06:30.286Z,1537657590.286 [profile_station:StandardEnvelopes] Running Loop=1
2018-09-22T23:06:30.286Z,1537657590.286 [profile_station:StandardEnvelopes:C.OffshoreEnvelope] Running Loop=1
2018-09-22T23:06:30.287Z,1537657590.287 [profile_station:StandardEnvelopes:B.DepthEnvelope] Running Loop=1
2018-09-22T23:06:30.305Z,1537657590.305 [profile_station:StandardEnvelopes:A.AltitudeEnvelope] Running Loop=1
2018-09-22T23:06:30.307Z,1537657590.307 [profile_station:C] Stopped
2018-09-22T23:06:30.307Z,1537657590.307 [profile_station:E] Running Loop=1
2018-09-22T23:06:30.307Z,1537657590.307 [profile_station:Science] Running Loop=1
2018-09-22T23:06:30.314Z,1537657590.314 [profile_station:Science:PeakDetectOil] Stopped
2018-09-22T23:06:30.314Z,1537657590.314 [profile_station:Science:PeakDetectOil](DEBUG): Aggregate::uninitialize profile_station:Science:PeakDetectOil
2018-09-22T23:06:30.315Z,1537657590.315 [profile_station:Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2018-09-22T23:06:30.315Z,1537657590.315 [profile_station:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-22T23:06:30.315Z,1537657590.315 [profile_station:Science:PeakDetectNO3] Stopped
2018-09-22T23:06:30.315Z,1537657590.315 [profile_station:Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize profile_station:Science:PeakDetectNO3
2018-09-22T23:06:30.315Z,1537657590.315 [profile_station:Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2018-09-22T23:06:30.315Z,1537657590.315 [profile_station:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-22T23:06:30.315Z,1537657590.315 [profile_station:Science:HighestChlPeakReport] Stopped
2018-09-22T23:06:30.315Z,1537657590.315 [profile_station:Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize profile_station:Science:HighestChlPeakReport
2018-09-22T23:06:30.315Z,1537657590.315 [profile_station:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2018-09-22T23:06:30.315Z,1537657590.315 [profile_station:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-22T23:06:30.315Z,1537657590.315 [profile_station:Science:PeakDetectChl] Running Loop=1
2018-09-22T23:06:30.316Z,1537657590.316 [profile_station:Science:Read_Oil] Running Loop=1
2018-09-22T23:06:30.321Z,1537657590.321 [profile_station:Science:Read_Oil](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-22T23:06:30.322Z,1537657590.322 [profile_station:Science:G] Running Loop=1
2018-09-22T23:06:30.323Z,1537657590.323 [profile_station:Science:G](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-22T23:06:30.324Z,1537657590.324 [profile_station:Science:F] Stopped
2018-09-22T23:06:30.324Z,1537657590.324 [profile_station:Science:E] Stopped
2018-09-22T23:06:30.324Z,1537657590.324 [profile_station:Science:D] Stopped
2018-09-22T23:06:30.324Z,1537657590.324 [profile_station:Science:C] Stopped
2018-09-22T23:06:30.324Z,1537657590.324 [profile_station:Science:B] Stopped
2018-09-22T23:06:30.324Z,1537657590.324 [profile_station:Science:A] Stopped
2018-09-22T23:06:30.401Z,1537657590.401 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-22T23:06:30.401Z,1537657590.401 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-22T23:06:30.673Z,1537657590.673 [ElevatorOffsetCalculator](INFO): Removing expired estimator for commanded vars: speed 1.00 m/s, pitch -20.00 deg, mass-position 0.00 mm.
2018-09-22T23:06:30.674Z,1537657590.674 [ElevatorOffsetCalculator](INFO): Removing expired estimator for commanded vars: speed 1.00 m/s, pitch 20.00 deg, mass-position 0.00 mm.
2018-09-22T23:06:30.686Z,1537657590.686 [profile_station:E] Stopped
2018-09-22T23:06:30.686Z,1537657590.686 [profile_station:F] Running Loop=1
2018-09-22T23:06:31.069Z,1537657591.069 [profile_station:F] Stopped
2018-09-22T23:06:31.069Z,1537657591.069 [profile_station:G] Running Loop=1
2018-09-22T23:06:31.501Z,1537657591.501 [profile_station:G] Stopped
2018-09-22T23:06:31.501Z,1537657591.501 [profile_station:StartingMission] Running Loop=1
2018-09-22T23:06:31.501Z,1537657591.501 [profile_station:StartingMission](DEBUG): Aggregate::initialize profile_station:StartingMission
2018-09-22T23:06:31.882Z,1537657591.882 [profile_station:NeedComms] Running Loop=1
2018-09-22T23:06:31.882Z,1537657591.882 [profile_station:NeedComms](DEBUG): Aggregate::initialize profile_station:NeedComms
2018-09-22T23:06:31.882Z,1537657591.882 [profile_station:NeedComms:B.GoToSurface] Running Loop=1
2018-09-22T23:06:31.882Z,1537657591.882 [profile_station:NeedComms:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-22T23:06:31.882Z,1537657591.882 [profile_station:NeedComms:B.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-22T23:06:31.883Z,1537657591.883 [profile_station:NeedComms:B.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-22T23:06:31.883Z,1537657591.883 [profile_station:NeedComms:B.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-22T23:06:31.884Z,1537657591.884 [profile_station:NeedComms:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-22T23:06:31.884Z,1537657591.884 [profile_station:NeedComms:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-22T23:06:31.884Z,1537657591.884 [profile_station:NeedComms:A] Running Loop=1
2018-09-22T23:06:31.891Z,1537657591.891 [profile_station:NeedComms:A](INFO): last time_fix was: 1537655303.000000 second since 1970/01/01T00:00:00Z 
2018-09-22T23:06:31.892Z,1537657591.892 [profile_station:NeedComms:A] Stopped
2018-09-22T23:06:32.289Z,1537657592.289 [profile_station:NeedComms:C] Running Loop=1
2018-09-22T23:06:32.751Z,1537657592.751 [profile_station:NeedComms:C](DEBUG): Initialize ReadDataComponent to sense time_fix
2018-09-22T23:06:38.696Z,1537657598.696 [NAL9602](INFO): SBD MO Status=2, MOMSN=1165, MT Status=2, MTMSN=0
2018-09-22T23:06:38.696Z,1537657598.696 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-22T23:07:07.664Z,1537657627.664 [NAL9602](INFO): SBD MO Status=2, MOMSN=1165, MT Status=2, MTMSN=0
2018-09-22T23:07:07.664Z,1537657627.664 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-22T23:07:34.200Z,1537657654.200 [NAL9602](INFO): SBD MO Status=2, MOMSN=1165, MT Status=2, MTMSN=0
2018-09-22T23:07:34.200Z,1537657654.200 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-22T23:07:45.392Z,1537657665.392 [NAL9602](INFO): SBD MO Status=0, MOMSN=1165, MT Status=0, MTMSN=0
2018-09-22T23:07:45.392Z,1537657665.392 [NAL9602](INFO): No messages in MT queue
2018-09-22T23:07:46.186Z,1537657666.186 [NAL9602](FAULT): GPS failed to acquire within timeout.
2018-09-22T23:07:46.187Z,1537657666.187 [NAL9602] Data Fault, FailCount= 1
2018-09-22T23:07:46.187Z,1537657666.187 [NAL9602](ERROR): Data Fault
2018-09-22T23:07:46.283Z,1537657666.283 [CBIT](ERROR): Data Fault in component: NAL9602
2018-09-22T23:07:46.586Z,1537657666.586 [NAL9602](INFO): Powering down
2018-09-22T23:07:47.504Z,1537657667.504 [CBIT](INFO): Clearing failed state for component NAL9602
2018-09-22T23:07:47.504Z,1537657667.504 [NAL9602] No Fault, FailCount= 1
2018-09-22T23:08:16.816Z,1537657696.816 [NAL9602](INFO): Powering up NAL9602
2018-09-22T23:08:27.998Z,1537657707.998 [NAL9602](INFO): NAL9602 initialized
2018-09-22T23:08:32.858Z,1537657712.858 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-22T23:08:32.859Z,1537657712.859 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092216140665,35.0, -0.    +0.00,        +0.00,        +0.00,   0.00,2797.65
2018-09-22T23:08:43.236Z,1537657723.236 [RDI_Pathfinder](ERROR): Failed to parse:
:HM,G,D,0e8d,0ffe,*14.295,*-0.127,*0.000
2018-09-22T23:11:53.212Z,1537657913.212 [RDI_Pathfinder](ERROR): only read 1 of 5 data items
2018-09-22T23:11:53.212Z,1537657913.212 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768-32768,-32768,V
2018-09-22T23:13:12.515Z,1537657992.515 [NAL9602](INFO): GPS fix at 20180922T231301: (36.841604, -121.921417)
2018-09-22T23:13:12.578Z,1537657992.578 [UniversalFixResidualReporter](INFO): Fix residual: 37.1 %DT, over the last 982.1 m. Residual distance 364.7 m at bearing 170.8 degrees. Fix at (36.8416, -121.9214) with 1099.2 m made good.
2018-09-22T23:13:12.593Z,1537657992.593 [profile_station:NeedComms:C] Stopped
2018-09-22T23:13:12.594Z,1537657992.594 [profile_station:NeedComms:D] Running Loop=1
2018-09-22T23:13:12.983Z,1537657992.983 [profile_station:NeedComms:D](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-22T23:13:19.707Z,1537657999.707 [DataOverHttps](INFO): Sending 74 bytes from file Logs/20180922T190757/Courier0078.lzma
2018-09-22T23:13:21.254Z,1537658001.254 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0078.lzma.bak
2018-09-22T23:13:21.254Z,1537658001.254 [DataOverHttps](INFO): SBD MOMSN=8563451
2018-09-22T23:13:30.885Z,1537658010.885 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180922T190757/Courier0081.lzma
2018-09-22T23:13:31.674Z,1537658011.674 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0081.lzma.bak
2018-09-22T23:13:31.674Z,1537658011.674 [DataOverHttps](INFO): SBD MOMSN=8563454
2018-09-22T23:13:42.158Z,1537658022.158 [DataOverHttps](INFO): Sending 1243 bytes from file Logs/20180922T190757/Express0079.lzma
2018-09-22T23:13:42.921Z,1537658022.921 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0079.lzma.bak
2018-09-22T23:13:42.921Z,1537658022.921 [DataOverHttps](INFO): SBD MOMSN=8563456
2018-09-22T23:13:47.030Z,1537658027.030 [NAL9602](INFO): Powering down
2018-09-22T23:13:52.603Z,1537658032.603 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180922T190757/Express0082.lzma
2018-09-22T23:13:53.393Z,1537658033.393 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0082.lzma.bak
2018-09-22T23:13:53.394Z,1537658033.394 [DataOverHttps](INFO): SBD MOMSN=8563481
2018-09-22T23:13:53.957Z,1537658033.957 [profile_station:NeedComms:D] Stopped
2018-09-22T23:13:53.957Z,1537658033.957 [profile_station:NeedComms:E] Running Loop=1
2018-09-22T23:13:54.249Z,1537658034.249 [profile_station:NeedComms:E](DEBUG): Initialize ReadDataComponent to sense time_fix
2018-09-22T23:13:57.472Z,1537658037.472 [NAL9602](INFO): Powering up
2018-09-22T23:14:08.391Z,1537658048.391 [NAL9602](INFO): NAL9602 initialized
2018-09-22T23:15:52.704Z,1537658152.704 [NAL9602](INFO): SBD MO Status=2, MOMSN=1166, MT Status=2, MTMSN=0
2018-09-22T23:15:52.704Z,1537658152.704 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-22T23:16:17.732Z,1537658177.732 [NAL9602](INFO): SBD MO Status=2, MOMSN=1166, MT Status=2, MTMSN=0
2018-09-22T23:16:17.732Z,1537658177.732 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-22T23:16:36.936Z,1537658196.936 [NAL9602](INFO): SBD MO Status=0, MOMSN=1166, MT Status=0, MTMSN=0
2018-09-22T23:16:36.936Z,1537658196.936 [NAL9602](INFO): No messages in MT queue
2018-09-22T23:17:11.644Z,1537658231.644 [NAL9602](INFO): GPS fix at 20180922T231700: (36.841885, -121.921429)
2018-09-22T23:17:11.726Z,1537658231.726 [profile_station:NeedComms:E] Stopped
2018-09-22T23:17:11.727Z,1537658231.727 [profile_station:NeedComms](INFO): Completed profile_station:NeedComms
2018-09-22T23:17:11.727Z,1537658231.727 [profile_station:NeedComms] Stopped
2018-09-22T23:17:11.727Z,1537658231.727 [profile_station:NeedComms](DEBUG): Aggregate::uninitialize profile_station:NeedComms
2018-09-22T23:17:11.727Z,1537658231.727 [profile_station:NeedComms:B.GoToSurface] Stopped
2018-09-22T23:17:11.727Z,1537658231.727 [profile_station:NeedComms:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-22T23:17:12.051Z,1537658232.051 [profile_station:StartingMission](INFO): Completed profile_station:StartingMission
2018-09-22T23:17:12.051Z,1537658232.051 [profile_station:StartingMission] Stopped
2018-09-22T23:17:12.051Z,1537658232.051 [profile_station:StartingMission](DEBUG): Aggregate::uninitialize profile_station:StartingMission
2018-09-22T23:17:12.051Z,1537658232.051 [profile_station:CircleWrapper] Running Loop=1
2018-09-22T23:17:12.051Z,1537658232.051 [profile_station:CircleWrapper](DEBUG): Aggregate::initialize profile_station:CircleWrapper
2018-09-22T23:17:12.051Z,1537658232.051 [profile_station:CircleWrapper:A] Running Loop=1
2018-09-22T23:17:12.051Z,1537658232.051 [profile_station:CircleWrapper:B.Circle] Running Loop=1
2018-09-22T23:17:12.052Z,1537658232.052 [profile_station:CircleWrapper:B.Circle](DEBUG): Initialize CircleComponent.
2018-09-22T23:17:12.462Z,1537658232.462 [profile_station:CircleWrapper:A] Running Loop=1
2018-09-22T23:17:41.122Z,1537658261.122 [Radio_Surface](INFO): Powering down
2018-09-22T23:17:44.002Z,1537658264.002 [NAL9602](INFO): Powering down
2018-09-22T23:17:44.065Z,1537658264.065 [RDI_Pathfinder](ERROR): Failed to parse:
0e8d,0fff,*14.194,*-0.137,*0.000
2018-09-22T23:17:44.438Z,1537658264.438 [ElevatorOffsetCalculator](INFO): New estimator for commanded vars: speed 1.00 m/s, pitch -20.00 deg, mass-position 0.00 mm (1 active estimators).
2018-09-22T23:17:51.660Z,1537658271.660 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-22T23:17:51.665Z,1537658271.665 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-3278,V
2018-09-22T23:18:25.196Z,1537658305.196 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:18:42.026Z,1537658322.026 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-22T23:18:42.026Z,1537658322.026 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092216241565,35.0, -0.1,   0.0,14
2018-09-22T23:18:50.426Z,1537658330.426 [ElevatorOffsetCalculator](INFO): New estimator for commanded vars: speed 1.00 m/s, pitch 20.00 deg, mass-position 0.00 mm (2 active estimators).
2018-09-22T23:19:25.196Z,1537658365.196 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:19:52.867Z,1537658392.867 [RDI_Pathfinder](ERROR): Failed to parse:
:H8c,0ffe,*14.208,*-0.123,*0.000
2018-09-22T23:20:00.806Z,1537658400.806 [DataOverHttps](INFO): setting unavailable, lastComms_.elapsed()=180.409378
2018-09-22T23:21:25.596Z,1537658485.596 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:21:34.041Z,1537658494.041 [RDI_Pathfinder](ERROR): Failed to parse:
0e8d,0ffe,*14.194,*-0.130,*0.000
2018-09-22T23:22:25.599Z,1537658545.599 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:22:32.021Z,1537658552.021 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-22T23:22:32.021Z,1537658552.021 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-3768,V
2018-09-22T23:22:42.026Z,1537658562.026 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-22T23:22:42.027Z,1537658562.027 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-3276,V
2018-09-22T23:23:02.032Z,1537658582.032 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for altitude
2018-09-22T23:23:02.033Z,1537658582.033 [RDI_Pathfinder](ERROR): Failed to parse:
:BD,        +0    +0.00,        +0.00,   0.00,3666.44
2018-09-22T23:23:25.596Z,1537658605.596 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:24:24.507Z,1537658664.507 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for altitude
2018-09-22T23:24:24.507Z,1537658664.507 [RDI_Pathfinder](ERROR): Failed to parse:
:BD,        +0    +0.00,        +0.00,   0.00,3749.42
2018-09-22T23:24:25.248Z,1537658665.248 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:25:25.647Z,1537658725.647 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:26:25.646Z,1537658785.646 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:27:26.473Z,1537658846.473 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:28:26.473Z,1537658906.473 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:29:26.846Z,1537658966.846 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:30:26.867Z,1537659026.867 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:30:40.913Z,1537659040.913 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-22T23:30:40.913Z,1537659040.913 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092216361465,.1,   0.0,1448.9,  0
2018-09-22T23:31:27.264Z,1537659087.264 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:31:30.905Z,1537659090.905 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-22T23:31:30.905Z,1537659090.905 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092216370465,35.0, -0.1,   .9,  0
2018-09-22T23:32:08.505Z,1537659128.505 [RDI_Pathfinder](ERROR): Failed to parse:

2018-09-22T23:32:27.268Z,1537659147.268 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:33:20.902Z,1537659200.902 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for altitude
2018-09-22T23:33:20.902Z,1537659200.902 [RDI_Pathfinder](ERROR): Failed to parse:
:BD,        +0.  0.00,4285.24
2018-09-22T23:33:28.064Z,1537659208.064 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:33:40.894Z,1537659220.894 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-22T23:33:40.894Z,1537659220.894 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092216391465,35.0, -0.1,   0.0,10
2018-09-22T23:34:20.894Z,1537659260.894 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-22T23:34:20.894Z,1537659260.894 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092216395465,31,   0.0,1448.9,  0
2018-09-22T23:34:28.071Z,1537659268.071 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:35:28.468Z,1537659328.468 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:36:28.147Z,1537659388.147 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:36:35.751Z,1537659395.751 [RDI_Pathfinder](ERROR): only read 4 of 5 data items
2018-09-22T23:36:35.752Z,1537659395.752 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-32768        +0.00,        +0.00,        +0.00,   0.00,4480.15
2018-09-22T23:37:28.530Z,1537659448.530 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:38:28.528Z,1537659508.528 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:39:28.149Z,1537659568.149 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:39:56.986Z,1537659596.986 [BPC1](INFO): Calculating totals. Valid battery stick count: 56. Valid reserve battery stick count: 6.
2018-09-22T23:40:28.540Z,1537659628.540 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:41:28.943Z,1537659688.943 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:42:28.547Z,1537659748.547 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:43:29.340Z,1537659809.340 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:44:29.740Z,1537659869.740 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:45:29.743Z,1537659929.743 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:45:44.179Z,1537659944.179 [RDI_Pathfinder](ERROR): Failed to parse:
:HM,G,D,0e8d,0ffe,*14.174,*-0.127,*0.000
2018-09-22T23:46:30.144Z,1537659990.144 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:47:13.807Z,1537660033.807 [RDI_Pathfinder](ERROR): Unknown system health message
2018-09-22T23:47:13.807Z,1537660033.807 [RDI_Pathfinder] Hardware Fault, FailCount= 1
2018-09-22T23:47:13.808Z,1537660033.808 [RDI_Pathfinder](ERROR): Hardware Fault
2018-09-22T23:47:14.066Z,1537660034.066 [CBIT](ERROR): Hardware Fault in component: RDI_Pathfinder
2018-09-22T23:47:14.231Z,1537660034.231 [RDI_Pathfinder](INFO): Powering down
2018-09-22T23:47:15.089Z,1537660035.089 [CBIT](INFO): Clearing failed state for component RDI_Pathfinder
2018-09-22T23:47:15.090Z,1537660035.090 [RDI_Pathfinder] No Fault, FailCount= 0
2018-09-22T23:47:28.577Z,1537660048.577 [RDI_Pathfinder](ERROR): Failed to parse:Pathfinder
2018-09-22T23:47:29.747Z,1537660049.747 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:48:30.544Z,1537660110.544 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:49:30.147Z,1537660170.147 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:50:30.544Z,1537660230.544 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:51:30.547Z,1537660290.547 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:52:30.945Z,1537660350.945 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:53:31.344Z,1537660411.344 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:54:31.744Z,1537660471.744 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:55:31.744Z,1537660531.744 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:56:31.747Z,1537660591.747 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:57:15.797Z,1537660635.797 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-22T23:57:15.798Z,1537660635.798 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092217024, -0.1,   0.0,1448.9,  0
2018-09-22T23:57:31.771Z,1537660651.771 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:58:31.768Z,1537660711.768 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-22T23:58:55.809Z,1537660735.809 [RDI_Pathfinder](ERROR): DVL BIT error. See manual. Result code: -32768
2018-09-22T23:58:55.810Z,1537660735.810 [RDI_Pathfinder](ERROR): Failed to parse:
:BS,-32768,-32768,-32768,V
2018-09-22T23:59:10.606Z,1537660750.606 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-32768,V
2018-09-22T23:59:31.768Z,1537660771.768 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:00:32.568Z,1537660832.568 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:01:15.798Z,1537660875.798 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-23T00:01:15.799Z,1537660875.799 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092217064948,35.0  0.0,1448.9,  0
2018-09-23T00:01:32.572Z,1537660892.572 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:02:11.829Z,1537660931.829 [profile_station:NeedComms] Running Loop=1
2018-09-23T00:02:11.829Z,1537660931.829 [profile_station:NeedComms](DEBUG): Aggregate::initialize profile_station:NeedComms
2018-09-23T00:02:11.829Z,1537660931.829 [profile_station:NeedComms:B.GoToSurface] Running Loop=1
2018-09-23T00:02:11.829Z,1537660931.829 [profile_station:NeedComms:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T00:02:11.830Z,1537660931.830 [profile_station:NeedComms:B.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-23T00:02:11.830Z,1537660931.830 [profile_station:NeedComms:B.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-23T00:02:11.831Z,1537660931.831 [profile_station:NeedComms:B.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-23T00:02:11.831Z,1537660931.831 [profile_station:NeedComms:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T00:02:11.831Z,1537660931.831 [profile_station:NeedComms:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T00:02:11.832Z,1537660931.832 [profile_station:NeedComms:A] Running Loop=1
2018-09-23T00:02:11.846Z,1537660931.846 [profile_station:NeedComms:A](INFO): last time_fix was: 1537658220.000000 second since 1970/01/01T00:00:00Z 
2018-09-23T00:02:11.846Z,1537660931.846 [profile_station:NeedComms:A] Stopped
2018-09-23T00:02:26.509Z,1537660946.509 [profile_station:NeedComms:C] Running Loop=1
2018-09-23T00:02:26.682Z,1537660946.682 [Radio_Surface](INFO): Powering up
2018-09-23T00:02:27.234Z,1537660947.234 [NAL9602](INFO): Powering up
2018-09-23T00:02:33.307Z,1537660953.307 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:02:36.933Z,1537660956.933 [BuoyancyServo](ERROR): getPosition uart error serial timeout
2018-09-23T00:02:36.933Z,1537660956.933 [BuoyancyServo](FAULT): Buoyancy getPosition uart error.serial timeout
2018-09-23T00:02:36.933Z,1537660956.933 [BuoyancyServo] Communications Fault, FailCount= 2
2018-09-23T00:02:36.933Z,1537660956.933 [BuoyancyServo](ERROR): Communications Fault
2018-09-23T00:02:37.002Z,1537660957.002 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-09-23T00:02:37.157Z,1537660957.157 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-23T00:02:37.158Z,1537660957.158 [BuoyancyServo](INFO): Powering down
2018-09-23T00:02:38.253Z,1537660958.253 [NAL9602](INFO): NAL9602 initialized
2018-09-23T00:02:38.721Z,1537660958.721 [BuoyancyServo](FAULT): LCB fault:  Current Limiter Activated.
2018-09-23T00:02:38.721Z,1537660958.721 [BuoyancyServo] Hardware Fault, FailCount= 2
2018-09-23T00:02:38.721Z,1537660958.721 [BuoyancyServo](ERROR): Hardware Fault
2018-09-23T00:02:39.154Z,1537660959.154 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-23T00:02:39.154Z,1537660959.154 [BuoyancyServo] No Fault, FailCount= 2
2018-09-23T00:02:39.532Z,1537660959.532 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-23T00:02:39.650Z,1537660959.650 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-23T00:02:53.035Z,1537660973.035 [NAL9602](INFO): SBD MO Status=0, MOMSN=1167, MT Status=0, MTMSN=0
2018-09-23T00:02:53.035Z,1537660973.035 [NAL9602](INFO): No messages in MT queue
2018-09-23T00:03:33.422Z,1537661013.422 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:04:21.430Z,1537661061.430 [NAL9602](INFO): GPS fix at 20180923T000410: (36.841746, -121.899254)
2018-09-23T00:04:21.503Z,1537661061.503 [UniversalFixResidualReporter](INFO): Fix residual: 28.9 %DT, over the last 2582.9 m. Residual distance 746.0 m at bearing 151.9 degrees. Fix at (36.8417, -121.8993) with 1973.3 m made good.
2018-09-23T00:04:21.515Z,1537661061.515 [profile_station:NeedComms:C] Stopped
2018-09-23T00:04:21.515Z,1537661061.515 [profile_station:NeedComms:D] Running Loop=1
2018-09-23T00:04:33.748Z,1537661073.748 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:04:36.938Z,1537661076.938 [NAL9602](INFO): SBD MO Status=1, MOMSN=1168, MT Status=0, MTMSN=0
2018-09-23T00:04:36.997Z,1537661076.997 [NAL9602](INFO): Sent 90 bytes from file Logs/20180922T190757/Courier0084.lzma
2018-09-23T00:04:36.997Z,1537661076.997 [NAL9602](INFO): Packets left to send: 0
2018-09-23T00:04:36.000Z,1537661077.000 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Courier0084.lzma.parts/0000.sbd
2018-09-23T00:04:37.000Z,1537661077.000 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Courier0084.lzma
2018-09-23T00:04:46.760Z,1537661086.760 [NAL9602](INFO): SBD MO Status=1, MOMSN=1169, MT Status=0, MTMSN=0
2018-09-23T00:04:46.809Z,1537661086.809 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0085.lzma
2018-09-23T00:04:46.809Z,1537661086.809 [NAL9602](INFO): Packets left to send: 8
2018-09-23T00:04:46.811Z,1537661086.811 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0085.lzma.parts/0008.sbd
2018-09-23T00:04:55.356Z,1537661095.356 [NAL9602](INFO): SBD MO Status=1, MOMSN=1170, MT Status=0, MTMSN=0
2018-09-23T00:04:55.407Z,1537661095.407 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0085.lzma
2018-09-23T00:04:55.408Z,1537661095.408 [NAL9602](INFO): Packets left to send: 7
2018-09-23T00:04:55.411Z,1537661095.411 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0085.lzma.parts/0007.sbd
2018-09-23T00:05:03.940Z,1537661103.940 [NAL9602](INFO): SBD MO Status=1, MOMSN=1171, MT Status=0, MTMSN=0
2018-09-23T00:05:03.993Z,1537661103.993 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0085.lzma
2018-09-23T00:05:03.993Z,1537661103.993 [NAL9602](INFO): Packets left to send: 6
2018-09-23T00:05:03.995Z,1537661103.995 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0085.lzma.parts/0006.sbd
2018-09-23T00:05:17.288Z,1537661117.288 [NAL9602](INFO): SBD MO Status=1, MOMSN=1172, MT Status=0, MTMSN=0
2018-09-23T00:05:17.341Z,1537661117.341 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0085.lzma
2018-09-23T00:05:17.342Z,1537661117.342 [NAL9602](INFO): Packets left to send: 5
2018-09-23T00:05:17.343Z,1537661117.343 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0085.lzma.parts/0005.sbd
2018-09-23T00:05:33.480Z,1537661133.480 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:05:44.320Z,1537661144.320 [NAL9602](INFO): SBD MO Status=2, MOMSN=1173, MT Status=2, MTMSN=0
2018-09-23T00:05:44.320Z,1537661144.320 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-23T00:05:48.331Z,1537661148.331 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for altitude
2018-09-23T00:05:48.331Z,1537661148.331 [RDI_Pathfinder](ERROR): Failed to parse:
:BD,        +0.00,      HM,G,D,0e8d,0ffe,*14.154,*-0.127,*0.000
2018-09-23T00:06:07.280Z,1537661167.280 [NAL9602](INFO): SBD MO Status=1, MOMSN=1173, MT Status=0, MTMSN=0
2018-09-23T00:06:07.333Z,1537661167.333 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0085.lzma
2018-09-23T00:06:07.333Z,1537661167.333 [NAL9602](INFO): Packets left to send: 4
2018-09-23T00:06:07.334Z,1537661167.334 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0085.lzma.parts/0004.sbd
2018-09-23T00:06:18.287Z,1537661178.287 [NAL9602](INFO): SBD MO Status=1, MOMSN=1174, MT Status=0, MTMSN=0
2018-09-23T00:06:18.341Z,1537661178.341 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0085.lzma
2018-09-23T00:06:18.341Z,1537661178.341 [NAL9602](INFO): Packets left to send: 3
2018-09-23T00:06:18.343Z,1537661178.343 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0085.lzma.parts/0003.sbd
2018-09-23T00:06:31.272Z,1537661191.272 [NAL9602](INFO): SBD MO Status=1, MOMSN=1175, MT Status=0, MTMSN=0
2018-09-23T00:06:31.337Z,1537661191.337 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0085.lzma
2018-09-23T00:06:31.337Z,1537661191.337 [NAL9602](INFO): Packets left to send: 2
2018-09-23T00:06:31.339Z,1537661191.339 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0085.lzma.parts/0002.sbd
2018-09-23T00:06:34.654Z,1537661194.654 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:06:43.048Z,1537661203.048 [NAL9602](INFO): SBD MO Status=1, MOMSN=1176, MT Status=0, MTMSN=0
2018-09-23T00:06:43.105Z,1537661203.105 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0085.lzma
2018-09-23T00:06:43.105Z,1537661203.105 [NAL9602](INFO): Packets left to send: 1
2018-09-23T00:06:43.106Z,1537661203.106 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0085.lzma.parts/0001.sbd
2018-09-23T00:06:56.012Z,1537661216.012 [NAL9602](INFO): SBD MO Status=1, MOMSN=1177, MT Status=0, MTMSN=0
2018-09-23T00:06:56.061Z,1537661216.061 [NAL9602](INFO): Sent 53 bytes from file Logs/20180922T190757/Express0085.lzma
2018-09-23T00:06:56.062Z,1537661216.062 [NAL9602](INFO): Packets left to send: 0
2018-09-23T00:06:56.063Z,1537661216.063 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0085.lzma.parts/0000.sbd
2018-09-23T00:06:56.063Z,1537661216.063 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Express0085.lzma
2018-09-23T00:07:04.008Z,1537661224.008 [NAL9602](INFO): SBD MO Status=0, MOMSN=1178, MT Status=0, MTMSN=0
2018-09-23T00:07:04.115Z,1537661224.115 [profile_station:NeedComms:D] Stopped
2018-09-23T00:07:04.115Z,1537661224.115 [profile_station:NeedComms:E] Running Loop=1
2018-09-23T00:07:06.419Z,1537661226.419 [NAL9602](INFO): GPS fix at 20180923T000655: (36.842002, -121.899207)
2018-09-23T00:07:06.480Z,1537661226.480 [profile_station:NeedComms:E] Stopped
2018-09-23T00:07:06.485Z,1537661226.485 [profile_station:NeedComms](INFO): Completed profile_station:NeedComms
2018-09-23T00:07:06.485Z,1537661226.485 [profile_station:NeedComms] Stopped
2018-09-23T00:07:06.485Z,1537661226.485 [profile_station:NeedComms](DEBUG): Aggregate::uninitialize profile_station:NeedComms
2018-09-23T00:07:06.485Z,1537661226.485 [profile_station:NeedComms:B.GoToSurface] Stopped
2018-09-23T00:07:06.485Z,1537661226.485 [profile_station:NeedComms:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-23T00:07:19.651Z,1537661239.651 [RDI_Pathfinder](ERROR): only read 4 of 5 data items
2018-09-23T00:07:19.651Z,1537661239.651 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-327S,-32768,-32768,-32768,V
2018-09-23T00:07:25.458Z,1537661245.458 [Radio_Surface](INFO): Powering down
2018-09-23T00:07:33.604Z,1537661253.604 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:07:33.647Z,1537661253.647 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for altitude
2018-09-23T00:07:33.647Z,1537661253.647 [RDI_Pathfinder](ERROR): Failed to parse:
:BD,        +0.00 +0.00,        +0.00,   0.00,1204.94
2018-09-23T00:07:38.814Z,1537661258.814 [NAL9602](INFO): Powering down
2018-09-23T00:08:34.028Z,1537661314.028 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:08:43.278Z,1537661323.278 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-23T00:08:43.279Z,1537661323.279 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,32768,-32768,V
2018-09-23T00:09:27.666Z,1537661367.666 [RDI_Pathfinder](ERROR): Failed to parse::SA,   +0.00,   +0.00,  0.00
2018-09-23T00:09:34.032Z,1537661374.032 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:10:34.034Z,1537661434.034 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:11:34.059Z,1537661494.059 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:12:34.052Z,1537661554.052 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:13:34.052Z,1537661614.052 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:14:34.461Z,1537661674.461 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:15:34.856Z,1537661734.856 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:16:34.856Z,1537661794.856 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:17:35.252Z,1537661855.252 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:18:35.254Z,1537661915.254 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:19:35.652Z,1537661975.652 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:20:36.053Z,1537662036.053 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:21:36.455Z,1537662096.455 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:22:07.675Z,1537662127.675 [RDI_Pathfinder](ERROR): Failed to parse:
:HM,G,D,0e8c,0ffe,*14.073,*-0.145,*0.000
2018-09-23T00:22:36.058Z,1537662156.057 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:23:36.852Z,1537662216.852 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:24:37.252Z,1537662277.252 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:25:36.855Z,1537662336.855 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:26:37.652Z,1537662397.652 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:27:38.052Z,1537662458.052 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:28:38.052Z,1537662518.052 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:29:38.452Z,1537662578.452 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:30:38.457Z,1537662638.457 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:31:38.464Z,1537662698.464 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:32:38.864Z,1537662758.864 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:33:38.468Z,1537662818.468 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:34:38.864Z,1537662878.864 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:35:39.264Z,1537662939.264 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:36:39.267Z,1537662999.267 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:37:39.264Z,1537663059.264 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:38:39.664Z,1537663119.664 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:39:39.664Z,1537663179.664 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:40:39.666Z,1537663239.666 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:41:40.064Z,1537663300.064 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:42:40.067Z,1537663360.067 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:43:40.527Z,1537663420.527 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:44:05.753Z,1537663445.753 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-23T00:44:05.753Z,1537663445.753 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,32768,V
2018-09-23T00:44:15.761Z,1537663455.761 [RDI_Pathfinder](ERROR): only read 4 of 5 data items
2018-09-23T00:44:15.762Z,1537663455.762 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-327S,-32768,-32768,-32768,V
2018-09-23T00:44:40.134Z,1537663480.134 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:44:46.630Z,1537663486.630 [profile_station:CircleWrapper:B.Circle] Stopped
2018-09-23T00:44:46.630Z,1537663486.630 [profile_station:CircleWrapper:B.Circle](DEBUG): Uninitialize.
2018-09-23T00:44:46.631Z,1537663486.631 [profile_station:CircleWrapper](INFO): Completed profile_station:CircleWrapper
2018-09-23T00:44:46.631Z,1537663486.631 [profile_station:CircleWrapper] Stopped
2018-09-23T00:44:46.631Z,1537663486.631 [profile_station:CircleWrapper](DEBUG): Aggregate::uninitialize profile_station:CircleWrapper
2018-09-23T00:44:46.631Z,1537663486.631 [profile_station:CircleWrapper:A] Stopped
2018-09-23T00:44:46.631Z,1537663486.631 [profile_station:CircleWrapper](INFO): Running loop #2
2018-09-23T00:44:46.631Z,1537663486.631 [profile_station:CircleWrapper] Running Loop=2
2018-09-23T00:44:46.631Z,1537663486.631 [profile_station:CircleWrapper](DEBUG): Aggregate::initialize profile_station:CircleWrapper
2018-09-23T00:44:46.632Z,1537663486.632 [profile_station:CircleWrapper:A] Running Loop=1
2018-09-23T00:44:46.632Z,1537663486.632 [profile_station:CircleWrapper:B.Circle] Running Loop=1
2018-09-23T00:44:46.632Z,1537663486.632 [profile_station:CircleWrapper:B.Circle](DEBUG): Initialize CircleComponent.
2018-09-23T00:45:16.359Z,1537663516.359 [WetLabsSeaOWL_UV_A](DEBUG): Error parsing data: SEAOWLA2K-019	3822	205	1603	1603	2708	244	1988	1988	3273	3273	77	

2018-09-23T00:45:25.763Z,1537663525.763 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-23T00:45:25.763Z,1537663525.763 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768V
2018-09-23T00:45:40.928Z,1537663540.928 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:45:50.226Z,1537663550.226 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for altitude
2018-09-23T00:45:50.226Z,1537663550.226 [RDI_Pathfinder](ERROR): Failed to parse:
:BD,        +0.00 +0.00,        +0.00,   0.00,3501.48
2018-09-23T00:46:40.588Z,1537663600.588 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:47:23.454Z,1537663643.454 [BPC1](INFO): Calculating totals. Valid battery stick count: 56. Valid reserve battery stick count: 6.
2018-09-23T00:47:40.588Z,1537663660.588 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:48:40.992Z,1537663720.992 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:49:41.012Z,1537663781.012 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:50:41.412Z,1537663841.412 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:51:24.269Z,1537663884.269 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-23T00:51:24.269Z,1537663884.269 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-3278,-32768,V
2018-09-23T00:51:41.412Z,1537663901.412 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:52:14.289Z,1537663934.289 [RDI_Pathfinder](ERROR): only read 1 of 1 data item for altitude
2018-09-23T00:52:14.289Z,1537663934.289 [RDI_Pathfinder](ERROR): Failed to parse:
:HM,G0ffe, 14.181, -0.135, 0.000
2018-09-23T00:52:33.491Z,1537663953.491 [profile_station:NeedComms] Running Loop=1
2018-09-23T00:52:33.491Z,1537663953.491 [profile_station:NeedComms](DEBUG): Aggregate::initialize profile_station:NeedComms
2018-09-23T00:52:33.491Z,1537663953.491 [profile_station:NeedComms:B.GoToSurface] Running Loop=1
2018-09-23T00:52:33.491Z,1537663953.491 [profile_station:NeedComms:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T00:52:33.491Z,1537663953.491 [profile_station:NeedComms:B.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-23T00:52:33.492Z,1537663953.492 [profile_station:NeedComms:B.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-23T00:52:33.492Z,1537663953.492 [profile_station:NeedComms:B.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-23T00:52:33.501Z,1537663953.501 [profile_station:NeedComms:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T00:52:33.501Z,1537663953.501 [profile_station:NeedComms:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T00:52:33.502Z,1537663953.502 [profile_station:NeedComms:A] Running Loop=1
2018-09-23T00:52:33.503Z,1537663953.503 [profile_station:NeedComms:A](INFO): last time_fix was: 1537661215.000000 second since 1970/01/01T00:00:00Z 
2018-09-23T00:52:33.504Z,1537663953.504 [profile_station:NeedComms:A] Stopped
2018-09-23T00:52:41.528Z,1537663961.528 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:53:40.354Z,1537664020.354 [profile_station:NeedComms:C] Running Loop=1
2018-09-23T00:53:40.358Z,1537664020.358 [Radio_Surface](INFO): Powering up
2018-09-23T00:53:41.070Z,1537664021.070 [NAL9602](INFO): Powering up
2018-09-23T00:53:41.869Z,1537664021.869 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:53:46.920Z,1537664026.920 [RDI_Pathfinder](ERROR): Failed to parse:
:HM,G,D,0e8d,0ffe,*14.154,*-0.127,*0.000
2018-09-23T00:53:50.517Z,1537664030.517 [BuoyancyServo](ERROR): getPosition uart error serial timeout
2018-09-23T00:53:50.517Z,1537664030.517 [BuoyancyServo](FAULT): Buoyancy getPosition uart error.serial timeout
2018-09-23T00:53:50.517Z,1537664030.517 [BuoyancyServo] Communications Fault, FailCount= 3
2018-09-23T00:53:50.517Z,1537664030.517 [BuoyancyServo](ERROR): Communications Fault
2018-09-23T00:53:50.600Z,1537664030.600 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-09-23T00:53:50.754Z,1537664030.754 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-23T00:53:50.755Z,1537664030.755 [BuoyancyServo](INFO): Powering down
2018-09-23T00:53:52.232Z,1537664032.232 [NAL9602](INFO): NAL9602 initialized
2018-09-23T00:53:52.332Z,1537664032.332 [BuoyancyServo](FAULT): LCB fault:  Current Limiter Activated.
2018-09-23T00:53:52.332Z,1537664032.332 [BuoyancyServo] Hardware Fault, FailCount= 3
2018-09-23T00:53:52.332Z,1537664032.332 [BuoyancyServo](ERROR): Hardware Fault
2018-09-23T00:53:52.737Z,1537664032.737 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-23T00:53:52.737Z,1537664032.737 [BuoyancyServo] No Fault, FailCount= 3
2018-09-23T00:53:53.144Z,1537664033.144 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-23T00:53:53.262Z,1537664033.262 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-23T00:54:42.240Z,1537664082.240 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:55:42.262Z,1537664142.262 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:56:42.626Z,1537664202.626 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:57:43.031Z,1537664263.031 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:57:44.252Z,1537664264.252 [NAL9602](INFO): SBD MO Status=2, MOMSN=1179, MT Status=2, MTMSN=0
2018-09-23T00:57:44.256Z,1537664264.256 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-23T00:57:56.232Z,1537664276.232 [NAL9602](INFO): SBD MO Status=0, MOMSN=1179, MT Status=0, MTMSN=0
2018-09-23T00:57:56.233Z,1537664276.233 [NAL9602](INFO): No messages in MT queue
2018-09-23T00:57:57.446Z,1537664277.446 [NAL9602](INFO): GPS fix at 20180923T005746: (36.842547, -121.898759)
2018-09-23T00:57:57.519Z,1537664277.519 [UniversalFixResidualReporter](INFO): Fix residual: 26.3 %DT, over the last 2660.4 m. Residual distance 700.2 m at bearing 162.1 degrees. Fix at (36.8425, -121.8988) with 72.5 m made good.
2018-09-23T00:57:57.548Z,1537664277.548 [profile_station:NeedComms:C] Stopped
2018-09-23T00:57:57.548Z,1537664277.548 [profile_station:NeedComms:D] Running Loop=1
2018-09-23T00:58:17.328Z,1537664297.328 [NAL9602](INFO): SBD MO Status=1, MOMSN=1180, MT Status=0, MTMSN=0
2018-09-23T00:58:17.377Z,1537664297.377 [NAL9602](INFO): Sent 89 bytes from file Logs/20180922T190757/Courier0087.lzma
2018-09-23T00:58:17.378Z,1537664297.378 [NAL9602](INFO): Packets left to send: 0
2018-09-23T00:58:17.379Z,1537664297.379 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Courier0087.lzma.parts/0000.sbd
2018-09-23T00:58:17.380Z,1537664297.380 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Courier0087.lzma
2018-09-23T00:58:30.700Z,1537664310.700 [NAL9602](INFO): SBD MO Status=1, MOMSN=1181, MT Status=0, MTMSN=0
2018-09-23T00:58:30.757Z,1537664310.757 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0088.lzma
2018-09-23T00:58:30.758Z,1537664310.758 [NAL9602](INFO): Packets left to send: 7
2018-09-23T00:58:30.759Z,1537664310.759 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0088.lzma.parts/0007.sbd
2018-09-23T00:58:43.256Z,1537664323.256 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:58:47.264Z,1537664327.264 [NAL9602](INFO): SBD MO Status=1, MOMSN=1182, MT Status=0, MTMSN=0
2018-09-23T00:58:47.316Z,1537664327.316 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0088.lzma
2018-09-23T00:58:47.318Z,1537664327.318 [NAL9602](INFO): Packets left to send: 6
2018-09-23T00:58:47.320Z,1537664327.320 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0088.lzma.parts/0006.sbd
2018-09-23T00:58:57.864Z,1537664337.864 [NAL9602](INFO): SBD MO Status=1, MOMSN=1183, MT Status=0, MTMSN=0
2018-09-23T00:58:57.921Z,1537664337.921 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0088.lzma
2018-09-23T00:58:57.921Z,1537664337.921 [NAL9602](INFO): Packets left to send: 5
2018-09-23T00:58:57.923Z,1537664337.923 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0088.lzma.parts/0005.sbd
2018-09-23T00:59:43.652Z,1537664383.652 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T00:59:55.261Z,1537664395.261 [NAL9602](INFO): SBD MO Status=2, MOMSN=1184, MT Status=2, MTMSN=0
2018-09-23T00:59:55.261Z,1537664395.261 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-23T01:00:07.036Z,1537664407.036 [NAL9602](INFO): SBD MO Status=1, MOMSN=1184, MT Status=0, MTMSN=0
2018-09-23T01:00:07.085Z,1537664407.085 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0088.lzma
2018-09-23T01:00:07.085Z,1537664407.085 [NAL9602](INFO): Packets left to send: 4
2018-09-23T01:00:07.087Z,1537664407.087 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0088.lzma.parts/0004.sbd
2018-09-23T01:00:30.416Z,1537664430.416 [NAL9602](INFO): SBD MO Status=1, MOMSN=1185, MT Status=0, MTMSN=0
2018-09-23T01:00:30.465Z,1537664430.465 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0088.lzma
2018-09-23T01:00:30.465Z,1537664430.465 [NAL9602](INFO): Packets left to send: 3
2018-09-23T01:00:30.467Z,1537664430.467 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0088.lzma.parts/0003.sbd
2018-09-23T01:00:41.776Z,1537664441.776 [NAL9602](INFO): SBD MO Status=1, MOMSN=1186, MT Status=0, MTMSN=0
2018-09-23T01:00:41.825Z,1537664441.825 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0088.lzma
2018-09-23T01:00:41.825Z,1537664441.825 [NAL9602](INFO): Packets left to send: 2
2018-09-23T01:00:41.827Z,1537664441.827 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0088.lzma.parts/0002.sbd
2018-09-23T01:00:45.160Z,1537664445.160 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:00:51.946Z,1537664451.946 [NAL9602](INFO): SBD MO Status=1, MOMSN=1187, MT Status=0, MTMSN=0
2018-09-23T01:00:52.001Z,1537664452.001 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0088.lzma
2018-09-23T01:00:52.001Z,1537664452.001 [NAL9602](INFO): Packets left to send: 1
2018-09-23T01:00:52.003Z,1537664452.003 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0088.lzma.parts/0001.sbd
2018-09-23T01:01:02.620Z,1537664462.620 [NAL9602](INFO): SBD MO Status=1, MOMSN=1188, MT Status=0, MTMSN=0
2018-09-23T01:01:02.669Z,1537664462.669 [NAL9602](INFO): Sent 224 bytes from file Logs/20180922T190757/Express0088.lzma
2018-09-23T01:01:02.669Z,1537664462.669 [NAL9602](INFO): Packets left to send: 0
2018-09-23T01:01:02.670Z,1537664462.670 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0088.lzma.parts/0000.sbd
2018-09-23T01:01:02.671Z,1537664462.671 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Express0088.lzma
2018-09-23T01:01:11.818Z,1537664471.818 [NAL9602](INFO): SBD MO Status=0, MOMSN=1189, MT Status=0, MTMSN=0
2018-09-23T01:01:11.922Z,1537664471.922 [profile_station:NeedComms:D] Stopped
2018-09-23T01:01:11.923Z,1537664471.923 [profile_station:NeedComms:E] Running Loop=1
2018-09-23T01:01:14.256Z,1537664474.256 [NAL9602](INFO): GPS fix at 20180923T010104: (36.842809, -121.898814)
2018-09-23T01:01:14.322Z,1537664474.322 [profile_station:NeedComms:E] Stopped
2018-09-23T01:01:14.323Z,1537664474.323 [profile_station:NeedComms](INFO): Completed profile_station:NeedComms
2018-09-23T01:01:14.323Z,1537664474.323 [profile_station:NeedComms] Stopped
2018-09-23T01:01:14.323Z,1537664474.323 [profile_station:NeedComms](DEBUG): Aggregate::uninitialize profile_station:NeedComms
2018-09-23T01:01:14.323Z,1537664474.323 [profile_station:NeedComms:B.GoToSurface] Stopped
2018-09-23T01:01:14.324Z,1537664474.324 [profile_station:NeedComms:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-23T01:01:43.812Z,1537664503.812 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:01:44.954Z,1537664504.954 [Radio_Surface](INFO): Powering down
2018-09-23T01:01:46.646Z,1537664506.646 [NAL9602](INFO): Powering down
2018-09-23T01:02:44.263Z,1537664564.263 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:03:44.660Z,1537664624.660 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:03:54.958Z,1537664634.958 [WetLabsSeaOWL_UV_A](DEBUG): Error parsing data: SEAOWLA2K-019	3810	633	5942	5942	329	329

2018-09-23T01:04:45.060Z,1537664685.060 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:05:45.060Z,1537664745.060 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:06:45.064Z,1537664805.064 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:07:11.496Z,1537664831.496 [RDI_Pathfinder](ERROR): Failed to parse:

2018-09-23T01:07:45.067Z,1537664865.067 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:08:45.466Z,1537664925.466 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:09:45.464Z,1537664985.464 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:10:45.469Z,1537665045.469 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:11:07.920Z,1537665067.920 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for altitude
2018-09-23T01:11:07.921Z,1537665067.921 [RDI_Pathfinder](ERROR): Failed to parse:
:BD,        +0.00,        +0.00,        +7.88
2018-09-23T01:11:45.864Z,1537665105.864 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:12:46.264Z,1537665166.264 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:13:27.902Z,1537665207.902 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-23T01:13:27.902Z,1537665207.902 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-2768,-32768,-32768,V
2018-09-23T01:13:43.529Z,1537665223.529 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-23T01:13:43.529Z,1537665223.529 [RDI_Pathfinder](ERROR): Failed to parse:
:TS     +0.00,        +0.00,        +0.00,   0.00,5173.81
2018-09-23T01:13:45.868Z,1537665225.868 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:14:46.267Z,1537665286.267 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:15:46.664Z,1537665346.664 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:16:07.896Z,1537665367.896 [RDI_Pathfinder](ERROR): only read 4 of 5 data items
2018-09-23T01:16:07.905Z,1537665367.905 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-32768-32768,-32768,-32768,V
2018-09-23T01:16:46.688Z,1537665406.688 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:17:47.092Z,1537665467.092 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:18:47.094Z,1537665527.094 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:19:47.513Z,1537665587.513 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:20:47.519Z,1537665647.519 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:21:47.897Z,1537665707.897 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:22:48.288Z,1537665768.288 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:23:48.688Z,1537665828.688 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:23:51.526Z,1537665831.526 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-23T01:23:51.526Z,1537665831.526 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092218292548,35.0, -0.1,448.9,  0
2018-09-23T01:24:48.701Z,1537665888.701 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:25:48.691Z,1537665948.691 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:26:48.691Z,1537666008.691 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:27:49.088Z,1537666069.088 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:27:51.522Z,1537666071.522 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-23T01:27:51.522Z,1537666071.522 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-3768,V
2018-09-23T01:28:49.088Z,1537666129.088 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:29:49.888Z,1537666189.888 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:30:39.518Z,1537666239.518 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-23T01:30:39.518Z,1537666239.518 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092218360, -0.1,   0.0,1448.9,  0
2018-09-23T01:30:49.888Z,1537666249.888 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:31:49.907Z,1537666309.907 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:32:49.908Z,1537666369.908 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:33:50.304Z,1537666430.304 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:34:43.538Z,1537666483.538 [RDI_Pathfinder](ERROR): only read 2 of 5 data items
2018-09-23T01:34:43.538Z,1537666483.538 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768-32768,V
2018-09-23T01:34:50.704Z,1537666490.704 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:35:50.711Z,1537666550.711 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:36:03.558Z,1537666563.558 [RDI_Pathfinder](ERROR): Failed to parse:
:HM,G,D,0e8d,0fff, 14.066, -0.136, 0.000
2018-09-23T01:36:43.531Z,1537666603.531 [RDI_Pathfinder](ERROR): DVL BIT error. See manual. Result code: 32768
2018-09-23T01:36:43.532Z,1537666603.532 [RDI_Pathfinder](ERROR): Failed to parse:
:BS,-32768,-32768,-32768,V
2018-09-23T01:36:51.123Z,1537666611.123 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:37:51.124Z,1537666671.124 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:38:51.131Z,1537666731.131 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:39:51.140Z,1537666791.140 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:40:34.363Z,1537666834.363 [profile_station:CircleWrapper:B.Circle] Stopped
2018-09-23T01:40:34.364Z,1537666834.364 [profile_station:CircleWrapper:B.Circle](DEBUG): Uninitialize.
2018-09-23T01:40:34.364Z,1537666834.364 [profile_station:CircleWrapper](INFO): Completed profile_station:CircleWrapper
2018-09-23T01:40:34.364Z,1537666834.364 [profile_station:CircleWrapper] Stopped
2018-09-23T01:40:34.365Z,1537666834.365 [profile_station:CircleWrapper](DEBUG): Aggregate::uninitialize profile_station:CircleWrapper
2018-09-23T01:40:34.365Z,1537666834.365 [profile_station:CircleWrapper:A] Stopped
2018-09-23T01:40:34.365Z,1537666834.365 [profile_station:CircleWrapper](INFO): Running loop #3
2018-09-23T01:40:34.365Z,1537666834.365 [profile_station:CircleWrapper] Running Loop=3
2018-09-23T01:40:34.365Z,1537666834.365 [profile_station:CircleWrapper](DEBUG): Aggregate::initialize profile_station:CircleWrapper
2018-09-23T01:40:34.365Z,1537666834.365 [profile_station:CircleWrapper:A] Running Loop=1
2018-09-23T01:40:34.366Z,1537666834.366 [profile_station:CircleWrapper:B.Circle] Running Loop=1
2018-09-23T01:40:34.366Z,1537666834.366 [profile_station:CircleWrapper:B.Circle](DEBUG): Initialize CircleComponent.
2018-09-23T01:40:51.134Z,1537666851.134 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:41:33.552Z,1537666893.552 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-23T01:41:33.552Z,1537666893.552 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092218470748,.1,   0.0,1448.9,  0
2018-09-23T01:41:51.504Z,1537666911.504 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:42:43.539Z,1537666963.539 [RDI_Pathfinder](ERROR): Failed to parse:768,-32768,-32768,-32768,V
2018-09-23T01:42:51.913Z,1537666971.913 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:43:52.304Z,1537667032.304 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:44:52.304Z,1537667092.304 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:45:52.304Z,1537667152.304 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:46:25.596Z,1537667185.596 [profile_station:NeedComms] Running Loop=1
2018-09-23T01:46:25.596Z,1537667185.596 [profile_station:NeedComms](DEBUG): Aggregate::initialize profile_station:NeedComms
2018-09-23T01:46:25.601Z,1537667185.601 [profile_station:NeedComms:B.GoToSurface] Running Loop=1
2018-09-23T01:46:25.601Z,1537667185.601 [profile_station:NeedComms:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T01:46:25.601Z,1537667185.601 [profile_station:NeedComms:B.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-23T01:46:25.602Z,1537667185.602 [profile_station:NeedComms:B.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-23T01:46:25.602Z,1537667185.602 [profile_station:NeedComms:B.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-23T01:46:25.603Z,1537667185.603 [profile_station:NeedComms:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T01:46:25.603Z,1537667185.603 [profile_station:NeedComms:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T01:46:25.603Z,1537667185.603 [profile_station:NeedComms:A] Running Loop=1
2018-09-23T01:46:25.609Z,1537667185.609 [profile_station:NeedComms:A](INFO): last time_fix was: 1537664464.000000 second since 1970/01/01T00:00:00Z 
2018-09-23T01:46:25.609Z,1537667185.609 [profile_station:NeedComms:A] Stopped
2018-09-23T01:46:52.960Z,1537667212.960 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:47:30.018Z,1537667250.018 [profile_station:NeedComms:C] Running Loop=1
2018-09-23T01:47:30.398Z,1537667250.398 [Radio_Surface](INFO): Powering up
2018-09-23T01:47:30.754Z,1537667250.754 [NAL9602](INFO): Powering up
2018-09-23T01:47:40.345Z,1537667260.345 [BuoyancyServo](ERROR): getPosition uart error serial timeout
2018-09-23T01:47:40.345Z,1537667260.345 [BuoyancyServo](FAULT): Buoyancy getPosition uart error.serial timeout
2018-09-23T01:47:40.345Z,1537667260.345 [BuoyancyServo] Communications Fault, FailCount= 4
2018-09-23T01:47:40.345Z,1537667260.345 [BuoyancyServo](ERROR): Communications Fault
2018-09-23T01:47:40.351Z,1537667260.351 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-09-23T01:47:40.506Z,1537667260.506 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-23T01:47:40.507Z,1537667260.507 [BuoyancyServo](INFO): Powering down
2018-09-23T01:47:41.575Z,1537667261.575 [NAL9602](INFO): NAL9602 initialized
2018-09-23T01:47:42.057Z,1537667262.057 [BuoyancyServo](FAULT): LCB fault:  Current Limiter Activated.
2018-09-23T01:47:42.057Z,1537667262.057 [BuoyancyServo] Hardware Fault, FailCount= 4
2018-09-23T01:47:42.057Z,1537667262.057 [BuoyancyServo](ERROR): Hardware Fault
2018-09-23T01:47:42.598Z,1537667262.598 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-23T01:47:42.598Z,1537667262.598 [BuoyancyServo] No Fault, FailCount= 4
2018-09-23T01:47:42.855Z,1537667262.855 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-23T01:47:42.970Z,1537667262.970 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-23T01:47:53.174Z,1537667273.174 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:48:23.180Z,1537667303.180 [NAL9602](IMPORTANT): SBD MO Status=0, MOMSN=1190, MT Status=1, MTMSN=51
2018-09-23T01:48:23.180Z,1537667303.180 [NAL9602](INFO): Data available in MT queue
2018-09-23T01:48:23.882Z,1537667303.882 [NAL9602](INFO): Received command:sched "load Science/profile_station.xml;set profile_station.MissionTimeout 3 hour;set profile_station.NeedCommsTime 45 minute;set profile_station.Lat 36.8342 degree;set profile_station.Lon -121.898 degree" 4zrhm 1 2
2018-09-23T01:48:23.900Z,1537667303.900 [CommandLine](IMPORTANT): got command schedule "load Science/profile_station.xml;set profile_station.MissionTimeout 3 hour;set profile_station.NeedCommsTime 45 minute;set profile_station.Lat 36.8342 degree;set profile_station.Lon -121.898 degree" 4zrhm 1 2.000000
2018-09-23T01:48:23.901Z,1537667303.901 [CommandLine](IMPORTANT): Scheduling command #1 of 2 with id=4zrhm
2018-09-23T01:48:23.902Z,1537667303.902 [CommandLine](IMPORTANT): Scheduled #7 (#1 of 2 with id='4zrhm'): "load Science/profile_station.xml;set profile_station.MissionTimeout 3 hour;set profile_station.NeedCommsTime 45 minute;set profile_station.Lat 36.8342 degree;set profile_station.Lon -121.898 degree"
2018-09-23T01:48:23.902Z,1537667303.902 [CommandLine](FAULT): Scheduling was paused by a command at 2018-09-22T20:39:00Z
2018-09-23T01:48:38.509Z,1537667318.509 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-23T01:48:38.509Z,1537667318.509 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092218541248,35.0, -0.1,   0.,  0
2018-09-23T01:48:53.280Z,1537667333.280 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:48:53.291Z,1537667333.291 [NAL9602](ERROR): parseGSV uart error: serial buffer full
2018-09-23T01:49:53.281Z,1537667393.281 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:50:53.680Z,1537667453.680 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:50:58.530Z,1537667458.530 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-23T01:50:58.530Z,1537667458.530 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092218563248,35.0, -0.1,   0.0,1448.BI,-32768,-32768,-32768,
2018-09-23T01:51:03.294Z,1537667463.294 [NAL9602](INFO): GPS fix at 20180923T015053: (36.842152, -121.899564)
2018-09-23T01:51:03.370Z,1537667463.370 [UniversalFixResidualReporter](INFO): Fix residual: 23.2 %DT, over the last 2641.2 m. Residual distance 613.6 m at bearing 162.9 degrees. Fix at (36.8422, -121.8996) with 98.9 m made good.
2018-09-23T01:51:03.386Z,1537667463.386 [profile_station:NeedComms:C] Stopped
2018-09-23T01:51:03.386Z,1537667463.386 [profile_station:NeedComms:D] Running Loop=1
2018-09-23T01:51:19.564Z,1537667479.564 [NAL9602](IMPORTANT): SBD MO Status=1, MOMSN=1191, MT Status=1, MTMSN=52
2018-09-23T01:51:19.617Z,1537667479.617 [NAL9602](INFO): Sent 73 bytes from file Logs/20180922T190757/Courier0090.lzma
2018-09-23T01:51:19.617Z,1537667479.617 [NAL9602](INFO): Packets left to send: 0
2018-09-23T01:51:19.619Z,1537667479.619 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Courier0090.lzma.parts/0000.sbd
2018-09-23T01:51:19.619Z,1537667479.619 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Courier0090.lzma
2018-09-23T01:51:20.157Z,1537667480.157 [NAL9602](INFO): Received command:sched "set profile_station.YoYoMaxDepth 20 meter;set profile_station.MaxDepth 30 meter;run " 4zrhm 2 2
2018-09-23T01:51:20.242Z,1537667480.242 [CommandLine](IMPORTANT): got command schedule "set profile_station.YoYoMaxDepth 20 meter;set profile_station.MaxDepth 30 meter;run " 4zrhm 2 2.000000
2018-09-23T01:51:20.243Z,1537667480.243 [CommandLine](IMPORTANT): Scheduling command #2 of 2 with id=4zrhm
2018-09-23T01:51:20.244Z,1537667480.244 [CommandLine](IMPORTANT): Scheduled #8 (#2 of 2 with id='4zrhm'): "set profile_station.YoYoMaxDepth 20 meter;set profile_station.MaxDepth 30 meter;run "
2018-09-23T01:51:20.244Z,1537667480.244 [CommandLine](FAULT): Scheduling was paused by a command at 2018-09-22T20:39:00Z
2018-09-23T01:51:30.952Z,1537667490.952 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.002576
2018-09-23T01:51:35.564Z,1537667495.564 [DataOverHttps](INFO): Sending 2980 bytes from file Logs/20180922T190757/Express0091.lzma
2018-09-23T01:51:36.748Z,1537667496.748 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0091.lzma.bak
2018-09-23T01:51:36.748Z,1537667496.748 [DataOverHttps](INFO): SBD MOMSN=8564088
2018-09-23T01:51:37.283Z,1537667497.283 [profile_station:NeedComms:D] Stopped
2018-09-23T01:51:37.283Z,1537667497.283 [profile_station:NeedComms:E] Running Loop=1
2018-09-23T01:51:51.561Z,1537667511.561 [NAL9602](INFO): SBD MO Status=1, MOMSN=1192, MT Status=0, MTMSN=0
2018-09-23T01:51:51.617Z,1537667511.617 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0091.lzma
2018-09-23T01:51:51.617Z,1537667511.617 [NAL9602](INFO): Packets left to send: 8
2018-09-23T01:51:51.619Z,1537667511.619 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0091.lzma.parts/0008.sbd
2018-09-23T01:51:55.558Z,1537667515.558 [NAL9602](INFO): GPS fix at 20180923T015145: (36.842248, -121.899602)
2018-09-23T01:51:55.631Z,1537667515.631 [profile_station:NeedComms:E] Stopped
2018-09-23T01:51:55.632Z,1537667515.632 [profile_station:NeedComms](INFO): Completed profile_station:NeedComms
2018-09-23T01:51:55.632Z,1537667515.632 [profile_station:NeedComms] Stopped
2018-09-23T01:51:55.632Z,1537667515.632 [profile_station:NeedComms](DEBUG): Aggregate::uninitialize profile_station:NeedComms
2018-09-23T01:51:55.632Z,1537667515.632 [profile_station:NeedComms:B.GoToSurface] Stopped
2018-09-23T01:51:55.632Z,1537667515.632 [profile_station:NeedComms:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-23T01:52:11.382Z,1537667531.382 [Radio_Surface](INFO): Powering down
2018-09-23T01:52:27.563Z,1537667547.563 [NAL9602](INFO): Powering down
2018-09-23T01:53:07.952Z,1537667587.952 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:54:00.498Z,1537667640.498 [RDI_Pathfinder](ERROR): Failed to parse:
:HM,G,D,0e8c,0fff, 14.161, -0.137, 0.000
2018-09-23T01:54:02.130Z,1537667642.130 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for altitude
2018-09-23T01:54:02.130Z,1537667642.130 [RDI_Pathfinder](ERROR): Failed to parse:
:BD,        +     +0.00,        +0.00,   0.00,7591.63
2018-09-23T01:54:08.064Z,1537667648.064 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:54:32.295Z,1537667672.295 [WetLabsSeaOWL_UV_A](DEBUG): Error parsing data: SEAOWLA2K-019	3815	651	36	5935	5935	3266	3266	78	330	330

2018-09-23T01:54:42.070Z,1537667682.070 [DataOverHttps](INFO): setting unavailable, lastComms_.elapsed()=180.125656
2018-09-23T01:54:50.953Z,1537667690.953 [BPC1](INFO): Calculating totals. Valid battery stick count: 56. Valid reserve battery stick count: 6.
2018-09-23T01:56:08.146Z,1537667768.146 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:56:44.191Z,1537667804.191 [RDI_Pathfinder](ERROR): Failed to parse:
68,-32768,-32768,-32768,V
2018-09-23T01:57:08.536Z,1537667828.536 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:58:08.936Z,1537667888.936 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T01:59:08.579Z,1537667948.579 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:00:08.582Z,1537668008.582 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:00:28.220Z,1537668028.220 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-32768,V
2018-09-23T02:01:08.979Z,1537668068.979 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:02:08.976Z,1537668128.976 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:03:09.379Z,1537668189.379 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:04:09.381Z,1537668249.381 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:04:44.806Z,1537668284.806 [WetLabsSeaOWL_UV_A](DEBUG): Error parsing data: 

2018-09-23T02:04:51.477Z,1537668291.477 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-23T02:04:51.478Z,1537668291.478 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092219102548,35.0, -0.1,448.9,  0
2018-09-23T02:05:09.452Z,1537668309.452 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:05:49.492Z,1537668349.492 [RDI_Pathfinder](ERROR): DVL BIT error. See manual. Result code: -32768
2018-09-23T02:05:49.494Z,1537668349.494 [RDI_Pathfinder](ERROR): Failed to parse:
:BS,-32768,-32768,-32768,V
2018-09-23T02:05:59.476Z,1537668359.476 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-23T02:05:59.477Z,1537668359.477 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092219113348,35.0, -0.1,448.9,  0
2018-09-23T02:06:01.485Z,1537668361.485 [RDI_Pathfinder](ERROR): only read 4 of 5 data items
2018-09-23T02:06:01.486Z,1537668361.486 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-32768-32768,-32768,-32768,V
2018-09-23T02:06:09.852Z,1537668369.852 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:06:30.334Z,1537668390.334 [profile_station](INFO): Timed out from 2018-09-22T23:06:30.3Z
2018-09-23T02:06:30.334Z,1537668390.334 [MissionManager](INFO): profile_station is completed.
2018-09-23T02:06:30.334Z,1537668390.334 [MissionManager](INFO): Uninitializing Mission profile_station
2018-09-23T02:06:30.334Z,1537668390.334 [profile_station] Stopped
2018-09-23T02:06:30.334Z,1537668390.334 [profile_station](DEBUG): Aggregate::uninitialize profile_station
2018-09-23T02:06:30.334Z,1537668390.334 [profile_station:Science] Stopped
2018-09-23T02:06:30.335Z,1537668390.335 [profile_station:Science](DEBUG): Aggregate::uninitialize profile_station:Science
2018-09-23T02:06:30.335Z,1537668390.335 [profile_station:Science:G] Stopped
2018-09-23T02:06:30.335Z,1537668390.335 [profile_station:Science:Read_Oil] Stopped
2018-09-23T02:06:30.335Z,1537668390.335 [profile_station:Science:PeakDetectChl] Stopped
2018-09-23T02:06:30.335Z,1537668390.335 [profile_station:Science:PeakDetectChl](DEBUG): Aggregate::uninitialize profile_station:Science:PeakDetectChl
2018-09-23T02:06:30.335Z,1537668390.335 [profile_station:Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2018-09-23T02:06:30.335Z,1537668390.335 [profile_station:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-23T02:06:30.335Z,1537668390.335 [profile_station:StandardEnvelopes] Stopped
2018-09-23T02:06:30.335Z,1537668390.335 [profile_station:StandardEnvelopes](DEBUG): Aggregate::uninitialize profile_station:StandardEnvelopes
2018-09-23T02:06:30.335Z,1537668390.335 [profile_station:StandardEnvelopes:A.AltitudeEnvelope] Stopped
2018-09-23T02:06:30.336Z,1537668390.336 [profile_station:StandardEnvelopes:A.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-23T02:06:30.336Z,1537668390.336 [profile_station:StandardEnvelopes:B.DepthEnvelope] Stopped
2018-09-23T02:06:30.336Z,1537668390.336 [profile_station:StandardEnvelopes:B.DepthEnvelope](DEBUG): Uninitialize.
2018-09-23T02:06:30.336Z,1537668390.336 [profile_station:StandardEnvelopes:C.OffshoreEnvelope] Stopped
2018-09-23T02:06:30.336Z,1537668390.336 [profile_station:StandardEnvelopes:C.OffshoreEnvelope](DEBUG): Uninitialize OffshoreEnvelopeComponent.
2018-09-23T02:06:30.336Z,1537668390.336 [profile_station:I.Pitch] Stopped
2018-09-23T02:06:30.336Z,1537668390.336 [profile_station:J.Buoyancy] Stopped
2018-09-23T02:06:30.336Z,1537668390.336 [profile_station:J.Buoyancy](DEBUG): Uninitialize Buoyancy Component.
2018-09-23T02:06:30.336Z,1537668390.336 [profile_station:K.SetSpeed] Stopped
2018-09-23T02:06:30.336Z,1537668390.336 [profile_station:K.SetSpeed](DEBUG): Uninitialize.
2018-09-23T02:06:30.336Z,1537668390.336 [profile_station:L.DepthEnvelope] Stopped
2018-09-23T02:06:30.336Z,1537668390.336 [profile_station:L.DepthEnvelope](DEBUG): Uninitialize.
2018-09-23T02:06:30.337Z,1537668390.337 [profile_station:M.AltitudeEnvelope] Stopped
2018-09-23T02:06:30.337Z,1537668390.337 [profile_station:M.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-23T02:06:30.337Z,1537668390.337 [profile_station:N.YoYo] Stopped
2018-09-23T02:06:30.337Z,1537668390.337 [profile_station:N.YoYo](DEBUG): Uninitialize YoYoComponent.
2018-09-23T02:06:30.337Z,1537668390.337 [profile_station:CircleWrapper] Stopped
2018-09-23T02:06:30.337Z,1537668390.337 [profile_station:CircleWrapper](DEBUG): Aggregate::uninitialize profile_station:CircleWrapper
2018-09-23T02:06:30.337Z,1537668390.337 [profile_station:CircleWrapper:A] Stopped
2018-09-23T02:06:30.337Z,1537668390.337 [profile_station:CircleWrapper:B.Circle] Stopped
2018-09-23T02:06:30.337Z,1537668390.337 [profile_station:CircleWrapper:B.Circle](DEBUG): Uninitialize.
2018-09-23T02:06:30.688Z,1537668390.688 [MissionManager](IMPORTANT): Started mission Default
2018-09-23T02:06:30.688Z,1537668390.688 [Default] Running Loop=1
2018-09-23T02:06:30.688Z,1537668390.688 [Default](DEBUG): Aggregate::initialize Default
2018-09-23T02:06:30.688Z,1537668390.688 [Default:B.GoToSurface] Running Loop=1
2018-09-23T02:06:30.688Z,1537668390.688 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T02:06:30.693Z,1537668390.693 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-23T02:06:30.693Z,1537668390.693 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-23T02:06:30.694Z,1537668390.694 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-23T02:06:30.694Z,1537668390.694 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T02:06:30.694Z,1537668390.694 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T02:06:30.695Z,1537668390.695 [Default:A.Wait] Running Loop=1
2018-09-23T02:06:30.695Z,1537668390.695 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-23T02:06:30.813Z,1537668390.813 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-23T02:06:31.115Z,1537668391.115 [ElevatorOffsetCalculator](INFO): New estimator for commanded vars: speed 1.00 m/s, pitch 30.00 deg, mass-position -22.00 mm (3 active estimators).
2018-09-23T02:06:44.010Z,1537668404.010 [BuoyancyServo](ERROR): getPosition uart error serial timeout
2018-09-23T02:06:44.010Z,1537668404.010 [BuoyancyServo](FAULT): Buoyancy getPosition uart error.serial timeout
2018-09-23T02:06:44.011Z,1537668404.011 [BuoyancyServo] Communications Fault, FailCount= 5
2018-09-23T02:06:44.011Z,1537668404.011 [BuoyancyServo](ERROR): Communications Fault
2018-09-23T02:06:44.156Z,1537668404.156 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-09-23T02:06:44.157Z,1537668404.157 [CBIT](CRITICAL): Communications Fault in component: BuoyancyServo
2018-09-23T02:06:44.279Z,1537668404.279 [Default:A.Wait](INFO): Done Waiting.
2018-09-23T02:06:44.279Z,1537668404.279 [Default:A.Wait] Stopped
2018-09-23T02:06:44.279Z,1537668404.279 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-23T02:06:44.289Z,1537668404.289 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-23T02:06:44.290Z,1537668404.290 [BuoyancyServo](INFO): Powering down
2018-09-23T02:06:44.403Z,1537668404.403 [CommandLine](FAULT): Scheduling is paused for 2 commands
2018-09-23T02:06:44.403Z,1537668404.403 [CBIT](INFO): Critical error at 20180923T020644
2018-09-23T02:06:44.404Z,1537668404.404 [Supervisor](INFO): Stop Mission called by CBIT::checkCriticals
2018-09-23T02:06:45.865Z,1537668405.865 [BuoyancyServo](FAULT): LCB fault:  Current Limiter Activated.
2018-09-23T02:06:45.865Z,1537668405.865 [BuoyancyServo] Hardware Fault, FailCount= 5
2018-09-23T02:06:45.865Z,1537668405.865 [BuoyancyServo](ERROR): Hardware Fault
2018-09-23T02:06:57.032Z,1537668417.032 [Default:CheckIn] Running Loop=1
2018-09-23T02:06:57.032Z,1537668417.032 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-23T02:06:57.032Z,1537668417.032 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-23T02:06:57.078Z,1537668417.078 [Radio_Surface](INFO): Powering up
2018-09-23T02:06:57.790Z,1537668417.790 [NAL9602](INFO): Powering up
2018-09-23T02:07:08.986Z,1537668428.986 [NAL9602](INFO): NAL9602 initialized
2018-09-23T02:07:09.780Z,1537668429.780 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:07:30.596Z,1537668450.596 [NAL9602](INFO): SBD MO Status=0, MOMSN=1193, MT Status=0, MTMSN=0
2018-09-23T02:07:30.596Z,1537668450.596 [NAL9602](INFO): No messages in MT queue
2018-09-23T02:07:44.355Z,1537668464.355 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.002631
2018-09-23T02:08:40.375Z,1537668520.375 [NAL9602](INFO): GPS fix at 20180923T020829: (36.838320, -121.896576)
2018-09-23T02:08:40.436Z,1537668520.436 [UniversalFixResidualReporter](INFO): Fix residual: 25.1 %DT, over the last 854.3 m. Residual distance 214.1 m at bearing 164.7 degrees. Fix at (36.8383, -121.8966) with 513.2 m made good.
2018-09-23T02:08:40.437Z,1537668520.437 [Default:CheckIn:Read_GPS] Stopped
2018-09-23T02:08:40.437Z,1537668520.437 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-23T02:08:44.016Z,1537668524.016 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180922T190757/Courier0093.lzma
2018-09-23T02:08:44.096Z,1537668524.096 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-23T02:08:44.096Z,1537668524.096 [BuoyancyServo] No Fault, FailCount= 5
2018-09-23T02:08:44.452Z,1537668524.452 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-23T02:08:44.570Z,1537668524.570 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-23T02:08:44.790Z,1537668524.790 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0093.lzma.bak
2018-09-23T02:08:44.790Z,1537668524.790 [DataOverHttps](INFO): SBD MOMSN=8564139
2018-09-23T02:08:54.313Z,1537668534.313 [DataOverHttps](INFO): Sending 146 bytes from file Logs/20180922T190757/Courier0096.lzma
2018-09-23T02:08:55.085Z,1537668535.085 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0096.lzma.bak
2018-09-23T02:08:55.086Z,1537668535.086 [DataOverHttps](INFO): SBD MOMSN=8564143
2018-09-23T02:09:04.363Z,1537668544.363 [DataOverHttps](INFO): Sending 403 bytes from file Logs/20180922T190757/Express0094.lzma
2018-09-23T02:09:05.133Z,1537668545.133 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0094.lzma.bak
2018-09-23T02:09:05.134Z,1537668545.134 [DataOverHttps](INFO): SBD MOMSN=8564147
2018-09-23T02:09:14.575Z,1537668554.575 [DataOverHttps](INFO): Sending 918 bytes from file Logs/20180922T190757/Express0097.lzma
2018-09-23T02:09:15.343Z,1537668555.343 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0097.lzma.bak
2018-09-23T02:09:15.343Z,1537668555.343 [DataOverHttps](INFO): SBD MOMSN=8564155
2018-09-23T02:09:15.823Z,1537668555.823 [NAL9602](INFO): Powering down
2018-09-23T02:09:15.860Z,1537668555.860 [Default:CheckIn:Read_Iridium] Stopped
2018-09-23T02:09:15.881Z,1537668555.881 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-23T02:09:15.881Z,1537668555.881 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-23T02:14:16.536Z,1537668856.536 [Default:CheckIn:C.Wait](INFO): Done Waiting.
2018-09-23T02:14:16.536Z,1537668856.536 [Default:CheckIn:C.Wait] Stopped
2018-09-23T02:14:16.536Z,1537668856.536 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-23T02:14:16.537Z,1537668856.537 [Default:CheckIn:D] Running Loop=1
2018-09-23T02:14:16.892Z,1537668856.892 [Default:CheckIn:D] Stopped
2018-09-23T02:14:16.893Z,1537668856.893 [Default:CheckIn:E] Running Loop=1
2018-09-23T02:14:17.296Z,1537668857.296 [Default:CheckIn:E](IMPORTANT): Default mission has been running for 7.770071 min 
2018-09-23T02:14:17.296Z,1537668857.296 [Default:CheckIn:E] Stopped
2018-09-23T02:14:17.296Z,1537668857.296 [Default:CheckIn](INFO): Completed Default:CheckIn
2018-09-23T02:14:17.296Z,1537668857.296 [Default:CheckIn] Stopped
2018-09-23T02:14:17.296Z,1537668857.296 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-23T02:14:17.297Z,1537668857.297 [Default:CheckIn](INFO): Running loop #2
2018-09-23T02:14:17.297Z,1537668857.297 [Default:CheckIn] Running Loop=2
2018-09-23T02:14:17.297Z,1537668857.297 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-23T02:14:17.297Z,1537668857.297 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-23T02:14:20.766Z,1537668860.766 [NAL9602](INFO): Powering up
2018-09-23T02:14:31.930Z,1537668871.930 [NAL9602](INFO): NAL9602 initialized
2018-09-23T02:14:51.116Z,1537668891.116 [NAL9602](INFO): SBD MO Status=0, MOMSN=1194, MT Status=0, MTMSN=0
2018-09-23T02:14:51.116Z,1537668891.116 [NAL9602](INFO): No messages in MT queue
2018-09-23T02:15:39.470Z,1537668939.470 [NAL9602](INFO): GPS fix at 20180923T021528: (36.838664, -121.896614)
2018-09-23T02:15:39.525Z,1537668939.525 [Default:CheckIn:Read_GPS] Stopped
2018-09-23T02:15:39.525Z,1537668939.525 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-23T02:15:44.156Z,1537668944.156 [DataOverHttps](INFO): Sending 62 bytes from file Logs/20180922T190757/Courier0099.lzma
2018-09-23T02:15:44.907Z,1537668944.907 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0099.lzma.bak
2018-09-23T02:15:44.907Z,1537668944.907 [DataOverHttps](INFO): SBD MOMSN=8564195
2018-09-23T02:15:54.051Z,1537668954.051 [DataOverHttps](INFO): Sending 128 bytes from file Logs/20180922T190757/Express0100.lzma
2018-09-23T02:15:54.845Z,1537668954.845 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0100.lzma.bak
2018-09-23T02:15:54.846Z,1537668954.846 [DataOverHttps](INFO): SBD MOMSN=8564198
2018-09-23T02:15:55.391Z,1537668955.391 [Default:CheckIn:Read_Iridium] Stopped
2018-09-23T02:15:55.391Z,1537668955.391 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-23T02:15:55.391Z,1537668955.391 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-23T02:16:14.216Z,1537668974.216 [NAL9602](INFO): Powering down
2018-09-23T02:19:00.328Z,1537669140.328 [DataOverHttps](IMPORTANT): SBD MTMSN=20180923T021850
2018-09-23T02:19:04.478Z,1537669144.478 [DataOverHttps](INFO): Received command:resume
2018-09-23T02:19:04.482Z,1537669144.482 [CommandLine](IMPORTANT): got command resume
2018-09-23T02:19:04.482Z,1537669144.482 [MissionManager](INFO): Loading Mission: ./Missions/Science/profile_station.xml
2018-09-23T02:19:04.683Z,1537669144.683 [MissionManager](INFO): DefineArg profile_station.MissionTimeout = 4.000000 h
2018-09-23T02:19:04.685Z,1537669144.685 [MissionManager](INFO): DefineArg profile_station.NeedCommsTime = 60.000000 min
2018-09-23T02:19:04.688Z,1537669144.688 [MissionManager](INFO): DefineArg profile_station.Lat = 36.806966 arcdeg
2018-09-23T02:19:04.690Z,1537669144.690 [MissionManager](INFO): DefineArg profile_station.Lon = -121.824326 arcdeg
2018-09-23T02:19:04.692Z,1537669144.692 [MissionManager](INFO): DefineArg profile_station.Radius = 300.000000 m
2018-09-23T02:19:04.695Z,1537669144.695 [MissionManager](INFO): DefineArg profile_station.YoYoMinDepth = 2.000000 m
2018-09-23T02:19:04.698Z,1537669144.698 [MissionManager](INFO): DefineArg profile_station.YoYoMaxDepth = 200.000000 m
2018-09-23T02:19:04.700Z,1537669144.700 [MissionManager](INFO): DefineArg profile_station.YoYoMinAltitude = 7.000000 m
2018-09-23T02:19:04.703Z,1537669144.703 [MissionManager](INFO): DefineArg profile_station.YoYoPitch = 20.000000 arcdeg
2018-09-23T02:19:04.705Z,1537669144.705 [MissionManager](INFO): DefineArg profile_station.Speed = 1.000000 m/s
2018-09-23T02:19:04.707Z,1537669144.707 [MissionManager](INFO): DefineArg profile_station.CircleMaxError = 100.000000 m
2018-09-23T02:19:04.710Z,1537669144.710 [MissionManager](INFO): DefineArg profile_station.CircleTurnToPort = 0 bool
2018-09-23T02:19:04.712Z,1537669144.712 [MissionManager](INFO): DefineArg profile_station.KwpHeading = 0.010000 rad/m
2018-09-23T02:19:04.714Z,1537669144.714 [MissionManager](INFO): DefineArg profile_station.MinAltitude = 5.000000 m
2018-09-23T02:19:04.717Z,1537669144.717 [MissionManager](INFO): DefineArg profile_station.MaxDepth = 205.000000 m
2018-09-23T02:19:04.719Z,1537669144.719 [MissionManager](INFO): DefineArg profile_station.MinOffshore = 2.000000 km
2018-09-23T02:19:04.720Z,1537669144.720 [MissionManager](INFO): Inserting Stack: Missions/Insert/Science.xml
2018-09-23T02:19:05.072Z,1537669145.072 [MissionManager](INFO): DefineArg profile_station:Science.SampleISUS = 0 bool
2018-09-23T02:19:05.074Z,1537669145.074 [MissionManager](INFO): DefineArg profile_station:Science.SampleISUSmaxPitch = 60.000000 arcdeg
2018-09-23T02:19:05.076Z,1537669145.076 [MissionManager](INFO): DefineArg profile_station:Science.SampleISUSminPitch = -60.000000 arcdeg
2018-09-23T02:19:05.079Z,1537669145.079 [MissionManager](INFO): DefineArg profile_station:Science.PeakDetectChlActive = 0 bool
2018-09-23T02:19:05.080Z,1537669145.080 [MissionManager](INFO): DefineArg profile_station:Science.HighestChlPeakReportActive = 0 bool
2018-09-23T02:19:05.083Z,1537669145.083 [MissionManager](INFO): DefineArg profile_station:Science.PatchTracking = 1 bool
2018-09-23T02:19:05.085Z,1537669145.085 [MissionManager](INFO): DefineArg profile_station:Science.FilterWidthHorizontal = 3.000000 count
2018-09-23T02:19:05.087Z,1537669145.087 [MissionManager](INFO): DefineArg profile_station:Science.NumProfilesSlidingwindow = 100.000000 count
2018-09-23T02:19:05.090Z,1537669145.090 [MissionManager](INFO): DefineArg profile_station:Science.OffPeakFractionHorizontal = 80.000000 %
2018-09-23T02:19:05.092Z,1537669145.092 [MissionManager](INFO): DefineArg profile_station:Science.PeakDetectNO3Active = 0 bool
2018-09-23T02:19:05.094Z,1537669145.094 [MissionManager](INFO): DefineArg profile_station:Science.PeakDetectOilActive = 0 bool
2018-09-23T02:19:05.096Z,1537669145.096 [MissionManager](INFO): DefineArg profile_station:Science.UpwardDerivativeOfTemperatureActive = 0 bool
2018-09-23T02:19:05.098Z,1537669145.098 [MissionManager](INFO): DefineArg profile_station:Science.EnabledAanderaaO2 = 0.000000 bool
2018-09-23T02:19:05.101Z,1537669145.101 [MissionManager](INFO): DefineArg profile_station:Science.EnabledNeilBrown = 0.000000 bool
2018-09-23T02:19:05.103Z,1537669145.103 [MissionManager](INFO): DefineArg profile_station:Science.EnabledSeabird = 0.000000 bool
2018-09-23T02:19:05.106Z,1537669145.106 [MissionManager](INFO): DefineArg profile_station:Science.EnabledTurbulence_NPS = 0.000000 bool
2018-09-23T02:19:05.109Z,1537669145.109 [MissionManager](INFO): DefineArg profile_station:Science.EnabledWetLabsBB2FL = 0.000000 bool
2018-09-23T02:19:05.111Z,1537669145.111 [MissionManager](INFO): DefineArg profile_station:Science.EnabledWetLabsSeaOWL_UV_A = 1.000000 bool
2018-09-23T02:19:05.114Z,1537669145.114 [MissionManager](INFO): DefineArg profile_station:Science.EnabledISUS = 0.000000 bool
2018-09-23T02:19:05.116Z,1537669145.116 [MissionManager](INFO): DefineArg profile_station:Science.LowPassWindowLength = 20.000000 count
2018-09-23T02:19:05.119Z,1537669145.119 [MissionManager](INFO): DefineArg profile_station:Science.PeakChlShallowBound = 10.000000 m
2018-09-23T02:19:05.152Z,1537669145.152 [MissionManager](INFO): DefineArg profile_station:Science.PeakChlDeepBound = 20.000000 m
2018-09-23T02:19:05.154Z,1537669145.154 [MissionManager](INFO): DefineOutput profile_station:Science.PeakChl = 0.000000 ug/l
2018-09-23T02:19:05.156Z,1537669145.156 [MissionManager](INFO): DefineOutput profile_station:Science.PeakChlDepth = 0.000000 m
2018-09-23T02:19:05.159Z,1537669145.159 [MissionManager](INFO): DefineOutput profile_station:Science.PeakChlTemperature = 0.000000 degC
2018-09-23T02:19:05.176Z,1537669145.176 [MissionManager](INFO): DefineOutput profile_station:Science.PeakChlLatitude = nan arcdeg
2018-09-23T02:19:05.179Z,1537669145.179 [MissionManager](INFO): DefineOutput profile_station:Science.PeakChlLongitude = nan arcdeg
2018-09-23T02:19:05.181Z,1537669145.181 [MissionManager](INFO): DefineOutput profile_station:Science.PeakNO3 = 0.000000 umol/l
2018-09-23T02:19:05.184Z,1537669145.184 [MissionManager](INFO): DefineOutput profile_station:Science.PeakNO3Depth = 0.000000 m
2018-09-23T02:19:05.201Z,1537669145.201 [MissionManager](INFO): DefineOutput profile_station:Science.PeakNO3Latitude = nan arcdeg
2018-09-23T02:19:05.203Z,1537669145.203 [MissionManager](INFO): DefineOutput profile_station:Science.PeakNO3Longitude = nan arcdeg
2018-09-23T02:19:05.206Z,1537669145.206 [MissionManager](INFO): DefineOutput profile_station:Science.PatchChl = 0.000000 m
2018-09-23T02:19:05.222Z,1537669145.222 [MissionManager](INFO): DefineOutput profile_station:Science.PatchChlDepth = 0.000000 m
2018-09-23T02:19:05.227Z,1537669145.227 [MissionManager](INFO): DefineOutput profile_station:Science.PatchChlLatitude = nan arcdeg
2018-09-23T02:19:05.276Z,1537669145.276 [MissionManager](INFO): DefineOutput profile_station:Science.PatchChlLongitude = nan arcdeg
2018-09-23T02:19:05.278Z,1537669145.278 [MissionManager](INFO): DefineOutput profile_station:Science.PatchChlDistance = nan m
2018-09-23T02:19:05.296Z,1537669145.296 [MissionManager](INFO): DefineOutput profile_station:Science.PeakOil = 0.000000 kg/m3
2018-09-23T02:19:05.322Z,1537669145.322 [MissionManager](INFO): DefineOutput profile_station:Science.PeakOilDepth = 0.000000 m
2018-09-23T02:19:05.325Z,1537669145.325 [MissionManager](INFO): DefineOutput profile_station:Science.PeakOilLatitude = nan arcdeg
2018-09-23T02:19:05.327Z,1537669145.327 [MissionManager](INFO): DefineOutput profile_station:Science.PeakOilLongitude = nan arcdeg
2018-09-23T02:19:05.400Z,1537669145.400 [profile_station:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-23T02:19:05.426Z,1537669145.426 [profile_station:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-23T02:19:05.464Z,1537669145.464 [profile_station:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-23T02:19:05.488Z,1537669145.488 [profile_station:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-23T02:19:05.496Z,1537669145.496 [MissionManager](INFO): RedefineArg profile_station:Science.SampleISUS = value:1 bool
2018-09-23T02:19:05.506Z,1537669145.506 [MissionManager](INFO): RedefineArg profile_station:Science.PeakDetectChlActive = value:1 bool
2018-09-23T02:19:05.507Z,1537669145.507 [MissionManager](INFO): Inserting Stack: Missions/Insert/NeedComms.xml
2018-09-23T02:19:05.583Z,1537669145.583 [MissionManager](INFO): DefineArg profile_station:NeedComms.DiveInterval = 3.000000 h
2018-09-23T02:19:05.610Z,1537669145.610 [MissionManager](INFO): DefineArg profile_station:NeedComms.WaitForPitchUp = 10.000000 min
2018-09-23T02:19:05.612Z,1537669145.612 [MissionManager](INFO): DefineArg profile_station:NeedComms.SurfacePitch = 20.000000 arcdeg
2018-09-23T02:19:05.614Z,1537669145.614 [MissionManager](INFO): DefineArg profile_station:NeedComms.SurfaceDepthRate = nan m/s
2018-09-23T02:19:05.616Z,1537669145.616 [MissionManager](INFO): DefineArg profile_station:NeedComms.SurfaceSpeed = 1.000000 m/s
2018-09-23T02:19:05.618Z,1537669145.618 [MissionManager](INFO): DefineArg profile_station:NeedComms.GPSTimeout = 7.000000 min
2018-09-23T02:19:05.620Z,1537669145.620 [MissionManager](INFO): DefineArg profile_station:NeedComms.CommsTimeout = 30.000000 min
2018-09-23T02:19:05.678Z,1537669145.678 [profile_station:NeedComms:B.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-23T02:19:05.718Z,1537669145.718 [MissionManager](INFO): Inserting Stack: Missions/Insert/StandardEnvelopes.xml
2018-09-23T02:19:05.775Z,1537669145.775 [MissionManager](INFO): DefineArg profile_station:StandardEnvelopes.MinAltitude = 5.000000 m
2018-09-23T02:19:05.779Z,1537669145.779 [MissionManager](INFO): DefineArg profile_station:StandardEnvelopes.MaxDepth = 200.000000 m
2018-09-23T02:19:05.794Z,1537669145.794 [MissionManager](INFO): DefineArg profile_station:StandardEnvelopes.MinOffshore = 2000.000000 m
2018-09-23T02:19:05.795Z,1537669145.795 [profile_station:StandardEnvelopes:A.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-23T02:19:05.804Z,1537669145.804 [profile_station:StandardEnvelopes:B.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-23T02:19:05.828Z,1537669145.828 [profile_station:StandardEnvelopes:C.OffshoreEnvelope](DEBUG): Construct OffshoreEnvelope.
2018-09-23T02:19:05.850Z,1537669145.850 [profile_station:I.Pitch](DEBUG): Construct.
2018-09-23T02:19:05.859Z,1537669145.859 [profile_station:J.Buoyancy](DEBUG): Construct Buoyancy.
2018-09-23T02:19:05.865Z,1537669145.865 [profile_station:K.SetSpeed](DEBUG): Construct.
2018-09-23T02:19:05.868Z,1537669145.868 [profile_station:L.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-23T02:19:05.883Z,1537669145.883 [profile_station:M.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-23T02:19:05.892Z,1537669145.892 [profile_station:N.YoYo](DEBUG): Construct YoYo.
2018-09-23T02:19:05.907Z,1537669145.907 [profile_station:CircleWrapper:B.Circle](DEBUG): Construct.
2018-09-23T02:19:05.991Z,1537669145.991 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Derivation="Tethys/Derivation"
       xmlns:Estimation="Tethys/Estimation"
       xmlns:Guidance="Tethys/Guidance"
       xmlns:Sensor="Tethys/Sensor"
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Derivation http://okeanids.mbari.org/tethys/Xml/Derivation.xsd
                           Tethys/Estimation http://okeanids.mbari.org/tethys/Xml/Estimation.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Sensor http://okeanids.mbari.org/tethys/Xml/Sensor.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="profile_station">

    <Description>
        This mission yoyos in a circle around a specified location.
    </Description>

<!-- Mission-wide settings -->

    <DefineArg Name="MissionTimeout"><Description>
        Maximum duration of mission
    </Description><Units:hour/><Value>4</Value></DefineArg>

    <DefineArg Name="NeedCommsTime"><Description>
        Elapsed time after previous surface communications when vehicle will
        begin to ascend for additional surface communications
    </Description><Units:minute/><Value>60</Value></DefineArg>

<!-- You probably need to change these. -->

    <DefineArg Name="Lat"><Description>
        The latitude of the center of the circle.
    </Description><Units:degree/><Value>36.806966</Value></DefineArg>

    <DefineArg Name="Lon"><Description>
        The longitude of the center of the circle.
    </Description><Units:degree/><Value>-121.824326</Value></DefineArg>

    <DefineArg Name="Radius"><Description>
        Radius to circle at
    </Description><Units:meter/><Value>300</Value></DefineArg>

<!-- You probably do not need to change these. -->

    <DefineArg Name="YoYoMinDepth"><Description>
        Minimum depth while performing the YoYo behavior.
    </Description><Units:meter/><Value>2</Value></DefineArg>

    <DefineArg Name="YoYoMaxDepth"><Description>
        Maximum depth while performing the YoYo behavior.
    </Description><Units:meter/><Value>200</Value></DefineArg>

    <DefineArg Name="YoYoMinAltitude"><Description>
        Minimum altitude while performing the YoYo behavior (for
        bottom-terminated YoYos).
    </Description><Units:meter/><Value>7</Value></DefineArg>

    <DefineArg Name="YoYoPitch"><Description>
        Pitch (plus and minus) for yo-yo behavior.
    </Description><Units:degree/><Value>20</Value></DefineArg>

    <DefineArg Name="Speed"><Description>
        Vehicle speed.
    </Description><Units:meter_per_second/><Value>1</Value></DefineArg>

<!-- You are even less likely to need to change these. -->

    <DefineArg Name="CircleMaxError"><Description>
        If this distance away from the circle, drive straight towards (or away
        from the center). Otherwise, try to reduce distance from the ideal
        circle.
    </Description><Units:meter/><Value>100</Value></DefineArg>

    <DefineArg Name="CircleTurnToPort"><Description>
        If true, vehicle turns to the left around the center point. If false,
        vehicle turns to the right.
    </Description><False/></DefineArg>

    <DefineArg Name="KwpHeading"><Description>
        Used to relax waypoint cross-track error constant that is adjusted for
        docking. (You can override this setting by passing an argument.)
    </Description><Units:radian_per_meter/><Value>0.010</Value></DefineArg>

    <DefineArg Name="MinAltitude"><Description>
        Minimum height above the sea floor for the entire mission.
    </Description><Units:meter/><Value>5</Value></DefineArg>

    <DefineArg Name="MaxDepth"><Description>
        Maximum depth for the entire mission.
    </Description><Units:meter/><Value>205</Value></DefineArg>

    <DefineArg Name="MinOffshore"><Description>
        Minimum offshore distance for the entire mission.
    </Description><Units:kilometer/><Value>2</Value></DefineArg>

<!-- Missions should almost always start with a timeout -->

    <Timeout Duration="MissionTimeout"/>

    <Insert Filename="Insert/Science.xml">
        <Description>
            Most missions will run the science sensors. If you don't place this
            aggregate above NeedComms, science instruments get turned off on the
            last upcast and while floating on the surface.
        </Description>
        <RedefineArg Name="SampleISUS"><True/></RedefineArg>
        <RedefineArg Name="PeakDetectChlActive"><True/></RedefineArg>
    </Insert>

<!-- Most missions should use the NeedComms aggregate. -->

    <Insert Filename="Insert/NeedComms.xml" Id="NeedComms"/>

    <Assign><Sequence/><Arg Name="NeedComms:DiveInterval"/><Arg Name="NeedCommsTime"/></Assign>

<!-- Missions should almost always start with standard safety envelopes; most missions should not expose the parameters of these envelopes. -->

    <Insert Filename="Insert/StandardEnvelopes.xml"/>

    <Assign><Sequence/><Arg Name="StandardEnvelopes:MinAltitude"/><Arg Name="MinAltitude"/></Assign>

    <Assign><Sequence/><Arg Name="StandardEnvelopes:MaxDepth"/><Arg Name="MaxDepth"/></Assign>

    <Assign><Sequence/><Arg Name="StandardEnvelopes:MinOffshore"/><Arg Name="MinOffshore"/></Assign>

<!-- Check for additional instructions first. -->

    <Call Id="StartingMission" RefId="NeedComms"/>

<!-- Many missions will keep mass position and buoyancy volume fixed at defaults. -->

    <Guidance:Pitch>
        <Parallel/>
        <Setting><Guidance:Pitch.massPosition/><Control:VerticalControl.massDefault/></Setting>
    </Guidance:Pitch>

    <Guidance:Buoyancy>
        <Parallel/>
        <Setting><Guidance:Buoyancy.position/><Control:VerticalControl.buoyancyNeutral/></Setting>
    </Guidance:Buoyancy>

    <Guidance:SetSpeed>
        <Parallel/>
        <Setting><Guidance:SetSpeed.speed/><Arg Name="Speed"/></Setting>
    </Guidance:SetSpeed>

    <Guidance:DepthEnvelope>
        <Description>
            Another depth envelope for the YoYo behavior. This envelope should
            fall within the limits of the standard safety envelopes in
            Insert/StandardEnvelopes.xml in order to avoid commanding high pitch
            angles for depth-terminated YoYos.
        </Description>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.minDepth/><Arg Name="YoYoMinDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="YoYoMaxDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.pitch/><Arg Name="YoYoPitch"/></Setting>
    </Guidance:DepthEnvelope>

    <Guidance:AltitudeEnvelope>
        <Description>
            Another altitude envelope for the YoYo behavior. This envelope
            should fall within the limits of the standard safety envelopes in
            Insert/StandardEnvelopes.xml in order to avoid commanding high pitch
            angles for bottom-terminated YoYos.
        </Description>
        <Parallel/>
        <Setting><Guidance:AltitudeEnvelope.minAltitude/><Arg Name="YoYoMinAltitude"/></Setting>
        <Setting><Guidance:AltitudeEnvelope.pitch/><Arg Name="YoYoPitch"/></Setting>
    </Guidance:AltitudeEnvelope>

    <Guidance:YoYo>
        <Parallel/>
        <Setting><Guidance:YoYo.pitch/><Arg Name="YoYoPitch"/></Setting>
    </Guidance:YoYo>

    <Aggregate Id="CircleWrapper">

        <Sequence Repeat="4096"/>

        <Assign><Parallel/><Control:HorizontalControl.kwpHeading/><Arg Name="KwpHeading"/></Assign>

        <Guidance:Circle>
            <Sequence/>
            <Setting><Guidance:Circle.latitude/><Arg Name="Lat"/></Setting>
            <Setting><Guidance:Circle.longitude/><Arg Name="Lon"/></Setting>
            <Setting><Guidance:Circle.radius/><Arg Name="Radius"/></Setting>
            <Setting><Guidance:Circle.maxError/><Arg Name="CircleMaxError"/></Setting>
            <Setting><Guidance:Circle.turnToPort/><Arg Name="CircleTurnToPort"/></Setting>
        </Guidance:Circle>

    </Aggregate>

</Mission>


2018-09-23T02:19:06.023Z,1537669146.023 [MissionManager](IMPORTANT): Resuming from info in Logs/20180922T190757/Science_profile_station_xml.state
2018-09-23T02:19:06.088Z,1537669146.088 [MissionManager](INFO): Default->Default:CheckIn/0
2018-09-23T02:19:06.097Z,1537669146.097 [MissionManager](INFO): Default:A.Wait->null/0
2018-09-23T02:19:06.097Z,1537669146.097 [MissionManager](INFO): Default:B.GoToSurface->null/0
2018-09-23T02:19:06.098Z,1537669146.098 [MissionManager](INFO): Default:CheckIn->Default:CheckIn:C.Wait/1
2018-09-23T02:19:06.098Z,1537669146.098 [MissionManager](INFO): Default:CheckIn:Read_GPS->null/0
2018-09-23T02:19:06.099Z,1537669146.099 [MissionManager](INFO): Default:CheckIn:Read_Iridium->null/0
2018-09-23T02:19:06.099Z,1537669146.099 [MissionManager](INFO): Default:CheckIn:C.Wait->null/0
2018-09-23T02:19:06.099Z,1537669146.099 [MissionManager](INFO): Default:CheckIn:D->null/0
2018-09-23T02:19:06.100Z,1537669146.100 [MissionManager](INFO): Default:CheckIn:E->null/0
2018-09-23T02:19:06.100Z,1537669146.100 [MissionManager](INFO): profile_station->profile_station:CircleWrapper/0
2018-09-23T02:19:06.109Z,1537669146.109 [MissionManager](INFO): profile_station:Science:PeakDetectChl->profile_station:Science:PeakDetectChl:A.PeakDetectVsDepth/0
2018-09-23T02:19:06.109Z,1537669146.109 [MissionManager](INFO): profile_station:Science:PeakDetectChl:A.PeakDetectVsDepth->null/0
2018-09-23T02:19:06.110Z,1537669146.110 [MissionManager](INFO): profile_station:Science:HighestChlPeakReport->profile_station:Science:HighestChlPeakReport:A.PeakDetectHorizontal/0
2018-09-23T02:19:06.110Z,1537669146.110 [MissionManager](INFO): profile_station:Science:HighestChlPeakReport:A.PeakDetectHorizontal->null/0
2018-09-23T02:19:06.111Z,1537669146.111 [MissionManager](INFO): profile_station:Science:PeakDetectNO3->profile_station:Science:PeakDetectNO3:A.PeakDetectVsDepth/0
2018-09-23T02:19:06.111Z,1537669146.111 [MissionManager](INFO): profile_station:Science:PeakDetectNO3:A.PeakDetectVsDepth->null/0
2018-09-23T02:19:06.112Z,1537669146.112 [MissionManager](INFO): profile_station:Science:PeakDetectOil->profile_station:Science:PeakDetectOil:A.PeakDetectVsDepth/0
2018-09-23T02:19:06.112Z,1537669146.112 [MissionManager](INFO): profile_station:Science:PeakDetectOil:A.PeakDetectVsDepth->null/0
2018-09-23T02:19:06.113Z,1537669146.113 [MissionManager](INFO): profile_station:NeedComms->null/0
2018-09-23T02:19:06.114Z,1537669146.114 [MissionManager](INFO): profile_station:NeedComms:A->null/0
2018-09-23T02:19:06.114Z,1537669146.114 [MissionManager](INFO): profile_station:NeedComms:B.GoToSurface->null/0
2018-09-23T02:19:06.114Z,1537669146.114 [MissionManager](INFO): profile_station:NeedComms:C->null/0
2018-09-23T02:19:06.115Z,1537669146.115 [MissionManager](INFO): profile_station:NeedComms:D->null/0
2018-09-23T02:19:06.115Z,1537669146.115 [MissionManager](INFO): profile_station:NeedComms:E->null/0
2018-09-23T02:19:06.116Z,1537669146.116 [MissionManager](INFO): profile_station:C->null/0
2018-09-23T02:19:06.116Z,1537669146.116 [MissionManager](INFO): profile_station:E->null/0
2018-09-23T02:19:06.117Z,1537669146.117 [MissionManager](INFO): profile_station:F->null/0
2018-09-23T02:19:06.133Z,1537669146.133 [MissionManager](INFO): profile_station:G->null/0
2018-09-23T02:19:06.134Z,1537669146.134 [MissionManager](INFO): profile_station:StartingMission->null/0
2018-09-23T02:19:06.134Z,1537669146.134 [MissionManager](INFO): profile_station:CircleWrapper->profile_station:CircleWrapper:B.Circle/2
2018-09-23T02:19:06.134Z,1537669146.134 [MissionManager](INFO): profile_station:CircleWrapper:B.Circle->null/0
2018-09-23T02:19:06.135Z,1537669146.135 [CommandLine](IMPORTANT): Resuming mission and schedule
2018-09-23T02:19:06.135Z,1537669146.135 [CommandLine](IMPORTANT): Scheduling is resumed
2018-09-23T02:19:06.136Z,1537669146.136 [CommandLine](IMPORTANT): Scheduled #7 (#1 of 2 with id='4zrhm'): "load Science/profile_station.xml;set profile_station.MissionTimeout 3 hour;set profile_station.NeedCommsTime 45 minute;set profile_station.Lat 36.8342 degree;set profile_station.Lon -121.898 degree"
2018-09-23T02:19:06.137Z,1537669146.137 [CommandLine](IMPORTANT): Scheduled #8 (#2 of 2 with id='4zrhm'): "set profile_station.YoYoMaxDepth 20 meter;set profile_station.MaxDepth 30 meter;run "
2018-09-23T02:19:06.508Z,1537669146.508 [Default] Stopped
2018-09-23T02:19:06.509Z,1537669146.509 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-23T02:19:06.509Z,1537669146.509 [Default:B.GoToSurface] Stopped
2018-09-23T02:19:06.509Z,1537669146.509 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-23T02:19:06.509Z,1537669146.509 [Default:CheckIn] Stopped
2018-09-23T02:19:06.509Z,1537669146.509 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-23T02:19:06.509Z,1537669146.509 [Default:CheckIn:C.Wait] Stopped
2018-09-23T02:19:06.509Z,1537669146.509 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-23T02:19:06.509Z,1537669146.509 [MissionManager](IMPORTANT): Started mission profile_station
2018-09-23T02:19:06.510Z,1537669146.510 [profile_station] Running Loop=1
2018-09-23T02:19:06.510Z,1537669146.510 [profile_station](DEBUG): Aggregate::initialize profile_station
2018-09-23T02:19:06.510Z,1537669146.510 [profile_station:Science] Running Loop=1
2018-09-23T02:19:06.510Z,1537669146.510 [profile_station:Science](DEBUG): Aggregate::initialize profile_station:Science
2018-09-23T02:19:06.510Z,1537669146.510 [profile_station:Science:A] Running Loop=1
2018-09-23T02:19:06.510Z,1537669146.510 [profile_station:Science:B] Running Loop=1
2018-09-23T02:19:06.510Z,1537669146.510 [profile_station:Science:C] Running Loop=1
2018-09-23T02:19:06.511Z,1537669146.511 [profile_station:Science:D] Running Loop=1
2018-09-23T02:19:06.511Z,1537669146.511 [profile_station:Science:E] Running Loop=1
2018-09-23T02:19:06.511Z,1537669146.511 [profile_station:Science:F] Running Loop=1
2018-09-23T02:19:06.511Z,1537669146.511 [profile_station:Science:G] Running Loop=1
2018-09-23T02:19:06.511Z,1537669146.511 [profile_station:Science:Read_Oil] Running Loop=1
2018-09-23T02:19:06.511Z,1537669146.511 [profile_station:Science:PeakDetectChl] Running Loop=1
2018-09-23T02:19:06.511Z,1537669146.511 [profile_station:Science:PeakDetectChl](DEBUG): Aggregate::initialize profile_station:Science:PeakDetectChl
2018-09-23T02:19:06.511Z,1537669146.511 [profile_station:Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2018-09-23T02:19:06.511Z,1537669146.511 [profile_station:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-23T02:19:06.512Z,1537669146.512 [profile_station:Science:HighestChlPeakReport] Running Loop=1
2018-09-23T02:19:06.513Z,1537669146.513 [profile_station:Science:HighestChlPeakReport](DEBUG): Aggregate::initialize profile_station:Science:HighestChlPeakReport
2018-09-23T02:19:06.513Z,1537669146.513 [profile_station:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2018-09-23T02:19:06.513Z,1537669146.513 [profile_station:Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2018-09-23T02:19:06.513Z,1537669146.513 [profile_station:Science:PeakDetectNO3] Running Loop=1
2018-09-23T02:19:06.513Z,1537669146.513 [profile_station:Science:PeakDetectNO3](DEBUG): Aggregate::initialize profile_station:Science:PeakDetectNO3
2018-09-23T02:19:06.514Z,1537669146.514 [profile_station:Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2018-09-23T02:19:06.514Z,1537669146.514 [profile_station:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-23T02:19:06.515Z,1537669146.515 [profile_station:Science:PeakDetectOil] Running Loop=1
2018-09-23T02:19:06.515Z,1537669146.515 [profile_station:Science:PeakDetectOil](DEBUG): Aggregate::initialize profile_station:Science:PeakDetectOil
2018-09-23T02:19:06.515Z,1537669146.515 [profile_station:Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2018-09-23T02:19:06.515Z,1537669146.515 [profile_station:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-23T02:19:06.516Z,1537669146.516 [profile_station:StandardEnvelopes] Running Loop=1
2018-09-23T02:19:06.516Z,1537669146.516 [profile_station:StandardEnvelopes](DEBUG): Aggregate::initialize profile_station:StandardEnvelopes
2018-09-23T02:19:06.516Z,1537669146.516 [profile_station:StandardEnvelopes:A.AltitudeEnvelope] Running Loop=1
2018-09-23T02:19:06.516Z,1537669146.516 [profile_station:StandardEnvelopes:A.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-23T02:19:06.516Z,1537669146.516 [profile_station:StandardEnvelopes:B.DepthEnvelope] Running Loop=1
2018-09-23T02:19:06.516Z,1537669146.516 [profile_station:StandardEnvelopes:B.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-23T02:19:06.517Z,1537669146.517 [profile_station:StandardEnvelopes:C.OffshoreEnvelope] Running Loop=1
2018-09-23T02:19:06.517Z,1537669146.517 [profile_station:StandardEnvelopes:C.OffshoreEnvelope](DEBUG): Initialize OffshoreEnvelopeComponent.
2018-09-23T02:19:06.517Z,1537669146.517 [profile_station:I.Pitch] Running Loop=1
2018-09-23T02:19:06.517Z,1537669146.517 [profile_station:I.Pitch](DEBUG): Initialize.
2018-09-23T02:19:06.517Z,1537669146.517 [profile_station:J.Buoyancy] Running Loop=1
2018-09-23T02:19:06.517Z,1537669146.517 [profile_station:J.Buoyancy](DEBUG): Initialize Buoyancy Component.
2018-09-23T02:19:06.517Z,1537669146.517 [profile_station:K.SetSpeed] Running Loop=1
2018-09-23T02:19:06.517Z,1537669146.517 [profile_station:K.SetSpeed](DEBUG): Initialize.
2018-09-23T02:19:06.518Z,1537669146.518 [profile_station:L.DepthEnvelope] Running Loop=1
2018-09-23T02:19:06.518Z,1537669146.518 [profile_station:L.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-23T02:19:06.518Z,1537669146.518 [profile_station:M.AltitudeEnvelope] Running Loop=1
2018-09-23T02:19:06.518Z,1537669146.518 [profile_station:M.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-23T02:19:06.518Z,1537669146.518 [profile_station:N.YoYo] Running Loop=1
2018-09-23T02:19:06.518Z,1537669146.518 [profile_station:N.YoYo](DEBUG): Initialize YoYoComponent.
2018-09-23T02:19:06.518Z,1537669146.518 [profile_station:CircleWrapper] Running Loop=3
2018-09-23T02:19:06.519Z,1537669146.519 [profile_station:CircleWrapper](DEBUG): Aggregate::initialize profile_station:CircleWrapper
2018-09-23T02:19:06.519Z,1537669146.519 [profile_station:CircleWrapper:A] Running Loop=1
2018-09-23T02:19:06.519Z,1537669146.519 [profile_station:CircleWrapper:B.Circle] Running Loop=1
2018-09-23T02:19:06.519Z,1537669146.519 [profile_station:CircleWrapper:B.Circle](DEBUG): Initialize CircleComponent.
2018-09-23T02:19:06.522Z,1537669146.522 [profile_station:CircleWrapper:A] Running Loop=1
2018-09-23T02:19:06.523Z,1537669146.523 [profile_station:N.YoYo] Running Loop=1
2018-09-23T02:19:06.524Z,1537669146.524 [profile_station:M.AltitudeEnvelope] Running Loop=1
2018-09-23T02:19:06.525Z,1537669146.525 [profile_station:L.DepthEnvelope] Running Loop=1
2018-09-23T02:19:06.527Z,1537669146.527 [profile_station:K.SetSpeed] Running Loop=1
2018-09-23T02:19:06.528Z,1537669146.528 [profile_station:J.Buoyancy] Running Loop=1
2018-09-23T02:19:06.529Z,1537669146.529 [profile_station:I.Pitch] Running Loop=1
2018-09-23T02:19:06.530Z,1537669146.530 [profile_station:StandardEnvelopes] Running Loop=1
2018-09-23T02:19:06.530Z,1537669146.530 [profile_station:StandardEnvelopes:C.OffshoreEnvelope] Running Loop=1
2018-09-23T02:19:06.531Z,1537669146.531 [profile_station:StandardEnvelopes:B.DepthEnvelope] Running Loop=1
2018-09-23T02:19:06.532Z,1537669146.532 [profile_station:StandardEnvelopes:A.AltitudeEnvelope] Running Loop=1
2018-09-23T02:19:06.562Z,1537669146.562 [profile_station:Science] Running Loop=1
2018-09-23T02:19:06.564Z,1537669146.564 [profile_station:Science:PeakDetectOil] Stopped
2018-09-23T02:19:06.577Z,1537669146.577 [profile_station:Science:PeakDetectOil](DEBUG): Aggregate::uninitialize profile_station:Science:PeakDetectOil
2018-09-23T02:19:06.577Z,1537669146.577 [profile_station:Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2018-09-23T02:19:06.577Z,1537669146.577 [profile_station:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-23T02:19:06.577Z,1537669146.577 [profile_station:Science:PeakDetectNO3] Stopped
2018-09-23T02:19:06.577Z,1537669146.577 [profile_station:Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize profile_station:Science:PeakDetectNO3
2018-09-23T02:19:06.577Z,1537669146.577 [profile_station:Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2018-09-23T02:19:06.577Z,1537669146.577 [profile_station:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-23T02:19:06.577Z,1537669146.577 [profile_station:Science:HighestChlPeakReport] Stopped
2018-09-23T02:19:06.578Z,1537669146.578 [profile_station:Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize profile_station:Science:HighestChlPeakReport
2018-09-23T02:19:06.578Z,1537669146.578 [profile_station:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2018-09-23T02:19:06.578Z,1537669146.578 [profile_station:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-23T02:19:06.578Z,1537669146.578 [profile_station:Science:PeakDetectChl] Running Loop=1
2018-09-23T02:19:06.579Z,1537669146.579 [profile_station:Science:Read_Oil] Running Loop=1
2018-09-23T02:19:06.579Z,1537669146.579 [profile_station:Science:Read_Oil](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-23T02:19:06.580Z,1537669146.580 [profile_station:Science:G] Running Loop=1
2018-09-23T02:19:06.581Z,1537669146.581 [profile_station:Science:G](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-23T02:19:06.582Z,1537669146.582 [profile_station:Science:F] Stopped
2018-09-23T02:19:06.582Z,1537669146.582 [profile_station:Science:E] Stopped
2018-09-23T02:19:06.582Z,1537669146.582 [profile_station:Science:D] Stopped
2018-09-23T02:19:06.582Z,1537669146.582 [profile_station:Science:C] Stopped
2018-09-23T02:19:06.582Z,1537669146.582 [profile_station:Science:B] Stopped
2018-09-23T02:19:06.582Z,1537669146.582 [profile_station:Science:A] Stopped
2018-09-23T02:19:06.769Z,1537669146.769 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-23T02:19:06.769Z,1537669146.769 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-23T02:19:29.295Z,1537669169.295 [Radio_Surface](INFO): Powering down
2018-09-23T02:20:31.392Z,1537669231.392 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:20:48.264Z,1537669248.264 [RDI_Pathfinder](ERROR): Failed to parse:
0e8d,0ffe,*14.167,*-0.133,*0.000
2018-09-23T02:21:31.792Z,1537669291.792 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:22:05.393Z,1537669325.393 [DataOverHttps](INFO): setting unavailable, lastComms_.elapsed()=180.134888
2018-09-23T02:22:59.446Z,1537669379.446 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-23T02:22:59.446Z,1537669379.446 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092219283348,35.0, -0.1,   .9,  0
2018-09-23T02:23:32.212Z,1537669412.212 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:24:31.831Z,1537669471.831 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:25:32.257Z,1537669532.257 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:26:11.082Z,1537669571.082 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-23T02:26:11.082Z,1537669571.082 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,180922195.0, -0.1,   0.0,1448.9,  0
2018-09-23T02:26:32.612Z,1537669592.612 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:26:39.455Z,1537669599.455 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-23T02:26:39.455Z,1537669599.455 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768V
2018-09-23T02:27:31.456Z,1537669651.456 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-23T02:27:31.456Z,1537669651.456 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092219330548,35.0, -0.1,   0.0  0
2018-09-23T02:27:33.026Z,1537669653.026 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:27:33.461Z,1537669653.461 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-32768,V
2018-09-23T02:28:21.437Z,1537669701.437 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-23T02:28:21.437Z,1537669701.437 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,32768,-327S,-32768,-32768,-32768,V
2018-09-23T02:28:33.012Z,1537669713.012 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:29:19.458Z,1537669759.458 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-23T02:29:19.459Z,1537669759.459 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,32768,V
2018-09-23T02:29:33.012Z,1537669773.012 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:30:19.461Z,1537669819.461 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-23T02:30:19.462Z,1537669819.462 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092219355348,35.0, -0.1,   0.0,1448:BI,32768,-32768,-32768,V
2018-09-23T02:30:33.417Z,1537669833.417 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:31:29.487Z,1537669889.487 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-23T02:31:29.487Z,1537669889.487 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092219370348,35.   0.0,1448.9,  0
2018-09-23T02:31:33.412Z,1537669893.412 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:32:33.812Z,1537669953.812 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:33:33.852Z,1537670013.852 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:34:34.252Z,1537670074.252 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:34:55.236Z,1537670095.236 [WetLabsSeaOWL_UV_A](DEBUG): Error parsing data: SEAOWLA2K-019	3819	239	1959	1	277	2329	2329	3269	3269	77	321	321

2018-09-23T02:35:34.252Z,1537670134.252 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:36:34.252Z,1537670194.252 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:37:35.052Z,1537670255.052 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:38:35.056Z,1537670315.056 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:39:35.464Z,1537670375.464 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:40:35.464Z,1537670435.464 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:41:35.472Z,1537670495.472 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:42:35.872Z,1537670555.872 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:43:35.872Z,1537670615.872 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:44:36.291Z,1537670676.291 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:45:36.688Z,1537670736.688 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:46:37.088Z,1537670797.088 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:47:37.090Z,1537670857.090 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:48:37.499Z,1537670917.499 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:49:37.490Z,1537670977.490 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:50:37.488Z,1537671037.488 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:51:37.491Z,1537671097.491 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:52:37.888Z,1537671157.888 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:53:38.288Z,1537671218.288 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:54:38.688Z,1537671278.688 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:55:18.774Z,1537671318.774 [profile_station:CircleWrapper:B.Circle] Stopped
2018-09-23T02:55:18.774Z,1537671318.774 [profile_station:CircleWrapper:B.Circle](DEBUG): Uninitialize.
2018-09-23T02:55:18.775Z,1537671318.775 [profile_station:CircleWrapper](INFO): Completed profile_station:CircleWrapper
2018-09-23T02:55:18.775Z,1537671318.775 [profile_station:CircleWrapper] Stopped
2018-09-23T02:55:18.776Z,1537671318.776 [profile_station:CircleWrapper](DEBUG): Aggregate::uninitialize profile_station:CircleWrapper
2018-09-23T02:55:18.776Z,1537671318.776 [profile_station:CircleWrapper:A] Stopped
2018-09-23T02:55:18.776Z,1537671318.776 [profile_station:CircleWrapper](INFO): Running loop #4
2018-09-23T02:55:18.776Z,1537671318.776 [profile_station:CircleWrapper] Running Loop=4
2018-09-23T02:55:18.776Z,1537671318.776 [profile_station:CircleWrapper](DEBUG): Aggregate::initialize profile_station:CircleWrapper
2018-09-23T02:55:18.776Z,1537671318.776 [profile_station:CircleWrapper:A] Running Loop=1
2018-09-23T02:55:18.776Z,1537671318.776 [profile_station:CircleWrapper:B.Circle] Running Loop=1
2018-09-23T02:55:18.776Z,1537671318.776 [profile_station:CircleWrapper:B.Circle](DEBUG): Initialize CircleComponent.
2018-09-23T02:55:38.688Z,1537671338.688 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:56:39.091Z,1537671399.091 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:57:39.093Z,1537671459.093 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:58:39.488Z,1537671519.488 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T02:59:39.493Z,1537671579.493 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:00:39.559Z,1537671639.559 [profile_station:NeedComms] Running Loop=1
2018-09-23T03:00:39.560Z,1537671639.560 [profile_station:NeedComms](DEBUG): Aggregate::initialize profile_station:NeedComms
2018-09-23T03:00:39.560Z,1537671639.560 [profile_station:NeedComms:B.GoToSurface] Running Loop=1
2018-09-23T03:00:39.560Z,1537671639.560 [profile_station:NeedComms:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T03:00:39.560Z,1537671639.560 [profile_station:NeedComms:B.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-23T03:00:39.565Z,1537671639.565 [profile_station:NeedComms:B.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-23T03:00:39.565Z,1537671639.565 [profile_station:NeedComms:B.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-23T03:00:39.566Z,1537671639.566 [profile_station:NeedComms:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T03:00:39.566Z,1537671639.566 [profile_station:NeedComms:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T03:00:39.567Z,1537671639.567 [profile_station:NeedComms:A] Running Loop=1
2018-09-23T03:00:39.574Z,1537671639.574 [profile_station:NeedComms:A](INFO): last time_fix was: 1537668928.000000 second since 1970/01/01T00:00:00Z 
2018-09-23T03:00:39.577Z,1537671639.577 [profile_station:NeedComms:A] Stopped
2018-09-23T03:00:39.896Z,1537671639.896 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:01:37.272Z,1537671697.272 [profile_station:NeedComms:C] Running Loop=1
2018-09-23T03:01:37.396Z,1537671697.396 [Radio_Surface](INFO): Powering up
2018-09-23T03:01:37.675Z,1537671697.675 [profile_station:NeedComms:C](DEBUG): Initialize ReadDataComponent to sense time_fix
2018-09-23T03:01:38.001Z,1537671698.001 [NAL9602](INFO): Powering up
2018-09-23T03:01:39.825Z,1537671699.825 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:01:47.820Z,1537671707.820 [BuoyancyServo](ERROR): getPosition uart error serial timeout
2018-09-23T03:01:47.820Z,1537671707.820 [BuoyancyServo](FAULT): Buoyancy getPosition uart error.serial timeout
2018-09-23T03:01:47.820Z,1537671707.820 [BuoyancyServo] Communications Fault, FailCount= 1
2018-09-23T03:01:47.820Z,1537671707.820 [BuoyancyServo](ERROR): Communications Fault
2018-09-23T03:01:47.828Z,1537671707.828 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-09-23T03:01:47.960Z,1537671707.960 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-23T03:01:47.965Z,1537671707.965 [BuoyancyServo](INFO): Powering down
2018-09-23T03:01:49.080Z,1537671709.080 [NAL9602](INFO): NAL9602 initialized
2018-09-23T03:01:49.533Z,1537671709.533 [BuoyancyServo](FAULT): LCB fault:  Current Limiter Activated.
2018-09-23T03:01:49.534Z,1537671709.534 [BuoyancyServo] Hardware Fault, FailCount= 1
2018-09-23T03:01:49.534Z,1537671709.534 [BuoyancyServo](ERROR): Hardware Fault
2018-09-23T03:01:49.955Z,1537671709.955 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-23T03:01:49.955Z,1537671709.955 [BuoyancyServo] No Fault, FailCount= 1
2018-09-23T03:01:50.403Z,1537671710.403 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-23T03:01:50.518Z,1537671710.518 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-23T03:02:19.491Z,1537671739.491 [BPC1](INFO): Calculating totals. Valid battery stick count: 56. Valid reserve battery stick count: 6.
2018-09-23T03:02:39.854Z,1537671759.854 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:03:01.456Z,1537671781.456 [NAL9602](INFO): SBD MO Status=0, MOMSN=1195, MT Status=0, MTMSN=0
2018-09-23T03:03:01.456Z,1537671781.456 [NAL9602](INFO): No messages in MT queue
2018-09-23T03:03:02.654Z,1537671782.654 [NAL9602](INFO): GPS fix at 20180923T030251: (36.838196, -121.896623)
2018-09-23T03:03:02.735Z,1537671782.735 [UniversalFixResidualReporter](INFO): Fix residual: 18.3 %DT, over the last 2429.1 m. Residual distance 443.9 m at bearing 156.8 degrees. Fix at (36.8382, -121.8966) with 52.0 m made good.
2018-09-23T03:03:02.737Z,1537671782.737 [profile_station:CircleWrapper:B.Circle] Stopped
2018-09-23T03:03:02.741Z,1537671782.741 [profile_station:CircleWrapper:B.Circle](DEBUG): Uninitialize.
2018-09-23T03:03:02.742Z,1537671782.742 [profile_station:CircleWrapper](INFO): Completed profile_station:CircleWrapper
2018-09-23T03:03:02.742Z,1537671782.742 [profile_station:CircleWrapper] Stopped
2018-09-23T03:03:02.742Z,1537671782.742 [profile_station:CircleWrapper](DEBUG): Aggregate::uninitialize profile_station:CircleWrapper
2018-09-23T03:03:02.742Z,1537671782.742 [profile_station:CircleWrapper:A] Stopped
2018-09-23T03:03:02.742Z,1537671782.742 [profile_station:CircleWrapper](INFO): Running loop #5
2018-09-23T03:03:02.742Z,1537671782.742 [profile_station:CircleWrapper] Running Loop=5
2018-09-23T03:03:02.742Z,1537671782.742 [profile_station:CircleWrapper](DEBUG): Aggregate::initialize profile_station:CircleWrapper
2018-09-23T03:03:02.743Z,1537671782.743 [profile_station:CircleWrapper:A] Running Loop=1
2018-09-23T03:03:02.743Z,1537671782.743 [profile_station:CircleWrapper:B.Circle] Running Loop=1
2018-09-23T03:03:02.743Z,1537671782.743 [profile_station:CircleWrapper:B.Circle](DEBUG): Initialize CircleComponent.
2018-09-23T03:03:02.752Z,1537671782.752 [profile_station:NeedComms:C] Stopped
2018-09-23T03:03:02.752Z,1537671782.752 [profile_station:NeedComms:D] Running Loop=1
2018-09-23T03:03:03.159Z,1537671783.159 [profile_station:NeedComms:D](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-23T03:03:20.206Z,1537671800.206 [NAL9602](INFO): SBD MO Status=1, MOMSN=1196, MT Status=0, MTMSN=0
2018-09-23T03:03:20.255Z,1537671800.255 [NAL9602](INFO): Sent 89 bytes from file Logs/20180922T190757/Courier0102.lzma
2018-09-23T03:03:20.255Z,1537671800.255 [NAL9602](INFO): Packets left to send: 0
2018-09-23T03:03:20.257Z,1537671800.257 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Courier0102.lzma.parts/0000.sbd
2018-09-23T03:03:20.257Z,1537671800.257 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Courier0102.lzma
2018-09-23T03:03:25.595Z,1537671805.595 [RDI_Pathfinder](ERROR): Failed to parse:
    +0.00,        +0.00,        +0.00,   0.00,11750.85
2018-09-23T03:03:35.572Z,1537671815.572 [NAL9602](INFO): SBD MO Status=1, MOMSN=1197, MT Status=0, MTMSN=0
2018-09-23T03:03:35.621Z,1537671815.621 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0103.lzma
2018-09-23T03:03:35.621Z,1537671815.621 [NAL9602](INFO): Packets left to send: 7
2018-09-23T03:03:35.623Z,1537671815.623 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0103.lzma.parts/0007.sbd
2018-09-23T03:03:42.188Z,1537671822.188 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:03:48.994Z,1537671828.994 [NAL9602](INFO): SBD MO Status=1, MOMSN=1198, MT Status=0, MTMSN=0
2018-09-23T03:03:49.049Z,1537671829.049 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0103.lzma
2018-09-23T03:03:49.050Z,1537671829.050 [NAL9602](INFO): Packets left to send: 6
2018-09-23T03:03:49.051Z,1537671829.051 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0103.lzma.parts/0006.sbd
2018-09-23T03:04:07.652Z,1537671847.652 [NAL9602](INFO): SBD MO Status=2, MOMSN=1199, MT Status=2, MTMSN=0
2018-09-23T03:04:07.652Z,1537671847.652 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-23T03:04:33.449Z,1537671873.449 [NAL9602](INFO): SBD MO Status=2, MOMSN=1199, MT Status=2, MTMSN=0
2018-09-23T03:04:33.450Z,1537671873.450 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-23T03:04:42.244Z,1537671882.244 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:05:06.413Z,1537671906.413 [NAL9602](INFO): SBD MO Status=2, MOMSN=1199, MT Status=2, MTMSN=0
2018-09-23T03:05:06.413Z,1537671906.413 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-23T03:05:19.086Z,1537671919.086 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.002935
2018-09-23T03:05:23.383Z,1537671923.383 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180922T190757/Courier0105.lzma
2018-09-23T03:05:24.147Z,1537671924.147 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0105.lzma.bak
2018-09-23T03:05:24.147Z,1537671924.147 [DataOverHttps](INFO): SBD MOMSN=8564390
2018-09-23T03:05:29.659Z,1537671929.659 [NAL9602](INFO): SBD MO Status=2, MOMSN=1199, MT Status=2, MTMSN=0
2018-09-23T03:05:29.659Z,1537671929.659 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-23T03:05:33.656Z,1537671933.656 [DataOverHttps](INFO): Sending 2445 bytes from file Logs/20180922T190757/Express0103.lzma
2018-09-23T03:05:34.419Z,1537671934.419 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0103.lzma.bak
2018-09-23T03:05:34.419Z,1537671934.419 [DataOverHttps](INFO): SBD MOMSN=8564394
2018-09-23T03:05:43.764Z,1537671943.764 [DataOverHttps](INFO): Sending 280 bytes from file Logs/20180922T190757/Express0106.lzma
2018-09-23T03:05:44.536Z,1537671944.536 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0106.lzma.bak
2018-09-23T03:05:44.537Z,1537671944.537 [DataOverHttps](INFO): SBD MOMSN=8564406
2018-09-23T03:05:45.288Z,1537671945.288 [profile_station:NeedComms:D] Stopped
2018-09-23T03:05:45.288Z,1537671945.288 [profile_station:NeedComms:E] Running Loop=1
2018-09-23T03:05:45.455Z,1537671945.455 [profile_station:NeedComms:E](DEBUG): Initialize ReadDataComponent to sense time_fix
2018-09-23T03:05:49.057Z,1537671949.057 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for altitude
2018-09-23T03:05:49.057Z,1537671949.057 [RDI_Pathfinder](ERROR): Failed to parse:
:BD,        +0.00,     ,        +0.00,   0.00,11894.71
2018-09-23T03:05:49.791Z,1537671949.791 [NAL9602](INFO): GPS fix at 20180923T030539: (36.838377, -121.896819)
2018-09-23T03:05:49.878Z,1537671949.878 [profile_station:NeedComms:E] Stopped
2018-09-23T03:05:49.879Z,1537671949.879 [profile_station:NeedComms](INFO): Completed profile_station:NeedComms
2018-09-23T03:05:49.879Z,1537671949.879 [profile_station:NeedComms] Stopped
2018-09-23T03:05:49.879Z,1537671949.879 [profile_station:NeedComms](DEBUG): Aggregate::uninitialize profile_station:NeedComms
2018-09-23T03:05:49.879Z,1537671949.879 [profile_station:NeedComms:B.GoToSurface] Stopped
2018-09-23T03:05:49.879Z,1537671949.879 [profile_station:NeedComms:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-23T03:06:21.766Z,1537671981.766 [NAL9602](INFO): Powering down
2018-09-23T03:06:33.282Z,1537671993.282 [Radio_Surface](INFO): Powering down
2018-09-23T03:07:15.376Z,1537672035.376 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:07:31.411Z,1537672051.411 [RDI_Pathfinder](ERROR): Failed to parse:
68,-32768,-32768,-32768,V
2018-09-23T03:07:41.411Z,1537672061.411 [RDI_Pathfinder](ERROR): Failed to parse:
:HM,G,D,0e8d,0ffe, 14.093, -0.152, 0.000
2018-09-23T03:07:43.408Z,1537672063.408 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-32768,V
2018-09-23T03:08:15.383Z,1537672095.383 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:08:39.057Z,1537672119.057 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-23T03:08:39.057Z,1537672119.057 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-3276,-32768,V
2018-09-23T03:08:49.776Z,1537672129.776 [DataOverHttps](INFO): setting unavailable, lastComms_.elapsed()=180.001938
2018-09-23T03:10:15.778Z,1537672215.778 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:11:16.176Z,1537672276.176 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:12:11.034Z,1537672331.034 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-23T03:12:11.034Z,1537672331.034 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-2768,V
2018-09-23T03:12:16.179Z,1537672336.179 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:13:16.576Z,1537672396.576 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:13:19.397Z,1537672399.397 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-23T03:13:19.398Z,1537672399.398 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092220185348,35.0, -0.1, 48.9,  0
2018-09-23T03:14:16.988Z,1537672456.988 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:15:16.984Z,1537672516.984 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:16:16.986Z,1537672576.986 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:17:17.004Z,1537672637.004 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:18:17.407Z,1537672697.407 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:19:17.404Z,1537672757.404 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:20:17.404Z,1537672817.404 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:21:17.808Z,1537672877.808 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:22:17.804Z,1537672937.804 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:23:18.204Z,1537672998.204 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:24:18.204Z,1537673058.204 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:25:18.604Z,1537673118.604 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:26:19.028Z,1537673179.028 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:27:19.052Z,1537673239.052 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:28:19.819Z,1537673299.819 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:29:19.825Z,1537673359.825 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:30:19.836Z,1537673419.836 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:31:19.836Z,1537673479.836 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:32:19.844Z,1537673539.844 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:33:20.241Z,1537673600.241 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:34:21.036Z,1537673661.036 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:35:20.649Z,1537673720.649 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:36:20.649Z,1537673780.649 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:37:21.040Z,1537673841.040 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:38:21.067Z,1537673901.067 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:39:21.440Z,1537673961.440 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:40:21.840Z,1537674021.840 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:41:22.243Z,1537674082.243 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:42:00.311Z,1537674120.311 [profile_station:CircleWrapper:B.Circle] Stopped
2018-09-23T03:42:00.311Z,1537674120.311 [profile_station:CircleWrapper:B.Circle](DEBUG): Uninitialize.
2018-09-23T03:42:00.312Z,1537674120.312 [profile_station:CircleWrapper](INFO): Completed profile_station:CircleWrapper
2018-09-23T03:42:00.312Z,1537674120.312 [profile_station:CircleWrapper] Stopped
2018-09-23T03:42:00.312Z,1537674120.312 [profile_station:CircleWrapper](DEBUG): Aggregate::uninitialize profile_station:CircleWrapper
2018-09-23T03:42:00.312Z,1537674120.312 [profile_station:CircleWrapper:A] Stopped
2018-09-23T03:42:00.312Z,1537674120.312 [profile_station:CircleWrapper](INFO): Running loop #6
2018-09-23T03:42:00.312Z,1537674120.312 [profile_station:CircleWrapper] Running Loop=6
2018-09-23T03:42:00.312Z,1537674120.312 [profile_station:CircleWrapper](DEBUG): Aggregate::initialize profile_station:CircleWrapper
2018-09-23T03:42:00.312Z,1537674120.312 [profile_station:CircleWrapper:A] Running Loop=1
2018-09-23T03:42:00.312Z,1537674120.312 [profile_station:CircleWrapper:B.Circle] Running Loop=1
2018-09-23T03:42:00.313Z,1537674120.313 [profile_station:CircleWrapper:B.Circle](DEBUG): Initialize CircleComponent.
2018-09-23T03:42:22.239Z,1537674142.239 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:43:22.640Z,1537674202.640 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:44:22.643Z,1537674262.643 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:45:22.644Z,1537674322.644 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:46:23.044Z,1537674383.044 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:47:22.660Z,1537674442.660 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:48:17.504Z,1537674497.504 [RDI_Pathfinder](ERROR): Failed to parse:

2018-09-23T03:48:22.664Z,1537674502.664 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:49:23.060Z,1537674563.060 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:50:23.460Z,1537674623.460 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:50:49.919Z,1537674649.919 [profile_station:NeedComms] Running Loop=1
2018-09-23T03:50:49.919Z,1537674649.919 [profile_station:NeedComms](DEBUG): Aggregate::initialize profile_station:NeedComms
2018-09-23T03:50:49.919Z,1537674649.919 [profile_station:NeedComms:B.GoToSurface] Running Loop=1
2018-09-23T03:50:49.919Z,1537674649.919 [profile_station:NeedComms:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T03:50:49.919Z,1537674649.919 [profile_station:NeedComms:B.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-23T03:50:49.920Z,1537674649.920 [profile_station:NeedComms:B.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-23T03:50:49.921Z,1537674649.921 [profile_station:NeedComms:B.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-23T03:50:49.922Z,1537674649.922 [profile_station:NeedComms:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T03:50:49.923Z,1537674649.923 [profile_station:NeedComms:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T03:50:49.926Z,1537674649.926 [profile_station:NeedComms:A] Running Loop=1
2018-09-23T03:50:49.951Z,1537674649.951 [profile_station:NeedComms:A](INFO): last time_fix was: 1537671939.000000 second since 1970/01/01T00:00:00Z 
2018-09-23T03:50:49.952Z,1537674649.952 [profile_station:NeedComms:A] Stopped
2018-09-23T03:51:23.579Z,1537674683.579 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T03:51:31.506Z,1537674691.506 [profile_station:NeedComms:C] Running Loop=1
2018-09-23T03:51:31.734Z,1537674691.734 [Radio_Surface](INFO): Powering up
2018-09-23T03:51:32.223Z,1537674692.223 [NAL9602](INFO): Powering up
2018-09-23T03:51:42.061Z,1537674702.061 [BuoyancyServo](ERROR): getPosition uart error serial timeout
2018-09-23T03:51:42.061Z,1537674702.061 [BuoyancyServo](FAULT): Buoyancy getPosition uart error.serial timeout
2018-09-23T03:51:42.061Z,1537674702.061 [BuoyancyServo] Communications Fault, FailCount= 2
2018-09-23T03:51:42.061Z,1537674702.061 [BuoyancyServo](ERROR): Communications Fault
2018-09-23T03:51:42.145Z,1537674702.145 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-09-23T03:51:42.285Z,1537674702.285 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-23T03:51:42.286Z,1537674702.286 [BuoyancyServo](INFO): Powering down
2018-09-23T03:51:43.366Z,1537674703.366 [NAL9602](INFO): NAL9602 initialized
2018-09-23T03:51:43.887Z,1537674703.887 [BuoyancyServo](FAULT): LCB fault:  Current Limiter Activated.
2018-09-23T03:51:43.888Z,1537674703.888 [BuoyancyServo] Hardware Fault, FailCount= 2
2018-09-23T03:51:43.888Z,1537674703.888 [BuoyancyServo](ERROR): Hardware Fault
2018-09-23T03:51:44.304Z,1537674704.304 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-23T03:51:44.305Z,1537674704.305 [BuoyancyServo] No Fault, FailCount= 2
2018-09-23T03:51:44.672Z,1537674704.672 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-23T03:51:44.790Z,1537674704.790 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-23T03:52:13.789Z,1537674733.789 [NAL9602](INFO): SBD MO Status=2, MOMSN=1199, MT Status=2, MTMSN=0
2018-09-23T03:52:13.790Z,1537674733.790 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-23T03:52:21.417Z,1537674741.417 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.009433
2018-09-23T03:52:31.404Z,1537674751.404 [NAL9602](IMPORTANT): SBD MO Status=0, MOMSN=1199, MT Status=1, MTMSN=53
2018-09-23T03:52:31.404Z,1537674751.404 [NAL9602](INFO): Data available in MT queue
2018-09-23T03:52:31.885Z,1537674751.885 [NAL9602](INFO): Received command:stop
2018-09-23T03:52:31.946Z,1537674751.946 [CommandLine](IMPORTANT): got command stop
2018-09-23T03:52:31.947Z,1537674751.947 [CommandLine](IMPORTANT): Scheduling is paused for 2 commands
2018-09-23T03:52:31.947Z,1537674751.947 [Supervisor](INFO): Stop Mission called by CommandLine::commandStop
2018-09-23T03:52:31.968Z,1537674751.968 [MissionManager](INFO): MissionManager is completed.
2018-09-23T03:52:31.968Z,1537674751.968 [MissionManager](INFO): Uninitializing Mission profile_station
2018-09-23T03:52:31.968Z,1537674751.968 [profile_station] Stopped
2018-09-23T03:52:31.968Z,1537674751.968 [profile_station](DEBUG): Aggregate::uninitialize profile_station
2018-09-23T03:52:31.968Z,1537674751.968 [profile_station:Science] Stopped
2018-09-23T03:52:31.973Z,1537674751.973 [profile_station:Science](DEBUG): Aggregate::uninitialize profile_station:Science
2018-09-23T03:52:31.974Z,1537674751.974 [profile_station:Science:G] Stopped
2018-09-23T03:52:31.974Z,1537674751.974 [profile_station:Science:Read_Oil] Stopped
2018-09-23T03:52:31.974Z,1537674751.974 [profile_station:Science:PeakDetectChl] Stopped
2018-09-23T03:52:31.975Z,1537674751.975 [profile_station:Science:PeakDetectChl](DEBUG): Aggregate::uninitialize profile_station:Science:PeakDetectChl
2018-09-23T03:52:31.975Z,1537674751.975 [profile_station:Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2018-09-23T03:52:31.975Z,1537674751.975 [profile_station:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-23T03:52:31.975Z,1537674751.975 [profile_station:NeedComms] Stopped
2018-09-23T03:52:31.975Z,1537674751.975 [profile_station:NeedComms](DEBUG): Aggregate::uninitialize profile_station:NeedComms
2018-09-23T03:52:31.976Z,1537674751.976 [profile_station:NeedComms:B.GoToSurface] Stopped
2018-09-23T03:52:31.976Z,1537674751.976 [profile_station:NeedComms:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-23T03:52:31.976Z,1537674751.976 [profile_station:NeedComms:C] Stopped
2018-09-23T03:52:31.976Z,1537674751.976 [profile_station:StandardEnvelopes] Stopped
2018-09-23T03:52:31.976Z,1537674751.976 [profile_station:StandardEnvelopes](DEBUG): Aggregate::uninitialize profile_station:StandardEnvelopes
2018-09-23T03:52:31.976Z,1537674751.976 [profile_station:StandardEnvelopes:A.AltitudeEnvelope] Stopped
2018-09-23T03:52:31.976Z,1537674751.976 [profile_station:StandardEnvelopes:A.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-23T03:52:31.976Z,1537674751.976 [profile_station:StandardEnvelopes:B.DepthEnvelope] Stopped
2018-09-23T03:52:31.976Z,1537674751.976 [profile_station:StandardEnvelopes:B.DepthEnvelope](DEBUG): Uninitialize.
2018-09-23T03:52:31.976Z,1537674751.976 [profile_station:StandardEnvelopes:C.OffshoreEnvelope] Stopped
2018-09-23T03:52:31.976Z,1537674751.976 [profile_station:StandardEnvelopes:C.OffshoreEnvelope](DEBUG): Uninitialize OffshoreEnvelopeComponent.
2018-09-23T03:52:31.977Z,1537674751.977 [profile_station:I.Pitch] Stopped
2018-09-23T03:52:31.981Z,1537674751.981 [profile_station:J.Buoyancy] Stopped
2018-09-23T03:52:31.981Z,1537674751.981 [profile_station:J.Buoyancy](DEBUG): Uninitialize Buoyancy Component.
2018-09-23T03:52:31.981Z,1537674751.981 [profile_station:K.SetSpeed] Stopped
2018-09-23T03:52:31.981Z,1537674751.981 [profile_station:K.SetSpeed](DEBUG): Uninitialize.
2018-09-23T03:52:31.981Z,1537674751.981 [profile_station:L.DepthEnvelope] Stopped
2018-09-23T03:52:31.981Z,1537674751.981 [profile_station:L.DepthEnvelope](DEBUG): Uninitialize.
2018-09-23T03:52:31.981Z,1537674751.981 [profile_station:M.AltitudeEnvelope] Stopped
2018-09-23T03:52:31.982Z,1537674751.982 [profile_station:M.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-23T03:52:31.982Z,1537674751.982 [profile_station:N.YoYo] Stopped
2018-09-23T03:52:31.982Z,1537674751.982 [profile_station:N.YoYo](DEBUG): Uninitialize YoYoComponent.
2018-09-23T03:52:31.982Z,1537674751.982 [profile_station:CircleWrapper] Stopped
2018-09-23T03:52:31.982Z,1537674751.982 [profile_station:CircleWrapper](DEBUG): Aggregate::uninitialize profile_station:CircleWrapper
2018-09-23T03:52:31.982Z,1537674751.982 [profile_station:CircleWrapper:A] Stopped
2018-09-23T03:52:31.982Z,1537674751.982 [profile_station:CircleWrapper:B.Circle] Stopped
2018-09-23T03:52:31.982Z,1537674751.982 [profile_station:CircleWrapper:B.Circle](DEBUG): Uninitialize.
2018-09-23T03:52:32.304Z,1537674752.304 [MissionManager](IMPORTANT): Started mission Default
2018-09-23T03:52:32.304Z,1537674752.304 [Default] Running Loop=1
2018-09-23T03:52:32.304Z,1537674752.304 [Default](DEBUG): Aggregate::initialize Default
2018-09-23T03:52:32.304Z,1537674752.304 [Default:B.GoToSurface] Running Loop=1
2018-09-23T03:52:32.304Z,1537674752.304 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T03:52:32.305Z,1537674752.305 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-23T03:52:32.305Z,1537674752.305 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-23T03:52:32.305Z,1537674752.305 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-23T03:52:32.306Z,1537674752.306 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T03:52:32.306Z,1537674752.306 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T03:52:32.307Z,1537674752.307 [Default:A.Wait] Running Loop=1
2018-09-23T03:52:32.307Z,1537674752.307 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-23T03:52:32.373Z,1537674752.373 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-23T03:52:45.481Z,1537674765.481 [Default:A.Wait](INFO): Done Waiting.
2018-09-23T03:52:45.481Z,1537674765.481 [Default:A.Wait] Stopped
2018-09-23T03:52:45.482Z,1537674765.482 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-23T03:52:45.853Z,1537674765.853 [Default:CheckIn] Running Loop=1
2018-09-23T03:52:45.853Z,1537674765.853 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-23T03:52:45.853Z,1537674765.853 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-23T03:52:47.798Z,1537674767.798 [NAL9602](INFO): GPS fix at 20180923T035236: (36.837581, -121.898692)
2018-09-23T03:52:47.882Z,1537674767.882 [UniversalFixResidualReporter](INFO): Fix residual: 23.2 %DT, over the last 2614.0 m. Residual distance 606.1 m at bearing 147.4 degrees. Fix at (36.8376, -121.8987) with 188.7 m made good.
2018-09-23T03:52:47.883Z,1537674767.883 [Default:CheckIn:Read_GPS] Stopped
2018-09-23T03:52:47.883Z,1537674767.883 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-23T03:52:52.460Z,1537674772.460 [DataOverHttps](INFO): Sending 72 bytes from file Logs/20180922T190757/Courier0108.lzma
2018-09-23T03:52:53.238Z,1537674773.238 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0108.lzma.bak
2018-09-23T03:52:53.238Z,1537674773.238 [DataOverHttps](INFO): SBD MOMSN=8564586
2018-09-23T03:52:58.248Z,1537674778.248 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-32768,V
2018-09-23T03:53:02.404Z,1537674782.404 [DataOverHttps](INFO): Sending 2359 bytes from file Logs/20180922T190757/Express0109.lzma
2018-09-23T03:53:03.162Z,1537674783.162 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0109.lzma.bak
2018-09-23T03:53:03.162Z,1537674783.162 [DataOverHttps](INFO): SBD MOMSN=8564589
2018-09-23T03:53:03.681Z,1537674783.681 [Default:CheckIn:Read_Iridium] Stopped
2018-09-23T03:53:03.681Z,1537674783.681 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-23T03:53:03.681Z,1537674783.681 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-23T03:53:22.514Z,1537674802.514 [NAL9602](INFO): Powering down
2018-09-23T03:58:04.063Z,1537675084.063 [Default:CheckIn:C.Wait](INFO): Done Waiting.
2018-09-23T03:58:04.063Z,1537675084.063 [Default:CheckIn:C.Wait] Stopped
2018-09-23T03:58:04.063Z,1537675084.063 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-23T03:58:04.064Z,1537675084.064 [Default:CheckIn:D] Running Loop=1
2018-09-23T03:58:04.447Z,1537675084.447 [Default:CheckIn:D] Stopped
2018-09-23T03:58:04.448Z,1537675084.448 [Default:CheckIn:E] Running Loop=1
2018-09-23T03:58:04.844Z,1537675084.844 [Default:CheckIn:E](IMPORTANT): Default mission has been running for 5.535723 min 
2018-09-23T03:58:04.845Z,1537675084.845 [Default:CheckIn:E] Stopped
2018-09-23T03:58:04.845Z,1537675084.845 [Default:CheckIn](INFO): Completed Default:CheckIn
2018-09-23T03:58:04.845Z,1537675084.845 [Default:CheckIn] Stopped
2018-09-23T03:58:04.845Z,1537675084.845 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-23T03:58:04.846Z,1537675084.846 [Default:CheckIn](INFO): Running loop #2
2018-09-23T03:58:04.846Z,1537675084.846 [Default:CheckIn] Running Loop=2
2018-09-23T03:58:04.846Z,1537675084.846 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-23T03:58:04.846Z,1537675084.846 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-23T03:58:08.289Z,1537675088.289 [NAL9602](INFO): Powering up
2018-09-23T03:58:19.473Z,1537675099.473 [NAL9602](INFO): NAL9602 initialized
2018-09-23T03:58:46.668Z,1537675126.668 [NAL9602](INFO): SBD MO Status=2, MOMSN=1200, MT Status=2, MTMSN=0
2018-09-23T03:58:46.668Z,1537675126.668 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-23T03:58:55.872Z,1537675135.872 [NAL9602](INFO): SBD MO Status=0, MOMSN=1200, MT Status=0, MTMSN=0
2018-09-23T03:58:55.872Z,1537675135.872 [NAL9602](INFO): No messages in MT queue
2018-09-23T04:00:14.343Z,1537675214.343 [NAL9602](INFO): GPS fix at 20180923T040003: (36.837997, -121.898998)
2018-09-23T04:00:14.413Z,1537675214.413 [Default:CheckIn:Read_GPS] Stopped
2018-09-23T04:00:14.414Z,1537675214.414 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-23T04:00:20.393Z,1537675220.393 [DataOverHttps](INFO): Sending 63 bytes from file Logs/20180922T190757/Courier0111.lzma
2018-09-23T04:00:21.171Z,1537675221.171 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0111.lzma.bak
2018-09-23T04:00:21.172Z,1537675221.172 [DataOverHttps](INFO): SBD MOMSN=8564600
2018-09-23T04:00:30.299Z,1537675230.299 [DataOverHttps](INFO): Sending 134 bytes from file Logs/20180922T190757/Express0112.lzma
2018-09-23T04:00:31.070Z,1537675231.070 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0112.lzma.bak
2018-09-23T04:00:31.070Z,1537675231.070 [DataOverHttps](INFO): SBD MOMSN=8564605
2018-09-23T04:00:31.583Z,1537675231.583 [Default:CheckIn:Read_Iridium] Stopped
2018-09-23T04:00:31.583Z,1537675231.583 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-23T04:00:31.583Z,1537675231.583 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-23T04:00:50.422Z,1537675250.422 [NAL9602](INFO): Powering down
2018-09-23T04:01:36.129Z,1537675296.129 [DataOverHttps](IMPORTANT): SBD MTMSN=20180923T040126
2018-09-23T04:01:40.343Z,1537675300.343 [DataOverHttps](INFO): Received command:load Science/trackPatch.xml;set trackPatch.MissionTimeout 30 min;set trackPatch.YoYoMinDepth 2 m;set trackPatch.YoYoMaxDepth 10 m;set trackPatch.PeakChlShallowBnd 3 m;set trackPatch.PeakChlDeepBnd 8 m;run
2018-09-23T04:01:40.374Z,1537675300.374 [CommandLine](IMPORTANT): got command load ./Missions/Science/trackPatch.xml
2018-09-23T04:01:40.375Z,1537675300.375 [MissionManager](INFO): Loading Mission: ./Missions/Science/trackPatch.xml
2018-09-23T04:01:40.585Z,1537675300.585 [MissionManager](INFO): DefineArg trackPatch.MinAltitude = 5.000000 m
2018-09-23T04:01:40.587Z,1537675300.587 [MissionManager](INFO): DefineArg trackPatch.MaxDepth = 65.000000 m
2018-09-23T04:01:40.590Z,1537675300.590 [MissionManager](INFO): DefineArg trackPatch.MinWaterDepth = 10.000000 m
2018-09-23T04:01:40.592Z,1537675300.592 [MissionManager](INFO): DefineArg trackPatch.MinOffshore = 2000.000000 m
2018-09-23T04:01:40.594Z,1537675300.594 [MissionManager](INFO): DefineArg trackPatch.NeedCommsTime = 180.000000 min
2018-09-23T04:01:40.596Z,1537675300.596 [MissionManager](INFO): DefineArg trackPatch.MissionTimeout = 56.000000 h
2018-09-23T04:01:40.599Z,1537675300.599 [MissionManager](INFO): DefineArg trackPatch.MassDefault = 0.000000 cm
2018-09-23T04:01:40.634Z,1537675300.634 [MissionManager](INFO): DefineArg trackPatch.BuoyancyNeutral = 205.000004 cc
2018-09-23T04:01:40.637Z,1537675300.637 [MissionManager](INFO): DefineArg trackPatch.YoYoMinDepth = 3.000000 m
2018-09-23T04:01:40.647Z,1537675300.647 [MissionManager](INFO): DefineArg trackPatch.YoYoMaxDepth = 30.000000 m
2018-09-23T04:01:40.654Z,1537675300.654 [MissionManager](INFO): DefineArg trackPatch.YoYoUpPitch = 20.000000 arcdeg
2018-09-23T04:01:40.656Z,1537675300.656 [MissionManager](INFO): DefineArg trackPatch.YoYoDownPitch = -20.000000 arcdeg
2018-09-23T04:01:40.666Z,1537675300.666 [MissionManager](INFO): DefineArg trackPatch.Speed = 1.000000 m/s
2018-09-23T04:01:40.673Z,1537675300.673 [MissionManager](INFO): DefineArg trackPatch.WpMaxDistance = 1000.000000 m
2018-09-23T04:01:40.675Z,1537675300.675 [MissionManager](INFO): DefineArg trackPatch.WpTimeout = 8000.000000 s
2018-09-23T04:01:40.682Z,1537675300.682 [MissionManager](INFO): DefineArg trackPatch.WaterFrame = 1 bool
2018-09-23T04:01:40.684Z,1537675300.684 [MissionManager](INFO): DefineArg trackPatch.Repeat = 20.000000 count
2018-09-23T04:01:40.690Z,1537675300.690 [MissionManager](INFO): DefineArg trackPatch.Turn = 90.000000 arcdeg
2018-09-23T04:01:40.701Z,1537675300.701 [MissionManager](INFO): DefineArg trackPatch.Reverse = 180.000000 arcdeg
2018-09-23T04:01:40.703Z,1537675300.703 [MissionManager](INFO): DefineArg trackPatch.TwoPi = 360.000000 arcdeg
2018-09-23T04:01:40.710Z,1537675300.710 [MissionManager](INFO): DefineArg trackPatch.LowPassWindowLen = 20.000000 count
2018-09-23T04:01:40.712Z,1537675300.712 [MissionManager](INFO): DefineArg trackPatch.PeakChlShallowBnd = 10.000000 m
2018-09-23T04:01:40.723Z,1537675300.723 [MissionManager](INFO): DefineArg trackPatch.PeakChlDeepBnd = 20.000000 m
2018-09-23T04:01:40.729Z,1537675300.729 [MissionManager](INFO): DefineArg trackPatch.FilterWidth = 4.000000 count
2018-09-23T04:01:40.731Z,1537675300.731 [MissionManager](INFO): DefineArg trackPatch.BeginThreshold = nan ug/l
2018-09-23T04:01:40.738Z,1537675300.738 [MissionManager](INFO): DefineArg trackPatch.OffPeakFraction = 80.000000 %
2018-09-23T04:01:40.740Z,1537675300.740 [MissionManager](INFO): DefineArg trackPatch.PatchMode = 0 bool
2018-09-23T04:01:40.742Z,1537675300.742 [MissionManager](INFO): DefineArg trackPatch.WpBearing = -90.000000 arcdeg
2018-09-23T04:01:40.772Z,1537675300.772 [MissionManager](INFO): DefineOutput trackPatch.PatchDetectOn = 0 bool
2018-09-23T04:01:40.774Z,1537675300.774 [MissionManager](INFO): DefineOutput trackPatch.WpDone = 0 bool
2018-09-23T04:01:40.777Z,1537675300.777 [MissionManager](INFO): DefineOutput trackPatch.PatchChl = nan ug/l
2018-09-23T04:01:40.779Z,1537675300.779 [MissionManager](INFO): DefineOutput trackPatch.PatchChlDepth = nan m
2018-09-23T04:01:40.797Z,1537675300.797 [MissionManager](INFO): DefineOutput trackPatch.PatchChlLatitude = nan arcdeg
2018-09-23T04:01:40.799Z,1537675300.799 [MissionManager](INFO): DefineOutput trackPatch.PatchChlLongitude = nan arcdeg
2018-09-23T04:01:40.802Z,1537675300.802 [MissionManager](INFO): DefineOutput trackPatch.PatchChlDistance = 0.000000 m
2018-09-23T04:01:40.803Z,1537675300.803 [trackPatch:A.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-23T04:01:40.823Z,1537675300.823 [trackPatch:B.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-23T04:01:40.829Z,1537675300.829 [MissionManager](INFO): Inserting Stack: Missions/Insert/Surface.xml
2018-09-23T04:01:40.901Z,1537675300.901 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.SurfaceDepthRate = nan m/s
2018-09-23T04:01:40.903Z,1537675300.903 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.SurfacePitch = 20.000000 arcdeg
2018-09-23T04:01:40.906Z,1537675300.906 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.SurfaceSpeed = 1.000000 m/s
2018-09-23T04:01:40.922Z,1537675300.922 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.IridiumTimeout = 30.000000 min
2018-09-23T04:01:40.926Z,1537675300.926 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.UnpackSplitAtSurface = 0 bool
2018-09-23T04:01:40.928Z,1537675300.928 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-23T04:01:40.978Z,1537675300.978 [MissionManager](INFO): RedefineArg trackPatch:SurfaceCommsSplit.SurfacePitch = value:20.000000 arcdeg
2018-09-23T04:01:40.980Z,1537675300.980 [MissionManager](INFO): RedefineArg trackPatch:SurfaceCommsSplit.SurfaceSpeed = value:1.000000 m/s
2018-09-23T04:01:40.981Z,1537675300.981 [MissionManager](INFO): RedefineArg trackPatch:SurfaceCommsSplit.UnpackSplitAtSurface = value:1 bool
2018-09-23T04:01:40.982Z,1537675300.982 [MissionManager](INFO): Inserting Stack: Missions/Insert/Surface.xml
2018-09-23T04:01:41.077Z,1537675301.077 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.SurfaceDepthRate = nan m/s
2018-09-23T04:01:41.079Z,1537675301.079 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.SurfacePitch = 20.000000 arcdeg
2018-09-23T04:01:41.081Z,1537675301.081 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.SurfaceSpeed = 1.000000 m/s
2018-09-23T04:01:41.084Z,1537675301.084 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.IridiumTimeout = 30.000000 min
2018-09-23T04:01:41.086Z,1537675301.086 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.UnpackSplitAtSurface = 0 bool
2018-09-23T04:01:41.087Z,1537675301.087 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-23T04:01:41.140Z,1537675301.140 [MissionManager](INFO): RedefineArg trackPatch:SurfaceComms:SurfaceComms.SurfacePitch = value:20.000000 arcdeg
2018-09-23T04:01:41.142Z,1537675301.142 [MissionManager](INFO): RedefineArg trackPatch:SurfaceComms:SurfaceComms.SurfaceSpeed = value:1.000000 m/s
2018-09-23T04:01:41.152Z,1537675301.152 [trackPatch:F.OffshoreEnvelope](DEBUG): Construct OffshoreEnvelope.
2018-09-23T04:01:41.157Z,1537675301.157 [trackPatch:G.WaterDepthEnvelope](DEBUG): Construct WaterDepthEnvelope.
2018-09-23T04:01:41.173Z,1537675301.173 [trackPatch:H.Pitch](DEBUG): Construct.
2018-09-23T04:01:41.177Z,1537675301.177 [trackPatch:I.Buoyancy](DEBUG): Construct Buoyancy.
2018-09-23T04:01:41.179Z,1537675301.179 [MissionManager](INFO): Inserting Stack: Missions/Insert/Science.xml
2018-09-23T04:01:41.318Z,1537675301.318 [MissionManager](INFO): DefineArg trackPatch:Science.SampleISUS = 0 bool
2018-09-23T04:01:41.321Z,1537675301.321 [MissionManager](INFO): DefineArg trackPatch:Science.SampleISUSmaxPitch = 60.000000 arcdeg
2018-09-23T04:01:41.323Z,1537675301.323 [MissionManager](INFO): DefineArg trackPatch:Science.SampleISUSminPitch = -60.000000 arcdeg
2018-09-23T04:01:41.326Z,1537675301.326 [MissionManager](INFO): DefineArg trackPatch:Science.PeakDetectChlActive = 0 bool
2018-09-23T04:01:41.328Z,1537675301.328 [MissionManager](INFO): DefineArg trackPatch:Science.HighestChlPeakReportActive = 0 bool
2018-09-23T04:01:41.330Z,1537675301.330 [MissionManager](INFO): DefineArg trackPatch:Science.PatchTracking = 1 bool
2018-09-23T04:01:41.332Z,1537675301.332 [MissionManager](INFO): DefineArg trackPatch:Science.FilterWidthHorizontal = 3.000000 count
2018-09-23T04:01:41.334Z,1537675301.334 [MissionManager](INFO): DefineArg trackPatch:Science.NumProfilesSlidingwindow = 100.000000 count
2018-09-23T04:01:41.336Z,1537675301.336 [MissionManager](INFO): DefineArg trackPatch:Science.OffPeakFractionHorizontal = 80.000000 %
2018-09-23T04:01:41.338Z,1537675301.338 [MissionManager](INFO): DefineArg trackPatch:Science.PeakDetectNO3Active = 0 bool
2018-09-23T04:01:41.340Z,1537675301.340 [MissionManager](INFO): DefineArg trackPatch:Science.PeakDetectOilActive = 0 bool
2018-09-23T04:01:41.343Z,1537675301.343 [MissionManager](INFO): DefineArg trackPatch:Science.UpwardDerivativeOfTemperatureActive = 0 bool
2018-09-23T04:01:41.345Z,1537675301.345 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledAanderaaO2 = 0.000000 bool
2018-09-23T04:01:41.348Z,1537675301.348 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledNeilBrown = 0.000000 bool
2018-09-23T04:01:41.350Z,1537675301.350 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledSeabird = 0.000000 bool
2018-09-23T04:01:41.353Z,1537675301.353 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledTurbulence_NPS = 0.000000 bool
2018-09-23T04:01:41.355Z,1537675301.355 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledWetLabsBB2FL = 0.000000 bool
2018-09-23T04:01:41.358Z,1537675301.358 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledWetLabsSeaOWL_UV_A = 1.000000 bool
2018-09-23T04:01:41.360Z,1537675301.360 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledISUS = 0.000000 bool
2018-09-23T04:01:41.396Z,1537675301.396 [MissionManager](INFO): DefineArg trackPatch:Science.LowPassWindowLength = 20.000000 count
2018-09-23T04:01:41.398Z,1537675301.398 [MissionManager](INFO): DefineArg trackPatch:Science.PeakChlShallowBound = 10.000000 m
2018-09-23T04:01:41.400Z,1537675301.400 [MissionManager](INFO): DefineArg trackPatch:Science.PeakChlDeepBound = 20.000000 m
2018-09-23T04:01:41.403Z,1537675301.403 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChl = 0.000000 ug/l
2018-09-23T04:01:41.427Z,1537675301.427 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlDepth = 0.000000 m
2018-09-23T04:01:41.430Z,1537675301.430 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlTemperature = 0.000000 degC
2018-09-23T04:01:41.432Z,1537675301.432 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlLatitude = nan arcdeg
2018-09-23T04:01:41.434Z,1537675301.434 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlLongitude = nan arcdeg
2018-09-23T04:01:41.436Z,1537675301.436 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3 = 0.000000 umol/l
2018-09-23T04:01:41.455Z,1537675301.455 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3Depth = 0.000000 m
2018-09-23T04:01:41.457Z,1537675301.457 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3Latitude = nan arcdeg
2018-09-23T04:01:41.460Z,1537675301.460 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3Longitude = nan arcdeg
2018-09-23T04:01:41.462Z,1537675301.462 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChl = 0.000000 m
2018-09-23T04:01:41.464Z,1537675301.464 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlDepth = 0.000000 m
2018-09-23T04:01:41.482Z,1537675301.482 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlLatitude = nan arcdeg
2018-09-23T04:01:41.484Z,1537675301.484 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlLongitude = nan arcdeg
2018-09-23T04:01:41.487Z,1537675301.487 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlDistance = nan m
2018-09-23T04:01:41.504Z,1537675301.504 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOil = 0.000000 kg/m3
2018-09-23T04:01:41.506Z,1537675301.506 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOilDepth = 0.000000 m
2018-09-23T04:01:41.508Z,1537675301.508 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOilLatitude = nan arcdeg
2018-09-23T04:01:41.511Z,1537675301.511 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOilLongitude = nan arcdeg
2018-09-23T04:01:41.560Z,1537675301.560 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-23T04:01:41.587Z,1537675301.587 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-23T04:01:41.613Z,1537675301.613 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-23T04:01:41.636Z,1537675301.636 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-23T04:01:41.660Z,1537675301.660 [MissionManager](INFO): RedefineArg trackPatch:Science.PeakDetectChlActive = value:1 bool
2018-09-23T04:01:41.662Z,1537675301.662 [MissionManager](INFO): RedefineArg trackPatch:Science.PatchTracking = value:1 bool
2018-09-23T04:01:41.663Z,1537675301.663 [MissionManager](INFO): RedefineArg trackPatch:Science.LowPassWindowLength = reader:trackPatch.LowPassWindowLen
2018-09-23T04:01:41.665Z,1537675301.665 [MissionManager](INFO): RedefineArg trackPatch:Science.PeakChlShallowBound = reader:trackPatch.PeakChlShallowBnd
2018-09-23T04:01:41.682Z,1537675301.682 [MissionManager](INFO): RedefineArg trackPatch:Science.PeakChlDeepBound = reader:trackPatch.PeakChlDeepBnd
2018-09-23T04:01:41.683Z,1537675301.683 [MissionManager](INFO): RedefineArg trackPatch:Science.OffPeakFractionHorizontal = reader:trackPatch.OffPeakFraction
2018-09-23T04:01:41.684Z,1537675301.684 [trackPatch:K.SetSpeed](DEBUG): Construct.
2018-09-23T04:01:41.686Z,1537675301.686 [trackPatch:L.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-23T04:01:41.709Z,1537675301.709 [trackPatch:M.YoYo](DEBUG): Construct YoYo.
2018-09-23T04:01:41.725Z,1537675301.725 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-23T04:01:41.772Z,1537675301.772 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-23T04:01:41.783Z,1537675301.783 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-23T04:01:41.804Z,1537675301.804 [trackPatch:PatchDetectHorizontal:InLegWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-23T04:01:41.821Z,1537675301.821 [trackPatch:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-23T04:01:41.871Z,1537675301.871 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Trigger="Tethys/Trigger" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Trigger http://okeanids.mbari.org/tethys/Xml/Trigger.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="trackPatch">

    <Description>
        Vehicle runs yo-yos, with patch detect enabled for cholorphyll
        concentration.
    </Description>

<!-- Vehicle safety parameters -->

    <DefineArg Name="MinAltitude"><Description>
        Minimum altitude for the entire mission.
    </Description><Units:meter/><Value>5</Value></DefineArg>

    <DefineArg Name="MaxDepth"><Description>
        Maximum depth for the entire mission.
    </Description><Units:meter/><Value>65</Value></DefineArg>

    <DefineArg Name="MinWaterDepth"><Description>
        Minimum water depth for the entire mission.
    </Description><Units:meter/><Value>10</Value></DefineArg>

    <DefineArg Name="MinOffshore"><Description>
        Minimum offshore distance for the entire mission.
    </Description><Units:meter/><Value>2000</Value></DefineArg>

    <DefineArg Name="NeedCommsTime"><Description>
        Maximum time between surfacings for communications
    </Description><Units:minute/><Value>180</Value></DefineArg>

    <DefineArg Name="MissionTimeout"><Description>
        Timeout for the entire mission
    </Description><Units:hour/><Value>56</Value></DefineArg>

    <DefineArg Name="MassDefault"><Description>
        Static setting for mass during the mission. Defaults to massDefault
        setting in the Config/Control.cfg file.
    </Description><Control:VerticalControl.massDefault/></DefineArg>

    <DefineArg Name="BuoyancyNeutral"><Description>
        Buoyancy bladder position while performing the YoYo behavior. Defaults
        to buoyancyNeutral setting in the Config/Control.cfg file.
    </Description><Control:VerticalControl.buoyancyNeutral/></DefineArg>

<!-- Basic guidance settings -->

    <DefineArg Name="YoYoMinDepth"><Description>
        Minimum depth during yo-yo's.
    </Description><Units:meter/><Value>3.0</Value></DefineArg>

    <DefineArg Name="YoYoMaxDepth"><Description>
        Maximum depth during yo-yo's.
    </Description><Units:meter/><Value>30.0</Value></DefineArg>

    <DefineArg Name="YoYoUpPitch"><Description>
        Pitch when yo-yo's are ascending.
    </Description><Units:degree/><Value>20.0</Value></DefineArg>

    <DefineArg Name="YoYoDownPitch"><Description>
        Pitch when yo-yo's are descending.
    </Description><Units:degree/><Value>-20.0</Value></DefineArg>

    <DefineArg Name="Speed"><Description>
        Vehicle speed.
    </Description><Units:meter_per_second/><Value>1</Value></DefineArg>

    <DefineArg Name="WpMaxDistance"><Description>
        Maximum length of each tracking leg
<!--debug
    </Description><Units:meter/><Value>7500</Value></DefineArg>
-->
    </Description><Units:meter/><Value>1000</Value></DefineArg>

    <DefineArg Name="WpTimeout"><Description>
        Maximum duration of each tracking leg
    </Description><Units:second/><Value>8000</Value></DefineArg>

    <DefineArg Name="WaterFrame"><Description>
        Set WaterFrame true to drive towards waypoints in the water frame of
        reference
    </Description><True/></DefineArg>

    <DefineArg Name="Repeat"><Description>
        Maximum number of tracking legs
    </Description><Units:count/><Value>20</Value></DefineArg>

<!-- Constant settings for each tracking leg -->

    <DefineArg Name="Turn"><Description>
        Amount to turn at each leg
    </Description><Units:degree/><Value>90</Value></DefineArg>

    <DefineArg Name="Reverse"><Description>
        Change in bearing which reverses vehicle direction
    </Description><Units:degree/><Value>180</Value></DefineArg>

    <DefineArg Name="TwoPi"><Description>
        Applied to stop run-up of angles
    </Description><Units:degree/><Value>360</Value></DefineArg>

    <DefineArg Name="LowPassWindowLen"><Description>
        Low-pass window length (based on depth sensor sampling interval 0.4
        second) for low-pass filtering.
    </Description><Units:count/><Value>20</Value></DefineArg>

    <DefineArg Name="PeakChlShallowBnd"><Description>
        Shallow depth bound for detecting chl peak on each descent or ascent
        profile.
<!--debug
    </Description><Units:meter/><Value>NaN</Value></DefineArg>
-->
    </Description><Units:meter/><Value>10</Value></DefineArg>

    <DefineArg Name="PeakChlDeepBnd"><Description>
        Deep depth bound for detecting chl peak on each descent or ascent
        profile.
<!--debug
    </Description><Units:meter/><Value>NaN</Value></DefineArg>
-->
    </Description><Units:meter/><Value>20</Value></DefineArg>

    <DefineArg Name="FilterWidth"><Description>
        Width of boxcar filter used in horizontal patch detection
    </Description><Units:count/><Value>4</Value></DefineArg>

    <DefineArg Name="BeginThreshold"><Description>
        If non-NaN, sets threshold for starting horizontal patch detection
    </Description><Units:microgram_per_liter/><Value>NaN</Value></DefineArg>

    <DefineArg Name="OffPeakFraction"><Description>
        When filtered horizontal value is this fraction of the peak, consider it
        outside the patch.
    </Description><Units:percent/><Value>80</Value></DefineArg>

    <DefineArg Name="PatchMode"><Description>
        If true, use center of "in peak" range as the turn-around point. If
        false use maximum horizontal peak location as the turn-around point.
    </Description><False/></DefineArg>

<!-- Variable Settings for each tracking leg -->

    <DefineArg Name="WpBearing"><Description>
        Bearing being followed in the current leg. Set this to initialize start
        direction of patch tracking.
    </Description><Units:degree/><Value>-90</Value></DefineArg>

    <DefineOutput Name="PatchDetectOn"><Description>
        Mission sets this to true when the patch has been crossed.
    </Description><False/></DefineOutput>

    <DefineOutput Name="WpDone"><Description>
        Mission sets this to true when the cross-patch waypoint has been
        reached.
    </Description><False/></DefineOutput>

    <DefineOutput Name="PatchChl"><Units:microgram_per_liter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlDepth"><Units:meter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlDistance"><Units:meter/><Value>0</Value></DefineOutput>

<!-- The timeout -->

    <Timeout Duration="MissionTimeout"/>

<!-- And now the mission -->

    <Guidance:AltitudeEnvelope>
        <Parallel/>
        <Setting><Guidance:AltitudeEnvelope.minAltitude/><Arg Name="MinAltitude"/></Setting>
    </Guidance:AltitudeEnvelope>

    <Guidance:DepthEnvelope>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="MaxDepth"/></Setting>
    </Guidance:DepthEnvelope>

    <Insert Filename="Insert/Surface.xml" Id="SurfaceCommsSplit">
        <RedefineArg Name="SurfacePitch"><Units:degree/><Value>20</Value></RedefineArg>
        <RedefineArg Name="SurfaceSpeed"><Units:meter_per_second/><Value>1</Value></RedefineArg>
        <RedefineArg Name="UnpackSplitAtSurface"><True/></RedefineArg>
    </Insert>

    <Aggregate Id="SurfaceComms">

        <When>
            <Called/>
        </When>

        <Insert Filename="Insert/Surface.xml">
            <RedefineArg Name="SurfacePitch"><Units:degree/><Value>20</Value></RedefineArg>
            <RedefineArg Name="SurfaceSpeed"><Units:meter_per_second/><Value>1</Value></RedefineArg>
        </Insert>

    </Aggregate>

<!-- GPS Update.  Don't go too long w/o a GPS fix. -->

    <Aggregate Id="NeedComms">

        <When>
            <Universal:platform_pitch_angle/>
            <Gt><Units:degree/><Value>0</Value></Gt>
            <And><Elapsed><Universal:time_fix/></Elapsed><Gt><Arg Name="NeedCommsTime"/></Gt></And>
            <Or><Elapsed><Universal:time_fix/></Elapsed><Gt><Arg Name="NeedCommsTime"/><Add><Units:minute/><Value>10</Value></Add></Gt></Or>
        </When>

        <Syslog Severity="Important">NeedComms Timeout Surfacing</Syslog>

        <Call RefId="SurfaceComms"/>

    </Aggregate>

    <Guidance:OffshoreEnvelope>
        <Parallel/>
        <Setting><Guidance:OffshoreEnvelope.minOffshore/><Arg Name="MinOffshore"/></Setting>
    </Guidance:OffshoreEnvelope>

    <Guidance:WaterDepthEnvelope>
        <Parallel/>
        <Setting><Guidance:WaterDepthEnvelope.minWaterDepth/><Arg Name="MinWaterDepth"/></Setting>
    </Guidance:WaterDepthEnvelope>

    <Guidance:Pitch>
        <Parallel/>
        <Setting><Guidance:Pitch.massPosition/><Arg Name="MassDefault"/></Setting>
    </Guidance:Pitch>

    <Guidance:Buoyancy>
        <Parallel/>
        <Setting><Guidance:Buoyancy.position /><Arg Name="BuoyancyNeutral"/></Setting>
    </Guidance:Buoyancy>

<!-- If we're executing here or below, lets' get science data! -->

    <Insert Filename="Insert/Science.xml">
        <RedefineArg Name="PeakDetectChlActive"><True/></RedefineArg>
        <RedefineArg Name="PatchTracking"><True/></RedefineArg>
        <RedefineArg Name="LowPassWindowLength"><Arg Name="LowPassWindowLen"/></RedefineArg>
        <RedefineArg Name="PeakChlShallowBound"><Arg Name="PeakChlShallowBnd"/></RedefineArg>
        <RedefineArg Name="PeakChlDeepBound"><Arg Name="PeakChlDeepBnd"/></RedefineArg>
        <RedefineArg Name="OffPeakFractionHorizontal"><Arg Name="OffPeakFraction"/></RedefineArg>
    </Insert>

    <Guidance:SetSpeed>
        <Parallel/>
        <Setting><Guidance:SetSpeed.speed/><Arg Name="Speed"/></Setting>
    </Guidance:SetSpeed>

    <Guidance:DepthEnvelope>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.minDepth/><Arg Name="YoYoMinDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="YoYoMaxDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:DepthEnvelope.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:DepthEnvelope>

    <Guidance:YoYo>
        <Parallel/>
        <Setting><Guidance:YoYo.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:YoYo.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:YoYo>

    <Aggregate Id="PatchDetectHorizontal">

        <Sequence Repeat="Repeat"/>

        <Aggregate Id="PatchDetection">

            <When>
                <Arg Name="PatchDetectOn"/>
            </When>

            <Trigger:PeakDetectHorizontal Id="PeakDetectHorizontalTrigger">
                <Sequence/>
                <Break><Arg Name="WpDone"/>
                </Break>
                <Setting><Trigger:PeakDetectHorizontal.patchTracking/><Units:bool/><Value>1</Value></Setting>
                <Setting><Trigger:PeakDetectHorizontal.detectFrom/><Arg Name="Science:PeakChl"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.depthFrom/><Arg Name="Science:PeakChlDepth"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.latitudeFrom/><Arg Name="Science:PeakChlLatitude"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.longitudeFrom/><Arg Name="Science:PeakChlLongitude"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.beginThreshold/><Arg Name="BeginThreshold"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.offPeakFraction/><Arg Name="OffPeakFraction"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.filterWidth/><Arg Name="FilterWidth"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.centerPeak/><Arg Name="PatchMode"/></Setting>
                <OutputArg Name="PatchChl"><Trigger:PeakDetectHorizontal.peakDetect/></OutputArg>
                <OutputArg Name="PatchChlDepth"><Trigger:PeakDetectHorizontal.peakDepth/></OutputArg>
                <OutputArg Name="PatchChlLatitude"><Trigger:PeakDetectHorizontal.peakLatitude/></OutputArg>
                <OutputArg Name="PatchChlLongitude"><Trigger:PeakDetectHorizontal.peakLongitude/></OutputArg>
                <OutputArg Name="PatchChlDistance"><Trigger:PeakDetectHorizontal.peakDistance/></OutputArg>
            </Trigger:PeakDetectHorizontal>

            <Syslog Severity="Important">Fell below OffPeakFraction. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Universal:depth/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog>

            <SendData Service="Express"><Arg Name="PatchChl"/><Arg Name="PatchChlDepth"/><Arg Name="PatchChlLatitude"/><Arg Name="PatchChlLongitude"/>
            </SendData>

            <Assign Id="AssignPatchDetectOff"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

        </Aggregate>

        <Assign Id="AssignPatchDetectOn"><Sequence/><Arg Name="PatchDetectOn"/><True/></Assign>

        <Syslog Severity="Important">Next: bearing for CrossLeg: <Arg Name="WpBearing"/><Units:degree/>. WpMaxDistance = <Arg Name="WpMaxDistance"/><Units:meter/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>.</Syslog>

        <Aggregate Id="CrossLeg">

            <Description>
                This is a long leg across the width of the patch. Also the first
                leg in a mission run. Two waypoints run in parallel: a short run
                to the surfacing point, and a longer run to the edge of the
                patch.
            </Description>

            <Sequence/>

            <Break><Arg Name="WpDone"/>
                <Or><Arg Name="PatchDetectOn"/><Eq><False/></Eq></Or>
            </Break>

            <Guidance:Waypoint Id="CrossSurfaceWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="PatchChlDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Call RefId="SurfaceComms"/>

            <Guidance:Waypoint Id="CrossPeakWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="WpMaxDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

<!--debug-->
            <Syslog Severity="Important">CrossPeakWp done. Lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Universal:depth/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog> 

            <Assign Id="AssignPatchDetectOffInCrossLeg"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

            <Assign Id="AssignWpDoneInCrossLeg"><Sequence/><Arg Name="WpDone"/><True/></Assign>

        </Aggregate>

        <Assign Id="AssignWpBearingForInLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Add><Arg Name="Reverse"/></Add><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

        <Syslog Severity="Important">Next: bearing for InLeg: <Arg Name="WpBearing"/><Units:degree/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Universal:depth/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog> 

        <Guidance:Waypoint Id="InLegWp">
            <Description>
                Simply drive back towards the patch center
            </Description>
            <Sequence/>
            <Timeout Duration="WpTimeout"/>
            <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="PatchChlDistance"/></Setting>
            <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
            <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
        </Guidance:Waypoint>

        <Assign Id="AssignWpBearingForOutLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Sub><Arg Name="Turn"/></Sub><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

        <Syslog Severity="Important">Next: bearing for OutLeg: <Arg Name="WpBearing"/><Units:degree/>. WpMaxDistance = <Arg Name="WpMaxDistance"/><Units:meter/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Universal:depth/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog>

        <Call RefId="SurfaceCommsSplit"/>

        <Assign Id="AssignPatchDetectOnForOutLeg"><Sequence/><Arg Name="PatchDetectOn"/><True/></Assign>

        <Aggregate Id="OutLeg">

            <Description>
                Drive outward until edge of patch is detected.
            </Description>

            <Sequence/>

            <Break><Arg Name="WpDone"/>
                <Or><Arg Name="PatchDetectOn"/><Eq><False/></Eq></Or>
            </Break>

            <Guidance:Waypoint Id="OutLegWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="WpMaxDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Assign Id="AssignPatchDetectOffInOutLeg"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

            <Assign Id="AssignWpDoneInOutLeg"><Sequence/><Arg Name="WpDone"/><True/></Assign>

        </Aggregate>

        <Assign Id="AssignWpBearingForCrossLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Add><Arg Name="Reverse"/></Add><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

    </Aggregate>

</Mission>


2018-09-23T04:01:41.872Z,1537675301.872 [CommandLine](IMPORTANT): Loaded ./Missions/Science/trackPatch.xml
2018-09-23T04:01:53.348Z,1537675313.348 [CommandLine](IMPORTANT): got command set trackPatch.MissionTimeout 30.000000 minute
2018-09-23T04:01:53.349Z,1537675313.349 [CommandLine](IMPORTANT): got command set trackPatch.YoYoMinDepth 2.000000 meter
2018-09-23T04:01:53.350Z,1537675313.350 [CommandLine](IMPORTANT): got command set trackPatch.YoYoMaxDepth 10.000000 meter
2018-09-23T04:01:53.350Z,1537675313.350 [CommandLine](IMPORTANT): got command set trackPatch.PeakChlShallowBnd 3.000000 meter
2018-09-23T04:01:53.351Z,1537675313.351 [CommandLine](IMPORTANT): got command set trackPatch.PeakChlDeepBnd 8.000000 meter
2018-09-23T04:01:53.352Z,1537675313.352 [CommandLine](IMPORTANT): got command run
2018-09-23T04:01:53.355Z,1537675313.355 [CommandLine](IMPORTANT): Running 
2018-09-23T04:01:53.382Z,1537675313.382 [RDI_Pathfinder](ERROR): No DVL communication! Re-initializing
2018-09-23T04:01:53.382Z,1537675313.382 [RDI_Pathfinder] Communications Fault, FailCount= 1
2018-09-23T04:01:53.382Z,1537675313.382 [RDI_Pathfinder](ERROR): Communications Fault
2018-09-23T04:01:53.440Z,1537675313.440 [Default] Stopped
2018-09-23T04:01:53.440Z,1537675313.440 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-23T04:01:53.440Z,1537675313.440 [Default:B.GoToSurface] Stopped
2018-09-23T04:01:53.441Z,1537675313.441 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-23T04:01:53.443Z,1537675313.443 [Default:CheckIn] Stopped
2018-09-23T04:01:53.443Z,1537675313.443 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-23T04:01:53.443Z,1537675313.443 [Default:CheckIn:C.Wait] Stopped
2018-09-23T04:01:53.443Z,1537675313.443 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-23T04:01:53.444Z,1537675313.444 [MissionManager](IMPORTANT): Started mission trackPatch
2018-09-23T04:01:53.444Z,1537675313.444 [trackPatch] Running Loop=1
2018-09-23T04:01:53.444Z,1537675313.444 [trackPatch](DEBUG): Aggregate::initialize trackPatch
2018-09-23T04:01:53.444Z,1537675313.444 [trackPatch:A.AltitudeEnvelope] Running Loop=1
2018-09-23T04:01:53.444Z,1537675313.444 [trackPatch:A.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-23T04:01:53.444Z,1537675313.444 [trackPatch:B.DepthEnvelope] Running Loop=1
2018-09-23T04:01:53.444Z,1537675313.444 [trackPatch:B.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-23T04:01:53.453Z,1537675313.453 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-23T04:01:53.453Z,1537675313.453 [trackPatch:F.OffshoreEnvelope](DEBUG): Initialize OffshoreEnvelopeComponent.
2018-09-23T04:01:53.453Z,1537675313.453 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-23T04:01:53.453Z,1537675313.453 [trackPatch:G.WaterDepthEnvelope](DEBUG): Initialize WaterDepthEnvelopeComponent.
2018-09-23T04:01:53.453Z,1537675313.453 [trackPatch:H.Pitch] Running Loop=1
2018-09-23T04:01:53.453Z,1537675313.453 [trackPatch:H.Pitch](DEBUG): Initialize.
2018-09-23T04:01:53.454Z,1537675313.454 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-23T04:01:53.454Z,1537675313.454 [trackPatch:I.Buoyancy](DEBUG): Initialize Buoyancy Component.
2018-09-23T04:01:53.454Z,1537675313.454 [trackPatch:Science] Running Loop=1
2018-09-23T04:01:53.454Z,1537675313.454 [trackPatch:Science](DEBUG): Aggregate::initialize trackPatch:Science
2018-09-23T04:01:53.454Z,1537675313.454 [trackPatch:Science:A] Running Loop=1
2018-09-23T04:01:53.454Z,1537675313.454 [trackPatch:Science:B] Running Loop=1
2018-09-23T04:01:53.454Z,1537675313.454 [trackPatch:Science:C] Running Loop=1
2018-09-23T04:01:53.454Z,1537675313.454 [trackPatch:Science:D] Running Loop=1
2018-09-23T04:01:53.454Z,1537675313.454 [trackPatch:Science:E] Running Loop=1
2018-09-23T04:01:53.454Z,1537675313.454 [trackPatch:Science:F] Running Loop=1
2018-09-23T04:01:53.455Z,1537675313.455 [trackPatch:Science:G] Running Loop=1
2018-09-23T04:01:53.455Z,1537675313.455 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-23T04:01:53.455Z,1537675313.455 [trackPatch:Science:PeakDetectChl] Running Loop=1
2018-09-23T04:01:53.455Z,1537675313.455 [trackPatch:Science:PeakDetectChl](DEBUG): Aggregate::initialize trackPatch:Science:PeakDetectChl
2018-09-23T04:01:53.455Z,1537675313.455 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2018-09-23T04:01:53.455Z,1537675313.455 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-23T04:01:53.456Z,1537675313.456 [trackPatch:Science:HighestChlPeakReport] Running Loop=1
2018-09-23T04:01:53.456Z,1537675313.456 [trackPatch:Science:HighestChlPeakReport](DEBUG): Aggregate::initialize trackPatch:Science:HighestChlPeakReport
2018-09-23T04:01:53.457Z,1537675313.457 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2018-09-23T04:01:53.465Z,1537675313.465 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2018-09-23T04:01:53.465Z,1537675313.465 [trackPatch:Science:PeakDetectNO3] Running Loop=1
2018-09-23T04:01:53.466Z,1537675313.466 [trackPatch:Science:PeakDetectNO3](DEBUG): Aggregate::initialize trackPatch:Science:PeakDetectNO3
2018-09-23T04:01:53.466Z,1537675313.466 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2018-09-23T04:01:53.466Z,1537675313.466 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-23T04:01:53.467Z,1537675313.467 [trackPatch:Science:PeakDetectOil] Running Loop=1
2018-09-23T04:01:53.467Z,1537675313.467 [trackPatch:Science:PeakDetectOil](DEBUG): Aggregate::initialize trackPatch:Science:PeakDetectOil
2018-09-23T04:01:53.467Z,1537675313.467 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2018-09-23T04:01:53.467Z,1537675313.467 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-23T04:01:53.468Z,1537675313.468 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-23T04:01:53.468Z,1537675313.468 [trackPatch:K.SetSpeed](DEBUG): Initialize.
2018-09-23T04:01:53.468Z,1537675313.468 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-23T04:01:53.468Z,1537675313.468 [trackPatch:L.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-23T04:01:53.469Z,1537675313.469 [trackPatch:M.YoYo] Running Loop=1
2018-09-23T04:01:53.469Z,1537675313.469 [trackPatch:M.YoYo](DEBUG): Initialize YoYoComponent.
2018-09-23T04:01:53.469Z,1537675313.469 [trackPatch:SurfaceCommsSplit] Running Loop=1
2018-09-23T04:01:53.470Z,1537675313.470 [trackPatch:SurfaceCommsSplit](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit
2018-09-23T04:01:53.470Z,1537675313.470 [trackPatch:SurfaceCommsSplit:A.GoToSurface] Running Loop=1
2018-09-23T04:01:53.470Z,1537675313.470 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T04:01:53.470Z,1537675313.470 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-23T04:01:53.471Z,1537675313.471 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-23T04:01:53.471Z,1537675313.471 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-23T04:01:53.471Z,1537675313.471 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T04:01:53.472Z,1537675313.472 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T04:01:53.477Z,1537675313.477 [trackPatch:M.YoYo] Running Loop=1
2018-09-23T04:01:53.478Z,1537675313.478 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-23T04:01:53.480Z,1537675313.480 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-23T04:01:53.482Z,1537675313.482 [trackPatch:Science] Running Loop=1
2018-09-23T04:01:53.501Z,1537675313.501 [trackPatch:Science:PeakDetectOil] Stopped
2018-09-23T04:01:53.501Z,1537675313.501 [trackPatch:Science:PeakDetectOil](DEBUG): Aggregate::uninitialize trackPatch:Science:PeakDetectOil
2018-09-23T04:01:53.501Z,1537675313.501 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2018-09-23T04:01:53.501Z,1537675313.501 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-23T04:01:53.501Z,1537675313.501 [trackPatch:Science:PeakDetectNO3] Stopped
2018-09-23T04:01:53.502Z,1537675313.502 [trackPatch:Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize trackPatch:Science:PeakDetectNO3
2018-09-23T04:01:53.502Z,1537675313.502 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2018-09-23T04:01:53.502Z,1537675313.502 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-23T04:01:53.502Z,1537675313.502 [trackPatch:Science:HighestChlPeakReport] Stopped
2018-09-23T04:01:53.502Z,1537675313.502 [trackPatch:Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize trackPatch:Science:HighestChlPeakReport
2018-09-23T04:01:53.502Z,1537675313.502 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2018-09-23T04:01:53.502Z,1537675313.502 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-23T04:01:53.502Z,1537675313.502 [trackPatch:Science:PeakDetectChl] Running Loop=1
2018-09-23T04:01:53.505Z,1537675313.505 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-23T04:01:53.506Z,1537675313.506 [trackPatch:Science:Read_Oil](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-23T04:01:53.507Z,1537675313.507 [trackPatch:Science:G] Running Loop=1
2018-09-23T04:01:53.507Z,1537675313.507 [trackPatch:Science:G](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-23T04:01:53.508Z,1537675313.508 [trackPatch:Science:F] Stopped
2018-09-23T04:01:53.508Z,1537675313.508 [trackPatch:Science:E] Stopped
2018-09-23T04:01:53.508Z,1537675313.508 [trackPatch:Science:D] Stopped
2018-09-23T04:01:53.508Z,1537675313.508 [trackPatch:Science:C] Stopped
2018-09-23T04:01:53.508Z,1537675313.508 [trackPatch:Science:B] Stopped
2018-09-23T04:01:53.508Z,1537675313.508 [trackPatch:Science:A] Stopped
2018-09-23T04:01:53.509Z,1537675313.509 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-23T04:01:53.510Z,1537675313.510 [trackPatch:H.Pitch] Running Loop=1
2018-09-23T04:01:53.511Z,1537675313.511 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-23T04:01:53.512Z,1537675313.512 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-23T04:01:53.527Z,1537675313.527 [trackPatch:SurfaceCommsSplit:B] Running Loop=1
2018-09-23T04:01:53.527Z,1537675313.527 [trackPatch:SurfaceCommsSplit:B](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit:B
2018-09-23T04:01:53.528Z,1537675313.528 [trackPatch:SurfaceCommsSplit:B:A] Running Loop=1
2018-09-23T04:01:53.528Z,1537675313.528 [trackPatch:B.DepthEnvelope] Running Loop=1
2018-09-23T04:01:53.533Z,1537675313.533 [trackPatch:A.AltitudeEnvelope] Running Loop=1
2018-09-23T04:01:53.553Z,1537675313.553 [CBIT](ERROR): Communications Fault in component: RDI_Pathfinder
2018-09-23T04:01:53.693Z,1537675313.693 [RDI_Pathfinder](INFO): Powering down
2018-09-23T04:01:53.732Z,1537675313.732 [trackPatch:SurfaceCommsSplit:B:A](INFO): ##UnpackSplit##
2018-09-23T04:01:53.734Z,1537675313.734 [trackPatch:SurfaceCommsSplit:B:A] Stopped
2018-09-23T04:01:53.734Z,1537675313.734 [trackPatch:SurfaceCommsSplit:B](INFO): Completed trackPatch:SurfaceCommsSplit:B
2018-09-23T04:01:53.734Z,1537675313.734 [trackPatch:SurfaceCommsSplit:B] Stopped
2018-09-23T04:01:53.734Z,1537675313.734 [trackPatch:SurfaceCommsSplit:B](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit:B
2018-09-23T04:01:53.735Z,1537675313.735 [trackPatch:SurfaceCommsSplit:C] Running Loop=1
2018-09-23T04:01:53.735Z,1537675313.735 [trackPatch:SurfaceCommsSplit:C](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit:C
2018-09-23T04:01:53.735Z,1537675313.735 [trackPatch:SurfaceCommsSplit:C:A] Running Loop=1
2018-09-23T04:01:53.857Z,1537675313.857 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-23T04:01:53.857Z,1537675313.857 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-23T04:01:54.028Z,1537675314.028 [trackPatch:M.YoYo] Preempted
2018-09-23T04:01:54.028Z,1537675314.028 [trackPatch:L.DepthEnvelope] Preempted
2018-09-23T04:01:54.028Z,1537675314.028 [trackPatch:K.SetSpeed] Preempted
2018-09-23T04:01:54.029Z,1537675314.029 [trackPatch:Science] Preempted
2018-09-23T04:01:54.033Z,1537675314.033 [trackPatch:Science:G] Preempted
2018-09-23T04:01:54.033Z,1537675314.033 [trackPatch:Science:Read_Oil] Preempted
2018-09-23T04:01:54.033Z,1537675314.033 [trackPatch:Science:PeakDetectChl] Preempted
2018-09-23T04:01:54.033Z,1537675314.033 [trackPatch:I.Buoyancy] Preempted
2018-09-23T04:01:54.033Z,1537675314.033 [trackPatch:H.Pitch] Preempted
2018-09-23T04:01:54.033Z,1537675314.033 [trackPatch:G.WaterDepthEnvelope] Preempted
2018-09-23T04:01:54.033Z,1537675314.033 [trackPatch:F.OffshoreEnvelope] Preempted
2018-09-23T04:01:54.034Z,1537675314.034 [trackPatch:SurfaceCommsSplit:C:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-23T04:01:54.383Z,1537675314.383 [NAL9602](INFO): Powering up
2018-09-23T04:01:54.440Z,1537675314.440 [CBIT](INFO): Clearing failed state for component RDI_Pathfinder
2018-09-23T04:01:54.440Z,1537675314.440 [RDI_Pathfinder] No Fault, FailCount= 1
2018-09-23T04:01:56.029Z,1537675316.029 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-23T04:02:05.590Z,1537675325.590 [NAL9602](INFO): NAL9602 initialized
2018-09-23T04:02:08.008Z,1537675328.008 [RDI_Pathfinder](ERROR): Failed to parse:Pathfinder
2018-09-23T04:02:21.184Z,1537675341.184 [NAL9602](INFO): SBD MO Status=0, MOMSN=1201, MT Status=0, MTMSN=0
2018-09-23T04:02:21.184Z,1537675341.184 [NAL9602](INFO): No messages in MT queue
2018-09-23T04:03:19.318Z,1537675399.318 [NAL9602](INFO): GPS fix at 20180923T040308: (36.838170, -121.899139)
2018-09-23T04:03:19.374Z,1537675399.374 [trackPatch:SurfaceCommsSplit:C:A] Stopped
2018-09-23T04:03:19.375Z,1537675399.375 [trackPatch:SurfaceCommsSplit:C:B] Running Loop=1
2018-09-23T04:03:19.792Z,1537675399.792 [trackPatch:SurfaceCommsSplit:C:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-23T04:03:27.999Z,1537675407.999 [DataOverHttps](INFO): Sending 62 bytes from file Logs/20180922T190757/Courier0114.lzma
2018-09-23T04:03:28.797Z,1537675408.797 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0114.lzma.bak
2018-09-23T04:03:28.798Z,1537675408.798 [DataOverHttps](INFO): SBD MOMSN=8564645
2018-09-23T04:03:40.908Z,1537675420.908 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180922T190757/Courier0117.lzma
2018-09-23T04:03:41.660Z,1537675421.660 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0117.lzma.bak
2018-09-23T04:03:41.660Z,1537675421.660 [DataOverHttps](INFO): SBD MOMSN=8564648
2018-09-23T04:03:51.467Z,1537675431.467 [NAL9602](INFO): Powering down
2018-09-23T04:03:55.011Z,1537675435.011 [DataOverHttps](INFO): Sending 303 bytes from file Logs/20180922T190757/Express0115.lzma
2018-09-23T04:03:55.786Z,1537675435.786 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0115.lzma.bak
2018-09-23T04:03:55.786Z,1537675435.786 [DataOverHttps](INFO): SBD MOMSN=8564650
2018-09-23T04:04:15.512Z,1537675455.512 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180922T190757/Express0118.lzma
2018-09-23T04:04:17.503Z,1537675457.503 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0118.lzma.bak
2018-09-23T04:04:17.503Z,1537675457.503 [DataOverHttps](INFO): SBD MOMSN=8564665
2018-09-23T04:04:18.045Z,1537675458.045 [trackPatch:SurfaceCommsSplit:C:B] Stopped
2018-09-23T04:04:18.046Z,1537675458.046 [trackPatch:SurfaceCommsSplit:C:C] Running Loop=1
2018-09-23T04:04:18.362Z,1537675458.362 [trackPatch:SurfaceCommsSplit:C:C](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-23T04:04:18.711Z,1537675458.711 [NAL9602](INFO): Powering up
2018-09-23T04:04:29.778Z,1537675469.778 [NAL9602](INFO): NAL9602 initialized
2018-09-23T04:05:22.420Z,1537675522.420 [NAL9602](INFO): SBD MO Status=0, MOMSN=1202, MT Status=0, MTMSN=0
2018-09-23T04:05:22.420Z,1537675522.420 [NAL9602](INFO): No messages in MT queue
2018-09-23T04:08:13.139Z,1537675693.139 [NAL9602](INFO): GPS fix at 20180923T040803: (36.838466, -121.899347)
2018-09-23T04:08:13.202Z,1537675693.202 [trackPatch:SurfaceCommsSplit:C:C] Stopped
2018-09-23T04:08:13.202Z,1537675693.202 [trackPatch:SurfaceCommsSplit:C](INFO): Completed trackPatch:SurfaceCommsSplit:C
2018-09-23T04:08:13.202Z,1537675693.202 [trackPatch:SurfaceCommsSplit:C] Stopped
2018-09-23T04:08:13.202Z,1537675693.202 [trackPatch:SurfaceCommsSplit:C](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit:C
2018-09-23T04:08:13.203Z,1537675693.203 [trackPatch:SurfaceCommsSplit](INFO): Completed trackPatch:SurfaceCommsSplit
2018-09-23T04:08:13.204Z,1537675693.204 [trackPatch:SurfaceCommsSplit] Stopped
2018-09-23T04:08:13.204Z,1537675693.204 [trackPatch:SurfaceCommsSplit](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit
2018-09-23T04:08:13.204Z,1537675693.204 [trackPatch:SurfaceCommsSplit:A.GoToSurface] Stopped
2018-09-23T04:08:13.204Z,1537675693.204 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-23T04:08:13.204Z,1537675693.204 [trackPatch:PatchDetectHorizontal] Running Loop=1
2018-09-23T04:08:13.204Z,1537675693.204 [trackPatch:PatchDetectHorizontal](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal
2018-09-23T04:08:13.204Z,1537675693.204 [trackPatch:PatchDetectHorizontal:AssignPatchDetectOn] Running Loop=1
2018-09-23T04:08:13.600Z,1537675693.600 [trackPatch:PatchDetectHorizontal:AssignPatchDetectOn] Stopped
2018-09-23T04:08:13.600Z,1537675693.600 [trackPatch:PatchDetectHorizontal:C] Running Loop=1
2018-09-23T04:08:13.600Z,1537675693.600 [trackPatch:M.YoYo] Running Loop=1
2018-09-23T04:08:13.601Z,1537675693.601 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-23T04:08:13.602Z,1537675693.602 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-23T04:08:13.602Z,1537675693.602 [trackPatch:Science] Running Loop=1
2018-09-23T04:08:13.604Z,1537675693.604 [trackPatch:Science:PeakDetectChl] Running Loop=1
2018-09-23T04:08:13.604Z,1537675693.604 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-23T04:08:13.605Z,1537675693.605 [trackPatch:Science:G] Running Loop=1
2018-09-23T04:08:13.605Z,1537675693.605 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-23T04:08:13.606Z,1537675693.606 [trackPatch:H.Pitch] Running Loop=1
2018-09-23T04:08:13.606Z,1537675693.606 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-23T04:08:13.606Z,1537675693.606 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-23T04:08:13.981Z,1537675693.981 [ElevatorOffsetCalculator](INFO): Removing expired estimator for commanded vars: speed 1.00 m/s, pitch -20.00 deg, mass-position 0.00 mm.
2018-09-23T04:08:13.982Z,1537675693.982 [ElevatorOffsetCalculator](INFO): Removing expired estimator for commanded vars: speed 1.00 m/s, pitch 20.00 deg, mass-position 0.00 mm.
2018-09-23T04:08:13.996Z,1537675693.996 [trackPatch:PatchDetectHorizontal:C](IMPORTANT): Next: bearing for CrossLeg: -90.000000 arcdeg . WpMaxDistance = 1000.000000 m . Current lat, lon = 36.838466 arcdeg , -121.899346 arcdeg .
2018-09-23T04:08:14.001Z,1537675694.001 [trackPatch:PatchDetectHorizontal:C] Stopped
2018-09-23T04:08:14.001Z,1537675694.001 [trackPatch:PatchDetectHorizontal:CrossLeg] Running Loop=1
2018-09-23T04:08:14.001Z,1537675694.001 [trackPatch:PatchDetectHorizontal:CrossLeg](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal:CrossLeg
2018-09-23T04:08:14.001Z,1537675694.001 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint] Running Loop=1
2018-09-23T04:08:14.002Z,1537675694.002 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-23T04:08:14.002Z,1537675694.002 [trackPatch:PatchDetectHorizontal:PatchDetection] Running Loop=1
2018-09-23T04:08:14.002Z,1537675694.002 [trackPatch:PatchDetectHorizontal:PatchDetection](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal:PatchDetection
2018-09-23T04:08:14.003Z,1537675694.003 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal] Running Loop=1
2018-09-23T04:08:14.003Z,1537675694.003 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](INFO): Initialize.
2018-09-23T04:08:14.005Z,1537675694.005 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-23T04:08:14.005Z,1537675694.005 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-23T04:08:14.382Z,1537675694.382 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint] Stopped
2018-09-23T04:08:14.382Z,1537675694.382 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-23T04:08:14.383Z,1537675694.383 [trackPatch:PatchDetectHorizontal:CrossLeg:B] Running Loop=1
2018-09-23T04:08:14.383Z,1537675694.383 [trackPatch:PatchDetectHorizontal:CrossLeg:B](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal:CrossLeg:B
2018-09-23T04:08:14.792Z,1537675694.792 [trackPatch:SurfaceComms] Running Loop=1
2018-09-23T04:08:14.792Z,1537675694.792 [trackPatch:SurfaceComms](DEBUG): Aggregate::initialize trackPatch:SurfaceComms
2018-09-23T04:08:14.792Z,1537675694.792 [trackPatch:SurfaceComms:SurfaceComms] Running Loop=1
2018-09-23T04:08:14.792Z,1537675694.792 [trackPatch:SurfaceComms:SurfaceComms](DEBUG): Aggregate::initialize trackPatch:SurfaceComms:SurfaceComms
2018-09-23T04:08:14.792Z,1537675694.792 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface] Running Loop=1
2018-09-23T04:08:14.793Z,1537675694.793 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T04:08:14.793Z,1537675694.793 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-23T04:08:14.794Z,1537675694.794 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-23T04:08:14.794Z,1537675694.794 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-23T04:08:14.795Z,1537675694.795 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T04:08:14.795Z,1537675694.795 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T04:08:14.819Z,1537675694.819 [trackPatch:SurfaceComms:SurfaceComms:B] Running Loop=1
2018-09-23T04:08:14.819Z,1537675694.819 [trackPatch:SurfaceComms:SurfaceComms:B](DEBUG): Aggregate::initialize trackPatch:SurfaceComms:SurfaceComms:B
2018-09-23T04:08:14.819Z,1537675694.819 [trackPatch:SurfaceComms:SurfaceComms:B:A] Running Loop=1
2018-09-23T04:08:15.226Z,1537675695.226 [trackPatch:SurfaceComms:SurfaceComms:B] Stopped
2018-09-23T04:08:15.227Z,1537675695.227 [trackPatch:SurfaceComms:SurfaceComms:B](DEBUG): Aggregate::uninitialize trackPatch:SurfaceComms:SurfaceComms:B
2018-09-23T04:08:15.227Z,1537675695.227 [trackPatch:SurfaceComms:SurfaceComms:B:A] Stopped
2018-09-23T04:08:15.227Z,1537675695.227 [trackPatch:SurfaceComms:SurfaceComms:C] Running Loop=1
2018-09-23T04:08:15.227Z,1537675695.227 [trackPatch:SurfaceComms:SurfaceComms:C](DEBUG): Aggregate::initialize trackPatch:SurfaceComms:SurfaceComms:C
2018-09-23T04:08:15.227Z,1537675695.227 [trackPatch:SurfaceComms:SurfaceComms:C:A] Running Loop=1
2018-09-23T04:08:15.610Z,1537675695.610 [trackPatch:M.YoYo] Preempted
2018-09-23T04:08:15.610Z,1537675695.610 [trackPatch:L.DepthEnvelope] Preempted
2018-09-23T04:08:15.610Z,1537675695.610 [trackPatch:K.SetSpeed] Preempted
2018-09-23T04:08:15.610Z,1537675695.610 [trackPatch:Science] Preempted
2018-09-23T04:08:15.611Z,1537675695.611 [trackPatch:Science:G] Preempted
2018-09-23T04:08:15.611Z,1537675695.611 [trackPatch:Science:Read_Oil] Preempted
2018-09-23T04:08:15.611Z,1537675695.611 [trackPatch:Science:PeakDetectChl] Preempted
2018-09-23T04:08:15.611Z,1537675695.611 [trackPatch:I.Buoyancy] Preempted
2018-09-23T04:08:15.611Z,1537675695.611 [trackPatch:H.Pitch] Preempted
2018-09-23T04:08:15.611Z,1537675695.611 [trackPatch:G.WaterDepthEnvelope] Preempted
2018-09-23T04:08:15.611Z,1537675695.611 [trackPatch:F.OffshoreEnvelope] Preempted
2018-09-23T04:08:15.612Z,1537675695.612 [trackPatch:SurfaceComms:SurfaceComms:C:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-23T04:08:16.169Z,1537675696.169 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-23T04:08:17.570Z,1537675697.570 [NAL9602](INFO): GPS fix at 20180923T040807: (36.838468, -121.899354)
2018-09-23T04:08:17.629Z,1537675697.629 [trackPatch:SurfaceComms:SurfaceComms:C:A] Stopped
2018-09-23T04:08:17.630Z,1537675697.630 [trackPatch:SurfaceComms:SurfaceComms:C:B] Running Loop=1
2018-09-23T04:08:18.050Z,1537675698.050 [trackPatch:SurfaceComms:SurfaceComms:C:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-23T04:08:22.578Z,1537675702.578 [DataOverHttps](INFO): Sending 64 bytes from file Logs/20180922T190757/Courier0120.lzma
2018-09-23T04:08:24.169Z,1537675704.169 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0120.lzma.bak
2018-09-23T04:08:24.170Z,1537675704.170 [DataOverHttps](IMPORTANT): SBD MOMSN=8564670, MTMSN=20180923T040813
2018-09-23T04:08:28.413Z,1537675708.413 [DataOverHttps](INFO): Received command:stop
2018-09-23T04:08:28.493Z,1537675708.493 [CommandLine](IMPORTANT): got command stop
2018-09-23T04:08:28.493Z,1537675708.493 [Supervisor](INFO): Stop Mission called by CommandLine::commandStop
2018-09-23T04:08:29.018Z,1537675709.018 [MissionManager](INFO): MissionManager is completed.
2018-09-23T04:08:29.019Z,1537675709.019 [MissionManager](INFO): Uninitializing Mission trackPatch
2018-09-23T04:08:29.019Z,1537675709.019 [trackPatch] Stopped
2018-09-23T04:08:29.019Z,1537675709.019 [trackPatch](DEBUG): Aggregate::uninitialize trackPatch
2018-09-23T04:08:29.019Z,1537675709.019 [trackPatch:A.AltitudeEnvelope] Stopped
2018-09-23T04:08:29.019Z,1537675709.019 [trackPatch:A.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-23T04:08:29.019Z,1537675709.019 [trackPatch:B.DepthEnvelope] Stopped
2018-09-23T04:08:29.019Z,1537675709.019 [trackPatch:B.DepthEnvelope](DEBUG): Uninitialize.
2018-09-23T04:08:29.019Z,1537675709.019 [trackPatch:SurfaceComms] Stopped
2018-09-23T04:08:29.019Z,1537675709.019 [trackPatch:SurfaceComms](DEBUG): Aggregate::uninitialize trackPatch:SurfaceComms
2018-09-23T04:08:29.020Z,1537675709.020 [trackPatch:SurfaceComms:SurfaceComms] Stopped
2018-09-23T04:08:29.020Z,1537675709.020 [trackPatch:SurfaceComms:SurfaceComms](DEBUG): Aggregate::uninitialize trackPatch:SurfaceComms:SurfaceComms
2018-09-23T04:08:29.020Z,1537675709.020 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface] Stopped
2018-09-23T04:08:29.020Z,1537675709.020 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-23T04:08:29.020Z,1537675709.020 [trackPatch:SurfaceComms:SurfaceComms:C] Stopped
2018-09-23T04:08:29.020Z,1537675709.020 [trackPatch:SurfaceComms:SurfaceComms:C](DEBUG): Aggregate::uninitialize trackPatch:SurfaceComms:SurfaceComms:C
2018-09-23T04:08:29.020Z,1537675709.020 [trackPatch:SurfaceComms:SurfaceComms:C:B] Stopped
2018-09-23T04:08:29.020Z,1537675709.020 [trackPatch:F.OffshoreEnvelope] Stopped
2018-09-23T04:08:29.020Z,1537675709.020 [trackPatch:F.OffshoreEnvelope](DEBUG): Uninitialize OffshoreEnvelopeComponent.
2018-09-23T04:08:29.020Z,1537675709.020 [trackPatch:G.WaterDepthEnvelope] Stopped
2018-09-23T04:08:29.021Z,1537675709.021 [trackPatch:G.WaterDepthEnvelope](DEBUG): Uninitialize WaterDepthEnvelopeComponent.
2018-09-23T04:08:29.021Z,1537675709.021 [trackPatch:H.Pitch] Stopped
2018-09-23T04:08:29.021Z,1537675709.021 [trackPatch:I.Buoyancy] Stopped
2018-09-23T04:08:29.021Z,1537675709.021 [trackPatch:I.Buoyancy](DEBUG): Uninitialize Buoyancy Component.
2018-09-23T04:08:29.021Z,1537675709.021 [trackPatch:Science] Stopped
2018-09-23T04:08:29.021Z,1537675709.021 [trackPatch:Science](DEBUG): Aggregate::uninitialize trackPatch:Science
2018-09-23T04:08:29.021Z,1537675709.021 [trackPatch:Science:G] Stopped
2018-09-23T04:08:29.021Z,1537675709.021 [trackPatch:Science:Read_Oil] Stopped
2018-09-23T04:08:29.021Z,1537675709.021 [trackPatch:Science:PeakDetectChl] Stopped
2018-09-23T04:08:29.021Z,1537675709.021 [trackPatch:Science:PeakDetectChl](DEBUG): Aggregate::uninitialize trackPatch:Science:PeakDetectChl
2018-09-23T04:08:29.022Z,1537675709.022 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2018-09-23T04:08:29.022Z,1537675709.022 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-23T04:08:29.022Z,1537675709.022 [trackPatch:K.SetSpeed] Stopped
2018-09-23T04:08:29.022Z,1537675709.022 [trackPatch:K.SetSpeed](DEBUG): Uninitialize.
2018-09-23T04:08:29.022Z,1537675709.022 [trackPatch:L.DepthEnvelope] Stopped
2018-09-23T04:08:29.022Z,1537675709.022 [trackPatch:L.DepthEnvelope](DEBUG): Uninitialize.
2018-09-23T04:08:29.022Z,1537675709.022 [trackPatch:M.YoYo] Stopped
2018-09-23T04:08:29.022Z,1537675709.022 [trackPatch:M.YoYo](DEBUG): Uninitialize YoYoComponent.
2018-09-23T04:08:29.022Z,1537675709.022 [trackPatch:PatchDetectHorizontal] Stopped
2018-09-23T04:08:29.022Z,1537675709.022 [trackPatch:PatchDetectHorizontal](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal
2018-09-23T04:08:29.022Z,1537675709.022 [trackPatch:PatchDetectHorizontal:PatchDetection] Stopped
2018-09-23T04:08:29.023Z,1537675709.023 [trackPatch:PatchDetectHorizontal:PatchDetection](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal:PatchDetection
2018-09-23T04:08:29.023Z,1537675709.023 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal] Stopped
2018-09-23T04:08:29.023Z,1537675709.023 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-23T04:08:29.023Z,1537675709.023 [trackPatch:PatchDetectHorizontal:CrossLeg] Stopped
2018-09-23T04:08:29.023Z,1537675709.023 [trackPatch:PatchDetectHorizontal:CrossLeg](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal:CrossLeg
2018-09-23T04:08:29.023Z,1537675709.023 [trackPatch:PatchDetectHorizontal:CrossLeg:B] Stopped
2018-09-23T04:08:29.023Z,1537675709.023 [trackPatch:PatchDetectHorizontal:CrossLeg:B](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal:CrossLeg:B
2018-09-23T04:08:29.244Z,1537675709.244 [MissionManager](IMPORTANT): Started mission Default
2018-09-23T04:08:29.249Z,1537675709.249 [Default] Running Loop=1
2018-09-23T04:08:29.249Z,1537675709.249 [Default](DEBUG): Aggregate::initialize Default
2018-09-23T04:08:29.249Z,1537675709.249 [Default:B.GoToSurface] Running Loop=1
2018-09-23T04:08:29.249Z,1537675709.249 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T04:08:29.250Z,1537675709.250 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-23T04:08:29.250Z,1537675709.250 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-23T04:08:29.250Z,1537675709.250 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-23T04:08:29.251Z,1537675709.251 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T04:08:29.251Z,1537675709.251 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T04:08:29.251Z,1537675709.251 [Default:A.Wait] Running Loop=1
2018-09-23T04:08:29.251Z,1537675709.251 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-23T04:08:33.715Z,1537675713.715 [DataOverHttps](INFO): Sending 202 bytes from file Logs/20180922T190757/Express0121.lzma
2018-09-23T04:08:34.474Z,1537675714.474 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0121.lzma.bak
2018-09-23T04:08:34.474Z,1537675714.474 [DataOverHttps](INFO): SBD MOMSN=8564674
2018-09-23T04:08:42.537Z,1537675722.537 [Default:A.Wait](INFO): Done Waiting.
2018-09-23T04:08:42.537Z,1537675722.537 [Default:A.Wait] Stopped
2018-09-23T04:08:42.537Z,1537675722.537 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-23T04:08:42.946Z,1537675722.946 [Default:CheckIn] Running Loop=1
2018-09-23T04:08:42.946Z,1537675722.946 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-23T04:08:42.946Z,1537675722.946 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-23T04:08:44.894Z,1537675724.894 [NAL9602](INFO): GPS fix at 20180923T040834: (36.838505, -121.899362)
2018-09-23T04:08:44.955Z,1537675724.955 [Default:CheckIn:Read_GPS] Stopped
2018-09-23T04:08:44.955Z,1537675724.955 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-23T04:08:55.029Z,1537675735.029 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180922T190757/Courier0123.lzma
2018-09-23T04:08:55.799Z,1537675735.799 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0123.lzma.bak
2018-09-23T04:08:55.799Z,1537675735.799 [DataOverHttps](INFO): SBD MOMSN=8564677
2018-09-23T04:09:05.358Z,1537675745.358 [DataOverHttps](INFO): Sending 64 bytes from file Logs/20180922T190757/Courier0126.lzma
2018-09-23T04:09:06.134Z,1537675746.134 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0126.lzma.bak
2018-09-23T04:09:06.134Z,1537675746.134 [DataOverHttps](INFO): SBD MOMSN=8564679
2018-09-23T04:09:15.290Z,1537675755.290 [DataOverHttps](INFO): Sending 128 bytes from file Logs/20180922T190757/Express0124.lzma
2018-09-23T04:09:16.080Z,1537675756.080 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0124.lzma.bak
2018-09-23T04:09:16.080Z,1537675756.080 [DataOverHttps](INFO): SBD MOMSN=8564682
2018-09-23T04:09:22.554Z,1537675762.554 [NAL9602](INFO): Powering down
2018-09-23T04:09:34.073Z,1537675774.073 [DataOverHttps](INFO): Sending 94 bytes from file Logs/20180922T190757/Express0127.lzma
2018-09-23T04:09:34.556Z,1537675774.556 [BPC1](ERROR): BPC1B failed to parse battery data due to unrecognized msg size.
2018-09-23T04:09:34.871Z,1537675774.871 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0127.lzma.bak
2018-09-23T04:09:34.872Z,1537675774.872 [DataOverHttps](INFO): SBD MOMSN=8564686
2018-09-23T04:09:35.447Z,1537675775.447 [Default:CheckIn:Read_Iridium] Stopped
2018-09-23T04:09:35.447Z,1537675775.447 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-23T04:09:35.447Z,1537675775.447 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-23T04:09:51.166Z,1537675791.166 [BPC1](INFO): Calculating totals. Valid battery stick count: 56. Valid reserve battery stick count: 6.
2018-09-23T04:13:32.100Z,1537676012.100 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for altitude
2018-09-23T04:13:32.100Z,1537676012.100 [RDI_Pathfinder](ERROR): Failed to parse:
:BD,     ,        +0.00,        +0.00,   0.00,683.98
2018-09-23T04:14:35.858Z,1537676075.858 [Default:CheckIn:C.Wait](INFO): Done Waiting.
2018-09-23T04:14:35.859Z,1537676075.859 [Default:CheckIn:C.Wait] Stopped
2018-09-23T04:14:35.859Z,1537676075.859 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-23T04:14:35.859Z,1537676075.859 [Default:CheckIn:D] Running Loop=1
2018-09-23T04:14:36.265Z,1537676076.265 [Default:CheckIn:D] Stopped
2018-09-23T04:14:36.265Z,1537676076.265 [Default:CheckIn:E] Running Loop=1
2018-09-23T04:14:36.659Z,1537676076.659 [Default:CheckIn:E](IMPORTANT): Default mission has been running for 6.116996 min 
2018-09-23T04:14:36.660Z,1537676076.660 [Default:CheckIn:E] Stopped
2018-09-23T04:14:36.660Z,1537676076.660 [Default:CheckIn](INFO): Completed Default:CheckIn
2018-09-23T04:14:36.660Z,1537676076.660 [Default:CheckIn] Stopped
2018-09-23T04:14:36.660Z,1537676076.660 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-23T04:14:36.660Z,1537676076.660 [Default:CheckIn](INFO): Running loop #2
2018-09-23T04:14:36.660Z,1537676076.660 [Default:CheckIn] Running Loop=2
2018-09-23T04:14:36.665Z,1537676076.665 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-23T04:14:36.665Z,1537676076.665 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-23T04:14:40.006Z,1537676080.006 [NAL9602](INFO): Powering up
2018-09-23T04:14:51.147Z,1537676091.147 [NAL9602](INFO): NAL9602 initialized
2018-09-23T04:15:16.756Z,1537676116.756 [NAL9602](INFO): SBD MO Status=2, MOMSN=1203, MT Status=2, MTMSN=0
2018-09-23T04:15:16.756Z,1537676116.756 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-23T04:15:40.848Z,1537676140.848 [NAL9602](INFO): SBD MO Status=2, MOMSN=1203, MT Status=2, MTMSN=0
2018-09-23T04:15:40.849Z,1537676140.849 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-23T04:15:43.362Z,1537676143.362 [DataOverHttps](IMPORTANT): SBD MTMSN=20180923T041532
2018-09-23T04:15:49.123Z,1537676149.123 [DataOverHttps](INFO): Received command:load Science/trackPatch.xml;set trackPatch.MissionTimeout 30 min;set trackPatch.YoYoMinDepth 2 m;set trackPatch.YoYoMaxDepth 10 m;set trackPatch.PeakChlShallowBnd 3 m;set trackPatch.PeakChlDeepBnd 8 m;run
2018-09-23T04:15:49.150Z,1537676149.150 [CommandLine](IMPORTANT): got command load ./Missions/Science/trackPatch.xml
2018-09-23T04:15:49.150Z,1537676149.150 [MissionManager](INFO): Loading Mission: ./Missions/Science/trackPatch.xml
2018-09-23T04:15:49.368Z,1537676149.368 [MissionManager](INFO): DefineArg trackPatch.MinAltitude = 5.000000 m
2018-09-23T04:15:49.370Z,1537676149.370 [MissionManager](INFO): DefineArg trackPatch.MaxDepth = 65.000000 m
2018-09-23T04:15:49.372Z,1537676149.372 [MissionManager](INFO): DefineArg trackPatch.MinWaterDepth = 10.000000 m
2018-09-23T04:15:49.374Z,1537676149.374 [MissionManager](INFO): DefineArg trackPatch.MinOffshore = 2000.000000 m
2018-09-23T04:15:49.377Z,1537676149.377 [MissionManager](INFO): DefineArg trackPatch.NeedCommsTime = 180.000000 min
2018-09-23T04:15:49.379Z,1537676149.379 [MissionManager](INFO): DefineArg trackPatch.MissionTimeout = 56.000000 h
2018-09-23T04:15:49.381Z,1537676149.381 [MissionManager](INFO): DefineArg trackPatch.MassDefault = 0.000000 cm
2018-09-23T04:15:49.384Z,1537676149.384 [MissionManager](INFO): DefineArg trackPatch.BuoyancyNeutral = 205.000004 cc
2018-09-23T04:15:49.386Z,1537676149.386 [MissionManager](INFO): DefineArg trackPatch.YoYoMinDepth = 2.000000 m
2018-09-23T04:15:49.388Z,1537676149.388 [MissionManager](INFO): DefineArg trackPatch.YoYoMaxDepth = 10.000000 m
2018-09-23T04:15:49.390Z,1537676149.390 [MissionManager](INFO): DefineArg trackPatch.YoYoUpPitch = 20.000000 arcdeg
2018-09-23T04:15:49.393Z,1537676149.393 [MissionManager](INFO): DefineArg trackPatch.YoYoDownPitch = -20.000000 arcdeg
2018-09-23T04:15:49.395Z,1537676149.395 [MissionManager](INFO): DefineArg trackPatch.Speed = 1.000000 m/s
2018-09-23T04:15:49.397Z,1537676149.397 [MissionManager](INFO): DefineArg trackPatch.WpMaxDistance = 1000.000000 m
2018-09-23T04:15:49.399Z,1537676149.399 [MissionManager](INFO): DefineArg trackPatch.WpTimeout = 8000.000000 s
2018-09-23T04:15:49.401Z,1537676149.401 [MissionManager](INFO): DefineArg trackPatch.WaterFrame = 1 bool
2018-09-23T04:15:49.403Z,1537676149.403 [MissionManager](INFO): DefineArg trackPatch.Repeat = 20.000000 count
2018-09-23T04:15:49.406Z,1537676149.406 [MissionManager](INFO): DefineArg trackPatch.Turn = 90.000000 arcdeg
2018-09-23T04:15:49.408Z,1537676149.408 [MissionManager](INFO): DefineArg trackPatch.Reverse = 180.000000 arcdeg
2018-09-23T04:15:49.410Z,1537676149.410 [MissionManager](INFO): DefineArg trackPatch.TwoPi = 360.000000 arcdeg
2018-09-23T04:15:49.412Z,1537676149.412 [MissionManager](INFO): DefineArg trackPatch.LowPassWindowLen = 20.000000 count
2018-09-23T04:15:49.471Z,1537676149.471 [MissionManager](INFO): DefineArg trackPatch.PeakChlShallowBnd = 3.000000 m
2018-09-23T04:15:49.473Z,1537676149.473 [MissionManager](INFO): DefineArg trackPatch.PeakChlDeepBnd = 8.000000 m
2018-09-23T04:15:49.476Z,1537676149.476 [MissionManager](INFO): DefineArg trackPatch.FilterWidth = 4.000000 count
2018-09-23T04:15:49.486Z,1537676149.486 [MissionManager](INFO): DefineArg trackPatch.BeginThreshold = nan ug/l
2018-09-23T04:15:49.488Z,1537676149.488 [MissionManager](INFO): DefineArg trackPatch.OffPeakFraction = 80.000000 %
2018-09-23T04:15:49.495Z,1537676149.495 [MissionManager](INFO): DefineArg trackPatch.PatchMode = 0 bool
2018-09-23T04:15:49.501Z,1537676149.501 [MissionManager](INFO): DefineArg trackPatch.WpBearing = -90.000000 arcdeg
2018-09-23T04:15:49.503Z,1537676149.503 [MissionManager](INFO): DefineOutput trackPatch.PatchDetectOn = 0 bool
2018-09-23T04:15:49.510Z,1537676149.510 [MissionManager](INFO): DefineOutput trackPatch.WpDone = 0 bool
2018-09-23T04:15:49.512Z,1537676149.512 [MissionManager](INFO): DefineOutput trackPatch.PatchChl = nan ug/l
2018-09-23T04:15:49.519Z,1537676149.519 [MissionManager](INFO): DefineOutput trackPatch.PatchChlDepth = nan m
2018-09-23T04:15:49.525Z,1537676149.525 [MissionManager](INFO): DefineOutput trackPatch.PatchChlLatitude = nan arcdeg
2018-09-23T04:15:49.528Z,1537676149.528 [MissionManager](INFO): DefineOutput trackPatch.PatchChlLongitude = nan arcdeg
2018-09-23T04:15:49.542Z,1537676149.542 [MissionManager](INFO): DefineOutput trackPatch.PatchChlDistance = 0.000000 m
2018-09-23T04:15:49.543Z,1537676149.543 [trackPatch:A.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-23T04:15:49.552Z,1537676149.552 [trackPatch:B.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-23T04:15:49.570Z,1537676149.570 [MissionManager](INFO): Inserting Stack: Missions/Insert/Surface.xml
2018-09-23T04:15:49.629Z,1537676149.629 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.SurfaceDepthRate = nan m/s
2018-09-23T04:15:49.632Z,1537676149.632 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.SurfacePitch = 20.000000 arcdeg
2018-09-23T04:15:49.638Z,1537676149.638 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.SurfaceSpeed = 1.000000 m/s
2018-09-23T04:15:49.649Z,1537676149.649 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.IridiumTimeout = 30.000000 min
2018-09-23T04:15:49.651Z,1537676149.651 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.UnpackSplitAtSurface = 0 bool
2018-09-23T04:15:49.652Z,1537676149.652 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-23T04:15:49.700Z,1537676149.700 [MissionManager](INFO): RedefineArg trackPatch:SurfaceCommsSplit.SurfacePitch = value:20.000000 arcdeg
2018-09-23T04:15:49.721Z,1537676149.721 [MissionManager](INFO): RedefineArg trackPatch:SurfaceCommsSplit.SurfaceSpeed = value:1.000000 m/s
2018-09-23T04:15:49.723Z,1537676149.723 [MissionManager](INFO): RedefineArg trackPatch:SurfaceCommsSplit.UnpackSplitAtSurface = value:1 bool
2018-09-23T04:15:49.724Z,1537676149.724 [MissionManager](INFO): Inserting Stack: Missions/Insert/Surface.xml
2018-09-23T04:15:49.775Z,1537676149.775 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.SurfaceDepthRate = nan m/s
2018-09-23T04:15:49.778Z,1537676149.778 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.SurfacePitch = 20.000000 arcdeg
2018-09-23T04:15:49.780Z,1537676149.780 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.SurfaceSpeed = 1.000000 m/s
2018-09-23T04:15:49.792Z,1537676149.792 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.IridiumTimeout = 30.000000 min
2018-09-23T04:15:49.795Z,1537676149.795 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.UnpackSplitAtSurface = 0 bool
2018-09-23T04:15:49.796Z,1537676149.796 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-23T04:15:49.843Z,1537676149.843 [MissionManager](INFO): RedefineArg trackPatch:SurfaceComms:SurfaceComms.SurfacePitch = value:20.000000 arcdeg
2018-09-23T04:15:49.864Z,1537676149.864 [MissionManager](INFO): RedefineArg trackPatch:SurfaceComms:SurfaceComms.SurfaceSpeed = value:1.000000 m/s
2018-09-23T04:15:49.888Z,1537676149.888 [trackPatch:F.OffshoreEnvelope](DEBUG): Construct OffshoreEnvelope.
2018-09-23T04:15:49.909Z,1537676149.909 [trackPatch:G.WaterDepthEnvelope](DEBUG): Construct WaterDepthEnvelope.
2018-09-23T04:15:49.914Z,1537676149.914 [trackPatch:H.Pitch](DEBUG): Construct.
2018-09-23T04:15:49.918Z,1537676149.918 [trackPatch:I.Buoyancy](DEBUG): Construct Buoyancy.
2018-09-23T04:15:49.919Z,1537676149.919 [MissionManager](INFO): Inserting Stack: Missions/Insert/Science.xml
2018-09-23T04:15:50.078Z,1537676150.078 [MissionManager](INFO): DefineArg trackPatch:Science.SampleISUS = 0 bool
2018-09-23T04:15:50.080Z,1537676150.080 [MissionManager](INFO): DefineArg trackPatch:Science.SampleISUSmaxPitch = 60.000000 arcdeg
2018-09-23T04:15:50.082Z,1537676150.082 [MissionManager](INFO): DefineArg trackPatch:Science.SampleISUSminPitch = -60.000000 arcdeg
2018-09-23T04:15:50.084Z,1537676150.084 [MissionManager](INFO): DefineArg trackPatch:Science.PeakDetectChlActive = 0 bool
2018-09-23T04:15:50.086Z,1537676150.086 [MissionManager](INFO): DefineArg trackPatch:Science.HighestChlPeakReportActive = 0 bool
2018-09-23T04:15:50.088Z,1537676150.088 [MissionManager](INFO): DefineArg trackPatch:Science.PatchTracking = 1 bool
2018-09-23T04:15:50.090Z,1537676150.090 [MissionManager](INFO): DefineArg trackPatch:Science.FilterWidthHorizontal = 3.000000 count
2018-09-23T04:15:50.092Z,1537676150.092 [MissionManager](INFO): DefineArg trackPatch:Science.NumProfilesSlidingwindow = 100.000000 count
2018-09-23T04:15:50.095Z,1537676150.095 [MissionManager](INFO): DefineArg trackPatch:Science.OffPeakFractionHorizontal = 80.000000 %
2018-09-23T04:15:50.096Z,1537676150.096 [MissionManager](INFO): DefineArg trackPatch:Science.PeakDetectNO3Active = 0 bool
2018-09-23T04:15:50.098Z,1537676150.098 [MissionManager](INFO): DefineArg trackPatch:Science.PeakDetectOilActive = 0 bool
2018-09-23T04:15:50.100Z,1537676150.100 [MissionManager](INFO): DefineArg trackPatch:Science.UpwardDerivativeOfTemperatureActive = 0 bool
2018-09-23T04:15:50.103Z,1537676150.103 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledAanderaaO2 = 0.000000 bool
2018-09-23T04:15:50.105Z,1537676150.105 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledNeilBrown = 0.000000 bool
2018-09-23T04:15:50.108Z,1537676150.108 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledSeabird = 0.000000 bool
2018-09-23T04:15:50.110Z,1537676150.110 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledTurbulence_NPS = 0.000000 bool
2018-09-23T04:15:50.113Z,1537676150.113 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledWetLabsBB2FL = 0.000000 bool
2018-09-23T04:15:50.115Z,1537676150.115 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledWetLabsSeaOWL_UV_A = 1.000000 bool
2018-09-23T04:15:50.118Z,1537676150.118 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledISUS = 0.000000 bool
2018-09-23T04:15:50.120Z,1537676150.120 [MissionManager](INFO): DefineArg trackPatch:Science.LowPassWindowLength = 20.000000 count
2018-09-23T04:15:50.122Z,1537676150.122 [MissionManager](INFO): DefineArg trackPatch:Science.PeakChlShallowBound = 10.000000 m
2018-09-23T04:15:50.124Z,1537676150.124 [MissionManager](INFO): DefineArg trackPatch:Science.PeakChlDeepBound = 20.000000 m
2018-09-23T04:15:50.161Z,1537676150.161 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChl = 0.000000 ug/l
2018-09-23T04:15:50.163Z,1537676150.163 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlDepth = 0.000000 m
2018-09-23T04:15:50.166Z,1537676150.166 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlTemperature = 0.000000 degC
2018-09-23T04:15:50.168Z,1537676150.168 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlLatitude = nan arcdeg
2018-09-23T04:15:50.186Z,1537676150.186 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlLongitude = nan arcdeg
2018-09-23T04:15:50.188Z,1537676150.188 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3 = 0.000000 umol/l
2018-09-23T04:15:50.191Z,1537676150.191 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3Depth = 0.000000 m
2018-09-23T04:15:50.208Z,1537676150.208 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3Latitude = nan arcdeg
2018-09-23T04:15:50.210Z,1537676150.210 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3Longitude = nan arcdeg
2018-09-23T04:15:50.212Z,1537676150.212 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChl = 0.000000 m
2018-09-23T04:15:50.226Z,1537676150.226 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlDepth = 0.000000 m
2018-09-23T04:15:50.229Z,1537676150.229 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlLatitude = nan arcdeg
2018-09-23T04:15:50.231Z,1537676150.231 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlLongitude = nan arcdeg
2018-09-23T04:15:50.249Z,1537676150.249 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlDistance = nan m
2018-09-23T04:15:50.251Z,1537676150.251 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOil = 0.000000 kg/m3
2018-09-23T04:15:50.253Z,1537676150.253 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOilDepth = 0.000000 m
2018-09-23T04:15:50.256Z,1537676150.256 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOilLatitude = nan arcdeg
2018-09-23T04:15:50.274Z,1537676150.274 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOilLongitude = nan arcdeg
2018-09-23T04:15:50.304Z,1537676150.304 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-23T04:15:50.346Z,1537676150.346 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-23T04:15:50.373Z,1537676150.373 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-23T04:15:50.396Z,1537676150.396 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-23T04:15:50.423Z,1537676150.423 [MissionManager](INFO): RedefineArg trackPatch:Science.PeakDetectChlActive = value:1 bool
2018-09-23T04:15:50.425Z,1537676150.425 [MissionManager](INFO): RedefineArg trackPatch:Science.PatchTracking = value:1 bool
2018-09-23T04:15:50.426Z,1537676150.426 [MissionManager](INFO): RedefineArg trackPatch:Science.LowPassWindowLength = reader:trackPatch.LowPassWindowLen
2018-09-23T04:15:50.427Z,1537676150.427 [MissionManager](INFO): RedefineArg trackPatch:Science.PeakChlShallowBound = reader:trackPatch.PeakChlShallowBnd
2018-09-23T04:15:50.445Z,1537676150.445 [MissionManager](INFO): RedefineArg trackPatch:Science.PeakChlDeepBound = reader:trackPatch.PeakChlDeepBnd
2018-09-23T04:15:50.446Z,1537676150.446 [MissionManager](INFO): RedefineArg trackPatch:Science.OffPeakFractionHorizontal = reader:trackPatch.OffPeakFraction
2018-09-23T04:15:50.447Z,1537676150.447 [trackPatch:K.SetSpeed](DEBUG): Construct.
2018-09-23T04:15:50.450Z,1537676150.450 [trackPatch:L.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-23T04:15:50.456Z,1537676150.456 [trackPatch:M.YoYo](DEBUG): Construct YoYo.
2018-09-23T04:15:50.470Z,1537676150.470 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-23T04:15:50.518Z,1537676150.518 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-23T04:15:50.524Z,1537676150.524 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-23T04:15:50.540Z,1537676150.540 [trackPatch:PatchDetectHorizontal:InLegWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-23T04:15:50.554Z,1537676150.554 [trackPatch:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-23T04:15:50.607Z,1537676150.607 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Trigger="Tethys/Trigger" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Trigger http://okeanids.mbari.org/tethys/Xml/Trigger.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="trackPatch">

    <Description>
        Vehicle runs yo-yos, with patch detect enabled for cholorphyll
        concentration.
    </Description>

<!-- Vehicle safety parameters -->

    <DefineArg Name="MinAltitude"><Description>
        Minimum altitude for the entire mission.
    </Description><Units:meter/><Value>5</Value></DefineArg>

    <DefineArg Name="MaxDepth"><Description>
        Maximum depth for the entire mission.
    </Description><Units:meter/><Value>65</Value></DefineArg>

    <DefineArg Name="MinWaterDepth"><Description>
        Minimum water depth for the entire mission.
    </Description><Units:meter/><Value>10</Value></DefineArg>

    <DefineArg Name="MinOffshore"><Description>
        Minimum offshore distance for the entire mission.
    </Description><Units:meter/><Value>2000</Value></DefineArg>

    <DefineArg Name="NeedCommsTime"><Description>
        Maximum time between surfacings for communications
    </Description><Units:minute/><Value>180</Value></DefineArg>

    <DefineArg Name="MissionTimeout"><Description>
        Timeout for the entire mission
    </Description><Units:hour/><Value>56</Value></DefineArg>

    <DefineArg Name="MassDefault"><Description>
        Static setting for mass during the mission. Defaults to massDefault
        setting in the Config/Control.cfg file.
    </Description><Control:VerticalControl.massDefault/></DefineArg>

    <DefineArg Name="BuoyancyNeutral"><Description>
        Buoyancy bladder position while performing the YoYo behavior. Defaults
        to buoyancyNeutral setting in the Config/Control.cfg file.
    </Description><Control:VerticalControl.buoyancyNeutral/></DefineArg>

<!-- Basic guidance settings -->

    <DefineArg Name="YoYoMinDepth"><Description>
        Minimum depth during yo-yo's.
    </Description><Units:meter/><Value>2.0</Value></DefineArg>

    <DefineArg Name="YoYoMaxDepth"><Description>
        Maximum depth during yo-yo's.
    </Description><Units:meter/><Value>10.0</Value></DefineArg>

    <DefineArg Name="YoYoUpPitch"><Description>
        Pitch when yo-yo's are ascending.
    </Description><Units:degree/><Value>20.0</Value></DefineArg>

    <DefineArg Name="YoYoDownPitch"><Description>
        Pitch when yo-yo's are descending.
    </Description><Units:degree/><Value>-20.0</Value></DefineArg>

    <DefineArg Name="Speed"><Description>
        Vehicle speed.
    </Description><Units:meter_per_second/><Value>1</Value></DefineArg>

    <DefineArg Name="WpMaxDistance"><Description>
        Maximum length of each tracking leg
<!--debug
    </Description><Units:meter/><Value>7500</Value></DefineArg>
-->
    </Description><Units:meter/><Value>1000</Value></DefineArg>

    <DefineArg Name="WpTimeout"><Description>
        Maximum duration of each tracking leg
    </Description><Units:second/><Value>8000</Value></DefineArg>

    <DefineArg Name="WaterFrame"><Description>
        Set WaterFrame true to drive towards waypoints in the water frame of
        reference
    </Description><True/></DefineArg>

    <DefineArg Name="Repeat"><Description>
        Maximum number of tracking legs
    </Description><Units:count/><Value>20</Value></DefineArg>

<!-- Constant settings for each tracking leg -->

    <DefineArg Name="Turn"><Description>
        Amount to turn at each leg
    </Description><Units:degree/><Value>90</Value></DefineArg>

    <DefineArg Name="Reverse"><Description>
        Change in bearing which reverses vehicle direction
    </Description><Units:degree/><Value>180</Value></DefineArg>

    <DefineArg Name="TwoPi"><Description>
        Applied to stop run-up of angles
    </Description><Units:degree/><Value>360</Value></DefineArg>

    <DefineArg Name="LowPassWindowLen"><Description>
        Low-pass window length (based on depth sensor sampling interval 0.4
        second) for low-pass filtering.
    </Description><Units:count/><Value>20</Value></DefineArg>

    <DefineArg Name="PeakChlShallowBnd"><Description>
        Shallow depth bound for detecting chl peak on each descent or ascent
        profile.
<!--debug
    </Description><Units:meter/><Value>NaN</Value></DefineArg>
-->
    </Description><Units:meter/><Value>3</Value></DefineArg>

    <DefineArg Name="PeakChlDeepBnd"><Description>
        Deep depth bound for detecting chl peak on each descent or ascent
        profile.
<!--debug
    </Description><Units:meter/><Value>NaN</Value></DefineArg>
-->
    </Description><Units:meter/><Value>8</Value></DefineArg>

    <DefineArg Name="FilterWidth"><Description>
        Width of boxcar filter used in horizontal patch detection
    </Description><Units:count/><Value>4</Value></DefineArg>

    <DefineArg Name="BeginThreshold"><Description>
        If non-NaN, sets threshold for starting horizontal patch detection
    </Description><Units:microgram_per_liter/><Value>NaN</Value></DefineArg>

    <DefineArg Name="OffPeakFraction"><Description>
        When filtered horizontal value is this fraction of the peak, consider it
        outside the patch.
    </Description><Units:percent/><Value>80</Value></DefineArg>

    <DefineArg Name="PatchMode"><Description>
        If true, use center of "in peak" range as the turn-around point. If
        false use maximum horizontal peak location as the turn-around point.
    </Description><False/></DefineArg>

<!-- Variable Settings for each tracking leg -->

    <DefineArg Name="WpBearing"><Description>
        Bearing being followed in the current leg. Set this to initialize start
        direction of patch tracking.
    </Description><Units:degree/><Value>-90</Value></DefineArg>

    <DefineOutput Name="PatchDetectOn"><Description>
        Mission sets this to true when the patch has been crossed.
    </Description><False/></DefineOutput>

    <DefineOutput Name="WpDone"><Description>
        Mission sets this to true when the cross-patch waypoint has been
        reached.
    </Description><False/></DefineOutput>

    <DefineOutput Name="PatchChl"><Units:microgram_per_liter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlDepth"><Units:meter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlDistance"><Units:meter/><Value>0</Value></DefineOutput>

<!-- The timeout -->

    <Timeout Duration="MissionTimeout"/>

<!-- And now the mission -->

    <Guidance:AltitudeEnvelope>
        <Parallel/>
        <Setting><Guidance:AltitudeEnvelope.minAltitude/><Arg Name="MinAltitude"/></Setting>
    </Guidance:AltitudeEnvelope>

    <Guidance:DepthEnvelope>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="MaxDepth"/></Setting>
    </Guidance:DepthEnvelope>

    <Insert Filename="Insert/Surface.xml" Id="SurfaceCommsSplit">
        <RedefineArg Name="SurfacePitch"><Units:degree/><Value>20</Value></RedefineArg>
        <RedefineArg Name="SurfaceSpeed"><Units:meter_per_second/><Value>1</Value></RedefineArg>
        <RedefineArg Name="UnpackSplitAtSurface"><True/></RedefineArg>
    </Insert>

    <Aggregate Id="SurfaceComms">

        <When>
            <Called/>
        </When>

        <Insert Filename="Insert/Surface.xml">
            <RedefineArg Name="SurfacePitch"><Units:degree/><Value>20</Value></RedefineArg>
            <RedefineArg Name="SurfaceSpeed"><Units:meter_per_second/><Value>1</Value></RedefineArg>
        </Insert>

    </Aggregate>

<!-- GPS Update.  Don't go too long w/o a GPS fix. -->

    <Aggregate Id="NeedComms">

        <When>
            <Universal:platform_pitch_angle/>
            <Gt><Units:degree/><Value>0</Value></Gt>
            <And><Elapsed><Universal:time_fix/></Elapsed><Gt><Arg Name="NeedCommsTime"/></Gt></And>
            <Or><Elapsed><Universal:time_fix/></Elapsed><Gt><Arg Name="NeedCommsTime"/><Add><Units:minute/><Value>10</Value></Add></Gt></Or>
        </When>

        <Syslog Severity="Important">NeedComms Timeout Surfacing</Syslog>

        <Call RefId="SurfaceComms"/>

    </Aggregate>

    <Guidance:OffshoreEnvelope>
        <Parallel/>
        <Setting><Guidance:OffshoreEnvelope.minOffshore/><Arg Name="MinOffshore"/></Setting>
    </Guidance:OffshoreEnvelope>

    <Guidance:WaterDepthEnvelope>
        <Parallel/>
        <Setting><Guidance:WaterDepthEnvelope.minWaterDepth/><Arg Name="MinWaterDepth"/></Setting>
    </Guidance:WaterDepthEnvelope>

    <Guidance:Pitch>
        <Parallel/>
        <Setting><Guidance:Pitch.massPosition/><Arg Name="MassDefault"/></Setting>
    </Guidance:Pitch>

    <Guidance:Buoyancy>
        <Parallel/>
        <Setting><Guidance:Buoyancy.position /><Arg Name="BuoyancyNeutral"/></Setting>
    </Guidance:Buoyancy>

<!-- If we're executing here or below, lets' get science data! -->

    <Insert Filename="Insert/Science.xml">
        <RedefineArg Name="PeakDetectChlActive"><True/></RedefineArg>
        <RedefineArg Name="PatchTracking"><True/></RedefineArg>
        <RedefineArg Name="LowPassWindowLength"><Arg Name="LowPassWindowLen"/></RedefineArg>
        <RedefineArg Name="PeakChlShallowBound"><Arg Name="PeakChlShallowBnd"/></RedefineArg>
        <RedefineArg Name="PeakChlDeepBound"><Arg Name="PeakChlDeepBnd"/></RedefineArg>
        <RedefineArg Name="OffPeakFractionHorizontal"><Arg Name="OffPeakFraction"/></RedefineArg>
    </Insert>

    <Guidance:SetSpeed>
        <Parallel/>
        <Setting><Guidance:SetSpeed.speed/><Arg Name="Speed"/></Setting>
    </Guidance:SetSpeed>

    <Guidance:DepthEnvelope>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.minDepth/><Arg Name="YoYoMinDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="YoYoMaxDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:DepthEnvelope.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:DepthEnvelope>

    <Guidance:YoYo>
        <Parallel/>
        <Setting><Guidance:YoYo.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:YoYo.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:YoYo>

    <Aggregate Id="PatchDetectHorizontal">

        <Sequence Repeat="Repeat"/>

        <Aggregate Id="PatchDetection">

            <When>
                <Arg Name="PatchDetectOn"/>
            </When>

            <Trigger:PeakDetectHorizontal Id="PeakDetectHorizontalTrigger">
                <Sequence/>
<!--debug
                <Break><Arg Name="WpDone"/>
                </Break>
-->
                <Setting><Trigger:PeakDetectHorizontal.patchTracking/><Units:bool/><Value>1</Value></Setting>
                <Setting><Trigger:PeakDetectHorizontal.detectFrom/><Arg Name="Science:PeakChl"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.depthFrom/><Arg Name="Science:PeakChlDepth"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.latitudeFrom/><Arg Name="Science:PeakChlLatitude"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.longitudeFrom/><Arg Name="Science:PeakChlLongitude"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.beginThreshold/><Arg Name="BeginThreshold"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.offPeakFraction/><Arg Name="OffPeakFraction"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.filterWidth/><Arg Name="FilterWidth"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.centerPeak/><Arg Name="PatchMode"/></Setting>
                <OutputArg Name="PatchChl"><Trigger:PeakDetectHorizontal.peakDetect/></OutputArg>
                <OutputArg Name="PatchChlDepth"><Trigger:PeakDetectHorizontal.peakDepth/></OutputArg>
                <OutputArg Name="PatchChlLatitude"><Trigger:PeakDetectHorizontal.peakLatitude/></OutputArg>
                <OutputArg Name="PatchChlLongitude"><Trigger:PeakDetectHorizontal.peakLongitude/></OutputArg>
                <OutputArg Name="PatchChlDistance"><Trigger:PeakDetectHorizontal.peakDistance/></OutputArg>
            </Trigger:PeakDetectHorizontal>

            <Syslog Severity="Important">Fell below OffPeakFraction. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Arg Name="PatchChlDepth"/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog>

            <SendData Service="Express"><Arg Name="PatchChl"/><Arg Name="PatchChlDepth"/><Arg Name="PatchChlLatitude"/><Arg Name="PatchChlLongitude"/>
            </SendData>

            <Assign Id="AssignPatchDetectOff"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

        </Aggregate>

        <Assign Id="AssignPatchDetectOn"><Sequence/><Arg Name="PatchDetectOn"/><True/></Assign>

        <Syslog Severity="Important">Next: bearing for CrossLeg: <Arg Name="WpBearing"/><Units:degree/>. WpMaxDistance = <Arg Name="WpMaxDistance"/><Units:meter/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>.</Syslog>

        <Aggregate Id="CrossLeg">

            <Description>
                This is a long leg across the width of the patch. Also the first
                leg in a mission run. Two waypoints run in parallel: a short run
                to the surfacing point, and a longer run to the edge of the
                patch.
            </Description>

            <Sequence/>

            <Break><Arg Name="WpDone"/>
                <Or><Arg Name="PatchDetectOn"/><Eq><False/></Eq></Or>
            </Break>

            <Guidance:Waypoint Id="CrossSurfaceWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="PatchChlDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Call RefId="SurfaceComms"/>

            <Guidance:Waypoint Id="CrossPeakWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="WpMaxDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

<!--debug-->
            <Syslog Severity="Important">CrossPeakWp done. Lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Arg Name="PatchChlDepth"/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog> 

            <Assign Id="AssignPatchDetectOffInCrossLeg"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

            <Assign Id="AssignWpDoneInCrossLeg"><Sequence/><Arg Name="WpDone"/><True/></Assign>

        </Aggregate>

        <Assign Id="AssignWpBearingForInLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Add><Arg Name="Reverse"/></Add><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

        <Syslog Severity="Important">Next: bearing for InLeg: <Arg Name="WpBearing"/><Units:degree/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Arg Name="PatchChlDepth"/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog> 

        <Guidance:Waypoint Id="InLegWp">
            <Description>
                Simply drive back towards the patch center
            </Description>
            <Sequence/>
            <Timeout Duration="WpTimeout"/>
            <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="PatchChlDistance"/></Setting>
            <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
            <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
        </Guidance:Waypoint>

        <Assign Id="AssignWpBearingForOutLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Sub><Arg Name="Turn"/></Sub><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

        <Syslog Severity="Important">Next: bearing for OutLeg: <Arg Name="WpBearing"/><Units:degree/>. WpMaxDistance = <Arg Name="WpMaxDistance"/><Units:meter/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Arg Name="PatchChlDepth"/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog>

        <Call RefId="SurfaceCommsSplit"/>

        <Assign Id="AssignPatchDetectOnForOutLeg"><Sequence/><Arg Name="PatchDetectOn"/><True/></Assign>

        <Aggregate Id="OutLeg">

            <Description>
                Drive outward until edge of patch is detected.
            </Description>

            <Sequence/>

            <Break><Arg Name="WpDone"/>
                <Or><Arg Name="PatchDetectOn"/><Eq><False/></Eq></Or>
            </Break>

            <Guidance:Waypoint Id="OutLegWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="WpMaxDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Assign Id="AssignPatchDetectOffInOutLeg"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

            <Assign Id="AssignWpDoneInOutLeg"><Sequence/><Arg Name="WpDone"/><True/></Assign>

        </Aggregate>

        <Assign Id="AssignWpBearingForCrossLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Add><Arg Name="Reverse"/></Add><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

    </Aggregate>

</Mission>


2018-09-23T04:15:50.607Z,1537676150.607 [CommandLine](IMPORTANT): Loaded ./Missions/Science/trackPatch.xml
2018-09-23T04:16:02.158Z,1537676162.158 [CommandLine](IMPORTANT): got command set trackPatch.MissionTimeout 30.000000 minute
2018-09-23T04:16:02.159Z,1537676162.159 [CommandLine](IMPORTANT): got command set trackPatch.YoYoMinDepth 2.000000 meter
2018-09-23T04:16:02.160Z,1537676162.160 [CommandLine](IMPORTANT): got command set trackPatch.YoYoMaxDepth 10.000000 meter
2018-09-23T04:16:02.161Z,1537676162.161 [CommandLine](IMPORTANT): got command set trackPatch.PeakChlShallowBnd 3.000000 meter
2018-09-23T04:16:02.183Z,1537676162.183 [CommandLine](IMPORTANT): got command set trackPatch.PeakChlDeepBnd 8.000000 meter
2018-09-23T04:16:02.184Z,1537676162.184 [CommandLine](IMPORTANT): got command run
2018-09-23T04:16:02.186Z,1537676162.186 [CommandLine](IMPORTANT): Running 
2018-09-23T04:16:02.210Z,1537676162.210 [NAL9602](INFO): SBD MO Status=0, MOMSN=1203, MT Status=0, MTMSN=0
2018-09-23T04:16:02.211Z,1537676162.211 [NAL9602](INFO): No messages in MT queue
2018-09-23T04:16:02.241Z,1537676162.241 [RDI_Pathfinder](ERROR): No DVL communication! Re-initializing
2018-09-23T04:16:02.241Z,1537676162.241 [RDI_Pathfinder] Communications Fault, FailCount= 1
2018-09-23T04:16:02.241Z,1537676162.241 [RDI_Pathfinder](ERROR): Communications Fault
2018-09-23T04:16:02.285Z,1537676162.285 [Default] Stopped
2018-09-23T04:16:02.285Z,1537676162.285 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-23T04:16:02.285Z,1537676162.285 [Default:B.GoToSurface] Stopped
2018-09-23T04:16:02.285Z,1537676162.285 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-23T04:16:02.285Z,1537676162.285 [Default:CheckIn] Stopped
2018-09-23T04:16:02.285Z,1537676162.285 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-23T04:16:02.286Z,1537676162.286 [Default:CheckIn:Read_GPS] Stopped
2018-09-23T04:16:02.286Z,1537676162.286 [MissionManager](IMPORTANT): Started mission trackPatch
2018-09-23T04:16:02.286Z,1537676162.286 [trackPatch] Running Loop=1
2018-09-23T04:16:02.286Z,1537676162.286 [trackPatch](DEBUG): Aggregate::initialize trackPatch
2018-09-23T04:16:02.286Z,1537676162.286 [trackPatch:A.AltitudeEnvelope] Running Loop=1
2018-09-23T04:16:02.286Z,1537676162.286 [trackPatch:A.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-23T04:16:02.287Z,1537676162.287 [trackPatch:B.DepthEnvelope] Running Loop=1
2018-09-23T04:16:02.287Z,1537676162.287 [trackPatch:B.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-23T04:16:02.287Z,1537676162.287 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-23T04:16:02.287Z,1537676162.287 [trackPatch:F.OffshoreEnvelope](DEBUG): Initialize OffshoreEnvelopeComponent.
2018-09-23T04:16:02.287Z,1537676162.287 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-23T04:16:02.287Z,1537676162.287 [trackPatch:G.WaterDepthEnvelope](DEBUG): Initialize WaterDepthEnvelopeComponent.
2018-09-23T04:16:02.287Z,1537676162.287 [trackPatch:H.Pitch] Running Loop=1
2018-09-23T04:16:02.287Z,1537676162.287 [trackPatch:H.Pitch](DEBUG): Initialize.
2018-09-23T04:16:02.288Z,1537676162.288 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-23T04:16:02.288Z,1537676162.288 [trackPatch:I.Buoyancy](DEBUG): Initialize Buoyancy Component.
2018-09-23T04:16:02.288Z,1537676162.288 [trackPatch:Science] Running Loop=1
2018-09-23T04:16:02.288Z,1537676162.288 [trackPatch:Science](DEBUG): Aggregate::initialize trackPatch:Science
2018-09-23T04:16:02.288Z,1537676162.288 [trackPatch:Science:A] Running Loop=1
2018-09-23T04:16:02.288Z,1537676162.288 [trackPatch:Science:B] Running Loop=1
2018-09-23T04:16:02.288Z,1537676162.288 [trackPatch:Science:C] Running Loop=1
2018-09-23T04:16:02.288Z,1537676162.288 [trackPatch:Science:D] Running Loop=1
2018-09-23T04:16:02.288Z,1537676162.288 [trackPatch:Science:E] Running Loop=1
2018-09-23T04:16:02.288Z,1537676162.288 [trackPatch:Science:F] Running Loop=1
2018-09-23T04:16:02.288Z,1537676162.288 [trackPatch:Science:G] Running Loop=1
2018-09-23T04:16:02.288Z,1537676162.288 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-23T04:16:02.289Z,1537676162.289 [trackPatch:Science:PeakDetectChl] Running Loop=1
2018-09-23T04:16:02.289Z,1537676162.289 [trackPatch:Science:PeakDetectChl](DEBUG): Aggregate::initialize trackPatch:Science:PeakDetectChl
2018-09-23T04:16:02.289Z,1537676162.289 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2018-09-23T04:16:02.289Z,1537676162.289 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-23T04:16:02.290Z,1537676162.290 [trackPatch:Science:HighestChlPeakReport] Running Loop=1
2018-09-23T04:16:02.290Z,1537676162.290 [trackPatch:Science:HighestChlPeakReport](DEBUG): Aggregate::initialize trackPatch:Science:HighestChlPeakReport
2018-09-23T04:16:02.291Z,1537676162.291 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2018-09-23T04:16:02.291Z,1537676162.291 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2018-09-23T04:16:02.291Z,1537676162.291 [trackPatch:Science:PeakDetectNO3] Running Loop=1
2018-09-23T04:16:02.291Z,1537676162.291 [trackPatch:Science:PeakDetectNO3](DEBUG): Aggregate::initialize trackPatch:Science:PeakDetectNO3
2018-09-23T04:16:02.291Z,1537676162.291 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2018-09-23T04:16:02.292Z,1537676162.292 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-23T04:16:02.292Z,1537676162.292 [trackPatch:Science:PeakDetectOil] Running Loop=1
2018-09-23T04:16:02.293Z,1537676162.293 [trackPatch:Science:PeakDetectOil](DEBUG): Aggregate::initialize trackPatch:Science:PeakDetectOil
2018-09-23T04:16:02.293Z,1537676162.293 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2018-09-23T04:16:02.293Z,1537676162.293 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-23T04:16:02.294Z,1537676162.294 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-23T04:16:02.294Z,1537676162.294 [trackPatch:K.SetSpeed](DEBUG): Initialize.
2018-09-23T04:16:02.294Z,1537676162.294 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-23T04:16:02.294Z,1537676162.294 [trackPatch:L.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-23T04:16:02.294Z,1537676162.294 [trackPatch:M.YoYo] Running Loop=1
2018-09-23T04:16:02.295Z,1537676162.295 [trackPatch:M.YoYo](DEBUG): Initialize YoYoComponent.
2018-09-23T04:16:02.295Z,1537676162.295 [trackPatch:SurfaceCommsSplit] Running Loop=1
2018-09-23T04:16:02.295Z,1537676162.295 [trackPatch:SurfaceCommsSplit](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit
2018-09-23T04:16:02.295Z,1537676162.295 [trackPatch:SurfaceCommsSplit:A.GoToSurface] Running Loop=1
2018-09-23T04:16:02.295Z,1537676162.295 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T04:16:02.296Z,1537676162.296 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-23T04:16:02.296Z,1537676162.296 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-23T04:16:02.296Z,1537676162.296 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-23T04:16:02.309Z,1537676162.309 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T04:16:02.309Z,1537676162.309 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T04:16:02.310Z,1537676162.310 [trackPatch:M.YoYo] Running Loop=1
2018-09-23T04:16:02.312Z,1537676162.312 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-23T04:16:02.313Z,1537676162.313 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-23T04:16:02.314Z,1537676162.314 [trackPatch:Science] Running Loop=1
2018-09-23T04:16:02.333Z,1537676162.333 [trackPatch:Science:PeakDetectOil] Stopped
2018-09-23T04:16:02.333Z,1537676162.333 [trackPatch:Science:PeakDetectOil](DEBUG): Aggregate::uninitialize trackPatch:Science:PeakDetectOil
2018-09-23T04:16:02.333Z,1537676162.333 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2018-09-23T04:16:02.333Z,1537676162.333 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-23T04:16:02.334Z,1537676162.334 [trackPatch:Science:PeakDetectNO3] Stopped
2018-09-23T04:16:02.334Z,1537676162.334 [trackPatch:Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize trackPatch:Science:PeakDetectNO3
2018-09-23T04:16:02.334Z,1537676162.334 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2018-09-23T04:16:02.334Z,1537676162.334 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-23T04:16:02.334Z,1537676162.334 [trackPatch:Science:HighestChlPeakReport] Stopped
2018-09-23T04:16:02.334Z,1537676162.334 [trackPatch:Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize trackPatch:Science:HighestChlPeakReport
2018-09-23T04:16:02.334Z,1537676162.334 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2018-09-23T04:16:02.334Z,1537676162.334 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-23T04:16:02.334Z,1537676162.334 [trackPatch:Science:PeakDetectChl] Running Loop=1
2018-09-23T04:16:02.335Z,1537676162.335 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-23T04:16:02.336Z,1537676162.336 [trackPatch:Science:Read_Oil](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-23T04:16:02.337Z,1537676162.337 [trackPatch:Science:G] Running Loop=1
2018-09-23T04:16:02.337Z,1537676162.337 [trackPatch:Science:G](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-23T04:16:02.338Z,1537676162.338 [trackPatch:Science:F] Stopped
2018-09-23T04:16:02.338Z,1537676162.338 [trackPatch:Science:E] Stopped
2018-09-23T04:16:02.338Z,1537676162.338 [trackPatch:Science:D] Stopped
2018-09-23T04:16:02.338Z,1537676162.338 [trackPatch:Science:C] Stopped
2018-09-23T04:16:02.338Z,1537676162.338 [trackPatch:Science:B] Stopped
2018-09-23T04:16:02.339Z,1537676162.339 [trackPatch:Science:A] Stopped
2018-09-23T04:16:02.339Z,1537676162.339 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-23T04:16:02.340Z,1537676162.340 [trackPatch:H.Pitch] Running Loop=1
2018-09-23T04:16:02.341Z,1537676162.341 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-23T04:16:02.342Z,1537676162.342 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-23T04:16:02.364Z,1537676162.364 [trackPatch:SurfaceCommsSplit:B] Running Loop=1
2018-09-23T04:16:02.364Z,1537676162.364 [trackPatch:SurfaceCommsSplit:B](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit:B
2018-09-23T04:16:02.364Z,1537676162.364 [trackPatch:SurfaceCommsSplit:B:A] Running Loop=1
2018-09-23T04:16:02.364Z,1537676162.364 [trackPatch:B.DepthEnvelope] Running Loop=1
2018-09-23T04:16:02.365Z,1537676162.365 [trackPatch:A.AltitudeEnvelope] Running Loop=1
2018-09-23T04:16:02.386Z,1537676162.386 [CBIT](ERROR): Communications Fault in component: RDI_Pathfinder
2018-09-23T04:16:02.533Z,1537676162.533 [RDI_Pathfinder](INFO): Powering down
2018-09-23T04:16:02.568Z,1537676162.568 [trackPatch:SurfaceCommsSplit:B:A](INFO): ##UnpackSplit##
2018-09-23T04:16:02.568Z,1537676162.568 [trackPatch:SurfaceCommsSplit:B:A] Stopped
2018-09-23T04:16:02.573Z,1537676162.573 [trackPatch:SurfaceCommsSplit:B](INFO): Completed trackPatch:SurfaceCommsSplit:B
2018-09-23T04:16:02.573Z,1537676162.573 [trackPatch:SurfaceCommsSplit:B] Stopped
2018-09-23T04:16:02.573Z,1537676162.573 [trackPatch:SurfaceCommsSplit:B](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit:B
2018-09-23T04:16:02.573Z,1537676162.573 [trackPatch:SurfaceCommsSplit:C] Running Loop=1
2018-09-23T04:16:02.573Z,1537676162.573 [trackPatch:SurfaceCommsSplit:C](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit:C
2018-09-23T04:16:02.574Z,1537676162.574 [trackPatch:SurfaceCommsSplit:C:A] Running Loop=1
2018-09-23T04:16:02.665Z,1537676162.665 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-23T04:16:02.665Z,1537676162.665 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-23T04:16:02.855Z,1537676162.855 [trackPatch:M.YoYo] Preempted
2018-09-23T04:16:02.855Z,1537676162.855 [trackPatch:L.DepthEnvelope] Preempted
2018-09-23T04:16:02.855Z,1537676162.855 [trackPatch:K.SetSpeed] Preempted
2018-09-23T04:16:02.855Z,1537676162.855 [trackPatch:Science] Preempted
2018-09-23T04:16:02.855Z,1537676162.855 [trackPatch:Science:G] Preempted
2018-09-23T04:16:02.855Z,1537676162.855 [trackPatch:Science:Read_Oil] Preempted
2018-09-23T04:16:02.855Z,1537676162.855 [trackPatch:Science:PeakDetectChl] Preempted
2018-09-23T04:16:02.855Z,1537676162.855 [trackPatch:I.Buoyancy] Preempted
2018-09-23T04:16:02.855Z,1537676162.855 [trackPatch:H.Pitch] Preempted
2018-09-23T04:16:02.855Z,1537676162.855 [trackPatch:G.WaterDepthEnvelope] Preempted
2018-09-23T04:16:02.855Z,1537676162.855 [trackPatch:F.OffshoreEnvelope] Preempted
2018-09-23T04:16:02.861Z,1537676162.861 [trackPatch:SurfaceCommsSplit:C:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-23T04:16:03.282Z,1537676163.282 [CBIT](INFO): Clearing failed state for component RDI_Pathfinder
2018-09-23T04:16:03.282Z,1537676163.282 [RDI_Pathfinder] No Fault, FailCount= 1
2018-09-23T04:16:04.843Z,1537676164.843 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-23T04:16:16.836Z,1537676176.836 [RDI_Pathfinder](ERROR): Failed to parse:Pathfinder
2018-09-23T04:18:42.427Z,1537676322.427 [NAL9602](INFO): GPS fix at 20180923T041831: (36.839049, -121.899752)
2018-09-23T04:18:42.484Z,1537676322.484 [trackPatch:SurfaceCommsSplit:C:A] Stopped
2018-09-23T04:18:42.485Z,1537676322.485 [trackPatch:SurfaceCommsSplit:C:B] Running Loop=1
2018-09-23T04:18:42.898Z,1537676322.898 [trackPatch:SurfaceCommsSplit:C:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-23T04:18:50.180Z,1537676330.180 [DataOverHttps](INFO): Sending 81 bytes from file Logs/20180922T190757/Courier0129.lzma
2018-09-23T04:18:51.378Z,1537676331.378 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0129.lzma.bak
2018-09-23T04:18:51.378Z,1537676331.378 [DataOverHttps](INFO): SBD MOMSN=8564723
2018-09-23T04:19:06.482Z,1537676346.482 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180922T190757/Courier0132.lzma
2018-09-23T04:19:09.278Z,1537676349.278 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0132.lzma.bak
2018-09-23T04:19:09.278Z,1537676349.278 [DataOverHttps](INFO): SBD MOMSN=8564726
2018-09-23T04:19:17.678Z,1537676357.678 [NAL9602](INFO): Powering down
2018-09-23T04:19:18.929Z,1537676358.929 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for altitude
2018-09-23T04:19:18.930Z,1537676358.930 [RDI_Pathfinder](ERROR): Failed to parse:
:BD,        +0.00 +0.00,        +0.00,   0.00,182.00
2018-09-23T04:19:36.852Z,1537676376.852 [DataOverHttps](INFO): Sending 363 bytes from file Logs/20180922T190757/Express0130.lzma
2018-09-23T04:19:42.849Z,1537676382.849 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0130.lzma.bak
2018-09-23T04:19:42.850Z,1537676382.850 [DataOverHttps](INFO): SBD MOMSN=8564728
2018-09-23T04:20:43.728Z,1537676443.728 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T04:21:14.528Z,1537676474.528 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T04:21:45.328Z,1537676505.328 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T04:22:16.138Z,1537676536.138 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T04:22:42.935Z,1537676562.935 [DataOverHttps](INFO): setting unavailable, lastComms_.elapsed()=180.086655
2018-09-23T04:22:42.938Z,1537676562.938 [NAL9602](INFO): Powering up
2018-09-23T04:22:54.134Z,1537676574.134 [NAL9602](INFO): NAL9602 initialized
2018-09-23T04:23:13.473Z,1537676593.473 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T04:23:17.880Z,1537676597.880 [NAL9602](INFO): SBD MO Status=2, MOMSN=1204, MT Status=2, MTMSN=0
2018-09-23T04:23:17.880Z,1537676597.880 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-23T04:23:17.925Z,1537676597.925 [RDI_Pathfinder](ERROR): Failed to parse:
68,-32768,-32768,-3276,-32768,-32768,-32768,V
2018-09-23T04:23:47.729Z,1537676627.729 [NAL9602](INFO): SBD MO Status=1, MOMSN=1204, MT Status=0, MTMSN=0
2018-09-23T04:23:47.777Z,1537676627.777 [NAL9602](INFO): Sent 25 bytes from file Logs/20180922T190757/Express0133.lzma
2018-09-23T04:23:47.777Z,1537676627.777 [NAL9602](INFO): Packets left to send: 0
2018-09-23T04:23:47.779Z,1537676627.779 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0133.lzma.parts/0000.sbd
2018-09-23T04:23:47.779Z,1537676627.779 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Express0133.lzma
2018-09-23T04:23:48.729Z,1537676628.729 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003072
2018-09-23T04:23:49.241Z,1537676629.241 [trackPatch:SurfaceCommsSplit:C:B] Stopped
2018-09-23T04:23:49.242Z,1537676629.242 [trackPatch:SurfaceCommsSplit:C:C] Running Loop=1
2018-09-23T04:23:49.603Z,1537676629.603 [trackPatch:SurfaceCommsSplit:C:C](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-23T04:23:56.444Z,1537676636.444 [NAL9602](INFO): SBD MO Status=0, MOMSN=1205, MT Status=0, MTMSN=0
2018-09-23T04:25:05.395Z,1537676705.395 [NAL9602](INFO): GPS fix at 20180923T042454: (36.839350, -121.900049)
2018-09-23T04:25:05.448Z,1537676705.448 [trackPatch:SurfaceCommsSplit:C:C] Stopped
2018-09-23T04:25:05.448Z,1537676705.448 [trackPatch:SurfaceCommsSplit:C](INFO): Completed trackPatch:SurfaceCommsSplit:C
2018-09-23T04:25:05.448Z,1537676705.448 [trackPatch:SurfaceCommsSplit:C] Stopped
2018-09-23T04:25:05.448Z,1537676705.448 [trackPatch:SurfaceCommsSplit:C](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit:C
2018-09-23T04:25:05.449Z,1537676705.449 [trackPatch:SurfaceCommsSplit](INFO): Completed trackPatch:SurfaceCommsSplit
2018-09-23T04:25:05.450Z,1537676705.450 [trackPatch:SurfaceCommsSplit] Stopped
2018-09-23T04:25:05.450Z,1537676705.450 [trackPatch:SurfaceCommsSplit](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit
2018-09-23T04:25:05.450Z,1537676705.450 [trackPatch:SurfaceCommsSplit:A.GoToSurface] Stopped
2018-09-23T04:25:05.450Z,1537676705.450 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-23T04:25:05.450Z,1537676705.450 [trackPatch:PatchDetectHorizontal] Running Loop=1
2018-09-23T04:25:05.450Z,1537676705.450 [trackPatch:PatchDetectHorizontal](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal
2018-09-23T04:25:05.450Z,1537676705.450 [trackPatch:PatchDetectHorizontal:AssignPatchDetectOn] Running Loop=1
2018-09-23T04:25:05.908Z,1537676705.908 [trackPatch:PatchDetectHorizontal:AssignPatchDetectOn] Stopped
2018-09-23T04:25:05.908Z,1537676705.908 [trackPatch:PatchDetectHorizontal:C] Running Loop=1
2018-09-23T04:25:05.908Z,1537676705.908 [trackPatch:M.YoYo] Running Loop=1
2018-09-23T04:25:05.917Z,1537676705.917 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-23T04:25:05.918Z,1537676705.918 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-23T04:25:05.918Z,1537676705.918 [trackPatch:Science] Running Loop=1
2018-09-23T04:25:05.920Z,1537676705.920 [trackPatch:Science:PeakDetectChl] Running Loop=1
2018-09-23T04:25:05.920Z,1537676705.920 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-23T04:25:05.925Z,1537676705.925 [trackPatch:Science:G] Running Loop=1
2018-09-23T04:25:05.926Z,1537676705.926 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-23T04:25:05.926Z,1537676705.926 [trackPatch:H.Pitch] Running Loop=1
2018-09-23T04:25:05.926Z,1537676705.926 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-23T04:25:05.927Z,1537676705.927 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-23T04:25:06.172Z,1537676706.172 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-23T04:25:06.173Z,1537676706.173 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-23T04:25:06.281Z,1537676706.281 [trackPatch:PatchDetectHorizontal:C](IMPORTANT): Next: bearing for CrossLeg: -90.000000 arcdeg . WpMaxDistance = 1000.000000 m . Current lat, lon = 36.839350 arcdeg , -121.900050 arcdeg .
2018-09-23T04:25:06.282Z,1537676706.282 [trackPatch:PatchDetectHorizontal:C] Stopped
2018-09-23T04:25:06.282Z,1537676706.282 [trackPatch:PatchDetectHorizontal:CrossLeg] Running Loop=1
2018-09-23T04:25:06.282Z,1537676706.282 [trackPatch:PatchDetectHorizontal:CrossLeg](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal:CrossLeg
2018-09-23T04:25:06.282Z,1537676706.282 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint] Running Loop=1
2018-09-23T04:25:06.282Z,1537676706.282 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-23T04:25:06.283Z,1537676706.283 [trackPatch:PatchDetectHorizontal:PatchDetection] Running Loop=1
2018-09-23T04:25:06.283Z,1537676706.283 [trackPatch:PatchDetectHorizontal:PatchDetection](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal:PatchDetection
2018-09-23T04:25:06.283Z,1537676706.283 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal] Running Loop=1
2018-09-23T04:25:06.284Z,1537676706.284 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](INFO): Initialize.
2018-09-23T04:25:06.670Z,1537676706.670 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint] Stopped
2018-09-23T04:25:06.670Z,1537676706.670 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-23T04:25:06.670Z,1537676706.670 [trackPatch:PatchDetectHorizontal:CrossLeg:B] Running Loop=1
2018-09-23T04:25:06.670Z,1537676706.670 [trackPatch:PatchDetectHorizontal:CrossLeg:B](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal:CrossLeg:B
2018-09-23T04:25:07.095Z,1537676707.095 [trackPatch:SurfaceComms] Running Loop=1
2018-09-23T04:25:07.095Z,1537676707.095 [trackPatch:SurfaceComms](DEBUG): Aggregate::initialize trackPatch:SurfaceComms
2018-09-23T04:25:07.096Z,1537676707.096 [trackPatch:SurfaceComms:SurfaceComms] Running Loop=1
2018-09-23T04:25:07.096Z,1537676707.096 [trackPatch:SurfaceComms:SurfaceComms](DEBUG): Aggregate::initialize trackPatch:SurfaceComms:SurfaceComms
2018-09-23T04:25:07.096Z,1537676707.096 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface] Running Loop=1
2018-09-23T04:25:07.096Z,1537676707.096 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T04:25:07.096Z,1537676707.096 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-23T04:25:07.101Z,1537676707.101 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-23T04:25:07.101Z,1537676707.101 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-23T04:25:07.102Z,1537676707.102 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T04:25:07.102Z,1537676707.102 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T04:25:07.110Z,1537676707.110 [trackPatch:SurfaceComms:SurfaceComms:B] Running Loop=1
2018-09-23T04:25:07.110Z,1537676707.110 [trackPatch:SurfaceComms:SurfaceComms:B](DEBUG): Aggregate::initialize trackPatch:SurfaceComms:SurfaceComms:B
2018-09-23T04:25:07.111Z,1537676707.111 [trackPatch:SurfaceComms:SurfaceComms:B:A] Running Loop=1
2018-09-23T04:25:07.145Z,1537676707.145 [BuoyancyServo](INFO): Failure count cleared after critical for BuoyancyServo
2018-09-23T04:25:07.456Z,1537676707.456 [trackPatch:SurfaceComms:SurfaceComms:B] Stopped
2018-09-23T04:25:07.456Z,1537676707.456 [trackPatch:SurfaceComms:SurfaceComms:B](DEBUG): Aggregate::uninitialize trackPatch:SurfaceComms:SurfaceComms:B
2018-09-23T04:25:07.456Z,1537676707.456 [trackPatch:SurfaceComms:SurfaceComms:B:A] Stopped
2018-09-23T04:25:07.456Z,1537676707.456 [trackPatch:SurfaceComms:SurfaceComms:C] Running Loop=1
2018-09-23T04:25:07.456Z,1537676707.456 [trackPatch:SurfaceComms:SurfaceComms:C](DEBUG): Aggregate::initialize trackPatch:SurfaceComms:SurfaceComms:C
2018-09-23T04:25:07.461Z,1537676707.461 [trackPatch:SurfaceComms:SurfaceComms:C:A] Running Loop=1
2018-09-23T04:25:07.888Z,1537676707.888 [trackPatch:M.YoYo] Preempted
2018-09-23T04:25:07.888Z,1537676707.888 [trackPatch:L.DepthEnvelope] Preempted
2018-09-23T04:25:07.888Z,1537676707.888 [trackPatch:K.SetSpeed] Preempted
2018-09-23T04:25:07.888Z,1537676707.888 [trackPatch:Science] Preempted
2018-09-23T04:25:07.888Z,1537676707.888 [trackPatch:Science:G] Preempted
2018-09-23T04:25:07.889Z,1537676707.889 [trackPatch:Science:Read_Oil] Preempted
2018-09-23T04:25:07.893Z,1537676707.893 [trackPatch:Science:PeakDetectChl] Preempted
2018-09-23T04:25:07.893Z,1537676707.893 [trackPatch:I.Buoyancy] Preempted
2018-09-23T04:25:07.893Z,1537676707.893 [trackPatch:H.Pitch] Preempted
2018-09-23T04:25:07.893Z,1537676707.893 [trackPatch:G.WaterDepthEnvelope] Preempted
2018-09-23T04:25:07.893Z,1537676707.893 [trackPatch:F.OffshoreEnvelope] Preempted
2018-09-23T04:25:07.894Z,1537676707.894 [trackPatch:SurfaceComms:SurfaceComms:C:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-23T04:25:08.373Z,1537676708.373 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-23T04:25:09.411Z,1537676709.411 [NAL9602](INFO): GPS fix at 20180923T042458: (36.839354, -121.900045)
2018-09-23T04:25:09.464Z,1537676709.464 [trackPatch:SurfaceComms:SurfaceComms:C:A] Stopped
2018-09-23T04:25:09.464Z,1537676709.464 [trackPatch:SurfaceComms:SurfaceComms:C:B] Running Loop=1
2018-09-23T04:25:09.878Z,1537676709.878 [trackPatch:SurfaceComms:SurfaceComms:C:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-23T04:25:14.410Z,1537676714.410 [DataOverHttps](INFO): Sending 64 bytes from file Logs/20180922T190757/Courier0135.lzma
2018-09-23T04:25:15.201Z,1537676715.201 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0135.lzma.bak
2018-09-23T04:25:15.202Z,1537676715.202 [DataOverHttps](INFO): SBD MOMSN=8564784
2018-09-23T04:25:27.641Z,1537676727.641 [DataOverHttps](INFO): Sending 204 bytes from file Logs/20180922T190757/Express0136.lzma
2018-09-23T04:25:28.399Z,1537676728.399 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0136.lzma.bak
2018-09-23T04:25:28.399Z,1537676728.399 [DataOverHttps](INFO): SBD MOMSN=8564787
2018-09-23T04:25:28.904Z,1537676728.904 [RDI_Pathfinder](ERROR): Failed to parse:
:BD,        +0.00,        +0.00,        +0.00,   0.00,550.99
2018-09-23T04:25:28.918Z,1537676728.918 [trackPatch:SurfaceComms:SurfaceComms:C:B] Stopped
2018-09-23T04:25:28.918Z,1537676728.918 [trackPatch:SurfaceComms:SurfaceComms:C:C] Running Loop=1
2018-09-23T04:25:29.238Z,1537676729.238 [trackPatch:SurfaceComms:SurfaceComms:C:C](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-23T04:25:33.443Z,1537676733.443 [NAL9602](INFO): GPS fix at 20180923T042522: (36.839362, -121.900067)
2018-09-23T04:25:33.503Z,1537676733.503 [trackPatch:SurfaceComms:SurfaceComms:C:C] Stopped
2018-09-23T04:25:33.503Z,1537676733.503 [trackPatch:SurfaceComms:SurfaceComms:C](INFO): Completed trackPatch:SurfaceComms:SurfaceComms:C
2018-09-23T04:25:33.504Z,1537676733.504 [trackPatch:SurfaceComms:SurfaceComms:C] Stopped
2018-09-23T04:25:33.504Z,1537676733.504 [trackPatch:SurfaceComms:SurfaceComms:C](DEBUG): Aggregate::uninitialize trackPatch:SurfaceComms:SurfaceComms:C
2018-09-23T04:25:33.509Z,1537676733.509 [trackPatch:SurfaceComms:SurfaceComms](INFO): Completed trackPatch:SurfaceComms:SurfaceComms
2018-09-23T04:25:33.509Z,1537676733.509 [trackPatch:SurfaceComms:SurfaceComms] Stopped
2018-09-23T04:25:33.509Z,1537676733.509 [trackPatch:SurfaceComms:SurfaceComms](DEBUG): Aggregate::uninitialize trackPatch:SurfaceComms:SurfaceComms
2018-09-23T04:25:33.509Z,1537676733.509 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface] Stopped
2018-09-23T04:25:33.509Z,1537676733.509 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-23T04:25:33.509Z,1537676733.509 [trackPatch:SurfaceComms](INFO): Completed trackPatch:SurfaceComms
2018-09-23T04:25:33.510Z,1537676733.510 [trackPatch:SurfaceComms] Stopped
2018-09-23T04:25:33.510Z,1537676733.510 [trackPatch:SurfaceComms](DEBUG): Aggregate::uninitialize trackPatch:SurfaceComms
2018-09-23T04:25:33.911Z,1537676733.911 [trackPatch:PatchDetectHorizontal:CrossLeg:B](INFO): Completed trackPatch:PatchDetectHorizontal:CrossLeg:B
2018-09-23T04:25:33.911Z,1537676733.911 [trackPatch:PatchDetectHorizontal:CrossLeg:B] Stopped
2018-09-23T04:25:33.911Z,1537676733.911 [trackPatch:PatchDetectHorizontal:CrossLeg:B](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal:CrossLeg:B
2018-09-23T04:25:33.912Z,1537676733.912 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint] Running Loop=1
2018-09-23T04:25:33.912Z,1537676733.912 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-23T04:25:33.914Z,1537676733.914 [trackPatch:M.YoYo] Running Loop=1
2018-09-23T04:25:33.915Z,1537676733.915 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-23T04:25:33.916Z,1537676733.916 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-23T04:25:33.916Z,1537676733.916 [trackPatch:Science] Running Loop=1
2018-09-23T04:25:33.926Z,1537676733.926 [trackPatch:Science:PeakDetectChl] Running Loop=1
2018-09-23T04:25:33.927Z,1537676733.927 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-23T04:25:33.927Z,1537676733.927 [trackPatch:Science:G] Running Loop=1
2018-09-23T04:25:33.927Z,1537676733.927 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-23T04:25:33.928Z,1537676733.928 [trackPatch:H.Pitch] Running Loop=1
2018-09-23T04:25:33.928Z,1537676733.928 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-23T04:25:33.928Z,1537676733.928 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-23T04:25:34.262Z,1537676734.262 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-23T04:25:34.263Z,1537676734.263 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-23T04:25:56.714Z,1537676756.714 [Radio_Surface](INFO): Powering down
2018-09-23T04:25:59.915Z,1537676759.915 [ElevatorOffsetCalculator](INFO): New estimator for commanded vars: speed 1.00 m/s, pitch -20.00 deg, mass-position 0.00 mm (2 active estimators).
2018-09-23T04:26:05.479Z,1537676765.479 [NAL9602](INFO): Powering down
2018-09-23T04:26:09.899Z,1537676769.899 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-23T04:26:09.899Z,1537676769.899 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-3278,-32768,-32768,V
2018-09-23T04:26:25.938Z,1537676785.938 [ElevatorOffsetCalculator](INFO): New estimator for commanded vars: speed 1.00 m/s, pitch 20.00 deg, mass-position 0.00 mm (3 active estimators).
2018-09-23T04:26:37.908Z,1537676797.908 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-23T04:26:37.908Z,1537676797.908 [RDI_Pathfinder](ERROR): Failed to parse:
:TS1321207,35.0, -0.1,   0.0,1448.9,  0
2018-09-23T04:26:59.105Z,1537676819.105 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T04:27:05.124Z,1537676825.124 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-23T04:27:05.124Z,1537676825.124 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092221323  0.0,1448.9,  0
2018-09-23T04:27:52.749Z,1537676872.749 [RDI_Pathfinder](ERROR): Failed to parse:
:H8d,0ffe, 14.046, -0.143, 0.000
2018-09-23T04:27:59.100Z,1537676879.100 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T04:28:34.300Z,1537676914.300 [DataOverHttps](INFO): setting unavailable, lastComms_.elapsed()=180.076706
2018-09-23T04:29:52.746Z,1537676992.746 [RDI_Pathfinder](ERROR): Failed to parse:
0e8d,0ffe, 14.019, -0.140, 0.000
2018-09-23T04:29:59.535Z,1537676999.535 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T04:30:43.430Z,1537677043.430 [CBIT](IMPORTANT): Beginning ground fault scan
2018-09-23T04:30:54.448Z,1537677054.448 [CBIT](IMPORTANT): Ground fault detected
mA:
CHAN A0 (Batt): 0.111588
CHAN A1 (24V): -0.026831
CHAN A2 (12V): -0.007665
CHAN A3 (5V): -0.002027
CHAN B0 (3.3V): 0.000526
CHAN B1 (3.15aV): 0.000066
CHAN B2 (3.15bV): 0.000308
CHAN B3 (GND): 0.002203
OPEN: 0.005406
Full Scale Calc: 4.765 mA, -1.589 mA
2018-09-23T04:30:59.528Z,1537677059.528 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T04:31:59.529Z,1537677119.529 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T04:32:59.529Z,1537677179.529 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T04:33:39.570Z,1537677219.570 [RDI_Pathfinder](ERROR): Failed to parse:
:HM,G,D,0e8d,0fff, 13.993, -0.149, 0.000
2018-09-23T04:34:00.324Z,1537677240.324 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T04:35:00.327Z,1537677300.327 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T04:36:01.124Z,1537677361.124 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T04:37:00.727Z,1537677420.727 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T04:38:01.538Z,1537677481.538 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T04:39:01.924Z,1537677541.924 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T04:40:01.924Z,1537677601.924 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T04:41:02.324Z,1537677662.324 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T04:42:02.328Z,1537677722.328 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T04:42:15.582Z,1537677735.582 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint] Stopped
2018-09-23T04:42:15.582Z,1537677735.582 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-23T04:42:15.582Z,1537677735.582 [trackPatch:PatchDetectHorizontal:CrossLeg:D] Running Loop=1
2018-09-23T04:42:16.006Z,1537677736.006 [trackPatch:PatchDetectHorizontal:CrossLeg:D](IMPORTANT): CrossPeakWp done. Lat, lon = 36.839260 arcdeg , -121.910783 arcdeg . Patch value is nan ug/l at lat = nan arcdeg , lon = nan arcdeg , dep = nan m , distance = 0.000000 m 
2018-09-23T04:42:16.007Z,1537677736.007 [trackPatch:PatchDetectHorizontal:CrossLeg:D] Stopped
2018-09-23T04:42:16.007Z,1537677736.007 [trackPatch:PatchDetectHorizontal:CrossLeg:AssignPatchDetectOffInCrossLeg] Running Loop=1
2018-09-23T04:42:16.360Z,1537677736.360 [trackPatch:PatchDetectHorizontal:CrossLeg:AssignPatchDetectOffInCrossLeg] Stopped
2018-09-23T04:42:16.360Z,1537677736.360 [trackPatch:PatchDetectHorizontal:CrossLeg:AssignWpDoneInCrossLeg] Running Loop=1
2018-09-23T04:42:16.783Z,1537677736.783 [trackPatch:PatchDetectHorizontal:CrossLeg] Stopped
2018-09-23T04:42:16.783Z,1537677736.783 [trackPatch:PatchDetectHorizontal:CrossLeg](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal:CrossLeg
2018-09-23T04:42:16.784Z,1537677736.784 [trackPatch:PatchDetectHorizontal:CrossLeg:AssignWpDoneInCrossLeg] Stopped
2018-09-23T04:42:16.784Z,1537677736.784 [trackPatch:PatchDetectHorizontal:AssignWpBearingForInLeg] Running Loop=1
2018-09-23T04:42:17.190Z,1537677737.190 [trackPatch:PatchDetectHorizontal:AssignWpBearingForInLeg] Stopped
2018-09-23T04:42:17.190Z,1537677737.190 [trackPatch:PatchDetectHorizontal:F] Running Loop=1
2018-09-23T04:42:17.618Z,1537677737.618 [trackPatch:PatchDetectHorizontal:F](IMPORTANT): Next: bearing for InLeg: 90.000000 arcdeg . Current lat, lon = 36.839261 arcdeg , -121.910800 arcdeg . Patch value is nan ug/l at lat = nan arcdeg , lon = nan arcdeg , dep = nan m , distance = 0.000000 m 
2018-09-23T04:42:17.619Z,1537677737.619 [trackPatch:PatchDetectHorizontal:F] Stopped
2018-09-23T04:42:17.619Z,1537677737.619 [trackPatch:PatchDetectHorizontal:InLegWp.Waypoint] Running Loop=1
2018-09-23T04:42:17.619Z,1537677737.619 [trackPatch:PatchDetectHorizontal:InLegWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-23T04:42:17.976Z,1537677737.976 [trackPatch:PatchDetectHorizontal:InLegWp.Waypoint] Stopped
2018-09-23T04:42:17.976Z,1537677737.976 [trackPatch:PatchDetectHorizontal:InLegWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-23T04:42:17.976Z,1537677737.976 [trackPatch:PatchDetectHorizontal:AssignWpBearingForOutLeg] Running Loop=1
2018-09-23T04:42:18.374Z,1537677738.374 [trackPatch:PatchDetectHorizontal:AssignWpBearingForOutLeg] Stopped
2018-09-23T04:42:18.374Z,1537677738.374 [trackPatch:PatchDetectHorizontal:I] Running Loop=1
2018-09-23T04:42:18.787Z,1537677738.787 [trackPatch:PatchDetectHorizontal:I](IMPORTANT): Next: bearing for OutLeg: 0.000000 arcdeg . WpMaxDistance = 1000.000000 m . Current lat, lon = 36.839262 arcdeg , -121.910813 arcdeg . Patch value is nan ug/l at lat = nan arcdeg , lon = nan arcdeg , dep = nan m , distance = 0.000000 m 
2018-09-23T04:42:18.788Z,1537677738.788 [trackPatch:PatchDetectHorizontal:I] Stopped
2018-09-23T04:42:18.789Z,1537677738.789 [trackPatch:PatchDetectHorizontal:J] Running Loop=1
2018-09-23T04:42:18.789Z,1537677738.789 [trackPatch:PatchDetectHorizontal:J](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal:J
2018-09-23T04:42:19.195Z,1537677739.195 [trackPatch:SurfaceCommsSplit] Running Loop=1
2018-09-23T04:42:19.195Z,1537677739.195 [trackPatch:SurfaceCommsSplit](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit
2018-09-23T04:42:19.196Z,1537677739.196 [trackPatch:SurfaceCommsSplit:A.GoToSurface] Running Loop=1
2018-09-23T04:42:19.196Z,1537677739.196 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T04:42:19.196Z,1537677739.196 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-23T04:42:19.196Z,1537677739.196 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-23T04:42:19.201Z,1537677739.201 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-23T04:42:19.201Z,1537677739.201 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T04:42:19.202Z,1537677739.202 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T04:42:36.163Z,1537677756.163 [trackPatch:SurfaceCommsSplit:B] Running Loop=1
2018-09-23T04:42:36.163Z,1537677756.163 [trackPatch:SurfaceCommsSplit:B](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit:B
2018-09-23T04:42:36.163Z,1537677756.163 [trackPatch:SurfaceCommsSplit:B:A] Running Loop=1
2018-09-23T04:42:36.462Z,1537677756.462 [Radio_Surface](INFO): Powering up
2018-09-23T04:42:36.619Z,1537677756.619 [trackPatch:SurfaceCommsSplit:B:A](INFO): ##UnpackSplit##
2018-09-23T04:42:36.620Z,1537677756.620 [trackPatch:SurfaceCommsSplit:B:A] Stopped
2018-09-23T04:42:36.620Z,1537677756.620 [trackPatch:SurfaceCommsSplit:B](INFO): Completed trackPatch:SurfaceCommsSplit:B
2018-09-23T04:42:36.620Z,1537677756.620 [trackPatch:SurfaceCommsSplit:B] Stopped
2018-09-23T04:42:36.620Z,1537677756.620 [trackPatch:SurfaceCommsSplit:B](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit:B
2018-09-23T04:42:36.620Z,1537677756.620 [trackPatch:SurfaceCommsSplit:C] Running Loop=1
2018-09-23T04:42:36.620Z,1537677756.620 [trackPatch:SurfaceCommsSplit:C](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit:C
2018-09-23T04:42:36.620Z,1537677756.620 [trackPatch:SurfaceCommsSplit:C:A] Running Loop=1
2018-09-23T04:42:36.948Z,1537677756.948 [trackPatch:M.YoYo] Preempted
2018-09-23T04:42:36.948Z,1537677756.948 [trackPatch:L.DepthEnvelope] Preempted
2018-09-23T04:42:36.948Z,1537677756.948 [trackPatch:K.SetSpeed] Preempted
2018-09-23T04:42:36.948Z,1537677756.948 [trackPatch:Science] Preempted
2018-09-23T04:42:36.948Z,1537677756.948 [trackPatch:Science:G] Preempted
2018-09-23T04:42:36.948Z,1537677756.948 [trackPatch:Science:Read_Oil] Preempted
2018-09-23T04:42:36.949Z,1537677756.949 [trackPatch:Science:PeakDetectChl] Preempted
2018-09-23T04:42:36.949Z,1537677756.949 [trackPatch:I.Buoyancy] Preempted
2018-09-23T04:42:36.949Z,1537677756.949 [trackPatch:H.Pitch] Preempted
2018-09-23T04:42:36.949Z,1537677756.949 [trackPatch:G.WaterDepthEnvelope] Preempted
2018-09-23T04:42:36.949Z,1537677756.949 [trackPatch:F.OffshoreEnvelope] Preempted
2018-09-23T04:42:37.178Z,1537677757.178 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-23T04:42:37.302Z,1537677757.302 [NAL9602](INFO): Powering up
2018-09-23T04:42:46.630Z,1537677766.630 [BuoyancyServo](ERROR): getPosition uart error serial timeout
2018-09-23T04:42:46.630Z,1537677766.630 [BuoyancyServo](FAULT): Buoyancy getPosition uart error.serial timeout
2018-09-23T04:42:46.630Z,1537677766.630 [BuoyancyServo] Communications Fault, FailCount= 1
2018-09-23T04:42:46.631Z,1537677766.631 [BuoyancyServo](ERROR): Communications Fault
2018-09-23T04:42:46.750Z,1537677766.750 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-09-23T04:42:46.847Z,1537677766.847 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-23T04:42:46.848Z,1537677766.848 [BuoyancyServo](INFO): Powering down
2018-09-23T04:42:48.382Z,1537677768.382 [NAL9602](INFO): NAL9602 initialized
2018-09-23T04:42:48.451Z,1537677768.451 [BuoyancyServo](FAULT): LCB fault:  Current Limiter Activated.
2018-09-23T04:42:48.451Z,1537677768.451 [BuoyancyServo] Hardware Fault, FailCount= 1
2018-09-23T04:42:48.451Z,1537677768.451 [BuoyancyServo](ERROR): Hardware Fault
2018-09-23T04:42:48.862Z,1537677768.862 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-23T04:42:48.862Z,1537677768.862 [BuoyancyServo] No Fault, FailCount= 1
2018-09-23T04:42:49.250Z,1537677769.250 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-23T04:42:49.370Z,1537677769.370 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-23T04:43:02.781Z,1537677782.781 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T04:43:03.576Z,1537677783.576 [NAL9602](INFO): SBD MO Status=0, MOMSN=1206, MT Status=0, MTMSN=0
2018-09-23T04:43:03.576Z,1537677783.576 [NAL9602](INFO): No messages in MT queue
2018-09-23T04:44:02.772Z,1537677842.772 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T04:44:07.179Z,1537677847.179 [NAL9602](INFO): GPS fix at 20180923T044357: (36.839798, -121.911372)
2018-09-23T04:44:07.242Z,1537677847.242 [UniversalFixResidualReporter](INFO): Fix residual: 6.8 %DT, over the last 975.0 m. Residual distance 66.4 m at bearing 150.3 degrees. Fix at (36.8398, -121.9114) with 1007.2 m made good.
2018-09-23T04:44:07.243Z,1537677847.243 [trackPatch:SurfaceCommsSplit:C:A] Stopped
2018-09-23T04:44:07.243Z,1537677847.243 [trackPatch:SurfaceCommsSplit:C:B] Running Loop=1
2018-09-23T04:44:24.148Z,1537677864.148 [NAL9602](INFO): SBD MO Status=1, MOMSN=1207, MT Status=0, MTMSN=0
2018-09-23T04:44:24.197Z,1537677864.197 [NAL9602](INFO): Sent 73 bytes from file Logs/20180922T190757/Courier0138.lzma
2018-09-23T04:44:24.197Z,1537677864.197 [NAL9602](INFO): Packets left to send: 0
2018-09-23T04:44:24.199Z,1537677864.199 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Courier0138.lzma.parts/0000.sbd
2018-09-23T04:44:24.199Z,1537677864.199 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Courier0138.lzma
2018-09-23T04:44:33.972Z,1537677873.972 [NAL9602](INFO): SBD MO Status=1, MOMSN=1208, MT Status=0, MTMSN=0
2018-09-23T04:44:34.025Z,1537677874.025 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0139.lzma
2018-09-23T04:44:34.025Z,1537677874.025 [NAL9602](INFO): Packets left to send: 4
2018-09-23T04:44:34.027Z,1537677874.027 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0139.lzma.parts/0004.sbd
2018-09-23T04:44:45.724Z,1537677885.724 [NAL9602](INFO): SBD MO Status=1, MOMSN=1209, MT Status=0, MTMSN=0
2018-09-23T04:44:45.773Z,1537677885.773 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0139.lzma
2018-09-23T04:44:45.774Z,1537677885.774 [NAL9602](INFO): Packets left to send: 3
2018-09-23T04:44:45.775Z,1537677885.775 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0139.lzma.parts/0003.sbd
2018-09-23T04:44:55.080Z,1537677895.080 [NAL9602](INFO): SBD MO Status=1, MOMSN=1210, MT Status=0, MTMSN=0
2018-09-23T04:44:55.133Z,1537677895.133 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0139.lzma
2018-09-23T04:44:55.133Z,1537677895.133 [NAL9602](INFO): Packets left to send: 2
2018-09-23T04:44:55.134Z,1537677895.134 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0139.lzma.parts/0002.sbd
2018-09-23T04:45:03.216Z,1537677903.216 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T04:45:08.828Z,1537677908.828 [NAL9602](INFO): SBD MO Status=1, MOMSN=1211, MT Status=0, MTMSN=0
2018-09-23T04:45:08.877Z,1537677908.877 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0139.lzma
2018-09-23T04:45:08.877Z,1537677908.877 [NAL9602](INFO): Packets left to send: 1
2018-09-23T04:45:08.878Z,1537677908.878 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0139.lzma.parts/0001.sbd
2018-09-23T04:45:20.972Z,1537677920.972 [NAL9602](INFO): SBD MO Status=1, MOMSN=1212, MT Status=0, MTMSN=0
2018-09-23T04:45:21.033Z,1537677921.033 [NAL9602](INFO): Sent 290 bytes from file Logs/20180922T190757/Express0139.lzma
2018-09-23T04:45:21.033Z,1537677921.033 [NAL9602](INFO): Packets left to send: 0
2018-09-23T04:45:21.034Z,1537677921.034 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0139.lzma.parts/0000.sbd
2018-09-23T04:45:21.035Z,1537677921.035 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Express0139.lzma
2018-09-23T04:45:34.176Z,1537677934.176 [NAL9602](INFO): SBD MO Status=0, MOMSN=1213, MT Status=0, MTMSN=0
2018-09-23T04:45:34.282Z,1537677934.282 [trackPatch:SurfaceCommsSplit:C:B] Stopped
2018-09-23T04:45:34.282Z,1537677934.282 [trackPatch:SurfaceCommsSplit:C:C] Running Loop=1
2018-09-23T04:45:36.570Z,1537677936.570 [NAL9602](INFO): GPS fix at 20180923T044526: (36.839846, -121.911523)
2018-09-23T04:45:36.663Z,1537677936.663 [trackPatch:SurfaceCommsSplit:C:C] Stopped
2018-09-23T04:45:36.663Z,1537677936.663 [trackPatch:SurfaceCommsSplit:C](INFO): Completed trackPatch:SurfaceCommsSplit:C
2018-09-23T04:45:36.663Z,1537677936.663 [trackPatch:SurfaceCommsSplit:C] Stopped
2018-09-23T04:45:36.664Z,1537677936.664 [trackPatch:SurfaceCommsSplit:C](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit:C
2018-09-23T04:45:36.664Z,1537677936.664 [trackPatch:SurfaceCommsSplit](INFO): Completed trackPatch:SurfaceCommsSplit
2018-09-23T04:45:36.665Z,1537677936.665 [trackPatch:SurfaceCommsSplit] Stopped
2018-09-23T04:45:36.665Z,1537677936.665 [trackPatch:SurfaceCommsSplit](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit
2018-09-23T04:45:36.665Z,1537677936.665 [trackPatch:SurfaceCommsSplit:A.GoToSurface] Stopped
2018-09-23T04:45:36.665Z,1537677936.665 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-23T04:45:37.025Z,1537677937.025 [trackPatch:PatchDetectHorizontal:J](INFO): Completed trackPatch:PatchDetectHorizontal:J
2018-09-23T04:45:37.026Z,1537677937.026 [trackPatch:PatchDetectHorizontal:J] Stopped
2018-09-23T04:45:37.026Z,1537677937.026 [trackPatch:PatchDetectHorizontal:J](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal:J
2018-09-23T04:45:37.026Z,1537677937.026 [trackPatch:PatchDetectHorizontal:AssignPatchDetectOnForOutLeg] Running Loop=1
2018-09-23T04:45:37.026Z,1537677937.026 [trackPatch:M.YoYo] Running Loop=1
2018-09-23T04:45:37.027Z,1537677937.027 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-23T04:45:37.028Z,1537677937.028 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-23T04:45:37.028Z,1537677937.028 [trackPatch:Science] Running Loop=1
2018-09-23T04:45:37.034Z,1537677937.034 [trackPatch:Science:PeakDetectChl] Running Loop=1
2018-09-23T04:45:37.034Z,1537677937.034 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-23T04:45:37.035Z,1537677937.035 [trackPatch:Science:G] Running Loop=1
2018-09-23T04:45:37.035Z,1537677937.035 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-23T04:45:37.035Z,1537677937.035 [trackPatch:H.Pitch] Running Loop=1
2018-09-23T04:45:37.036Z,1537677937.036 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-23T04:45:37.036Z,1537677937.036 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-23T04:45:37.109Z,1537677937.109 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-23T04:45:37.109Z,1537677937.109 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-23T04:45:37.434Z,1537677937.434 [trackPatch:PatchDetectHorizontal:AssignPatchDetectOnForOutLeg] Stopped
2018-09-23T04:45:37.434Z,1537677937.434 [trackPatch:PatchDetectHorizontal:OutLeg] Running Loop=1
2018-09-23T04:45:37.435Z,1537677937.435 [trackPatch:PatchDetectHorizontal:OutLeg](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal:OutLeg
2018-09-23T04:45:37.435Z,1537677937.435 [trackPatch:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint] Running Loop=1
2018-09-23T04:45:37.435Z,1537677937.435 [trackPatch:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-23T04:45:59.860Z,1537677959.860 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.007153
2018-09-23T04:46:02.234Z,1537677962.234 [Radio_Surface](INFO): Powering down
2018-09-23T04:46:02.308Z,1537677962.308 [trackPatch](INFO): Timed out from 2018-09-23T04:16:02.3Z
2018-09-23T04:46:02.308Z,1537677962.308 [MissionManager](INFO): trackPatch is completed.
2018-09-23T04:46:02.308Z,1537677962.308 [MissionManager](INFO): Uninitializing Mission trackPatch
2018-09-23T04:46:02.308Z,1537677962.308 [trackPatch] Stopped
2018-09-23T04:46:02.309Z,1537677962.309 [trackPatch](DEBUG): Aggregate::uninitialize trackPatch
2018-09-23T04:46:02.309Z,1537677962.309 [trackPatch:A.AltitudeEnvelope] Stopped
2018-09-23T04:46:02.309Z,1537677962.309 [trackPatch:A.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-23T04:46:02.309Z,1537677962.309 [trackPatch:B.DepthEnvelope] Stopped
2018-09-23T04:46:02.309Z,1537677962.309 [trackPatch:B.DepthEnvelope](DEBUG): Uninitialize.
2018-09-23T04:46:02.309Z,1537677962.309 [trackPatch:F.OffshoreEnvelope] Stopped
2018-09-23T04:46:02.309Z,1537677962.309 [trackPatch:F.OffshoreEnvelope](DEBUG): Uninitialize OffshoreEnvelopeComponent.
2018-09-23T04:46:02.309Z,1537677962.309 [trackPatch:G.WaterDepthEnvelope] Stopped
2018-09-23T04:46:02.310Z,1537677962.310 [trackPatch:G.WaterDepthEnvelope](DEBUG): Uninitialize WaterDepthEnvelopeComponent.
2018-09-23T04:46:02.310Z,1537677962.310 [trackPatch:H.Pitch] Stopped
2018-09-23T04:46:02.310Z,1537677962.310 [trackPatch:I.Buoyancy] Stopped
2018-09-23T04:46:02.310Z,1537677962.310 [trackPatch:I.Buoyancy](DEBUG): Uninitialize Buoyancy Component.
2018-09-23T04:46:02.310Z,1537677962.310 [trackPatch:Science] Stopped
2018-09-23T04:46:02.310Z,1537677962.310 [trackPatch:Science](DEBUG): Aggregate::uninitialize trackPatch:Science
2018-09-23T04:46:02.310Z,1537677962.310 [trackPatch:Science:G] Stopped
2018-09-23T04:46:02.310Z,1537677962.310 [trackPatch:Science:Read_Oil] Stopped
2018-09-23T04:46:02.310Z,1537677962.310 [trackPatch:Science:PeakDetectChl] Stopped
2018-09-23T04:46:02.310Z,1537677962.310 [trackPatch:Science:PeakDetectChl](DEBUG): Aggregate::uninitialize trackPatch:Science:PeakDetectChl
2018-09-23T04:46:02.310Z,1537677962.310 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2018-09-23T04:46:02.311Z,1537677962.311 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-23T04:46:02.311Z,1537677962.311 [trackPatch:K.SetSpeed] Stopped
2018-09-23T04:46:02.311Z,1537677962.311 [trackPatch:K.SetSpeed](DEBUG): Uninitialize.
2018-09-23T04:46:02.311Z,1537677962.311 [trackPatch:L.DepthEnvelope] Stopped
2018-09-23T04:46:02.311Z,1537677962.311 [trackPatch:L.DepthEnvelope](DEBUG): Uninitialize.
2018-09-23T04:46:02.311Z,1537677962.311 [trackPatch:M.YoYo] Stopped
2018-09-23T04:46:02.311Z,1537677962.311 [trackPatch:M.YoYo](DEBUG): Uninitialize YoYoComponent.
2018-09-23T04:46:02.311Z,1537677962.311 [trackPatch:PatchDetectHorizontal] Stopped
2018-09-23T04:46:02.311Z,1537677962.311 [trackPatch:PatchDetectHorizontal](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal
2018-09-23T04:46:02.311Z,1537677962.311 [trackPatch:PatchDetectHorizontal:PatchDetection] Stopped
2018-09-23T04:46:02.311Z,1537677962.311 [trackPatch:PatchDetectHorizontal:PatchDetection](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal:PatchDetection
2018-09-23T04:46:02.312Z,1537677962.312 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal] Stopped
2018-09-23T04:46:02.312Z,1537677962.312 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-23T04:46:02.312Z,1537677962.312 [trackPatch:PatchDetectHorizontal:OutLeg] Stopped
2018-09-23T04:46:02.312Z,1537677962.312 [trackPatch:PatchDetectHorizontal:OutLeg](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal:OutLeg
2018-09-23T04:46:02.312Z,1537677962.312 [trackPatch:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint] Stopped
2018-09-23T04:46:02.312Z,1537677962.312 [trackPatch:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-23T04:46:02.709Z,1537677962.709 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-23T04:46:02.746Z,1537677962.746 [MissionManager](IMPORTANT): Started mission Default
2018-09-23T04:46:02.746Z,1537677962.746 [Default] Running Loop=1
2018-09-23T04:46:02.746Z,1537677962.746 [Default](DEBUG): Aggregate::initialize Default
2018-09-23T04:46:02.746Z,1537677962.746 [Default:B.GoToSurface] Running Loop=1
2018-09-23T04:46:02.747Z,1537677962.747 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T04:46:02.747Z,1537677962.747 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-23T04:46:02.747Z,1537677962.747 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-23T04:46:02.748Z,1537677962.748 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-23T04:46:02.748Z,1537677962.748 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T04:46:02.748Z,1537677962.748 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T04:46:02.757Z,1537677962.757 [Default:A.Wait] Running Loop=1
2018-09-23T04:46:02.757Z,1537677962.757 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-23T04:46:08.422Z,1537677968.422 [NAL9602](INFO): Powering down
2018-09-23T04:46:16.080Z,1537677976.080 [Default:A.Wait](INFO): Done Waiting.
2018-09-23T04:46:16.080Z,1537677976.080 [Default:A.Wait] Stopped
2018-09-23T04:46:16.080Z,1537677976.080 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-23T04:46:23.323Z,1537677983.323 [Default:CheckIn] Running Loop=1
2018-09-23T04:46:23.323Z,1537677983.323 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-23T04:46:23.323Z,1537677983.323 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-23T04:46:23.670Z,1537677983.670 [Radio_Surface](INFO): Powering up
2018-09-23T04:46:24.024Z,1537677984.024 [NAL9602](INFO): Powering up
2018-09-23T04:46:37.537Z,1537677997.537 [NAL9602](INFO): NAL9602 initialized
2018-09-23T04:47:08.332Z,1537678028.332 [NAL9602](INFO): SBD MO Status=2, MOMSN=1214, MT Status=2, MTMSN=0
2018-09-23T04:47:08.332Z,1537678028.332 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-23T04:47:18.332Z,1537678038.332 [NAL9602](INFO): SBD MO Status=0, MOMSN=1214, MT Status=0, MTMSN=0
2018-09-23T04:47:18.332Z,1537678038.332 [NAL9602](INFO): No messages in MT queue
2018-09-23T04:47:59.034Z,1537678079.034 [NAL9602](INFO): GPS fix at 20180923T044748: (36.840262, -121.911933)
2018-09-23T04:47:59.087Z,1537678079.087 [Default:CheckIn:Read_GPS] Stopped
2018-09-23T04:47:59.087Z,1537678079.087 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-23T04:48:03.702Z,1537678083.702 [DataOverHttps](INFO): Sending 62 bytes from file Logs/20180922T190757/Courier0141.lzma
2018-09-23T04:48:04.438Z,1537678084.438 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0141.lzma.bak
2018-09-23T04:48:04.438Z,1537678084.438 [DataOverHttps](INFO): SBD MOMSN=8564883
2018-09-23T04:48:13.988Z,1537678093.988 [DataOverHttps](INFO): Sending 194 bytes from file Logs/20180922T190757/Express0142.lzma
2018-09-23T04:48:17.182Z,1537678097.182 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0142.lzma.bak
2018-09-23T04:48:17.182Z,1537678097.182 [DataOverHttps](INFO): SBD MOMSN=8564886
2018-09-23T04:48:17.705Z,1537678097.705 [Default:CheckIn:Read_Iridium] Stopped
2018-09-23T04:48:17.705Z,1537678097.705 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-23T04:48:17.706Z,1537678097.706 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-23T04:48:33.930Z,1537678113.930 [NAL9602](INFO): Powering down
2018-09-23T04:53:18.374Z,1537678398.374 [Default:CheckIn:C.Wait](INFO): Done Waiting.
2018-09-23T04:53:18.374Z,1537678398.374 [Default:CheckIn:C.Wait] Stopped
2018-09-23T04:53:18.374Z,1537678398.374 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-23T04:53:18.375Z,1537678398.375 [Default:CheckIn:D] Running Loop=1
2018-09-23T04:53:18.802Z,1537678398.802 [Default:CheckIn:D] Stopped
2018-09-23T04:53:18.802Z,1537678398.802 [Default:CheckIn:E] Running Loop=1
2018-09-23T04:53:19.184Z,1537678399.184 [Default:CheckIn:E](IMPORTANT): Default mission has been running for 7.267592 min 
2018-09-23T04:53:19.185Z,1537678399.185 [Default:CheckIn:E] Stopped
2018-09-23T04:53:19.185Z,1537678399.185 [Default:CheckIn](INFO): Completed Default:CheckIn
2018-09-23T04:53:19.185Z,1537678399.185 [Default:CheckIn] Stopped
2018-09-23T04:53:19.185Z,1537678399.185 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-23T04:53:19.186Z,1537678399.186 [Default:CheckIn](INFO): Running loop #2
2018-09-23T04:53:19.186Z,1537678399.186 [Default:CheckIn] Running Loop=2
2018-09-23T04:53:19.186Z,1537678399.186 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-23T04:53:19.186Z,1537678399.186 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-23T04:53:22.511Z,1537678402.511 [NAL9602](INFO): Powering up
2018-09-23T04:53:33.675Z,1537678413.675 [NAL9602](INFO): NAL9602 initialized
2018-09-23T04:53:43.275Z,1537678423.275 [NAL9602](INFO): SBD MO Status=0, MOMSN=1215, MT Status=0, MTMSN=0
2018-09-23T04:53:43.276Z,1537678423.276 [NAL9602](INFO): No messages in MT queue
2018-09-23T04:54:35.795Z,1537678475.795 [DataOverHttps](IMPORTANT): SBD MTMSN=20180923T045425
2018-09-23T04:54:44.698Z,1537678484.698 [DataOverHttps](INFO): Received command:load Science/sci2.xml;set sci2.MissionTimeout 1 hour;set sci2.NeedCommsTime 30 minute;set sci2.Lat1 36.8342 degree;set sci2.Lon1 -121.898 angular_degree;set sci2.YoYoMaxDepth 30 meter;set sci2.MaxDepth 35 meter;run 
2018-09-23T04:54:44.708Z,1537678484.708 [CommandLine](IMPORTANT): got command load ./Missions/Science/sci2.xml
2018-09-23T04:54:44.709Z,1537678484.709 [MissionManager](INFO): Loading Mission: ./Missions/Science/sci2.xml
2018-09-23T04:54:44.946Z,1537678484.946 [MissionManager](INFO): DefineArg sci2.MissionTimeout = 2.000000 h
2018-09-23T04:54:44.949Z,1537678484.949 [MissionManager](INFO): DefineArg sci2.NeedCommsTime = 60.000000 min
2018-09-23T04:54:44.964Z,1537678484.964 [MissionManager](INFO): DefineArg sci2.Repeat = 1.000000 count
2018-09-23T04:54:44.966Z,1537678484.966 [MissionManager](INFO): DefineArg sci2.Lat1 = nan arcdeg
2018-09-23T04:54:44.968Z,1537678484.968 [MissionManager](INFO): DefineArg sci2.Lon1 = nan arcdeg
2018-09-23T04:54:44.970Z,1537678484.970 [MissionManager](INFO): DefineArg sci2.Lat2 = nan arcdeg
2018-09-23T04:54:44.972Z,1537678484.972 [MissionManager](INFO): DefineArg sci2.Lon2 = nan arcdeg
2018-09-23T04:54:44.986Z,1537678484.986 [MissionManager](INFO): DefineArg sci2.Lat3 = nan arcdeg
2018-09-23T04:54:44.988Z,1537678484.988 [MissionManager](INFO): DefineArg sci2.Lon3 = nan arcdeg
2018-09-23T04:54:44.991Z,1537678484.991 [MissionManager](INFO): DefineArg sci2.Lat4 = nan arcdeg
2018-09-23T04:54:44.993Z,1537678484.993 [MissionManager](INFO): DefineArg sci2.Lon4 = nan arcdeg
2018-09-23T04:54:44.995Z,1537678484.995 [MissionManager](INFO): DefineArg sci2.Lat5 = nan arcdeg
2018-09-23T04:54:45.001Z,1537678485.001 [MissionManager](INFO): DefineArg sci2.Lon5 = nan arcdeg
2018-09-23T04:54:45.003Z,1537678485.003 [MissionManager](INFO): DefineArg sci2.Lat6 = nan arcdeg
2018-09-23T04:54:45.005Z,1537678485.005 [MissionManager](INFO): DefineArg sci2.Lon6 = nan arcdeg
2018-09-23T04:54:45.007Z,1537678485.007 [MissionManager](INFO): DefineArg sci2.Lat7 = nan arcdeg
2018-09-23T04:54:45.009Z,1537678485.009 [MissionManager](INFO): DefineArg sci2.Lon7 = nan arcdeg
2018-09-23T04:54:45.011Z,1537678485.011 [MissionManager](INFO): DefineArg sci2.Speed = 1.000000 m/s
2018-09-23T04:54:45.035Z,1537678485.035 [MissionManager](INFO): DefineArg sci2.YoYoMinDepth = 2.000000 m
2018-09-23T04:54:45.037Z,1537678485.037 [MissionManager](INFO): DefineArg sci2.YoYoMaxDepth = 200.000000 m
2018-09-23T04:54:45.039Z,1537678485.039 [MissionManager](INFO): DefineArg sci2.YoYoMinAltitude = 9.000000 m
2018-09-23T04:54:45.042Z,1537678485.042 [MissionManager](INFO): DefineArg sci2.YoYoUpPitch = 20.000000 arcdeg
2018-09-23T04:54:45.044Z,1537678485.044 [MissionManager](INFO): DefineArg sci2.YoYoDownPitch = -20.000000 arcdeg
2018-09-23T04:54:45.057Z,1537678485.057 [MissionManager](INFO): DefineArg sci2.BuoyancyNeutral = 205.000004 cc
2018-09-23T04:54:45.060Z,1537678485.060 [MissionManager](INFO): DefineArg sci2.MassDefault = 0.000000 cm
2018-09-23T04:54:45.062Z,1537678485.062 [MissionManager](INFO): DefineArg sci2.MinAltitude = 5.000000 m
2018-09-23T04:54:45.064Z,1537678485.064 [MissionManager](INFO): DefineArg sci2.MaxDepth = 205.000000 m
2018-09-23T04:54:45.082Z,1537678485.082 [MissionManager](INFO): DefineArg sci2.MinOffshore = 2.000000 km
2018-09-23T04:54:45.082Z,1537678485.082 [MissionManager](INFO): Inserting Stack: Missions/Insert/Science.xml
2018-09-23T04:54:45.362Z,1537678485.362 [MissionManager](INFO): DefineArg sci2:Science.SampleISUS = 0 bool
2018-09-23T04:54:45.364Z,1537678485.364 [MissionManager](INFO): DefineArg sci2:Science.SampleISUSmaxPitch = 60.000000 arcdeg
2018-09-23T04:54:45.367Z,1537678485.367 [MissionManager](INFO): DefineArg sci2:Science.SampleISUSminPitch = -60.000000 arcdeg
2018-09-23T04:54:45.369Z,1537678485.369 [MissionManager](INFO): DefineArg sci2:Science.PeakDetectChlActive = 0 bool
2018-09-23T04:54:45.371Z,1537678485.371 [MissionManager](INFO): DefineArg sci2:Science.HighestChlPeakReportActive = 0 bool
2018-09-23T04:54:45.373Z,1537678485.373 [MissionManager](INFO): DefineArg sci2:Science.PatchTracking = 1 bool
2018-09-23T04:54:45.375Z,1537678485.375 [MissionManager](INFO): DefineArg sci2:Science.FilterWidthHorizontal = 3.000000 count
2018-09-23T04:54:45.377Z,1537678485.377 [MissionManager](INFO): DefineArg sci2:Science.NumProfilesSlidingwindow = 100.000000 count
2018-09-23T04:54:45.379Z,1537678485.379 [MissionManager](INFO): DefineArg sci2:Science.OffPeakFractionHorizontal = 80.000000 %
2018-09-23T04:54:45.381Z,1537678485.381 [MissionManager](INFO): DefineArg sci2:Science.PeakDetectNO3Active = 0 bool
2018-09-23T04:54:45.383Z,1537678485.383 [MissionManager](INFO): DefineArg sci2:Science.PeakDetectOilActive = 0 bool
2018-09-23T04:54:45.385Z,1537678485.385 [MissionManager](INFO): DefineArg sci2:Science.UpwardDerivativeOfTemperatureActive = 0 bool
2018-09-23T04:54:45.387Z,1537678485.387 [MissionManager](INFO): DefineArg sci2:Science.EnabledAanderaaO2 = 0.000000 bool
2018-09-23T04:54:45.390Z,1537678485.390 [MissionManager](INFO): DefineArg sci2:Science.EnabledNeilBrown = 0.000000 bool
2018-09-23T04:54:45.392Z,1537678485.392 [MissionManager](INFO): DefineArg sci2:Science.EnabledSeabird = 0.000000 bool
2018-09-23T04:54:45.395Z,1537678485.395 [MissionManager](INFO): DefineArg sci2:Science.EnabledTurbulence_NPS = 0.000000 bool
2018-09-23T04:54:45.443Z,1537678485.443 [MissionManager](INFO): DefineArg sci2:Science.EnabledWetLabsBB2FL = 0.000000 bool
2018-09-23T04:54:45.446Z,1537678485.446 [MissionManager](INFO): DefineArg sci2:Science.EnabledWetLabsSeaOWL_UV_A = 1.000000 bool
2018-09-23T04:54:45.448Z,1537678485.448 [MissionManager](INFO): DefineArg sci2:Science.EnabledISUS = 0.000000 bool
2018-09-23T04:54:45.450Z,1537678485.450 [MissionManager](INFO): DefineArg sci2:Science.LowPassWindowLength = 20.000000 count
2018-09-23T04:54:45.452Z,1537678485.452 [MissionManager](INFO): DefineArg sci2:Science.PeakChlShallowBound = 10.000000 m
2018-09-23T04:54:45.470Z,1537678485.470 [MissionManager](INFO): DefineArg sci2:Science.PeakChlDeepBound = 20.000000 m
2018-09-23T04:54:45.472Z,1537678485.472 [MissionManager](INFO): DefineOutput sci2:Science.PeakChl = 0.000000 ug/l
2018-09-23T04:54:45.474Z,1537678485.474 [MissionManager](INFO): DefineOutput sci2:Science.PeakChlDepth = 0.000000 m
2018-09-23T04:54:45.492Z,1537678485.492 [MissionManager](INFO): DefineOutput sci2:Science.PeakChlTemperature = 0.000000 degC
2018-09-23T04:54:45.494Z,1537678485.494 [MissionManager](INFO): DefineOutput sci2:Science.PeakChlLatitude = nan arcdeg
2018-09-23T04:54:45.497Z,1537678485.497 [MissionManager](INFO): DefineOutput sci2:Science.PeakChlLongitude = nan arcdeg
2018-09-23T04:54:45.499Z,1537678485.499 [MissionManager](INFO): DefineOutput sci2:Science.PeakNO3 = 0.000000 umol/l
2018-09-23T04:54:45.516Z,1537678485.516 [MissionManager](INFO): DefineOutput sci2:Science.PeakNO3Depth = 0.000000 m
2018-09-23T04:54:45.519Z,1537678485.519 [MissionManager](INFO): DefineOutput sci2:Science.PeakNO3Latitude = nan arcdeg
2018-09-23T04:54:45.521Z,1537678485.521 [MissionManager](INFO): DefineOutput sci2:Science.PeakNO3Longitude = nan arcdeg
2018-09-23T04:54:45.523Z,1537678485.523 [MissionManager](INFO): DefineOutput sci2:Science.PatchChl = 0.000000 m
2018-09-23T04:54:45.541Z,1537678485.541 [MissionManager](INFO): DefineOutput sci2:Science.PatchChlDepth = 0.000000 m
2018-09-23T04:54:45.543Z,1537678485.543 [MissionManager](INFO): DefineOutput sci2:Science.PatchChlLatitude = nan arcdeg
2018-09-23T04:54:45.546Z,1537678485.546 [MissionManager](INFO): DefineOutput sci2:Science.PatchChlLongitude = nan arcdeg
2018-09-23T04:54:45.548Z,1537678485.548 [MissionManager](INFO): DefineOutput sci2:Science.PatchChlDistance = nan m
2018-09-23T04:54:45.566Z,1537678485.566 [MissionManager](INFO): DefineOutput sci2:Science.PeakOil = 0.000000 kg/m3
2018-09-23T04:54:45.568Z,1537678485.568 [MissionManager](INFO): DefineOutput sci2:Science.PeakOilDepth = 0.000000 m
2018-09-23T04:54:45.571Z,1537678485.571 [MissionManager](INFO): DefineOutput sci2:Science.PeakOilLatitude = nan arcdeg
2018-09-23T04:54:45.588Z,1537678485.588 [MissionManager](INFO): DefineOutput sci2:Science.PeakOilLongitude = nan arcdeg
2018-09-23T04:54:45.617Z,1537678485.617 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-23T04:54:45.644Z,1537678485.644 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-23T04:54:45.686Z,1537678485.686 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-23T04:54:45.712Z,1537678485.712 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-23T04:54:45.720Z,1537678485.720 [MissionManager](INFO): RedefineArg sci2:Science.SampleISUS = value:1 bool
2018-09-23T04:54:45.734Z,1537678485.734 [MissionManager](INFO): RedefineArg sci2:Science.PeakDetectChlActive = value:1 bool
2018-09-23T04:54:45.735Z,1537678485.735 [MissionManager](INFO): Inserting Stack: Missions/Insert/NeedComms.xml
2018-09-23T04:54:45.794Z,1537678485.794 [MissionManager](INFO): DefineArg sci2:NeedComms.DiveInterval = 3.000000 h
2018-09-23T04:54:45.796Z,1537678485.796 [MissionManager](INFO): DefineArg sci2:NeedComms.WaitForPitchUp = 10.000000 min
2018-09-23T04:54:45.799Z,1537678485.799 [MissionManager](INFO): DefineArg sci2:NeedComms.SurfacePitch = 20.000000 arcdeg
2018-09-23T04:54:45.801Z,1537678485.801 [MissionManager](INFO): DefineArg sci2:NeedComms.SurfaceDepthRate = nan m/s
2018-09-23T04:54:45.803Z,1537678485.803 [MissionManager](INFO): DefineArg sci2:NeedComms.SurfaceSpeed = 1.000000 m/s
2018-09-23T04:54:45.807Z,1537678485.807 [MissionManager](INFO): DefineArg sci2:NeedComms.GPSTimeout = 7.000000 min
2018-09-23T04:54:45.811Z,1537678485.811 [MissionManager](INFO): DefineArg sci2:NeedComms.CommsTimeout = 30.000000 min
2018-09-23T04:54:45.827Z,1537678485.827 [sci2:NeedComms:B.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-23T04:54:45.870Z,1537678485.870 [MissionManager](INFO): Inserting Stack: Missions/Insert/StandardEnvelopes.xml
2018-09-23T04:54:45.908Z,1537678485.908 [MissionManager](INFO): DefineArg sci2:StandardEnvelopes.MinAltitude = 5.000000 m
2018-09-23T04:54:45.915Z,1537678485.915 [MissionManager](INFO): DefineArg sci2:StandardEnvelopes.MaxDepth = 200.000000 m
2018-09-23T04:54:45.921Z,1537678485.921 [MissionManager](INFO): DefineArg sci2:StandardEnvelopes.MinOffshore = 2000.000000 m
2018-09-23T04:54:45.922Z,1537678485.922 [sci2:StandardEnvelopes:A.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-23T04:54:45.928Z,1537678485.928 [sci2:StandardEnvelopes:B.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-23T04:54:45.947Z,1537678485.947 [sci2:StandardEnvelopes:C.OffshoreEnvelope](DEBUG): Construct OffshoreEnvelope.
2018-09-23T04:54:45.961Z,1537678485.961 [sci2:I.Pitch](DEBUG): Construct.
2018-09-23T04:54:45.965Z,1537678485.965 [sci2:J.Buoyancy](DEBUG): Construct Buoyancy.
2018-09-23T04:54:45.967Z,1537678485.967 [sci2:K.SetSpeed](DEBUG): Construct.
2018-09-23T04:54:45.969Z,1537678485.969 [sci2:L.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-23T04:54:45.976Z,1537678485.976 [sci2:M.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-23T04:54:45.981Z,1537678485.981 [sci2:N.YoYo](DEBUG): Construct YoYo.
2018-09-23T04:54:45.988Z,1537678485.988 [sci2:Lap:Wpt1:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-23T04:54:46.006Z,1537678486.006 [sci2:Lap:Wpt2:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-23T04:54:46.011Z,1537678486.011 [sci2:Lap:Wpt3:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-23T04:54:46.016Z,1537678486.016 [sci2:Lap:Wpt4:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-23T04:54:46.020Z,1537678486.020 [sci2:Lap:Wpt5:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-23T04:54:46.025Z,1537678486.025 [sci2:Lap:Wpt6:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-23T04:54:46.030Z,1537678486.030 [sci2:Lap:Wpt7:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-23T04:54:46.070Z,1537678486.070 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<!-- ====================
     Generated by TethysL
     ==================== -->
<Mission xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xmlns="Tethys"
         xmlns:Units="Tethys/Units"
         xmlns:Control="Tethys/Control"
         xmlns:Guidance="Tethys/Guidance"
         xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                             Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                             Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                             Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd"
       Id="sci2">

    <Description>
        Vehicle yo-yo's to the specified waypoints, with science turned on.
    </Description>
    <DefineArg Name="MissionTimeout"><Description>
        Maximum duration of mission
    </Description><Units:hour/><Value>2</Value></DefineArg>

    <DefineArg Name="NeedCommsTime"><Description>
        How often to surface for commumications
    </Description><Units:minute/><Value>60</Value></DefineArg>

    <DefineArg Name="Repeat"><Description>
        Number of times the vehicle should try to cycle through waypoints..
    </Description><Units:count/><Value>1</Value></DefineArg>

    <DefineArg Name="Lat1"><Description>
        Latitude of waypoint 1. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon1"><Description>
        Longitude of waypoint 1. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat2"><Description>
        Latitude of waypoint 2. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon2"><Description>
        Longitude of waypoint 2. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat3"><Description>
        Latitude of waypoint 3. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon3"><Description>
        Longitude of waypoint 3. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat4"><Description>
        Latitude of waypoint 4. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon4"><Description>
        Longitude of waypoint 4. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat5"><Description>
        Latitude of waypoint 5. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon5"><Description>
        Longitude of waypoint 5. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat6"><Description>
        Latitude of waypoint 6. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon6"><Description>
        Longitude of waypoint 6. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lat7"><Description>
        Latitude of waypoint 7. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Lon7"><Description>
        Longitude of waypoint 7. If nan, waypoint is skipped.
    </Description><Units:degree/><Value>NaN</Value></DefineArg>

    <DefineArg Name="Speed"><Description>
        Speed while performing the YoYo behavior.
    </Description><Units:meter_per_second/><Value>1</Value></DefineArg>

    <DefineArg Name="YoYoMinDepth"><Description>
        Minimum depth while performing the YoYo behavior.
    </Description><Units:meter/><Value>2</Value></DefineArg>

    <DefineArg Name="YoYoMaxDepth"><Description>
        Maximum depth while performing the YoYo behavior.
    </Description><Units:meter/><Value>200</Value></DefineArg>

    <DefineArg Name="YoYoMinAltitude"><Description>
        Minimum altitude while performing the YoYo behavior (for
        bottom-terminated YoYos).
    </Description><Units:meter/><Value>9</Value></DefineArg>

    <DefineArg Name="YoYoUpPitch"><Description>
        Vehicle up pitch while performing the YoYo behavior.
    </Description><Units:degree/><Value>20</Value></DefineArg>

    <DefineArg Name="YoYoDownPitch"><Description>
        Vehicle down pitch while performing the YoYo behavior.
    </Description><Units:degree/><Value>-20</Value></DefineArg>

    <DefineArg Name="BuoyancyNeutral"><Description>
        Buoyancy bladder position while performing the YoYo behavior. Defaults
        to buoyancyNeutral setting in the Config/Control.cfg file. Set to NaN cc
        for active buoyancy
    </Description><Control:VerticalControl.buoyancyNeutral/></DefineArg>

    <DefineArg Name="MassDefault"><Description>
        Static setting for mass during the mission. Set to NaN mm for active
        mass position
    </Description><Control:VerticalControl.massDefault/></DefineArg>

    <DefineArg Name="MinAltitude"><Description>
        Minimum height above the sea floor for the entire mission.
    </Description><Units:meter/><Value>5</Value></DefineArg>

    <DefineArg Name="MaxDepth"><Description>
        Maximum depth for the entire mission.
    </Description><Units:meter/><Value>205</Value></DefineArg>

    <DefineArg Name="MinOffshore"><Description>
        Minimum offshore distance for the entire mission.
    </Description><Units:kilometer/><Value>2</Value></DefineArg>
    <Timeout Duration="MissionTimeout"/>

    <Insert Filename="Insert/Science.xml">
        <Description>
            Most missions will run the science sensors. If you don't place this
            aggregate above NeedComms, science instruments get turned off on the
            last upcast and while floating on the surface.
        </Description>
        <RedefineArg Name="SampleISUS"><True/></RedefineArg>
        <RedefineArg Name="PeakDetectChlActive"><True/></RedefineArg>
    </Insert>

    <Insert Filename="Insert/NeedComms.xml" Id="NeedComms"/>

    <Assign><Sequence/><Arg Name="NeedComms:DiveInterval"/><Arg Name="NeedCommsTime"/></Assign>

    <Insert Filename="Insert/StandardEnvelopes.xml"/>

    <Assign><Sequence/><Arg Name="StandardEnvelopes:MinAltitude"/><Arg Name="MinAltitude"/></Assign>

    <Assign><Sequence/><Arg Name="StandardEnvelopes:MaxDepth"/><Arg Name="MaxDepth"/></Assign>

    <Assign><Sequence/><Arg Name="StandardEnvelopes:MinOffshore"/><Arg Name="MinOffshore"/></Assign>

    <Call Id="StartingMission" RefId="NeedComms"/>

    <Guidance:Pitch>
        <Parallel/>
        <Setting><Guidance:Pitch.massPosition/><Arg Name="MassDefault"/></Setting>
    </Guidance:Pitch>

    <Guidance:Buoyancy>
        <Parallel/>
        <Setting><Guidance:Buoyancy.position/><Arg Name="BuoyancyNeutral"/></Setting>
    </Guidance:Buoyancy>

    <Guidance:SetSpeed>
        <Parallel/>
        <Setting><Guidance:SetSpeed.speed/><Arg Name="Speed"/></Setting>
    </Guidance:SetSpeed>

    <Guidance:DepthEnvelope>
        <Description>
            Another depth envelope for the YoYo behavior. This envelope should
            fall within the limits of the standard safety envelopes in
            Insert/StandardEnvelopes.xml in order to avoid commanding high pitch
            angles for depth-terminated YoYos.
        </Description>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.minDepth/><Arg Name="YoYoMinDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="YoYoMaxDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:DepthEnvelope.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:DepthEnvelope>

    <Guidance:AltitudeEnvelope>
        <Description>
            Another altitude envelope for the YoYo behavior. This envelope
            should fall within the limits of the standard safety envelopes in
            Insert/StandardEnvelopes.xml in order to avoid commanding high pitch
            angles for bottom-terminated YoYos.
        </Description>
        <Parallel/>
        <Setting><Guidance:AltitudeEnvelope.minAltitude/><Arg Name="YoYoMinAltitude"/></Setting>
        <Setting><Guidance:AltitudeEnvelope.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:AltitudeEnvelope>

    <Guidance:YoYo>
        <Parallel/>
        <Setting><Guidance:YoYo.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:YoYo.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:YoYo>

    <Aggregate Id="Lap">
        <Sequence Repeat="Repeat"/>

        <Aggregate Id="Wpt1">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat1"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon1"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt2">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat2"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon2"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt3">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat3"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon3"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt4">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat4"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon4"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt5">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat5"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon5"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt6">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat6"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon6"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>

        <Aggregate Id="Wpt7">
            <Sequence/>

            <Guidance:Waypoint>
                <Sequence/>
                <Setting><Guidance:Waypoint.latitude/><Arg Name="Lat7"/></Setting>
                <Setting><Guidance:Waypoint.longitude/><Arg Name="Lon7"/></Setting>
            </Guidance:Waypoint>
        </Aggregate>
    </Aggregate>
</Mission>

2018-09-23T04:54:46.070Z,1537678486.070 [CommandLine](IMPORTANT): Loaded ./Missions/Science/sci2.xml
2018-09-23T04:54:54.535Z,1537678494.535 [CommandLine](IMPORTANT): got command set sci2.MissionTimeout 1.000000 hour
2018-09-23T04:54:54.536Z,1537678494.536 [CommandLine](IMPORTANT): got command set sci2.NeedCommsTime 30.000000 minute
2018-09-23T04:54:54.547Z,1537678494.547 [CommandLine](IMPORTANT): got command set sci2.Lat1 36.834202 degree
2018-09-23T04:54:54.548Z,1537678494.548 [CommandLine](IMPORTANT): got command set sci2.Lon1 -121.898003 angular_degree
2018-09-23T04:54:54.549Z,1537678494.549 [CommandLine](IMPORTANT): got command set sci2.YoYoMaxDepth 30.000000 meter
2018-09-23T04:54:54.550Z,1537678494.550 [CommandLine](IMPORTANT): got command set sci2.MaxDepth 35.000000 meter
2018-09-23T04:54:54.551Z,1537678494.551 [CommandLine](IMPORTANT): got command run 
2018-09-23T04:54:54.553Z,1537678494.553 [CommandLine](IMPORTANT): Running 
2018-09-23T04:54:54.585Z,1537678494.585 [RDI_Pathfinder](ERROR): No DVL communication! Re-initializing
2018-09-23T04:54:54.586Z,1537678494.586 [RDI_Pathfinder] Communications Fault, FailCount= 1
2018-09-23T04:54:54.586Z,1537678494.586 [RDI_Pathfinder](ERROR): Communications Fault
2018-09-23T04:54:54.646Z,1537678494.646 [Default] Stopped
2018-09-23T04:54:54.646Z,1537678494.646 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-23T04:54:54.646Z,1537678494.646 [Default:B.GoToSurface] Stopped
2018-09-23T04:54:54.646Z,1537678494.646 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-23T04:54:54.646Z,1537678494.646 [Default:CheckIn] Stopped
2018-09-23T04:54:54.647Z,1537678494.647 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-23T04:54:54.647Z,1537678494.647 [Default:CheckIn:Read_GPS] Stopped
2018-09-23T04:54:54.647Z,1537678494.647 [MissionManager](IMPORTANT): Started mission sci2
2018-09-23T04:54:54.647Z,1537678494.647 [sci2] Running Loop=1
2018-09-23T04:54:54.647Z,1537678494.647 [sci2](DEBUG): Aggregate::initialize sci2
2018-09-23T04:54:54.647Z,1537678494.647 [sci2:Science] Running Loop=1
2018-09-23T04:54:54.648Z,1537678494.648 [sci2:Science](DEBUG): Aggregate::initialize sci2:Science
2018-09-23T04:54:54.648Z,1537678494.648 [sci2:Science:A] Running Loop=1
2018-09-23T04:54:54.648Z,1537678494.648 [sci2:Science:B] Running Loop=1
2018-09-23T04:54:54.648Z,1537678494.648 [sci2:Science:C] Running Loop=1
2018-09-23T04:54:54.648Z,1537678494.648 [sci2:Science:D] Running Loop=1
2018-09-23T04:54:54.648Z,1537678494.648 [sci2:Science:E] Running Loop=1
2018-09-23T04:54:54.648Z,1537678494.648 [sci2:Science:F] Running Loop=1
2018-09-23T04:54:54.648Z,1537678494.648 [sci2:Science:G] Running Loop=1
2018-09-23T04:54:54.648Z,1537678494.648 [sci2:Science:Read_Oil] Running Loop=1
2018-09-23T04:54:54.648Z,1537678494.648 [sci2:Science:PeakDetectChl] Running Loop=1
2018-09-23T04:54:54.648Z,1537678494.648 [sci2:Science:PeakDetectChl](DEBUG): Aggregate::initialize sci2:Science:PeakDetectChl
2018-09-23T04:54:54.649Z,1537678494.649 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2018-09-23T04:54:54.649Z,1537678494.649 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-23T04:54:54.650Z,1537678494.650 [sci2:Science:HighestChlPeakReport] Running Loop=1
2018-09-23T04:54:54.650Z,1537678494.650 [sci2:Science:HighestChlPeakReport](DEBUG): Aggregate::initialize sci2:Science:HighestChlPeakReport
2018-09-23T04:54:54.650Z,1537678494.650 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2018-09-23T04:54:54.650Z,1537678494.650 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2018-09-23T04:54:54.651Z,1537678494.651 [sci2:Science:PeakDetectNO3] Running Loop=1
2018-09-23T04:54:54.651Z,1537678494.651 [sci2:Science:PeakDetectNO3](DEBUG): Aggregate::initialize sci2:Science:PeakDetectNO3
2018-09-23T04:54:54.651Z,1537678494.651 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2018-09-23T04:54:54.651Z,1537678494.651 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-23T04:54:54.652Z,1537678494.652 [sci2:Science:PeakDetectOil] Running Loop=1
2018-09-23T04:54:54.652Z,1537678494.652 [sci2:Science:PeakDetectOil](DEBUG): Aggregate::initialize sci2:Science:PeakDetectOil
2018-09-23T04:54:54.652Z,1537678494.652 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2018-09-23T04:54:54.652Z,1537678494.652 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-23T04:54:54.674Z,1537678494.674 [sci2:StandardEnvelopes] Running Loop=1
2018-09-23T04:54:54.674Z,1537678494.674 [sci2:StandardEnvelopes](DEBUG): Aggregate::initialize sci2:StandardEnvelopes
2018-09-23T04:54:54.674Z,1537678494.674 [sci2:StandardEnvelopes:A.AltitudeEnvelope] Running Loop=1
2018-09-23T04:54:54.674Z,1537678494.674 [sci2:StandardEnvelopes:A.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-23T04:54:54.674Z,1537678494.674 [sci2:StandardEnvelopes:B.DepthEnvelope] Running Loop=1
2018-09-23T04:54:54.674Z,1537678494.674 [sci2:StandardEnvelopes:B.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-23T04:54:54.674Z,1537678494.674 [sci2:StandardEnvelopes:C.OffshoreEnvelope] Running Loop=1
2018-09-23T04:54:54.674Z,1537678494.674 [sci2:StandardEnvelopes:C.OffshoreEnvelope](DEBUG): Initialize OffshoreEnvelopeComponent.
2018-09-23T04:54:54.675Z,1537678494.675 [sci2:I.Pitch] Running Loop=1
2018-09-23T04:54:54.675Z,1537678494.675 [sci2:I.Pitch](DEBUG): Initialize.
2018-09-23T04:54:54.675Z,1537678494.675 [sci2:J.Buoyancy] Running Loop=1
2018-09-23T04:54:54.675Z,1537678494.675 [sci2:J.Buoyancy](DEBUG): Initialize Buoyancy Component.
2018-09-23T04:54:54.675Z,1537678494.675 [sci2:K.SetSpeed] Running Loop=1
2018-09-23T04:54:54.675Z,1537678494.675 [sci2:K.SetSpeed](DEBUG): Initialize.
2018-09-23T04:54:54.675Z,1537678494.675 [sci2:L.DepthEnvelope] Running Loop=1
2018-09-23T04:54:54.675Z,1537678494.675 [sci2:L.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-23T04:54:54.676Z,1537678494.676 [sci2:M.AltitudeEnvelope] Running Loop=1
2018-09-23T04:54:54.676Z,1537678494.676 [sci2:M.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-23T04:54:54.676Z,1537678494.676 [sci2:N.YoYo] Running Loop=1
2018-09-23T04:54:54.676Z,1537678494.676 [sci2:N.YoYo](DEBUG): Initialize YoYoComponent.
2018-09-23T04:54:54.676Z,1537678494.676 [sci2:C] Running Loop=1
2018-09-23T04:54:54.677Z,1537678494.677 [sci2:N.YoYo] Running Loop=1
2018-09-23T04:54:54.678Z,1537678494.678 [sci2:M.AltitudeEnvelope] Running Loop=1
2018-09-23T04:54:54.679Z,1537678494.679 [sci2:L.DepthEnvelope] Running Loop=1
2018-09-23T04:54:54.682Z,1537678494.682 [sci2:K.SetSpeed] Running Loop=1
2018-09-23T04:54:54.683Z,1537678494.683 [sci2:J.Buoyancy] Running Loop=1
2018-09-23T04:54:54.684Z,1537678494.684 [sci2:I.Pitch] Running Loop=1
2018-09-23T04:54:54.685Z,1537678494.685 [sci2:StandardEnvelopes] Running Loop=1
2018-09-23T04:54:54.685Z,1537678494.685 [sci2:StandardEnvelopes:C.OffshoreEnvelope] Running Loop=1
2018-09-23T04:54:54.686Z,1537678494.686 [sci2:StandardEnvelopes:B.DepthEnvelope] Running Loop=1
2018-09-23T04:54:54.687Z,1537678494.687 [sci2:StandardEnvelopes:A.AltitudeEnvelope] Running Loop=1
2018-09-23T04:54:54.689Z,1537678494.689 [sci2:C] Stopped
2018-09-23T04:54:54.689Z,1537678494.689 [sci2:E] Running Loop=1
2018-09-23T04:54:54.689Z,1537678494.689 [sci2:Science] Running Loop=1
2018-09-23T04:54:54.692Z,1537678494.692 [sci2:Science:PeakDetectOil] Stopped
2018-09-23T04:54:54.692Z,1537678494.692 [sci2:Science:PeakDetectOil](DEBUG): Aggregate::uninitialize sci2:Science:PeakDetectOil
2018-09-23T04:54:54.692Z,1537678494.692 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2018-09-23T04:54:54.692Z,1537678494.692 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-23T04:54:54.701Z,1537678494.701 [sci2:Science:PeakDetectNO3] Stopped
2018-09-23T04:54:54.701Z,1537678494.701 [sci2:Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize sci2:Science:PeakDetectNO3
2018-09-23T04:54:54.701Z,1537678494.701 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2018-09-23T04:54:54.701Z,1537678494.701 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-23T04:54:54.701Z,1537678494.701 [sci2:Science:HighestChlPeakReport] Stopped
2018-09-23T04:54:54.701Z,1537678494.701 [sci2:Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize sci2:Science:HighestChlPeakReport
2018-09-23T04:54:54.702Z,1537678494.702 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2018-09-23T04:54:54.702Z,1537678494.702 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-23T04:54:54.702Z,1537678494.702 [sci2:Science:PeakDetectChl] Running Loop=1
2018-09-23T04:54:54.703Z,1537678494.703 [sci2:Science:Read_Oil] Running Loop=1
2018-09-23T04:54:54.703Z,1537678494.703 [sci2:Science:Read_Oil](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-23T04:54:54.704Z,1537678494.704 [sci2:Science:G] Running Loop=1
2018-09-23T04:54:54.705Z,1537678494.705 [sci2:Science:G](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-23T04:54:54.706Z,1537678494.706 [sci2:Science:F] Stopped
2018-09-23T04:54:54.706Z,1537678494.706 [sci2:Science:E] Stopped
2018-09-23T04:54:54.706Z,1537678494.706 [sci2:Science:D] Stopped
2018-09-23T04:54:54.706Z,1537678494.706 [sci2:Science:C] Stopped
2018-09-23T04:54:54.706Z,1537678494.706 [sci2:Science:B] Stopped
2018-09-23T04:54:54.706Z,1537678494.706 [sci2:Science:A] Stopped
2018-09-23T04:54:54.733Z,1537678494.733 [CBIT](ERROR): Communications Fault in component: RDI_Pathfinder
2018-09-23T04:54:54.901Z,1537678494.901 [RDI_Pathfinder](INFO): Powering down
2018-09-23T04:54:54.937Z,1537678494.937 [sci2:E] Stopped
2018-09-23T04:54:54.937Z,1537678494.937 [sci2:F] Running Loop=1
2018-09-23T04:54:55.058Z,1537678495.058 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-23T04:54:55.058Z,1537678495.058 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-23T04:54:55.230Z,1537678495.230 [sci2:F] Stopped
2018-09-23T04:54:55.230Z,1537678495.230 [sci2:G] Running Loop=1
2018-09-23T04:54:55.549Z,1537678495.549 [ThrusterServo](ERROR): Thruster uart error: serial timeout
2018-09-23T04:54:55.549Z,1537678495.549 [ThrusterServo] Communications Fault, FailCount= 1
2018-09-23T04:54:55.549Z,1537678495.549 [ThrusterServo](ERROR): Communications Fault
2018-09-23T04:54:55.564Z,1537678495.564 [CBIT](ERROR): Communications Fault in component: ThrusterServo
2018-09-23T04:54:55.649Z,1537678495.649 [sci2:G] Stopped
2018-09-23T04:54:55.649Z,1537678495.649 [sci2:StartingMission] Running Loop=1
2018-09-23T04:54:55.650Z,1537678495.650 [sci2:StartingMission](DEBUG): Aggregate::initialize sci2:StartingMission
2018-09-23T04:54:55.743Z,1537678495.743 [ThrusterServo](DEBUG): Uninitialize Thruster Servo.
2018-09-23T04:54:55.743Z,1537678495.743 [ThrusterServo](INFO): Powering down
2018-09-23T04:54:55.748Z,1537678495.748 [CBIT](INFO): Clearing failed state for component RDI_Pathfinder
2018-09-23T04:54:55.748Z,1537678495.748 [RDI_Pathfinder] No Fault, FailCount= 1
2018-09-23T04:54:56.065Z,1537678496.065 [sci2:NeedComms] Running Loop=1
2018-09-23T04:54:56.066Z,1537678496.066 [sci2:NeedComms](DEBUG): Aggregate::initialize sci2:NeedComms
2018-09-23T04:54:56.066Z,1537678496.066 [sci2:NeedComms:B.GoToSurface] Running Loop=1
2018-09-23T04:54:56.066Z,1537678496.066 [sci2:NeedComms:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T04:54:56.066Z,1537678496.066 [sci2:NeedComms:B.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-23T04:54:56.067Z,1537678496.067 [sci2:NeedComms:B.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-23T04:54:56.067Z,1537678496.067 [sci2:NeedComms:B.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-23T04:54:56.067Z,1537678496.067 [sci2:NeedComms:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T04:54:56.068Z,1537678496.068 [sci2:NeedComms:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T04:54:56.068Z,1537678496.068 [sci2:NeedComms:A] Running Loop=1
2018-09-23T04:54:56.074Z,1537678496.074 [sci2:NeedComms:A](INFO): last time_fix was: 1537678068.000000 second since 1970/01/01T00:00:00Z 
2018-09-23T04:54:56.075Z,1537678496.075 [sci2:NeedComms:A] Stopped
2018-09-23T04:54:56.443Z,1537678496.443 [sci2:NeedComms:C] Running Loop=1
2018-09-23T04:54:56.817Z,1537678496.817 [CBIT](INFO): Clearing failed state for component ThrusterServo
2018-09-23T04:54:56.817Z,1537678496.817 [ThrusterServo] No Fault, FailCount= 1
2018-09-23T04:54:56.901Z,1537678496.901 [sci2:NeedComms:C](DEBUG): Initialize ReadDataComponent to sense time_fix
2018-09-23T04:54:56.923Z,1537678496.923 [ThrusterServo](DEBUG): Initializing EZServoServo.
2018-09-23T04:54:56.931Z,1537678496.931 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2018-09-23T04:55:07.250Z,1537678507.250 [NAL9602](INFO): GPS fix at 20180923T045456: (36.840553, -121.912295)
2018-09-23T04:55:07.317Z,1537678507.317 [sci2:NeedComms:C] Stopped
2018-09-23T04:55:07.317Z,1537678507.317 [sci2:NeedComms:D] Running Loop=1
2018-09-23T04:55:07.713Z,1537678507.713 [sci2:NeedComms:D](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-23T04:55:09.282Z,1537678509.282 [RDI_Pathfinder](ERROR): Failed to parse:Pathfinder
2018-09-23T04:55:20.364Z,1537678520.364 [DataOverHttps](INFO): Sending 62 bytes from file Logs/20180922T190757/Courier0144.lzma
2018-09-23T04:55:21.558Z,1537678521.558 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0144.lzma.bak
2018-09-23T04:55:21.558Z,1537678521.558 [DataOverHttps](INFO): SBD MOMSN=8564936
2018-09-23T04:55:31.314Z,1537678531.314 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180922T190757/Courier0147.lzma
2018-09-23T04:55:32.086Z,1537678532.086 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0147.lzma.bak
2018-09-23T04:55:32.086Z,1537678532.086 [DataOverHttps](INFO): SBD MOMSN=8564939
2018-09-23T04:55:39.563Z,1537678539.563 [NAL9602](INFO): Powering down
2018-09-23T04:55:43.002Z,1537678543.002 [DataOverHttps](INFO): Sending 421 bytes from file Logs/20180922T190757/Express0145.lzma
2018-09-23T04:55:43.772Z,1537678543.772 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0145.lzma.bak
2018-09-23T04:55:43.781Z,1537678543.781 [DataOverHttps](INFO): SBD MOMSN=8564941
2018-09-23T04:55:54.678Z,1537678554.678 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180922T190757/Express0148.lzma
2018-09-23T04:55:55.476Z,1537678555.476 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0148.lzma.bak
2018-09-23T04:55:55.489Z,1537678555.489 [DataOverHttps](INFO): SBD MOMSN=8564956
2018-09-23T04:55:55.987Z,1537678555.987 [sci2:NeedComms:D] Stopped
2018-09-23T04:55:55.987Z,1537678555.987 [sci2:NeedComms:E] Running Loop=1
2018-09-23T04:55:56.338Z,1537678556.338 [sci2:NeedComms:E](DEBUG): Initialize ReadDataComponent to sense time_fix
2018-09-23T04:55:59.590Z,1537678559.591 [NAL9602](INFO): Powering up
2018-09-23T04:56:10.539Z,1537678570.539 [NAL9602](INFO): NAL9602 initialized
2018-09-23T04:56:25.015Z,1537678585.015 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-23T04:56:25.015Z,1537678585.015 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,        +0.00,   0.00, 76.00
2018-09-23T04:56:35.748Z,1537678595.748 [NAL9602](INFO): SBD MO Status=0, MOMSN=1216, MT Status=0, MTMSN=0
2018-09-23T04:56:35.748Z,1537678595.748 [NAL9602](INFO): No messages in MT queue
2018-09-23T04:57:35.302Z,1537678655.302 [NAL9602](INFO): GPS fix at 20180923T045724: (36.840627, -121.912444)
2018-09-23T04:57:35.376Z,1537678655.376 [sci2:NeedComms:E] Stopped
2018-09-23T04:57:35.381Z,1537678655.381 [sci2:NeedComms](INFO): Completed sci2:NeedComms
2018-09-23T04:57:35.381Z,1537678655.381 [sci2:NeedComms] Stopped
2018-09-23T04:57:35.382Z,1537678655.382 [sci2:NeedComms](DEBUG): Aggregate::uninitialize sci2:NeedComms
2018-09-23T04:57:35.382Z,1537678655.382 [sci2:NeedComms:B.GoToSurface] Stopped
2018-09-23T04:57:35.382Z,1537678655.382 [sci2:NeedComms:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-23T04:57:35.760Z,1537678655.760 [sci2:StartingMission](INFO): Completed sci2:StartingMission
2018-09-23T04:57:35.760Z,1537678655.760 [sci2:StartingMission] Stopped
2018-09-23T04:57:35.760Z,1537678655.760 [sci2:StartingMission](DEBUG): Aggregate::uninitialize sci2:StartingMission
2018-09-23T04:57:35.761Z,1537678655.761 [sci2:Lap] Running Loop=1
2018-09-23T04:57:35.765Z,1537678655.765 [sci2:Lap](DEBUG): Aggregate::initialize sci2:Lap
2018-09-23T04:57:35.765Z,1537678655.765 [sci2:Lap:Wpt1] Running Loop=1
2018-09-23T04:57:35.765Z,1537678655.765 [sci2:Lap:Wpt1](DEBUG): Aggregate::initialize sci2:Lap:Wpt1
2018-09-23T04:57:35.765Z,1537678655.765 [sci2:Lap:Wpt1:A.Waypoint] Running Loop=1
2018-09-23T04:57:35.765Z,1537678655.765 [sci2:Lap:Wpt1:A.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-23T04:57:55.466Z,1537678675.466 [Radio_Surface](INFO): Powering down
2018-09-23T04:58:07.694Z,1537678687.694 [NAL9602](INFO): Powering down
2018-09-23T04:58:09.314Z,1537678689.314 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-23T04:58:09.315Z,1537678689.315 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-3276,-32768,V
2018-09-23T04:58:12.938Z,1537678692.938 [RDI_Pathfinder](ERROR): Failed to parse:
:HM,G,D,0e8d,0ffe, 14.136, 0.000
2018-09-23T04:58:19.305Z,1537678699.305 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-23T04:58:19.306Z,1537678699.306 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092222035351,35.0, 0.0,1448.9,  0
2018-09-23T04:58:26.888Z,1537678706.888 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T04:59:00.891Z,1537678740.891 [DataOverHttps](INFO): setting unavailable, lastComms_.elapsed()=180.353607
2018-09-23T04:59:09.323Z,1537678749.323 [RDI_Pathfinder](ERROR): Failed to parse:
:HM,G,D,0e8d,0ffe, 14.026, -0.146, 0.000
2018-09-23T04:59:12.948Z,1537678752.948 [RDI_Pathfinder](ERROR): only read 1 of 1 data item for altitude
2018-09-23T04:59:12.948Z,1537678752.948 [RDI_Pathfinder](ERROR): Failed to parse:
:HM,,0fff, 14.026, -0.146, 0.000
2018-09-23T05:00:27.290Z,1537678827.290 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:01:27.684Z,1537678887.684 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:02:27.312Z,1537678947.312 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:02:58.955Z,1537678978.955 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for altitude
2018-09-23T05:02:58.955Z,1537678978.955 [RDI_Pathfinder](ERROR): Failed to parse:
:BD,        +0.00,        +0.00 +0.00,   0.00,469.99
2018-09-23T05:03:28.088Z,1537679008.088 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:03:29.311Z,1537679009.311 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-23T05:03:29.311Z,1537679009.311 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-3268,V
2018-09-23T05:04:28.488Z,1537679068.488 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:05:28.891Z,1537679128.891 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:05:48.947Z,1537679148.947 [RDI_Pathfinder](ERROR): Failed to parse:
    +0.00,        +0.00,        +0.00,   0.00,639.98
2018-09-23T05:06:29.288Z,1537679189.288 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:07:29.292Z,1537679249.292 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:08:29.688Z,1537679309.688 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:09:30.087Z,1537679370.087 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:10:30.088Z,1537679430.088 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:11:30.088Z,1537679490.088 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:12:30.488Z,1537679550.488 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:13:30.256Z,1537679610.256 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:14:30.247Z,1537679670.247 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:15:14.282Z,1537679714.282 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-23T05:15:14.282Z,1537679714.282 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092222204851,.1,   0.0,1448.9,  0
2018-09-23T05:15:30.645Z,1537679730.645 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:16:30.680Z,1537679790.680 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:17:22.725Z,1537679842.725 [BPC1](INFO): Calculating totals. Valid battery stick count: 56. Valid reserve battery stick count: 6.
2018-09-23T05:17:31.080Z,1537679851.080 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:18:31.483Z,1537679911.483 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:19:31.482Z,1537679971.482 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:20:31.928Z,1537680031.928 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:21:31.904Z,1537680091.904 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:22:31.905Z,1537680151.905 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:23:32.289Z,1537680212.289 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:24:27.558Z,1537680267.558 [sci2:Lap:Wpt1:A.Waypoint](IMPORTANT): Reached Waypoint: 36.834203,-121.898004
2018-09-23T05:24:27.559Z,1537680267.559 [sci2:Lap:Wpt1:A.Waypoint] Stopped
2018-09-23T05:24:27.559Z,1537680267.559 [sci2:Lap:Wpt1:A.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-23T05:24:27.559Z,1537680267.559 [sci2:Lap:Wpt1](INFO): Completed sci2:Lap:Wpt1
2018-09-23T05:24:27.559Z,1537680267.559 [sci2:Lap:Wpt1] Stopped
2018-09-23T05:24:27.559Z,1537680267.559 [sci2:Lap:Wpt1](DEBUG): Aggregate::uninitialize sci2:Lap:Wpt1
2018-09-23T05:24:27.559Z,1537680267.559 [sci2:Lap:Wpt2] Running Loop=1
2018-09-23T05:24:27.560Z,1537680267.560 [sci2:Lap:Wpt2](DEBUG): Aggregate::initialize sci2:Lap:Wpt2
2018-09-23T05:24:27.560Z,1537680267.560 [sci2:Lap:Wpt2:A.Waypoint] Running Loop=1
2018-09-23T05:24:27.560Z,1537680267.560 [sci2:Lap:Wpt2:A.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-23T05:24:27.920Z,1537680267.920 [sci2:Lap:Wpt2:A.Waypoint] Stopped
2018-09-23T05:24:27.921Z,1537680267.921 [sci2:Lap:Wpt2:A.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-23T05:24:27.921Z,1537680267.921 [sci2:Lap:Wpt2](INFO): Completed sci2:Lap:Wpt2
2018-09-23T05:24:27.921Z,1537680267.921 [sci2:Lap:Wpt2] Stopped
2018-09-23T05:24:27.921Z,1537680267.921 [sci2:Lap:Wpt2](DEBUG): Aggregate::uninitialize sci2:Lap:Wpt2
2018-09-23T05:24:27.921Z,1537680267.921 [sci2:Lap:Wpt3] Running Loop=1
2018-09-23T05:24:27.921Z,1537680267.921 [sci2:Lap:Wpt3](DEBUG): Aggregate::initialize sci2:Lap:Wpt3
2018-09-23T05:24:27.921Z,1537680267.921 [sci2:Lap:Wpt3:A.Waypoint] Running Loop=1
2018-09-23T05:24:27.922Z,1537680267.922 [sci2:Lap:Wpt3:A.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-23T05:24:28.360Z,1537680268.360 [sci2:Lap:Wpt3:A.Waypoint] Stopped
2018-09-23T05:24:28.360Z,1537680268.360 [sci2:Lap:Wpt3:A.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-23T05:24:28.360Z,1537680268.360 [sci2:Lap:Wpt3](INFO): Completed sci2:Lap:Wpt3
2018-09-23T05:24:28.361Z,1537680268.361 [sci2:Lap:Wpt3] Stopped
2018-09-23T05:24:28.365Z,1537680268.365 [sci2:Lap:Wpt3](DEBUG): Aggregate::uninitialize sci2:Lap:Wpt3
2018-09-23T05:24:28.365Z,1537680268.365 [sci2:Lap:Wpt4] Running Loop=1
2018-09-23T05:24:28.365Z,1537680268.365 [sci2:Lap:Wpt4](DEBUG): Aggregate::initialize sci2:Lap:Wpt4
2018-09-23T05:24:28.365Z,1537680268.365 [sci2:Lap:Wpt4:A.Waypoint] Running Loop=1
2018-09-23T05:24:28.366Z,1537680268.366 [sci2:Lap:Wpt4:A.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-23T05:24:28.730Z,1537680268.730 [sci2:Lap:Wpt4:A.Waypoint] Stopped
2018-09-23T05:24:28.730Z,1537680268.730 [sci2:Lap:Wpt4:A.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-23T05:24:28.730Z,1537680268.730 [sci2:Lap:Wpt4](INFO): Completed sci2:Lap:Wpt4
2018-09-23T05:24:28.730Z,1537680268.730 [sci2:Lap:Wpt4] Stopped
2018-09-23T05:24:28.730Z,1537680268.730 [sci2:Lap:Wpt4](DEBUG): Aggregate::uninitialize sci2:Lap:Wpt4
2018-09-23T05:24:28.730Z,1537680268.730 [sci2:Lap:Wpt5] Running Loop=1
2018-09-23T05:24:28.730Z,1537680268.730 [sci2:Lap:Wpt5](DEBUG): Aggregate::initialize sci2:Lap:Wpt5
2018-09-23T05:24:28.730Z,1537680268.730 [sci2:Lap:Wpt5:A.Waypoint] Running Loop=1
2018-09-23T05:24:28.731Z,1537680268.731 [sci2:Lap:Wpt5:A.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-23T05:24:29.151Z,1537680269.151 [sci2:Lap:Wpt5:A.Waypoint] Stopped
2018-09-23T05:24:29.151Z,1537680269.151 [sci2:Lap:Wpt5:A.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-23T05:24:29.151Z,1537680269.151 [sci2:Lap:Wpt5](INFO): Completed sci2:Lap:Wpt5
2018-09-23T05:24:29.152Z,1537680269.152 [sci2:Lap:Wpt5] Stopped
2018-09-23T05:24:29.152Z,1537680269.152 [sci2:Lap:Wpt5](DEBUG): Aggregate::uninitialize sci2:Lap:Wpt5
2018-09-23T05:24:29.152Z,1537680269.152 [sci2:Lap:Wpt6] Running Loop=1
2018-09-23T05:24:29.152Z,1537680269.152 [sci2:Lap:Wpt6](DEBUG): Aggregate::initialize sci2:Lap:Wpt6
2018-09-23T05:24:29.152Z,1537680269.152 [sci2:Lap:Wpt6:A.Waypoint] Running Loop=1
2018-09-23T05:24:29.152Z,1537680269.152 [sci2:Lap:Wpt6:A.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-23T05:24:29.542Z,1537680269.542 [sci2:Lap:Wpt6:A.Waypoint] Stopped
2018-09-23T05:24:29.542Z,1537680269.542 [sci2:Lap:Wpt6:A.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-23T05:24:29.542Z,1537680269.542 [sci2:Lap:Wpt6](INFO): Completed sci2:Lap:Wpt6
2018-09-23T05:24:29.542Z,1537680269.542 [sci2:Lap:Wpt6] Stopped
2018-09-23T05:24:29.542Z,1537680269.542 [sci2:Lap:Wpt6](DEBUG): Aggregate::uninitialize sci2:Lap:Wpt6
2018-09-23T05:24:29.543Z,1537680269.543 [sci2:Lap:Wpt7] Running Loop=1
2018-09-23T05:24:29.543Z,1537680269.543 [sci2:Lap:Wpt7](DEBUG): Aggregate::initialize sci2:Lap:Wpt7
2018-09-23T05:24:29.543Z,1537680269.543 [sci2:Lap:Wpt7:A.Waypoint] Running Loop=1
2018-09-23T05:24:29.543Z,1537680269.543 [sci2:Lap:Wpt7:A.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-23T05:24:29.959Z,1537680269.959 [sci2:Lap:Wpt7:A.Waypoint] Stopped
2018-09-23T05:24:29.959Z,1537680269.959 [sci2:Lap:Wpt7:A.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-23T05:24:29.959Z,1537680269.959 [sci2:Lap:Wpt7](INFO): Completed sci2:Lap:Wpt7
2018-09-23T05:24:29.960Z,1537680269.960 [sci2:Lap:Wpt7] Stopped
2018-09-23T05:24:29.960Z,1537680269.960 [sci2:Lap:Wpt7](DEBUG): Aggregate::uninitialize sci2:Lap:Wpt7
2018-09-23T05:24:29.960Z,1537680269.960 [sci2:Lap](INFO): Completed sci2:Lap
2018-09-23T05:24:29.960Z,1537680269.960 [sci2:Lap] Stopped
2018-09-23T05:24:29.960Z,1537680269.960 [sci2:Lap](DEBUG): Aggregate::uninitialize sci2:Lap
2018-09-23T05:24:29.980Z,1537680269.980 [sci2](INFO): Completed sci2
2018-09-23T05:24:29.980Z,1537680269.980 [MissionManager](INFO): sci2 is completed.
2018-09-23T05:24:29.980Z,1537680269.980 [MissionManager](INFO): Uninitializing Mission sci2
2018-09-23T05:24:29.980Z,1537680269.980 [sci2] Stopped
2018-09-23T05:24:29.980Z,1537680269.980 [sci2](DEBUG): Aggregate::uninitialize sci2
2018-09-23T05:24:29.980Z,1537680269.980 [sci2:Science] Stopped
2018-09-23T05:24:29.981Z,1537680269.981 [sci2:Science](DEBUG): Aggregate::uninitialize sci2:Science
2018-09-23T05:24:29.985Z,1537680269.985 [sci2:Science:G] Stopped
2018-09-23T05:24:29.985Z,1537680269.985 [sci2:Science:Read_Oil] Stopped
2018-09-23T05:24:29.985Z,1537680269.985 [sci2:Science:PeakDetectChl] Stopped
2018-09-23T05:24:29.985Z,1537680269.985 [sci2:Science:PeakDetectChl](DEBUG): Aggregate::uninitialize sci2:Science:PeakDetectChl
2018-09-23T05:24:29.985Z,1537680269.985 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2018-09-23T05:24:29.985Z,1537680269.985 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-23T05:24:29.985Z,1537680269.985 [sci2:StandardEnvelopes] Stopped
2018-09-23T05:24:29.986Z,1537680269.986 [sci2:StandardEnvelopes](DEBUG): Aggregate::uninitialize sci2:StandardEnvelopes
2018-09-23T05:24:29.986Z,1537680269.986 [sci2:StandardEnvelopes:A.AltitudeEnvelope] Stopped
2018-09-23T05:24:29.986Z,1537680269.986 [sci2:StandardEnvelopes:A.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-23T05:24:29.986Z,1537680269.986 [sci2:StandardEnvelopes:B.DepthEnvelope] Stopped
2018-09-23T05:24:29.986Z,1537680269.986 [sci2:StandardEnvelopes:B.DepthEnvelope](DEBUG): Uninitialize.
2018-09-23T05:24:29.986Z,1537680269.986 [sci2:StandardEnvelopes:C.OffshoreEnvelope] Stopped
2018-09-23T05:24:29.986Z,1537680269.986 [sci2:StandardEnvelopes:C.OffshoreEnvelope](DEBUG): Uninitialize OffshoreEnvelopeComponent.
2018-09-23T05:24:29.986Z,1537680269.986 [sci2:I.Pitch] Stopped
2018-09-23T05:24:29.986Z,1537680269.986 [sci2:J.Buoyancy] Stopped
2018-09-23T05:24:29.986Z,1537680269.986 [sci2:J.Buoyancy](DEBUG): Uninitialize Buoyancy Component.
2018-09-23T05:24:29.986Z,1537680269.986 [sci2:K.SetSpeed] Stopped
2018-09-23T05:24:29.986Z,1537680269.986 [sci2:K.SetSpeed](DEBUG): Uninitialize.
2018-09-23T05:24:29.987Z,1537680269.987 [sci2:L.DepthEnvelope] Stopped
2018-09-23T05:24:29.987Z,1537680269.987 [sci2:L.DepthEnvelope](DEBUG): Uninitialize.
2018-09-23T05:24:29.987Z,1537680269.987 [sci2:M.AltitudeEnvelope] Stopped
2018-09-23T05:24:29.987Z,1537680269.987 [sci2:M.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-23T05:24:29.987Z,1537680269.987 [sci2:N.YoYo] Stopped
2018-09-23T05:24:29.987Z,1537680269.987 [sci2:N.YoYo](DEBUG): Uninitialize YoYoComponent.
2018-09-23T05:24:30.321Z,1537680270.321 [MissionManager](IMPORTANT): Started mission Default
2018-09-23T05:24:30.321Z,1537680270.321 [Default] Running Loop=1
2018-09-23T05:24:30.321Z,1537680270.321 [Default](DEBUG): Aggregate::initialize Default
2018-09-23T05:24:30.321Z,1537680270.321 [Default:B.GoToSurface] Running Loop=1
2018-09-23T05:24:30.321Z,1537680270.321 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T05:24:30.322Z,1537680270.322 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-23T05:24:30.322Z,1537680270.322 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-23T05:24:30.322Z,1537680270.322 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-23T05:24:30.323Z,1537680270.323 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T05:24:30.323Z,1537680270.323 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T05:24:30.324Z,1537680270.324 [Default:A.Wait] Running Loop=1
2018-09-23T05:24:30.324Z,1537680270.324 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-23T05:24:30.461Z,1537680270.461 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-23T05:24:32.513Z,1537680272.513 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:24:43.340Z,1537680283.340 [Default:A.Wait](INFO): Done Waiting.
2018-09-23T05:24:43.340Z,1537680283.340 [Default:A.Wait] Stopped
2018-09-23T05:24:43.340Z,1537680283.340 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-23T05:24:43.673Z,1537680283.673 [BuoyancyServo](ERROR): getPosition uart error serial timeout
2018-09-23T05:24:43.673Z,1537680283.673 [BuoyancyServo](FAULT): Buoyancy getPosition uart error.serial timeout
2018-09-23T05:24:43.673Z,1537680283.673 [BuoyancyServo] Communications Fault, FailCount= 2
2018-09-23T05:24:43.673Z,1537680283.673 [BuoyancyServo](ERROR): Communications Fault
2018-09-23T05:24:43.805Z,1537680283.805 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-09-23T05:24:43.918Z,1537680283.918 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-23T05:24:43.918Z,1537680283.918 [BuoyancyServo](INFO): Powering down
2018-09-23T05:24:45.537Z,1537680285.537 [BuoyancyServo](FAULT): LCB fault:  Current Limiter Activated.
2018-09-23T05:24:45.537Z,1537680285.537 [BuoyancyServo] Hardware Fault, FailCount= 2
2018-09-23T05:24:45.537Z,1537680285.537 [BuoyancyServo](ERROR): Hardware Fault
2018-09-23T05:24:45.969Z,1537680285.969 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-23T05:24:45.969Z,1537680285.969 [BuoyancyServo] No Fault, FailCount= 2
2018-09-23T05:24:46.308Z,1537680286.308 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-23T05:24:46.426Z,1537680286.426 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-23T05:25:32.680Z,1537680332.680 [Default:CheckIn] Running Loop=1
2018-09-23T05:25:32.680Z,1537680332.680 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-23T05:25:32.681Z,1537680332.681 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-23T05:25:32.934Z,1537680332.934 [Radio_Surface](INFO): Powering up
2018-09-23T05:25:33.033Z,1537680333.033 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:25:33.441Z,1537680333.441 [NAL9602](INFO): Powering up
2018-09-23T05:25:44.398Z,1537680344.398 [NAL9602](INFO): NAL9602 initialized
2018-09-23T05:26:06.404Z,1537680366.404 [NAL9602](INFO): SBD MO Status=2, MOMSN=1217, MT Status=2, MTMSN=0
2018-09-23T05:26:06.404Z,1537680366.404 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-23T05:26:28.008Z,1537680388.008 [NAL9602](INFO): SBD MO Status=2, MOMSN=1217, MT Status=2, MTMSN=0
2018-09-23T05:26:28.008Z,1537680388.008 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-23T05:26:33.200Z,1537680393.200 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:26:33.248Z,1537680393.248 [RDI_Pathfinder](ERROR): only read 1 of 1 data item for altitude
2018-09-23T05:26:33.249Z,1537680393.249 [RDI_Pathfinder](ERROR): Failed to parse:
:HM,G000
2018-09-23T05:26:50.004Z,1537680410.004 [NAL9602](IMPORTANT): SBD MO Status=0, MOMSN=1217, MT Status=1, MTMSN=54
2018-09-23T05:26:50.004Z,1537680410.004 [NAL9602](INFO): Data available in MT queue
2018-09-23T05:26:50.541Z,1537680410.541 [NAL9602](INFO): Received command:show best mass_concentration_of_chlorophyll_in_sea_water
2018-09-23T05:26:52.197Z,1537680412.197 [CommandLine](IMPORTANT): got command show best mass_concentration_of_chlorophyll_in_sea_water
2018-09-23T05:26:52.197Z,1537680412.197 [CommandLine](IMPORTANT): mass_concentration_of_chlorophyll_in_sea_water best is null
2018-09-23T05:26:53.186Z,1537680413.186 [NAL9602](INFO): GPS fix at 20180923T052642: (36.835576, -121.898918)
2018-09-23T05:26:53.251Z,1537680413.251 [UniversalFixResidualReporter](INFO): Fix residual: 14.3 %DT, over the last 1584.2 m. Residual distance 226.2 m at bearing 147.2 degrees. Fix at (36.8356, -121.8989) with 1328.4 m made good.
2018-09-23T05:26:53.252Z,1537680413.252 [Default:CheckIn:Read_GPS] Stopped
2018-09-23T05:26:53.252Z,1537680413.252 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-23T05:27:28.140Z,1537680448.140 [NAL9602](IMPORTANT): SBD MO Status=1, MOMSN=1218, MT Status=1, MTMSN=55
2018-09-23T05:27:28.193Z,1537680448.193 [NAL9602](INFO): Sent 90 bytes from file Logs/20180922T190757/Courier0150.lzma
2018-09-23T05:27:28.194Z,1537680448.194 [NAL9602](INFO): Packets left to send: 0
2018-09-23T05:27:28.195Z,1537680448.195 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Courier0150.lzma.parts/0000.sbd
2018-09-23T05:27:28.196Z,1537680448.196 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Courier0150.lzma
2018-09-23T05:27:28.641Z,1537680448.641 [NAL9602](INFO): Received command:stop
2018-09-23T05:27:28.709Z,1537680448.709 [CommandLine](IMPORTANT): got command stop
2018-09-23T05:27:28.710Z,1537680448.710 [Supervisor](INFO): Stop Mission called by CommandLine::commandStop
2018-09-23T05:27:33.336Z,1537680453.336 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:27:50.728Z,1537680470.728 [NAL9602](INFO): SBD MO Status=1, MOMSN=1219, MT Status=0, MTMSN=0
2018-09-23T05:27:50.773Z,1537680470.773 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0151.lzma
2018-09-23T05:27:50.773Z,1537680470.773 [NAL9602](INFO): Packets left to send: 4
2018-09-23T05:27:50.775Z,1537680470.775 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0151.lzma.parts/0004.sbd
2018-09-23T05:28:03.688Z,1537680483.688 [NAL9602](INFO): SBD MO Status=1, MOMSN=1220, MT Status=0, MTMSN=0
2018-09-23T05:28:03.737Z,1537680483.737 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0151.lzma
2018-09-23T05:28:03.738Z,1537680483.738 [NAL9602](INFO): Packets left to send: 3
2018-09-23T05:28:03.739Z,1537680483.739 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0151.lzma.parts/0003.sbd
2018-09-23T05:28:19.036Z,1537680499.036 [NAL9602](INFO): SBD MO Status=1, MOMSN=1221, MT Status=0, MTMSN=0
2018-09-23T05:28:19.085Z,1537680499.085 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0151.lzma
2018-09-23T05:28:19.085Z,1537680499.085 [NAL9602](INFO): Packets left to send: 2
2018-09-23T05:28:19.086Z,1537680499.086 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0151.lzma.parts/0002.sbd
2018-09-23T05:28:31.312Z,1537680511.312 [NAL9602](INFO): SBD MO Status=1, MOMSN=1222, MT Status=0, MTMSN=0
2018-09-23T05:28:31.365Z,1537680511.365 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0151.lzma
2018-09-23T05:28:31.365Z,1537680511.365 [NAL9602](INFO): Packets left to send: 1
2018-09-23T05:28:31.367Z,1537680511.367 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0151.lzma.parts/0001.sbd
2018-09-23T05:28:34.265Z,1537680514.265 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:28:38.262Z,1537680518.262 [NAL9602](INFO): SBD MO Status=1, MOMSN=1223, MT Status=0, MTMSN=0
2018-09-23T05:28:38.313Z,1537680518.313 [NAL9602](INFO): Sent 11 bytes from file Logs/20180922T190757/Express0151.lzma
2018-09-23T05:28:38.313Z,1537680518.313 [NAL9602](INFO): Packets left to send: 0
2018-09-23T05:28:38.314Z,1537680518.314 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0151.lzma.parts/0000.sbd
2018-09-23T05:28:38.315Z,1537680518.315 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Express0151.lzma
2018-09-23T05:28:42.668Z,1537680522.668 [NAL9602](INFO): SBD MO Status=0, MOMSN=1224, MT Status=0, MTMSN=0
2018-09-23T05:29:00.004Z,1537680540.004 [NAL9602](INFO): SBD MO Status=1, MOMSN=1225, MT Status=0, MTMSN=0
2018-09-23T05:29:00.053Z,1537680540.053 [NAL9602](INFO): Sent 25 bytes from file Logs/20180922T190757/Courier0153.lzma
2018-09-23T05:29:00.053Z,1537680540.053 [NAL9602](INFO): Packets left to send: 0
2018-09-23T05:29:00.055Z,1537680540.055 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Courier0153.lzma.parts/0000.sbd
2018-09-23T05:29:00.055Z,1537680540.055 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Courier0153.lzma
2018-09-23T05:29:04.176Z,1537680544.176 [RDI_Pathfinder](ERROR): Failed to parse:

2018-09-23T05:29:09.372Z,1537680549.372 [NAL9602](INFO): SBD MO Status=1, MOMSN=1226, MT Status=0, MTMSN=0
2018-09-23T05:29:09.437Z,1537680549.437 [NAL9602](INFO): Sent 131 bytes from file Logs/20180922T190757/Express0154.lzma
2018-09-23T05:29:09.437Z,1537680549.437 [NAL9602](INFO): Packets left to send: 0
2018-09-23T05:29:09.439Z,1537680549.439 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0154.lzma.parts/0000.sbd
2018-09-23T05:29:09.439Z,1537680549.439 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Express0154.lzma
2018-09-23T05:29:25.768Z,1537680565.768 [NAL9602](INFO): SBD MO Status=0, MOMSN=1227, MT Status=0, MTMSN=0
2018-09-23T05:29:25.872Z,1537680565.872 [Default:CheckIn:Read_Iridium] Stopped
2018-09-23T05:29:25.872Z,1537680565.872 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-23T05:29:25.873Z,1537680565.873 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-23T05:29:56.558Z,1537680596.558 [NAL9602](INFO): Powering down
2018-09-23T05:30:33.756Z,1537680633.756 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:31:13.583Z,1537680673.583 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.002711
2018-09-23T05:31:27.618Z,1537680687.618 [RDI_Pathfinder](ERROR): only read 4 of 5 data items
2018-09-23T05:31:27.619Z,1537680687.619 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-327S,-32768,-32768,-32768,V
2018-09-23T05:34:26.472Z,1537680866.472 [Default:CheckIn:C.Wait](INFO): Done Waiting.
2018-09-23T05:34:26.472Z,1537680866.472 [Default:CheckIn:C.Wait] Stopped
2018-09-23T05:34:26.477Z,1537680866.477 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-23T05:34:26.477Z,1537680866.477 [Default:CheckIn:D] Running Loop=1
2018-09-23T05:34:26.875Z,1537680866.875 [Default:CheckIn:D] Stopped
2018-09-23T05:34:26.875Z,1537680866.875 [Default:CheckIn:E] Running Loop=1
2018-09-23T05:34:27.292Z,1537680867.292 [Default:CheckIn:E](IMPORTANT): Default mission has been running for 9.942566 min 
2018-09-23T05:34:27.292Z,1537680867.292 [Default:CheckIn:E] Stopped
2018-09-23T05:34:27.292Z,1537680867.292 [Default:CheckIn](INFO): Completed Default:CheckIn
2018-09-23T05:34:27.293Z,1537680867.293 [Default:CheckIn] Stopped
2018-09-23T05:34:27.293Z,1537680867.293 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-23T05:34:27.293Z,1537680867.293 [Default:CheckIn](INFO): Running loop #2
2018-09-23T05:34:27.293Z,1537680867.293 [Default:CheckIn] Running Loop=2
2018-09-23T05:34:27.293Z,1537680867.293 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-23T05:34:27.293Z,1537680867.293 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-23T05:34:28.030Z,1537680868.030 [NAL9602](INFO): Powering up
2018-09-23T05:34:39.230Z,1537680879.230 [NAL9602](INFO): NAL9602 initialized
2018-09-23T05:34:56.828Z,1537680896.828 [NAL9602](INFO): SBD MO Status=0, MOMSN=1228, MT Status=0, MTMSN=0
2018-09-23T05:34:56.828Z,1537680896.828 [NAL9602](INFO): No messages in MT queue
2018-09-23T05:36:31.294Z,1537680991.294 [NAL9602](INFO): GPS fix at 20180923T053620: (36.836152, -121.899198)
2018-09-23T05:36:31.344Z,1537680991.344 [Default:CheckIn:Read_GPS] Stopped
2018-09-23T05:36:31.344Z,1537680991.344 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-23T05:36:36.009Z,1537680996.009 [DataOverHttps](INFO): Sending 62 bytes from file Logs/20180922T190757/Courier0156.lzma
2018-09-23T05:36:37.982Z,1537680997.982 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0156.lzma.bak
2018-09-23T05:36:37.982Z,1537680997.982 [DataOverHttps](INFO): SBD MOMSN=8565138
2018-09-23T05:36:45.304Z,1537681005.304 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-23T05:36:45.304Z,1537681005.304 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-2768,V
2018-09-23T05:36:53.931Z,1537681013.931 [DataOverHttps](INFO): Sending 133 bytes from file Logs/20180922T190757/Express0157.lzma
2018-09-23T05:36:55.125Z,1537681015.125 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0157.lzma.bak
2018-09-23T05:36:55.126Z,1537681015.126 [DataOverHttps](INFO): SBD MOMSN=8565141
2018-09-23T05:36:55.632Z,1537681015.632 [Default:CheckIn:Read_Iridium] Stopped
2018-09-23T05:36:55.632Z,1537681015.632 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-23T05:36:55.632Z,1537681015.632 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-23T05:37:06.070Z,1537681026.070 [NAL9602](INFO): Powering down
2018-09-23T05:41:19.094Z,1537681279.094 [DataOverHttps](IMPORTANT): SBD MTMSN=20180923T054108
2018-09-23T05:41:30.874Z,1537681290.874 [DataOverHttps](INFO): Received command:load Science/trackPatch.xml;set trackPatch.MissionTimeout 30 min;set trackPatch.YoYoMinDepth 2 m;set trackPatch.YoYoMaxDepth 10 m;set trackPatch.PeakChlShallowBnd 3 m;set trackPatch.PeakChlDeepBnd 8 m;run
2018-09-23T05:41:30.890Z,1537681290.890 [CommandLine](IMPORTANT): got command load ./Missions/Science/trackPatch.xml
2018-09-23T05:41:30.890Z,1537681290.890 [MissionManager](INFO): Loading Mission: ./Missions/Science/trackPatch.xml
2018-09-23T05:41:31.116Z,1537681291.116 [MissionManager](INFO): DefineArg trackPatch.MinAltitude = 5.000000 m
2018-09-23T05:41:31.119Z,1537681291.119 [MissionManager](INFO): DefineArg trackPatch.MaxDepth = 65.000000 m
2018-09-23T05:41:31.121Z,1537681291.121 [MissionManager](INFO): DefineArg trackPatch.MinWaterDepth = 10.000000 m
2018-09-23T05:41:31.123Z,1537681291.123 [MissionManager](INFO): DefineArg trackPatch.MinOffshore = 2000.000000 m
2018-09-23T05:41:31.126Z,1537681291.126 [MissionManager](INFO): DefineArg trackPatch.NeedCommsTime = 180.000000 min
2018-09-23T05:41:31.128Z,1537681291.128 [MissionManager](INFO): DefineArg trackPatch.MissionTimeout = 56.000000 h
2018-09-23T05:41:31.130Z,1537681291.130 [MissionManager](INFO): DefineArg trackPatch.MassDefault = 0.000000 cm
2018-09-23T05:41:31.133Z,1537681291.133 [MissionManager](INFO): DefineArg trackPatch.BuoyancyNeutral = 205.000004 cc
2018-09-23T05:41:31.135Z,1537681291.135 [MissionManager](INFO): DefineArg trackPatch.YoYoMinDepth = 2.000000 m
2018-09-23T05:41:31.138Z,1537681291.138 [MissionManager](INFO): DefineArg trackPatch.YoYoMaxDepth = 10.000000 m
2018-09-23T05:41:31.140Z,1537681291.140 [MissionManager](INFO): DefineArg trackPatch.YoYoUpPitch = 20.000000 arcdeg
2018-09-23T05:41:31.142Z,1537681291.142 [MissionManager](INFO): DefineArg trackPatch.YoYoDownPitch = -20.000000 arcdeg
2018-09-23T05:41:31.144Z,1537681291.144 [MissionManager](INFO): DefineArg trackPatch.Speed = 1.000000 m/s
2018-09-23T05:41:31.147Z,1537681291.147 [MissionManager](INFO): DefineArg trackPatch.WpMaxDistance = 1000.000000 m
2018-09-23T05:41:31.149Z,1537681291.149 [MissionManager](INFO): DefineArg trackPatch.WpTimeout = 8000.000000 s
2018-09-23T05:41:31.151Z,1537681291.151 [MissionManager](INFO): DefineArg trackPatch.WaterFrame = 1 bool
2018-09-23T05:41:31.154Z,1537681291.154 [MissionManager](INFO): DefineArg trackPatch.Repeat = 20.000000 count
2018-09-23T05:41:31.156Z,1537681291.156 [MissionManager](INFO): DefineArg trackPatch.Turn = 90.000000 arcdeg
2018-09-23T05:41:31.183Z,1537681291.183 [MissionManager](INFO): DefineArg trackPatch.Reverse = 180.000000 arcdeg
2018-09-23T05:41:31.189Z,1537681291.189 [MissionManager](INFO): DefineArg trackPatch.TwoPi = 360.000000 arcdeg
2018-09-23T05:41:31.191Z,1537681291.191 [MissionManager](INFO): DefineArg trackPatch.LowPassWindowLen = 20.000000 count
2018-09-23T05:41:31.209Z,1537681291.209 [MissionManager](INFO): DefineArg trackPatch.PeakChlShallowBnd = 3.000000 m
2018-09-23T05:41:31.211Z,1537681291.211 [MissionManager](INFO): DefineArg trackPatch.PeakChlDeepBnd = 8.000000 m
2018-09-23T05:41:31.214Z,1537681291.214 [MissionManager](INFO): DefineArg trackPatch.FilterWidth = 4.000000 count
2018-09-23T05:41:31.216Z,1537681291.216 [MissionManager](INFO): DefineArg trackPatch.BeginThreshold = nan ug/l
2018-09-23T05:41:31.232Z,1537681291.232 [MissionManager](INFO): DefineArg trackPatch.OffPeakFraction = 80.000000 %
2018-09-23T05:41:31.234Z,1537681291.234 [MissionManager](INFO): DefineArg trackPatch.PatchMode = 0 bool
2018-09-23T05:41:31.236Z,1537681291.236 [MissionManager](INFO): DefineArg trackPatch.WpBearing = -90.000000 arcdeg
2018-09-23T05:41:31.238Z,1537681291.238 [MissionManager](INFO): DefineOutput trackPatch.PatchDetectOn = 0 bool
2018-09-23T05:41:31.240Z,1537681291.240 [MissionManager](INFO): DefineOutput trackPatch.WpDone = 0 bool
2018-09-23T05:41:31.257Z,1537681291.257 [MissionManager](INFO): DefineOutput trackPatch.PatchChl = nan ug/l
2018-09-23T05:41:31.259Z,1537681291.259 [MissionManager](INFO): DefineOutput trackPatch.PatchChlDepth = nan m
2018-09-23T05:41:31.261Z,1537681291.261 [MissionManager](INFO): DefineOutput trackPatch.PatchChlLatitude = nan arcdeg
2018-09-23T05:41:31.264Z,1537681291.264 [MissionManager](INFO): DefineOutput trackPatch.PatchChlLongitude = nan arcdeg
2018-09-23T05:41:31.282Z,1537681291.282 [MissionManager](INFO): DefineOutput trackPatch.PatchChlDistance = 0.000000 m
2018-09-23T05:41:31.283Z,1537681291.283 [trackPatch:A.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-23T05:41:31.288Z,1537681291.288 [trackPatch:B.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-23T05:41:31.313Z,1537681291.313 [MissionManager](INFO): Inserting Stack: Missions/Insert/Surface.xml
2018-09-23T05:41:31.381Z,1537681291.381 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.SurfaceDepthRate = nan m/s
2018-09-23T05:41:31.383Z,1537681291.383 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.SurfacePitch = 20.000000 arcdeg
2018-09-23T05:41:31.385Z,1537681291.385 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.SurfaceSpeed = 1.000000 m/s
2018-09-23T05:41:31.387Z,1537681291.387 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.IridiumTimeout = 30.000000 min
2018-09-23T05:41:31.404Z,1537681291.404 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.UnpackSplitAtSurface = 0 bool
2018-09-23T05:41:31.411Z,1537681291.411 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-23T05:41:31.474Z,1537681291.474 [MissionManager](INFO): RedefineArg trackPatch:SurfaceCommsSplit.SurfacePitch = value:20.000000 arcdeg
2018-09-23T05:41:31.476Z,1537681291.476 [MissionManager](INFO): RedefineArg trackPatch:SurfaceCommsSplit.SurfaceSpeed = value:1.000000 m/s
2018-09-23T05:41:31.478Z,1537681291.478 [MissionManager](INFO): RedefineArg trackPatch:SurfaceCommsSplit.UnpackSplitAtSurface = value:1 bool
2018-09-23T05:41:31.479Z,1537681291.479 [MissionManager](INFO): Inserting Stack: Missions/Insert/Surface.xml
2018-09-23T05:41:31.552Z,1537681291.552 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.SurfaceDepthRate = nan m/s
2018-09-23T05:41:31.554Z,1537681291.554 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.SurfacePitch = 20.000000 arcdeg
2018-09-23T05:41:31.556Z,1537681291.556 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.SurfaceSpeed = 1.000000 m/s
2018-09-23T05:41:31.575Z,1537681291.575 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.IridiumTimeout = 30.000000 min
2018-09-23T05:41:31.577Z,1537681291.577 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.UnpackSplitAtSurface = 0 bool
2018-09-23T05:41:31.578Z,1537681291.578 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-23T05:41:31.625Z,1537681291.625 [MissionManager](INFO): RedefineArg trackPatch:SurfaceComms:SurfaceComms.SurfacePitch = value:20.000000 arcdeg
2018-09-23T05:41:31.627Z,1537681291.627 [MissionManager](INFO): RedefineArg trackPatch:SurfaceComms:SurfaceComms.SurfaceSpeed = value:1.000000 m/s
2018-09-23T05:41:31.632Z,1537681291.632 [trackPatch:F.OffshoreEnvelope](DEBUG): Construct OffshoreEnvelope.
2018-09-23T05:41:31.653Z,1537681291.653 [trackPatch:G.WaterDepthEnvelope](DEBUG): Construct WaterDepthEnvelope.
2018-09-23T05:41:31.669Z,1537681291.669 [trackPatch:H.Pitch](DEBUG): Construct.
2018-09-23T05:41:31.673Z,1537681291.673 [trackPatch:I.Buoyancy](DEBUG): Construct Buoyancy.
2018-09-23T05:41:31.675Z,1537681291.675 [MissionManager](INFO): Inserting Stack: Missions/Insert/Science.xml
2018-09-23T05:41:31.827Z,1537681291.827 [MissionManager](INFO): DefineArg trackPatch:Science.SampleISUS = 0 bool
2018-09-23T05:41:31.829Z,1537681291.829 [MissionManager](INFO): DefineArg trackPatch:Science.SampleISUSmaxPitch = 60.000000 arcdeg
2018-09-23T05:41:31.832Z,1537681291.832 [MissionManager](INFO): DefineArg trackPatch:Science.SampleISUSminPitch = -60.000000 arcdeg
2018-09-23T05:41:31.836Z,1537681291.836 [MissionManager](INFO): DefineArg trackPatch:Science.PeakDetectChlActive = 0 bool
2018-09-23T05:41:31.840Z,1537681291.840 [MissionManager](INFO): DefineArg trackPatch:Science.HighestChlPeakReportActive = 0 bool
2018-09-23T05:41:31.844Z,1537681291.844 [MissionManager](INFO): DefineArg trackPatch:Science.PatchTracking = 1 bool
2018-09-23T05:41:31.848Z,1537681291.848 [MissionManager](INFO): DefineArg trackPatch:Science.FilterWidthHorizontal = 3.000000 count
2018-09-23T05:41:31.852Z,1537681291.852 [MissionManager](INFO): DefineArg trackPatch:Science.NumProfilesSlidingwindow = 100.000000 count
2018-09-23T05:41:31.857Z,1537681291.857 [MissionManager](INFO): DefineArg trackPatch:Science.OffPeakFractionHorizontal = 80.000000 %
2018-09-23T05:41:31.861Z,1537681291.861 [MissionManager](INFO): DefineArg trackPatch:Science.PeakDetectNO3Active = 0 bool
2018-09-23T05:41:31.864Z,1537681291.864 [MissionManager](INFO): DefineArg trackPatch:Science.PeakDetectOilActive = 0 bool
2018-09-23T05:41:31.900Z,1537681291.900 [MissionManager](INFO): DefineArg trackPatch:Science.UpwardDerivativeOfTemperatureActive = 0 bool
2018-09-23T05:41:31.902Z,1537681291.902 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledAanderaaO2 = 0.000000 bool
2018-09-23T05:41:31.905Z,1537681291.905 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledNeilBrown = 0.000000 bool
2018-09-23T05:41:31.907Z,1537681291.907 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledSeabird = 0.000000 bool
2018-09-23T05:41:31.920Z,1537681291.920 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledTurbulence_NPS = 0.000000 bool
2018-09-23T05:41:31.923Z,1537681291.923 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledWetLabsBB2FL = 0.000000 bool
2018-09-23T05:41:31.925Z,1537681291.925 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledWetLabsSeaOWL_UV_A = 1.000000 bool
2018-09-23T05:41:31.927Z,1537681291.927 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledISUS = 0.000000 bool
2018-09-23T05:41:31.945Z,1537681291.945 [MissionManager](INFO): DefineArg trackPatch:Science.LowPassWindowLength = 20.000000 count
2018-09-23T05:41:31.947Z,1537681291.947 [MissionManager](INFO): DefineArg trackPatch:Science.PeakChlShallowBound = 10.000000 m
2018-09-23T05:41:31.949Z,1537681291.949 [MissionManager](INFO): DefineArg trackPatch:Science.PeakChlDeepBound = 20.000000 m
2018-09-23T05:41:31.951Z,1537681291.951 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChl = 0.000000 ug/l
2018-09-23T05:41:31.969Z,1537681291.969 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlDepth = 0.000000 m
2018-09-23T05:41:31.972Z,1537681291.972 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlTemperature = 0.000000 degC
2018-09-23T05:41:31.974Z,1537681291.974 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlLatitude = nan arcdeg
2018-09-23T05:41:31.976Z,1537681291.976 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlLongitude = nan arcdeg
2018-09-23T05:41:31.995Z,1537681291.995 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3 = 0.000000 umol/l
2018-09-23T05:41:31.997Z,1537681291.997 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3Depth = 0.000000 m
2018-09-23T05:41:31.999Z,1537681291.999 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3Latitude = nan arcdeg
2018-09-23T05:41:32.016Z,1537681292.016 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3Longitude = nan arcdeg
2018-09-23T05:41:32.018Z,1537681292.018 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChl = 0.000000 m
2018-09-23T05:41:32.021Z,1537681292.021 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlDepth = 0.000000 m
2018-09-23T05:41:32.023Z,1537681292.023 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlLatitude = nan arcdeg
2018-09-23T05:41:32.041Z,1537681292.041 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlLongitude = nan arcdeg
2018-09-23T05:41:32.043Z,1537681292.043 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlDistance = nan m
2018-09-23T05:41:32.045Z,1537681292.045 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOil = 0.000000 kg/m3
2018-09-23T05:41:32.048Z,1537681292.048 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOilDepth = 0.000000 m
2018-09-23T05:41:32.066Z,1537681292.066 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOilLatitude = nan arcdeg
2018-09-23T05:41:32.068Z,1537681292.068 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOilLongitude = nan arcdeg
2018-09-23T05:41:32.116Z,1537681292.116 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-23T05:41:32.137Z,1537681292.137 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-23T05:41:32.165Z,1537681292.165 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-23T05:41:32.172Z,1537681292.172 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-23T05:41:32.190Z,1537681292.190 [MissionManager](INFO): RedefineArg trackPatch:Science.PeakDetectChlActive = value:1 bool
2018-09-23T05:41:32.191Z,1537681292.191 [MissionManager](INFO): RedefineArg trackPatch:Science.PatchTracking = value:1 bool
2018-09-23T05:41:32.192Z,1537681292.192 [MissionManager](INFO): RedefineArg trackPatch:Science.LowPassWindowLength = reader:trackPatch.LowPassWindowLen
2018-09-23T05:41:32.210Z,1537681292.210 [MissionManager](INFO): RedefineArg trackPatch:Science.PeakChlShallowBound = reader:trackPatch.PeakChlShallowBnd
2018-09-23T05:41:32.211Z,1537681292.211 [MissionManager](INFO): RedefineArg trackPatch:Science.PeakChlDeepBound = reader:trackPatch.PeakChlDeepBnd
2018-09-23T05:41:32.221Z,1537681292.221 [MissionManager](INFO): RedefineArg trackPatch:Science.OffPeakFractionHorizontal = reader:trackPatch.OffPeakFraction
2018-09-23T05:41:32.222Z,1537681292.222 [trackPatch:K.SetSpeed](DEBUG): Construct.
2018-09-23T05:41:32.224Z,1537681292.224 [trackPatch:L.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-23T05:41:32.240Z,1537681292.240 [trackPatch:M.YoYo](DEBUG): Construct YoYo.
2018-09-23T05:41:32.255Z,1537681292.255 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-23T05:41:32.288Z,1537681292.288 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-23T05:41:32.294Z,1537681292.294 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-23T05:41:32.317Z,1537681292.317 [trackPatch:PatchDetectHorizontal:InLegWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-23T05:41:32.330Z,1537681292.330 [trackPatch:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-23T05:41:32.378Z,1537681292.378 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Trigger="Tethys/Trigger" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Trigger http://okeanids.mbari.org/tethys/Xml/Trigger.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="trackPatch">

    <Description>
        Vehicle runs yo-yos, with patch detect enabled for cholorphyll
        concentration.
    </Description>

<!-- Vehicle safety parameters -->

    <DefineArg Name="MinAltitude"><Description>
        Minimum altitude for the entire mission.
    </Description><Units:meter/><Value>5</Value></DefineArg>

    <DefineArg Name="MaxDepth"><Description>
        Maximum depth for the entire mission.
    </Description><Units:meter/><Value>65</Value></DefineArg>

    <DefineArg Name="MinWaterDepth"><Description>
        Minimum water depth for the entire mission.
    </Description><Units:meter/><Value>10</Value></DefineArg>

    <DefineArg Name="MinOffshore"><Description>
        Minimum offshore distance for the entire mission.
    </Description><Units:meter/><Value>2000</Value></DefineArg>

    <DefineArg Name="NeedCommsTime"><Description>
        Maximum time between surfacings for communications
    </Description><Units:minute/><Value>180</Value></DefineArg>

    <DefineArg Name="MissionTimeout"><Description>
        Timeout for the entire mission
    </Description><Units:hour/><Value>56</Value></DefineArg>

    <DefineArg Name="MassDefault"><Description>
        Static setting for mass during the mission. Defaults to massDefault
        setting in the Config/Control.cfg file.
    </Description><Control:VerticalControl.massDefault/></DefineArg>

    <DefineArg Name="BuoyancyNeutral"><Description>
        Buoyancy bladder position while performing the YoYo behavior. Defaults
        to buoyancyNeutral setting in the Config/Control.cfg file.
    </Description><Control:VerticalControl.buoyancyNeutral/></DefineArg>

<!-- Basic guidance settings -->

    <DefineArg Name="YoYoMinDepth"><Description>
        Minimum depth during yo-yo's.
    </Description><Units:meter/><Value>2.0</Value></DefineArg>

    <DefineArg Name="YoYoMaxDepth"><Description>
        Maximum depth during yo-yo's.
    </Description><Units:meter/><Value>10.0</Value></DefineArg>

    <DefineArg Name="YoYoUpPitch"><Description>
        Pitch when yo-yo's are ascending.
    </Description><Units:degree/><Value>20.0</Value></DefineArg>

    <DefineArg Name="YoYoDownPitch"><Description>
        Pitch when yo-yo's are descending.
    </Description><Units:degree/><Value>-20.0</Value></DefineArg>

    <DefineArg Name="Speed"><Description>
        Vehicle speed.
    </Description><Units:meter_per_second/><Value>1</Value></DefineArg>

    <DefineArg Name="WpMaxDistance"><Description>
        Maximum length of each tracking leg
<!--debug
    </Description><Units:meter/><Value>7500</Value></DefineArg>
-->
    </Description><Units:meter/><Value>1000</Value></DefineArg>

    <DefineArg Name="WpTimeout"><Description>
        Maximum duration of each tracking leg
    </Description><Units:second/><Value>8000</Value></DefineArg>

    <DefineArg Name="WaterFrame"><Description>
        Set WaterFrame true to drive towards waypoints in the water frame of
        reference
    </Description><True/></DefineArg>

    <DefineArg Name="Repeat"><Description>
        Maximum number of tracking legs
    </Description><Units:count/><Value>20</Value></DefineArg>

<!-- Constant settings for each tracking leg -->

    <DefineArg Name="Turn"><Description>
        Amount to turn at each leg
    </Description><Units:degree/><Value>90</Value></DefineArg>

    <DefineArg Name="Reverse"><Description>
        Change in bearing which reverses vehicle direction
    </Description><Units:degree/><Value>180</Value></DefineArg>

    <DefineArg Name="TwoPi"><Description>
        Applied to stop run-up of angles
    </Description><Units:degree/><Value>360</Value></DefineArg>

    <DefineArg Name="LowPassWindowLen"><Description>
        Low-pass window length (based on depth sensor sampling interval 0.4
        second) for low-pass filtering.
    </Description><Units:count/><Value>20</Value></DefineArg>

    <DefineArg Name="PeakChlShallowBnd"><Description>
        Shallow depth bound for detecting chl peak on each descent or ascent
        profile.
<!--debug
    </Description><Units:meter/><Value>NaN</Value></DefineArg>
-->
    </Description><Units:meter/><Value>3</Value></DefineArg>

    <DefineArg Name="PeakChlDeepBnd"><Description>
        Deep depth bound for detecting chl peak on each descent or ascent
        profile.
<!--debug
    </Description><Units:meter/><Value>NaN</Value></DefineArg>
-->
    </Description><Units:meter/><Value>8</Value></DefineArg>

    <DefineArg Name="FilterWidth"><Description>
        Width of boxcar filter used in horizontal patch detection
    </Description><Units:count/><Value>4</Value></DefineArg>

    <DefineArg Name="BeginThreshold"><Description>
        If non-NaN, sets threshold for starting horizontal patch detection
    </Description><Units:microgram_per_liter/><Value>NaN</Value></DefineArg>

    <DefineArg Name="OffPeakFraction"><Description>
        When filtered horizontal value is this fraction of the peak, consider it
        outside the patch.
    </Description><Units:percent/><Value>80</Value></DefineArg>

    <DefineArg Name="PatchMode"><Description>
        If true, use center of "in peak" range as the turn-around point. If
        false use maximum horizontal peak location as the turn-around point.
    </Description><False/></DefineArg>

<!-- Variable Settings for each tracking leg -->

    <DefineArg Name="WpBearing"><Description>
        Bearing being followed in the current leg. Set this to initialize start
        direction of patch tracking.
    </Description><Units:degree/><Value>-90</Value></DefineArg>

    <DefineOutput Name="PatchDetectOn"><Description>
        Mission sets this to true when the patch has been crossed.
    </Description><False/></DefineOutput>

    <DefineOutput Name="WpDone"><Description>
        Mission sets this to true when the cross-patch waypoint has been
        reached.
    </Description><False/></DefineOutput>

    <DefineOutput Name="PatchChl"><Units:microgram_per_liter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlDepth"><Units:meter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlDistance"><Units:meter/><Value>0</Value></DefineOutput>

<!-- The timeout -->

    <Timeout Duration="MissionTimeout"/>

<!-- And now the mission -->

    <Guidance:AltitudeEnvelope>
        <Parallel/>
        <Setting><Guidance:AltitudeEnvelope.minAltitude/><Arg Name="MinAltitude"/></Setting>
    </Guidance:AltitudeEnvelope>

    <Guidance:DepthEnvelope>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="MaxDepth"/></Setting>
    </Guidance:DepthEnvelope>

    <Insert Filename="Insert/Surface.xml" Id="SurfaceCommsSplit">
        <RedefineArg Name="SurfacePitch"><Units:degree/><Value>20</Value></RedefineArg>
        <RedefineArg Name="SurfaceSpeed"><Units:meter_per_second/><Value>1</Value></RedefineArg>
        <RedefineArg Name="UnpackSplitAtSurface"><True/></RedefineArg>
    </Insert>

    <Aggregate Id="SurfaceComms">

        <When>
            <Called/>
        </When>

        <Insert Filename="Insert/Surface.xml">
            <RedefineArg Name="SurfacePitch"><Units:degree/><Value>20</Value></RedefineArg>
            <RedefineArg Name="SurfaceSpeed"><Units:meter_per_second/><Value>1</Value></RedefineArg>
        </Insert>

    </Aggregate>

<!-- GPS Update.  Don't go too long w/o a GPS fix. -->

    <Aggregate Id="NeedComms">

        <When>
            <Universal:platform_pitch_angle/>
            <Gt><Units:degree/><Value>0</Value></Gt>
            <And><Elapsed><Universal:time_fix/></Elapsed><Gt><Arg Name="NeedCommsTime"/></Gt></And>
            <Or><Elapsed><Universal:time_fix/></Elapsed><Gt><Arg Name="NeedCommsTime"/><Add><Units:minute/><Value>10</Value></Add></Gt></Or>
        </When>

        <Syslog Severity="Important">NeedComms Timeout Surfacing</Syslog>

        <Call RefId="SurfaceComms"/>

    </Aggregate>

    <Guidance:OffshoreEnvelope>
        <Parallel/>
        <Setting><Guidance:OffshoreEnvelope.minOffshore/><Arg Name="MinOffshore"/></Setting>
    </Guidance:OffshoreEnvelope>

    <Guidance:WaterDepthEnvelope>
        <Parallel/>
        <Setting><Guidance:WaterDepthEnvelope.minWaterDepth/><Arg Name="MinWaterDepth"/></Setting>
    </Guidance:WaterDepthEnvelope>

    <Guidance:Pitch>
        <Parallel/>
        <Setting><Guidance:Pitch.massPosition/><Arg Name="MassDefault"/></Setting>
    </Guidance:Pitch>

    <Guidance:Buoyancy>
        <Parallel/>
        <Setting><Guidance:Buoyancy.position /><Arg Name="BuoyancyNeutral"/></Setting>
    </Guidance:Buoyancy>

<!-- If we're executing here or below, lets' get science data! -->

    <Insert Filename="Insert/Science.xml">
        <RedefineArg Name="PeakDetectChlActive"><True/></RedefineArg>
        <RedefineArg Name="PatchTracking"><True/></RedefineArg>
        <RedefineArg Name="LowPassWindowLength"><Arg Name="LowPassWindowLen"/></RedefineArg>
        <RedefineArg Name="PeakChlShallowBound"><Arg Name="PeakChlShallowBnd"/></RedefineArg>
        <RedefineArg Name="PeakChlDeepBound"><Arg Name="PeakChlDeepBnd"/></RedefineArg>
        <RedefineArg Name="OffPeakFractionHorizontal"><Arg Name="OffPeakFraction"/></RedefineArg>
    </Insert>

    <Guidance:SetSpeed>
        <Parallel/>
        <Setting><Guidance:SetSpeed.speed/><Arg Name="Speed"/></Setting>
    </Guidance:SetSpeed>

    <Guidance:DepthEnvelope>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.minDepth/><Arg Name="YoYoMinDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="YoYoMaxDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:DepthEnvelope.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:DepthEnvelope>

    <Guidance:YoYo>
        <Parallel/>
        <Setting><Guidance:YoYo.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:YoYo.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:YoYo>

    <Aggregate Id="PatchDetectHorizontal">

        <Sequence Repeat="Repeat"/>

        <Aggregate Id="PatchDetection">

            <When>
                <Arg Name="PatchDetectOn"/>
            </When>

            <Trigger:PeakDetectHorizontal Id="PeakDetectHorizontalTrigger">
                <Sequence/>
<!--debug
                <Break><Arg Name="WpDone"/>
                </Break>
-->
                <Setting><Trigger:PeakDetectHorizontal.patchTracking/><Units:bool/><Value>1</Value></Setting>
                <Setting><Trigger:PeakDetectHorizontal.detectFrom/><Arg Name="Science:PeakChl"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.depthFrom/><Arg Name="Science:PeakChlDepth"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.latitudeFrom/><Arg Name="Science:PeakChlLatitude"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.longitudeFrom/><Arg Name="Science:PeakChlLongitude"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.beginThreshold/><Arg Name="BeginThreshold"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.offPeakFraction/><Arg Name="OffPeakFraction"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.filterWidth/><Arg Name="FilterWidth"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.centerPeak/><Arg Name="PatchMode"/></Setting>
                <OutputArg Name="PatchChl"><Trigger:PeakDetectHorizontal.peakDetect/></OutputArg>
                <OutputArg Name="PatchChlDepth"><Trigger:PeakDetectHorizontal.peakDepth/></OutputArg>
                <OutputArg Name="PatchChlLatitude"><Trigger:PeakDetectHorizontal.peakLatitude/></OutputArg>
                <OutputArg Name="PatchChlLongitude"><Trigger:PeakDetectHorizontal.peakLongitude/></OutputArg>
                <OutputArg Name="PatchChlDistance"><Trigger:PeakDetectHorizontal.peakDistance/></OutputArg>
            </Trigger:PeakDetectHorizontal>

            <Syslog Severity="Important">Fell below OffPeakFraction. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Arg Name="PatchChlDepth"/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog>

            <SendData Service="Express"><Arg Name="PatchChl"/><Arg Name="PatchChlDepth"/><Arg Name="PatchChlLatitude"/><Arg Name="PatchChlLongitude"/>
            </SendData>

            <Assign Id="AssignPatchDetectOff"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

        </Aggregate>

        <Assign Id="AssignPatchDetectOn"><Sequence/><Arg Name="PatchDetectOn"/><True/></Assign>

        <Syslog Severity="Important">Next: bearing for CrossLeg: <Arg Name="WpBearing"/><Units:degree/>. WpMaxDistance = <Arg Name="WpMaxDistance"/><Units:meter/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>.</Syslog>

        <Aggregate Id="CrossLeg">

            <Description>
                This is a long leg across the width of the patch. Also the first
                leg in a mission run. Two waypoints run in parallel: a short run
                to the surfacing point, and a longer run to the edge of the
                patch.
            </Description>

            <Sequence/>

            <Break><Arg Name="WpDone"/>
                <Or><Arg Name="PatchDetectOn"/><Eq><False/></Eq></Or>
            </Break>

            <Guidance:Waypoint Id="CrossSurfaceWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="PatchChlDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Call RefId="SurfaceComms"/>

            <Guidance:Waypoint Id="CrossPeakWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="WpMaxDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

<!--debug-->
            <Syslog Severity="Important">CrossPeakWp done. Lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Arg Name="PatchChlDepth"/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog> 

            <Assign Id="AssignPatchDetectOffInCrossLeg"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

            <Assign Id="AssignWpDoneInCrossLeg"><Sequence/><Arg Name="WpDone"/><True/></Assign>

        </Aggregate>

        <Assign Id="AssignWpBearingForInLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Add><Arg Name="Reverse"/></Add><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

        <Syslog Severity="Important">Next: bearing for InLeg: <Arg Name="WpBearing"/><Units:degree/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Arg Name="PatchChlDepth"/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog> 

        <Guidance:Waypoint Id="InLegWp">
            <Description>
                Simply drive back towards the patch center
            </Description>
            <Sequence/>
            <Timeout Duration="WpTimeout"/>
            <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="PatchChlDistance"/></Setting>
            <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
            <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
        </Guidance:Waypoint>

        <Assign Id="AssignWpBearingForOutLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Sub><Arg Name="Turn"/></Sub><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

        <Syslog Severity="Important">Next: bearing for OutLeg: <Arg Name="WpBearing"/><Units:degree/>. WpMaxDistance = <Arg Name="WpMaxDistance"/><Units:meter/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Arg Name="PatchChlDepth"/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog>

        <Call RefId="SurfaceCommsSplit"/>

        <Assign Id="AssignPatchDetectOnForOutLeg"><Sequence/><Arg Name="PatchDetectOn"/><True/></Assign>

        <Aggregate Id="OutLeg">

            <Description>
                Drive outward until edge of patch is detected.
            </Description>

            <Sequence/>

            <Break><Arg Name="WpDone"/>
                <Or><Arg Name="PatchDetectOn"/><Eq><False/></Eq></Or>
            </Break>

            <Guidance:Waypoint Id="OutLegWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="WpMaxDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Assign Id="AssignPatchDetectOffInOutLeg"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

            <Assign Id="AssignWpDoneInOutLeg"><Sequence/><Arg Name="WpDone"/><True/></Assign>

        </Aggregate>

        <Assign Id="AssignWpBearingForCrossLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Add><Arg Name="Reverse"/></Add><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

    </Aggregate>

</Mission>


2018-09-23T05:41:32.378Z,1537681292.378 [CommandLine](IMPORTANT): Loaded ./Missions/Science/trackPatch.xml
2018-09-23T05:41:43.831Z,1537681303.831 [CommandLine](IMPORTANT): got command set trackPatch.MissionTimeout 30.000000 minute
2018-09-23T05:41:43.832Z,1537681303.832 [CommandLine](IMPORTANT): got command set trackPatch.YoYoMinDepth 2.000000 meter
2018-09-23T05:41:43.833Z,1537681303.833 [CommandLine](IMPORTANT): got command set trackPatch.YoYoMaxDepth 10.000000 meter
2018-09-23T05:41:43.834Z,1537681303.834 [CommandLine](IMPORTANT): got command set trackPatch.PeakChlShallowBnd 3.000000 meter
2018-09-23T05:41:43.835Z,1537681303.835 [CommandLine](IMPORTANT): got command set trackPatch.PeakChlDeepBnd 8.000000 meter
2018-09-23T05:41:43.835Z,1537681303.835 [CommandLine](IMPORTANT): got command run
2018-09-23T05:41:43.839Z,1537681303.839 [CommandLine](IMPORTANT): Running 
2018-09-23T05:41:43.881Z,1537681303.881 [RDI_Pathfinder](ERROR): No DVL communication! Re-initializing
2018-09-23T05:41:43.881Z,1537681303.881 [RDI_Pathfinder] Communications Fault, FailCount= 1
2018-09-23T05:41:43.881Z,1537681303.881 [RDI_Pathfinder](ERROR): Communications Fault
2018-09-23T05:41:43.942Z,1537681303.942 [Default] Stopped
2018-09-23T05:41:43.942Z,1537681303.942 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-23T05:41:43.942Z,1537681303.942 [Default:B.GoToSurface] Stopped
2018-09-23T05:41:43.942Z,1537681303.942 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-23T05:41:43.942Z,1537681303.942 [Default:CheckIn] Stopped
2018-09-23T05:41:43.942Z,1537681303.942 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-23T05:41:43.942Z,1537681303.942 [Default:CheckIn:C.Wait] Stopped
2018-09-23T05:41:43.942Z,1537681303.942 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-23T05:41:43.943Z,1537681303.943 [MissionManager](IMPORTANT): Started mission trackPatch
2018-09-23T05:41:43.943Z,1537681303.943 [trackPatch] Running Loop=1
2018-09-23T05:41:43.943Z,1537681303.943 [trackPatch](DEBUG): Aggregate::initialize trackPatch
2018-09-23T05:41:43.943Z,1537681303.943 [trackPatch:A.AltitudeEnvelope] Running Loop=1
2018-09-23T05:41:43.943Z,1537681303.943 [trackPatch:A.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-23T05:41:43.943Z,1537681303.943 [trackPatch:B.DepthEnvelope] Running Loop=1
2018-09-23T05:41:43.943Z,1537681303.943 [trackPatch:B.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-23T05:41:43.944Z,1537681303.944 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-23T05:41:43.944Z,1537681303.944 [trackPatch:F.OffshoreEnvelope](DEBUG): Initialize OffshoreEnvelopeComponent.
2018-09-23T05:41:43.944Z,1537681303.944 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-23T05:41:43.944Z,1537681303.944 [trackPatch:G.WaterDepthEnvelope](DEBUG): Initialize WaterDepthEnvelopeComponent.
2018-09-23T05:41:43.944Z,1537681303.944 [trackPatch:H.Pitch] Running Loop=1
2018-09-23T05:41:43.944Z,1537681303.944 [trackPatch:H.Pitch](DEBUG): Initialize.
2018-09-23T05:41:43.944Z,1537681303.944 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-23T05:41:43.944Z,1537681303.944 [trackPatch:I.Buoyancy](DEBUG): Initialize Buoyancy Component.
2018-09-23T05:41:43.944Z,1537681303.944 [trackPatch:Science] Running Loop=1
2018-09-23T05:41:43.945Z,1537681303.945 [trackPatch:Science](DEBUG): Aggregate::initialize trackPatch:Science
2018-09-23T05:41:43.945Z,1537681303.945 [trackPatch:Science:A] Running Loop=1
2018-09-23T05:41:43.945Z,1537681303.945 [trackPatch:Science:B] Running Loop=1
2018-09-23T05:41:43.945Z,1537681303.945 [trackPatch:Science:C] Running Loop=1
2018-09-23T05:41:43.945Z,1537681303.945 [trackPatch:Science:D] Running Loop=1
2018-09-23T05:41:43.945Z,1537681303.945 [trackPatch:Science:E] Running Loop=1
2018-09-23T05:41:43.945Z,1537681303.945 [trackPatch:Science:F] Running Loop=1
2018-09-23T05:41:43.945Z,1537681303.945 [trackPatch:Science:G] Running Loop=1
2018-09-23T05:41:43.945Z,1537681303.945 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-23T05:41:43.945Z,1537681303.945 [trackPatch:Science:PeakDetectChl] Running Loop=1
2018-09-23T05:41:43.946Z,1537681303.946 [trackPatch:Science:PeakDetectChl](DEBUG): Aggregate::initialize trackPatch:Science:PeakDetectChl
2018-09-23T05:41:43.946Z,1537681303.946 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2018-09-23T05:41:43.946Z,1537681303.946 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-23T05:41:43.947Z,1537681303.947 [trackPatch:Science:HighestChlPeakReport] Running Loop=1
2018-09-23T05:41:43.947Z,1537681303.947 [trackPatch:Science:HighestChlPeakReport](DEBUG): Aggregate::initialize trackPatch:Science:HighestChlPeakReport
2018-09-23T05:41:43.947Z,1537681303.947 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2018-09-23T05:41:43.947Z,1537681303.947 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2018-09-23T05:41:43.948Z,1537681303.948 [trackPatch:Science:PeakDetectNO3] Running Loop=1
2018-09-23T05:41:43.948Z,1537681303.948 [trackPatch:Science:PeakDetectNO3](DEBUG): Aggregate::initialize trackPatch:Science:PeakDetectNO3
2018-09-23T05:41:43.948Z,1537681303.948 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2018-09-23T05:41:43.948Z,1537681303.948 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-23T05:41:43.949Z,1537681303.949 [trackPatch:Science:PeakDetectOil] Running Loop=1
2018-09-23T05:41:43.949Z,1537681303.949 [trackPatch:Science:PeakDetectOil](DEBUG): Aggregate::initialize trackPatch:Science:PeakDetectOil
2018-09-23T05:41:43.949Z,1537681303.949 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2018-09-23T05:41:43.950Z,1537681303.950 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-23T05:41:43.950Z,1537681303.950 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-23T05:41:43.951Z,1537681303.951 [trackPatch:K.SetSpeed](DEBUG): Initialize.
2018-09-23T05:41:43.951Z,1537681303.951 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-23T05:41:43.951Z,1537681303.951 [trackPatch:L.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-23T05:41:43.951Z,1537681303.951 [trackPatch:M.YoYo] Running Loop=1
2018-09-23T05:41:43.951Z,1537681303.951 [trackPatch:M.YoYo](DEBUG): Initialize YoYoComponent.
2018-09-23T05:41:43.951Z,1537681303.951 [trackPatch:SurfaceCommsSplit] Running Loop=1
2018-09-23T05:41:43.952Z,1537681303.952 [trackPatch:SurfaceCommsSplit](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit
2018-09-23T05:41:43.952Z,1537681303.952 [trackPatch:SurfaceCommsSplit:A.GoToSurface] Running Loop=1
2018-09-23T05:41:43.952Z,1537681303.952 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T05:41:43.952Z,1537681303.952 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-23T05:41:43.981Z,1537681303.981 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-23T05:41:43.981Z,1537681303.981 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-23T05:41:43.982Z,1537681303.982 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T05:41:43.982Z,1537681303.982 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T05:41:43.983Z,1537681303.983 [trackPatch:M.YoYo] Running Loop=1
2018-09-23T05:41:43.984Z,1537681303.984 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-23T05:41:43.986Z,1537681303.986 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-23T05:41:43.987Z,1537681303.987 [trackPatch:Science] Running Loop=1
2018-09-23T05:41:44.006Z,1537681304.006 [trackPatch:Science:PeakDetectOil] Stopped
2018-09-23T05:41:44.006Z,1537681304.006 [trackPatch:Science:PeakDetectOil](DEBUG): Aggregate::uninitialize trackPatch:Science:PeakDetectOil
2018-09-23T05:41:44.006Z,1537681304.006 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2018-09-23T05:41:44.006Z,1537681304.006 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-23T05:41:44.006Z,1537681304.006 [trackPatch:Science:PeakDetectNO3] Stopped
2018-09-23T05:41:44.006Z,1537681304.006 [trackPatch:Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize trackPatch:Science:PeakDetectNO3
2018-09-23T05:41:44.006Z,1537681304.006 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2018-09-23T05:41:44.006Z,1537681304.006 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-23T05:41:44.006Z,1537681304.006 [trackPatch:Science:HighestChlPeakReport] Stopped
2018-09-23T05:41:44.007Z,1537681304.007 [trackPatch:Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize trackPatch:Science:HighestChlPeakReport
2018-09-23T05:41:44.007Z,1537681304.007 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2018-09-23T05:41:44.007Z,1537681304.007 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-23T05:41:44.007Z,1537681304.007 [trackPatch:Science:PeakDetectChl] Running Loop=1
2018-09-23T05:41:44.008Z,1537681304.008 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-23T05:41:44.008Z,1537681304.008 [trackPatch:Science:Read_Oil](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-23T05:41:44.009Z,1537681304.009 [trackPatch:Science:G] Running Loop=1
2018-09-23T05:41:44.010Z,1537681304.010 [trackPatch:Science:G](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-23T05:41:44.011Z,1537681304.011 [trackPatch:Science:F] Stopped
2018-09-23T05:41:44.011Z,1537681304.011 [trackPatch:Science:E] Stopped
2018-09-23T05:41:44.011Z,1537681304.011 [trackPatch:Science:D] Stopped
2018-09-23T05:41:44.011Z,1537681304.011 [trackPatch:Science:C] Stopped
2018-09-23T05:41:44.011Z,1537681304.011 [trackPatch:Science:B] Stopped
2018-09-23T05:41:44.011Z,1537681304.011 [trackPatch:Science:A] Stopped
2018-09-23T05:41:44.011Z,1537681304.011 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-23T05:41:44.012Z,1537681304.012 [trackPatch:H.Pitch] Running Loop=1
2018-09-23T05:41:44.013Z,1537681304.013 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-23T05:41:44.014Z,1537681304.014 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-23T05:41:44.020Z,1537681304.020 [trackPatch:SurfaceCommsSplit:B] Running Loop=1
2018-09-23T05:41:44.020Z,1537681304.020 [trackPatch:SurfaceCommsSplit:B](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit:B
2018-09-23T05:41:44.020Z,1537681304.020 [trackPatch:SurfaceCommsSplit:B:A] Running Loop=1
2018-09-23T05:41:44.021Z,1537681304.021 [trackPatch:B.DepthEnvelope] Running Loop=1
2018-09-23T05:41:44.022Z,1537681304.022 [trackPatch:A.AltitudeEnvelope] Running Loop=1
2018-09-23T05:41:44.053Z,1537681304.053 [CBIT](ERROR): Communications Fault in component: RDI_Pathfinder
2018-09-23T05:41:44.089Z,1537681304.089 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-23T05:41:44.089Z,1537681304.089 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-23T05:41:44.185Z,1537681304.185 [RDI_Pathfinder](INFO): Powering down
2018-09-23T05:41:44.207Z,1537681304.207 [trackPatch:SurfaceCommsSplit:B:A](INFO): ##UnpackSplit##
2018-09-23T05:41:44.208Z,1537681304.208 [trackPatch:SurfaceCommsSplit:B:A] Stopped
2018-09-23T05:41:44.208Z,1537681304.208 [trackPatch:SurfaceCommsSplit:B](INFO): Completed trackPatch:SurfaceCommsSplit:B
2018-09-23T05:41:44.208Z,1537681304.208 [trackPatch:SurfaceCommsSplit:B] Stopped
2018-09-23T05:41:44.208Z,1537681304.208 [trackPatch:SurfaceCommsSplit:B](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit:B
2018-09-23T05:41:44.209Z,1537681304.209 [trackPatch:SurfaceCommsSplit:C] Running Loop=1
2018-09-23T05:41:44.209Z,1537681304.209 [trackPatch:SurfaceCommsSplit:C](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit:C
2018-09-23T05:41:44.209Z,1537681304.209 [trackPatch:SurfaceCommsSplit:C:A] Running Loop=1
2018-09-23T05:41:44.528Z,1537681304.528 [trackPatch:M.YoYo] Preempted
2018-09-23T05:41:44.528Z,1537681304.528 [trackPatch:L.DepthEnvelope] Preempted
2018-09-23T05:41:44.528Z,1537681304.528 [trackPatch:K.SetSpeed] Preempted
2018-09-23T05:41:44.528Z,1537681304.528 [trackPatch:Science] Preempted
2018-09-23T05:41:44.528Z,1537681304.528 [trackPatch:Science:G] Preempted
2018-09-23T05:41:44.528Z,1537681304.528 [trackPatch:Science:Read_Oil] Preempted
2018-09-23T05:41:44.529Z,1537681304.529 [trackPatch:Science:PeakDetectChl] Preempted
2018-09-23T05:41:44.533Z,1537681304.533 [trackPatch:I.Buoyancy] Preempted
2018-09-23T05:41:44.533Z,1537681304.533 [trackPatch:H.Pitch] Preempted
2018-09-23T05:41:44.533Z,1537681304.533 [trackPatch:G.WaterDepthEnvelope] Preempted
2018-09-23T05:41:44.533Z,1537681304.533 [trackPatch:F.OffshoreEnvelope] Preempted
2018-09-23T05:41:44.534Z,1537681304.534 [trackPatch:SurfaceCommsSplit:C:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-23T05:41:44.882Z,1537681304.882 [NAL9602](INFO): Powering up
2018-09-23T05:41:44.969Z,1537681304.969 [CBIT](INFO): Clearing failed state for component RDI_Pathfinder
2018-09-23T05:41:44.969Z,1537681304.969 [RDI_Pathfinder] No Fault, FailCount= 1
2018-09-23T05:41:46.257Z,1537681306.257 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-23T05:41:56.074Z,1537681316.074 [NAL9602](INFO): NAL9602 initialized
2018-09-23T05:41:58.498Z,1537681318.498 [RDI_Pathfinder](ERROR): Failed to parse:Pathfinder
2018-09-23T05:42:14.879Z,1537681334.879 [NAL9602](INFO): SBD MO Status=0, MOMSN=1229, MT Status=0, MTMSN=0
2018-09-23T05:42:14.879Z,1537681334.879 [NAL9602](INFO): No messages in MT queue
2018-09-23T05:42:43.283Z,1537681363.283 [NAL9602](INFO): GPS fix at 20180923T054232: (36.836554, -121.899325)
2018-09-23T05:42:43.358Z,1537681363.358 [trackPatch:SurfaceCommsSplit:C:A] Stopped
2018-09-23T05:42:43.359Z,1537681363.359 [trackPatch:SurfaceCommsSplit:C:B] Running Loop=1
2018-09-23T05:42:43.742Z,1537681363.742 [trackPatch:SurfaceCommsSplit:C:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-23T05:42:50.072Z,1537681370.072 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:43:15.678Z,1537681395.678 [NAL9602](INFO): Powering down
2018-09-23T05:43:20.472Z,1537681400.472 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:43:50.875Z,1537681430.875 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:44:06.242Z,1537681446.242 [DataOverHttps](INFO): Sending 62 bytes from file Logs/20180922T190757/Courier0159.lzma
2018-09-23T05:44:07.454Z,1537681447.454 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0159.lzma.bak
2018-09-23T05:44:07.454Z,1537681447.454 [DataOverHttps](INFO): SBD MOMSN=8565151
2018-09-23T05:44:27.766Z,1537681467.766 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180922T190757/Courier0162.lzma
2018-09-23T05:44:28.557Z,1537681468.557 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Courier0162.lzma.bak
2018-09-23T05:44:28.558Z,1537681468.558 [DataOverHttps](INFO): SBD MOMSN=8565154
2018-09-23T05:44:40.067Z,1537681480.067 [DataOverHttps](INFO): Sending 316 bytes from file Logs/20180922T190757/Express0160.lzma
2018-09-23T05:44:41.664Z,1537681481.664 [DataOverHttps](INFO): Moved sent file to Logs/20180922T190757/Express0160.lzma.bak
2018-09-23T05:44:41.664Z,1537681481.664 [DataOverHttps](INFO): SBD MOMSN=8565156
2018-09-23T05:45:48.747Z,1537681548.747 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:46:19.540Z,1537681579.540 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:46:50.340Z,1537681610.340 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:47:20.741Z,1537681640.741 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:47:48.340Z,1537681668.340 [DataOverHttps](INFO): setting unavailable, lastComms_.elapsed()=180.399765
2018-09-23T05:47:48.364Z,1537681668.364 [NAL9602](INFO): Powering up
2018-09-23T05:47:59.542Z,1537681679.542 [NAL9602](INFO): NAL9602 initialized
2018-09-23T05:48:17.307Z,1537681697.307 [NAL9602](INFO): SBD MO Status=1, MOMSN=1230, MT Status=0, MTMSN=0
2018-09-23T05:48:17.365Z,1537681697.365 [NAL9602](INFO): Sent 25 bytes from file Logs/20180922T190757/Express0163.lzma
2018-09-23T05:48:17.365Z,1537681697.365 [NAL9602](INFO): Packets left to send: 0
2018-09-23T05:48:17.367Z,1537681697.367 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0163.lzma.parts/0000.sbd
2018-09-23T05:48:17.367Z,1537681697.367 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Express0163.lzma
2018-09-23T05:48:18.900Z,1537681698.900 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:48:27.304Z,1537681707.304 [NAL9602](INFO): SBD MO Status=0, MOMSN=1231, MT Status=0, MTMSN=0
2018-09-23T05:48:27.409Z,1537681707.409 [trackPatch:SurfaceCommsSplit:C:B] Stopped
2018-09-23T05:48:27.409Z,1537681707.409 [trackPatch:SurfaceCommsSplit:C:C] Running Loop=1
2018-09-23T05:48:27.773Z,1537681707.773 [trackPatch:SurfaceCommsSplit:C:C](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-23T05:48:59.306Z,1537681739.306 [NAL9602](INFO): GPS fix at 20180923T054848: (36.836934, -121.899511)
2018-09-23T05:48:59.380Z,1537681739.380 [trackPatch:SurfaceCommsSplit:C:C] Stopped
2018-09-23T05:48:59.380Z,1537681739.380 [trackPatch:SurfaceCommsSplit:C](INFO): Completed trackPatch:SurfaceCommsSplit:C
2018-09-23T05:48:59.380Z,1537681739.380 [trackPatch:SurfaceCommsSplit:C] Stopped
2018-09-23T05:48:59.380Z,1537681739.380 [trackPatch:SurfaceCommsSplit:C](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit:C
2018-09-23T05:48:59.385Z,1537681739.385 [trackPatch:SurfaceCommsSplit](INFO): Completed trackPatch:SurfaceCommsSplit
2018-09-23T05:48:59.385Z,1537681739.385 [trackPatch:SurfaceCommsSplit] Stopped
2018-09-23T05:48:59.386Z,1537681739.386 [trackPatch:SurfaceCommsSplit](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit
2018-09-23T05:48:59.386Z,1537681739.386 [trackPatch:SurfaceCommsSplit:A.GoToSurface] Stopped
2018-09-23T05:48:59.386Z,1537681739.386 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-23T05:48:59.386Z,1537681739.386 [trackPatch:PatchDetectHorizontal] Running Loop=1
2018-09-23T05:48:59.386Z,1537681739.386 [trackPatch:PatchDetectHorizontal](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal
2018-09-23T05:48:59.386Z,1537681739.386 [trackPatch:PatchDetectHorizontal:AssignPatchDetectOn] Running Loop=1
2018-09-23T05:48:59.762Z,1537681739.762 [trackPatch:PatchDetectHorizontal:AssignPatchDetectOn] Stopped
2018-09-23T05:48:59.763Z,1537681739.763 [trackPatch:PatchDetectHorizontal:C] Running Loop=1
2018-09-23T05:48:59.763Z,1537681739.763 [trackPatch:M.YoYo] Running Loop=1
2018-09-23T05:48:59.763Z,1537681739.763 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-23T05:48:59.764Z,1537681739.764 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-23T05:48:59.764Z,1537681739.764 [trackPatch:Science] Running Loop=1
2018-09-23T05:48:59.767Z,1537681739.767 [trackPatch:Science:PeakDetectChl] Running Loop=1
2018-09-23T05:48:59.767Z,1537681739.767 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-23T05:48:59.767Z,1537681739.767 [trackPatch:Science:G] Running Loop=1
2018-09-23T05:48:59.767Z,1537681739.767 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-23T05:48:59.768Z,1537681739.768 [trackPatch:H.Pitch] Running Loop=1
2018-09-23T05:48:59.768Z,1537681739.768 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-23T05:48:59.785Z,1537681739.785 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-23T05:48:59.918Z,1537681739.918 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-23T05:48:59.918Z,1537681739.918 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-23T05:49:00.164Z,1537681740.164 [trackPatch:PatchDetectHorizontal:C](IMPORTANT): Next: bearing for CrossLeg: -90.000000 arcdeg . WpMaxDistance = 1000.000000 m . Current lat, lon = 36.836934 arcdeg , -121.899511 arcdeg .
2018-09-23T05:49:00.167Z,1537681740.167 [trackPatch:PatchDetectHorizontal:C] Stopped
2018-09-23T05:49:00.168Z,1537681740.168 [trackPatch:PatchDetectHorizontal:CrossLeg] Running Loop=1
2018-09-23T05:49:00.168Z,1537681740.168 [trackPatch:PatchDetectHorizontal:CrossLeg](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal:CrossLeg
2018-09-23T05:49:00.169Z,1537681740.169 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint] Running Loop=1
2018-09-23T05:49:00.169Z,1537681740.169 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-23T05:49:00.171Z,1537681740.171 [trackPatch:PatchDetectHorizontal:PatchDetection] Running Loop=1
2018-09-23T05:49:00.171Z,1537681740.171 [trackPatch:PatchDetectHorizontal:PatchDetection](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal:PatchDetection
2018-09-23T05:49:00.172Z,1537681740.172 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal] Running Loop=1
2018-09-23T05:49:00.173Z,1537681740.173 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](INFO): Initialize.
2018-09-23T05:49:00.561Z,1537681740.561 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint] Stopped
2018-09-23T05:49:00.561Z,1537681740.561 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-23T05:49:00.562Z,1537681740.562 [trackPatch:PatchDetectHorizontal:CrossLeg:B] Running Loop=1
2018-09-23T05:49:00.562Z,1537681740.562 [trackPatch:PatchDetectHorizontal:CrossLeg:B](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal:CrossLeg:B
2018-09-23T05:49:00.970Z,1537681740.970 [trackPatch:SurfaceComms] Running Loop=1
2018-09-23T05:49:00.970Z,1537681740.970 [trackPatch:SurfaceComms](DEBUG): Aggregate::initialize trackPatch:SurfaceComms
2018-09-23T05:49:00.970Z,1537681740.970 [trackPatch:SurfaceComms:SurfaceComms] Running Loop=1
2018-09-23T05:49:00.970Z,1537681740.970 [trackPatch:SurfaceComms:SurfaceComms](DEBUG): Aggregate::initialize trackPatch:SurfaceComms:SurfaceComms
2018-09-23T05:49:00.970Z,1537681740.970 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface] Running Loop=1
2018-09-23T05:49:00.970Z,1537681740.970 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T05:49:00.971Z,1537681740.971 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-23T05:49:00.971Z,1537681740.971 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-23T05:49:00.972Z,1537681740.972 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-23T05:49:00.972Z,1537681740.972 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T05:49:00.972Z,1537681740.972 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T05:49:00.980Z,1537681740.980 [trackPatch:SurfaceComms:SurfaceComms:B] Running Loop=1
2018-09-23T05:49:00.985Z,1537681740.985 [trackPatch:SurfaceComms:SurfaceComms:B](DEBUG): Aggregate::initialize trackPatch:SurfaceComms:SurfaceComms:B
2018-09-23T05:49:00.985Z,1537681740.985 [trackPatch:SurfaceComms:SurfaceComms:B:A] Running Loop=1
2018-09-23T05:49:01.379Z,1537681741.379 [trackPatch:SurfaceComms:SurfaceComms:B] Stopped
2018-09-23T05:49:01.379Z,1537681741.379 [trackPatch:SurfaceComms:SurfaceComms:B](DEBUG): Aggregate::uninitialize trackPatch:SurfaceComms:SurfaceComms:B
2018-09-23T05:49:01.379Z,1537681741.379 [trackPatch:SurfaceComms:SurfaceComms:B:A] Stopped
2018-09-23T05:49:01.379Z,1537681741.379 [trackPatch:SurfaceComms:SurfaceComms:C] Running Loop=1
2018-09-23T05:49:01.379Z,1537681741.379 [trackPatch:SurfaceComms:SurfaceComms:C](DEBUG): Aggregate::initialize trackPatch:SurfaceComms:SurfaceComms:C
2018-09-23T05:49:01.379Z,1537681741.379 [trackPatch:SurfaceComms:SurfaceComms:C:A] Running Loop=1
2018-09-23T05:49:01.755Z,1537681741.755 [trackPatch:M.YoYo] Preempted
2018-09-23T05:49:01.755Z,1537681741.755 [trackPatch:L.DepthEnvelope] Preempted
2018-09-23T05:49:01.755Z,1537681741.755 [trackPatch:K.SetSpeed] Preempted
2018-09-23T05:49:01.755Z,1537681741.755 [trackPatch:Science] Preempted
2018-09-23T05:49:01.755Z,1537681741.755 [trackPatch:Science:G] Preempted
2018-09-23T05:49:01.756Z,1537681741.756 [trackPatch:Science:Read_Oil] Preempted
2018-09-23T05:49:01.756Z,1537681741.756 [trackPatch:Science:PeakDetectChl] Preempted
2018-09-23T05:49:01.756Z,1537681741.756 [trackPatch:I.Buoyancy] Preempted
2018-09-23T05:49:01.756Z,1537681741.756 [trackPatch:H.Pitch] Preempted
2018-09-23T05:49:01.756Z,1537681741.756 [trackPatch:G.WaterDepthEnvelope] Preempted
2018-09-23T05:49:01.756Z,1537681741.756 [trackPatch:F.OffshoreEnvelope] Preempted
2018-09-23T05:49:01.757Z,1537681741.757 [trackPatch:SurfaceComms:SurfaceComms:C:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-23T05:49:02.085Z,1537681742.085 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-23T05:49:03.337Z,1537681743.337 [NAL9602](INFO): GPS fix at 20180923T054852: (36.836938, -121.899518)
2018-09-23T05:49:03.395Z,1537681743.395 [trackPatch:SurfaceComms:SurfaceComms:C:A] Stopped
2018-09-23T05:49:03.396Z,1537681743.396 [trackPatch:SurfaceComms:SurfaceComms:C:B] Running Loop=1
2018-09-23T05:49:03.776Z,1537681743.776 [trackPatch:SurfaceComms:SurfaceComms:C:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-23T05:49:19.072Z,1537681759.072 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:49:23.480Z,1537681763.480 [NAL9602](INFO): SBD MO Status=1, MOMSN=1232, MT Status=0, MTMSN=0
2018-09-23T05:49:23.533Z,1537681763.533 [NAL9602](INFO): Sent 62 bytes from file Logs/20180922T190757/Courier0165.lzma
2018-09-23T05:49:23.533Z,1537681763.533 [NAL9602](INFO): Packets left to send: 0
2018-09-23T05:49:23.535Z,1537681763.535 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Courier0165.lzma.parts/0000.sbd
2018-09-23T05:49:23.536Z,1537681763.536 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Courier0165.lzma
2018-09-23T05:49:32.396Z,1537681772.396 [NAL9602](INFO): SBD MO Status=1, MOMSN=1233, MT Status=0, MTMSN=0
2018-09-23T05:49:32.453Z,1537681772.453 [NAL9602](INFO): Sent 194 bytes from file Logs/20180922T190757/Express0166.lzma
2018-09-23T05:49:32.453Z,1537681772.453 [NAL9602](INFO): Packets left to send: 0
2018-09-23T05:49:32.456Z,1537681772.456 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0166.lzma.parts/0000.sbd
2018-09-23T05:49:32.462Z,1537681772.462 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Express0166.lzma
2018-09-23T05:49:38.804Z,1537681778.804 [NAL9602](INFO): SBD MO Status=0, MOMSN=1234, MT Status=0, MTMSN=0
2018-09-23T05:49:38.912Z,1537681778.912 [trackPatch:SurfaceComms:SurfaceComms:C:B] Stopped
2018-09-23T05:49:38.913Z,1537681778.913 [trackPatch:SurfaceComms:SurfaceComms:C:C] Running Loop=1
2018-09-23T05:49:39.273Z,1537681779.273 [trackPatch:SurfaceComms:SurfaceComms:C:C](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-23T05:49:41.206Z,1537681781.206 [NAL9602](INFO): GPS fix at 20180923T054930: (36.836982, -121.899541)
2018-09-23T05:49:41.276Z,1537681781.276 [trackPatch:SurfaceComms:SurfaceComms:C:C] Stopped
2018-09-23T05:49:41.276Z,1537681781.276 [trackPatch:SurfaceComms:SurfaceComms:C](INFO): Completed trackPatch:SurfaceComms:SurfaceComms:C
2018-09-23T05:49:41.276Z,1537681781.276 [trackPatch:SurfaceComms:SurfaceComms:C] Stopped
2018-09-23T05:49:41.276Z,1537681781.276 [trackPatch:SurfaceComms:SurfaceComms:C](DEBUG): Aggregate::uninitialize trackPatch:SurfaceComms:SurfaceComms:C
2018-09-23T05:49:41.282Z,1537681781.282 [trackPatch:SurfaceComms:SurfaceComms](INFO): Completed trackPatch:SurfaceComms:SurfaceComms
2018-09-23T05:49:41.282Z,1537681781.282 [trackPatch:SurfaceComms:SurfaceComms] Stopped
2018-09-23T05:49:41.282Z,1537681781.282 [trackPatch:SurfaceComms:SurfaceComms](DEBUG): Aggregate::uninitialize trackPatch:SurfaceComms:SurfaceComms
2018-09-23T05:49:41.282Z,1537681781.282 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface] Stopped
2018-09-23T05:49:41.282Z,1537681781.282 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-23T05:49:41.282Z,1537681781.282 [trackPatch:SurfaceComms](INFO): Completed trackPatch:SurfaceComms
2018-09-23T05:49:41.282Z,1537681781.282 [trackPatch:SurfaceComms] Stopped
2018-09-23T05:49:41.282Z,1537681781.282 [trackPatch:SurfaceComms](DEBUG): Aggregate::uninitialize trackPatch:SurfaceComms
2018-09-23T05:49:41.656Z,1537681781.656 [trackPatch:PatchDetectHorizontal:CrossLeg:B](INFO): Completed trackPatch:PatchDetectHorizontal:CrossLeg:B
2018-09-23T05:49:41.656Z,1537681781.656 [trackPatch:PatchDetectHorizontal:CrossLeg:B] Stopped
2018-09-23T05:49:41.656Z,1537681781.656 [trackPatch:PatchDetectHorizontal:CrossLeg:B](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal:CrossLeg:B
2018-09-23T05:49:41.657Z,1537681781.657 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint] Running Loop=1
2018-09-23T05:49:41.657Z,1537681781.657 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-23T05:49:41.658Z,1537681781.658 [trackPatch:M.YoYo] Running Loop=1
2018-09-23T05:49:41.659Z,1537681781.659 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-23T05:49:41.660Z,1537681781.660 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-23T05:49:41.660Z,1537681781.660 [trackPatch:Science] Running Loop=1
2018-09-23T05:49:41.662Z,1537681781.662 [trackPatch:Science:PeakDetectChl] Running Loop=1
2018-09-23T05:49:41.662Z,1537681781.662 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-23T05:49:41.663Z,1537681781.663 [trackPatch:Science:G] Running Loop=1
2018-09-23T05:49:41.663Z,1537681781.663 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-23T05:49:41.663Z,1537681781.663 [trackPatch:H.Pitch] Running Loop=1
2018-09-23T05:49:41.664Z,1537681781.664 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-23T05:49:41.664Z,1537681781.664 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-23T05:49:41.729Z,1537681781.729 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-23T05:49:41.730Z,1537681781.730 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-23T05:50:05.962Z,1537681805.962 [Radio_Surface](INFO): Powering down
2018-09-23T05:50:13.597Z,1537681813.597 [NAL9602](INFO): Powering down
2018-09-23T05:50:19.595Z,1537681819.595 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:51:19.592Z,1537681879.592 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:52:19.992Z,1537681939.992 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:53:20.005Z,1537682000.005 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:54:19.619Z,1537682059.619 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:55:20.018Z,1537682120.018 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:56:20.416Z,1537682180.416 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:57:20.839Z,1537682240.839 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:57:51.262Z,1537682271.262 [RDI_Pathfinder](ERROR): Failed to parse::SA,   +0.00,   +0.00,  0.00
2018-09-23T05:58:20.839Z,1537682300.839 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T05:59:21.236Z,1537682361.236 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T06:00:21.239Z,1537682421.239 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T06:01:21.243Z,1537682481.243 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T06:02:22.036Z,1537682542.036 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T06:03:22.038Z,1537682602.038 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T06:04:22.039Z,1537682662.039 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T06:05:22.040Z,1537682722.040 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T06:06:22.836Z,1537682782.836 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T06:06:23.304Z,1537682783.304 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint] Stopped
2018-09-23T06:06:23.304Z,1537682783.304 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-23T06:06:23.304Z,1537682783.304 [trackPatch:PatchDetectHorizontal:CrossLeg:D] Running Loop=1
2018-09-23T06:06:23.690Z,1537682783.690 [trackPatch:PatchDetectHorizontal:CrossLeg:D](IMPORTANT): CrossPeakWp done. Lat, lon = 36.837701 arcdeg , -121.909592 arcdeg . Patch value is nan ug/l at lat = nan arcdeg , lon = nan arcdeg , dep = nan m , distance = 0.000000 m 
2018-09-23T06:06:23.691Z,1537682783.691 [trackPatch:PatchDetectHorizontal:CrossLeg:D] Stopped
2018-09-23T06:06:23.691Z,1537682783.691 [trackPatch:PatchDetectHorizontal:CrossLeg:AssignPatchDetectOffInCrossLeg] Running Loop=1
2018-09-23T06:06:24.090Z,1537682784.090 [trackPatch:PatchDetectHorizontal:CrossLeg:AssignPatchDetectOffInCrossLeg] Stopped
2018-09-23T06:06:24.091Z,1537682784.091 [trackPatch:PatchDetectHorizontal:CrossLeg:AssignWpDoneInCrossLeg] Running Loop=1
2018-09-23T06:06:24.496Z,1537682784.496 [trackPatch:PatchDetectHorizontal:CrossLeg] Stopped
2018-09-23T06:06:24.496Z,1537682784.496 [trackPatch:PatchDetectHorizontal:CrossLeg](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal:CrossLeg
2018-09-23T06:06:24.496Z,1537682784.496 [trackPatch:PatchDetectHorizontal:CrossLeg:AssignWpDoneInCrossLeg] Stopped
2018-09-23T06:06:24.497Z,1537682784.497 [trackPatch:PatchDetectHorizontal:AssignWpBearingForInLeg] Running Loop=1
2018-09-23T06:06:24.901Z,1537682784.901 [trackPatch:PatchDetectHorizontal:AssignWpBearingForInLeg] Stopped
2018-09-23T06:06:24.901Z,1537682784.901 [trackPatch:PatchDetectHorizontal:F] Running Loop=1
2018-09-23T06:06:25.289Z,1537682785.289 [trackPatch:PatchDetectHorizontal:F](IMPORTANT): Next: bearing for InLeg: 90.000000 arcdeg . Current lat, lon = 36.837701 arcdeg , -121.909609 arcdeg . Patch value is nan ug/l at lat = nan arcdeg , lon = nan arcdeg , dep = nan m , distance = 0.000000 m 
2018-09-23T06:06:25.293Z,1537682785.293 [trackPatch:PatchDetectHorizontal:F] Stopped
2018-09-23T06:06:25.294Z,1537682785.294 [trackPatch:PatchDetectHorizontal:InLegWp.Waypoint] Running Loop=1
2018-09-23T06:06:25.294Z,1537682785.294 [trackPatch:PatchDetectHorizontal:InLegWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-23T06:06:25.708Z,1537682785.708 [trackPatch:PatchDetectHorizontal:InLegWp.Waypoint] Stopped
2018-09-23T06:06:25.708Z,1537682785.708 [trackPatch:PatchDetectHorizontal:InLegWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-23T06:06:25.708Z,1537682785.708 [trackPatch:PatchDetectHorizontal:AssignWpBearingForOutLeg] Running Loop=1
2018-09-23T06:06:26.080Z,1537682786.080 [trackPatch:PatchDetectHorizontal:AssignWpBearingForOutLeg] Stopped
2018-09-23T06:06:26.080Z,1537682786.080 [trackPatch:PatchDetectHorizontal:I] Running Loop=1
2018-09-23T06:06:26.487Z,1537682786.487 [trackPatch:PatchDetectHorizontal:I](IMPORTANT): Next: bearing for OutLeg: 0.000000 arcdeg . WpMaxDistance = 1000.000000 m . Current lat, lon = 36.837701 arcdeg , -121.909622 arcdeg . Patch value is nan ug/l at lat = nan arcdeg , lon = nan arcdeg , dep = nan m , distance = 0.000000 m 
2018-09-23T06:06:26.488Z,1537682786.488 [trackPatch:PatchDetectHorizontal:I] Stopped
2018-09-23T06:06:26.488Z,1537682786.488 [trackPatch:PatchDetectHorizontal:J] Running Loop=1
2018-09-23T06:06:26.501Z,1537682786.501 [trackPatch:PatchDetectHorizontal:J](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal:J
2018-09-23T06:06:26.915Z,1537682786.915 [trackPatch:SurfaceCommsSplit] Running Loop=1
2018-09-23T06:06:26.915Z,1537682786.915 [trackPatch:SurfaceCommsSplit](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit
2018-09-23T06:06:26.915Z,1537682786.915 [trackPatch:SurfaceCommsSplit:A.GoToSurface] Running Loop=1
2018-09-23T06:06:26.916Z,1537682786.916 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T06:06:26.916Z,1537682786.916 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-23T06:06:26.916Z,1537682786.916 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-23T06:06:26.921Z,1537682786.921 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-23T06:06:26.921Z,1537682786.921 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T06:06:26.922Z,1537682786.922 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T06:06:36.105Z,1537682796.105 [trackPatch:SurfaceCommsSplit:B] Running Loop=1
2018-09-23T06:06:36.105Z,1537682796.105 [trackPatch:SurfaceCommsSplit:B](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit:B
2018-09-23T06:06:36.106Z,1537682796.106 [trackPatch:SurfaceCommsSplit:B:A] Running Loop=1
2018-09-23T06:06:36.394Z,1537682796.394 [Radio_Surface](INFO): Powering up
2018-09-23T06:06:36.553Z,1537682796.553 [trackPatch:SurfaceCommsSplit:B:A](INFO): ##UnpackSplit##
2018-09-23T06:06:36.553Z,1537682796.553 [trackPatch:SurfaceCommsSplit:B:A] Stopped
2018-09-23T06:06:36.553Z,1537682796.553 [trackPatch:SurfaceCommsSplit:B](INFO): Completed trackPatch:SurfaceCommsSplit:B
2018-09-23T06:06:36.553Z,1537682796.553 [trackPatch:SurfaceCommsSplit:B] Stopped
2018-09-23T06:06:36.554Z,1537682796.554 [trackPatch:SurfaceCommsSplit:B](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit:B
2018-09-23T06:06:36.554Z,1537682796.554 [trackPatch:SurfaceCommsSplit:C] Running Loop=1
2018-09-23T06:06:36.554Z,1537682796.554 [trackPatch:SurfaceCommsSplit:C](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit:C
2018-09-23T06:06:36.554Z,1537682796.554 [trackPatch:SurfaceCommsSplit:C:A] Running Loop=1
2018-09-23T06:06:36.913Z,1537682796.913 [trackPatch:M.YoYo] Preempted
2018-09-23T06:06:36.914Z,1537682796.914 [trackPatch:L.DepthEnvelope] Preempted
2018-09-23T06:06:36.914Z,1537682796.914 [trackPatch:K.SetSpeed] Preempted
2018-09-23T06:06:36.914Z,1537682796.914 [trackPatch:Science] Preempted
2018-09-23T06:06:36.914Z,1537682796.914 [trackPatch:Science:G] Preempted
2018-09-23T06:06:36.914Z,1537682796.914 [trackPatch:Science:Read_Oil] Preempted
2018-09-23T06:06:36.914Z,1537682796.914 [trackPatch:Science:PeakDetectChl] Preempted
2018-09-23T06:06:36.914Z,1537682796.914 [trackPatch:I.Buoyancy] Preempted
2018-09-23T06:06:36.914Z,1537682796.914 [trackPatch:H.Pitch] Preempted
2018-09-23T06:06:36.914Z,1537682796.914 [trackPatch:G.WaterDepthEnvelope] Preempted
2018-09-23T06:06:36.914Z,1537682796.914 [trackPatch:F.OffshoreEnvelope] Preempted
2018-09-23T06:06:37.037Z,1537682797.037 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-23T06:06:37.238Z,1537682797.238 [NAL9602](INFO): Powering up
2018-09-23T06:06:46.433Z,1537682806.433 [BuoyancyServo](ERROR): getPosition uart error serial timeout
2018-09-23T06:06:46.433Z,1537682806.433 [BuoyancyServo](FAULT): Buoyancy getPosition uart error.serial timeout
2018-09-23T06:06:46.433Z,1537682806.433 [BuoyancyServo] Communications Fault, FailCount= 1
2018-09-23T06:06:46.433Z,1537682806.433 [BuoyancyServo](ERROR): Communications Fault
2018-09-23T06:06:46.439Z,1537682806.439 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-09-23T06:06:46.566Z,1537682806.566 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-23T06:06:46.567Z,1537682806.567 [BuoyancyServo](INFO): Powering down
2018-09-23T06:06:48.058Z,1537682808.058 [NAL9602](INFO): NAL9602 initialized
2018-09-23T06:06:48.123Z,1537682808.123 [BuoyancyServo](FAULT): LCB fault:  Current Limiter Activated.
2018-09-23T06:06:48.123Z,1537682808.123 [BuoyancyServo] Hardware Fault, FailCount= 1
2018-09-23T06:06:48.123Z,1537682808.123 [BuoyancyServo](ERROR): Hardware Fault
2018-09-23T06:06:48.548Z,1537682808.548 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-23T06:06:48.548Z,1537682808.548 [BuoyancyServo] No Fault, FailCount= 1
2018-09-23T06:06:48.941Z,1537682808.941 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-23T06:06:49.062Z,1537682809.062 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-23T06:07:22.456Z,1537682842.456 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T06:07:24.060Z,1537682844.060 [NAL9602](INFO): SBD MO Status=2, MOMSN=1235, MT Status=2, MTMSN=0
2018-09-23T06:07:24.060Z,1537682844.060 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-23T06:07:34.460Z,1537682854.460 [NAL9602](INFO): SBD MO Status=0, MOMSN=1235, MT Status=0, MTMSN=0
2018-09-23T06:07:34.460Z,1537682854.460 [NAL9602](INFO): No messages in MT queue
2018-09-23T06:08:11.263Z,1537682891.263 [NAL9602](INFO): GPS fix at 20180923T060800: (36.838555, -121.910139)
2018-09-23T06:08:11.340Z,1537682891.340 [UniversalFixResidualReporter](INFO): Fix residual: 10.4 %DT, over the last 967.2 m. Residual distance 101.0 m at bearing 158.8 degrees. Fix at (36.8386, -121.9101) with 959.2 m made good.
2018-09-23T06:08:11.346Z,1537682891.346 [trackPatch:SurfaceCommsSplit:C:A] Stopped
2018-09-23T06:08:11.346Z,1537682891.346 [trackPatch:SurfaceCommsSplit:C:B] Running Loop=1
2018-09-23T06:08:22.603Z,1537682902.603 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T06:08:25.012Z,1537682905.012 [NAL9602](INFO): SBD MO Status=1, MOMSN=1236, MT Status=0, MTMSN=0
2018-09-23T06:08:25.069Z,1537682905.069 [NAL9602](INFO): Sent 73 bytes from file Logs/20180922T190757/Courier0168.lzma
2018-09-23T06:08:25.069Z,1537682905.069 [NAL9602](INFO): Packets left to send: 0
2018-09-23T06:08:25.071Z,1537682905.071 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Courier0168.lzma.parts/0000.sbd
2018-09-23T06:08:25.071Z,1537682905.071 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Courier0168.lzma
2018-09-23T06:08:41.584Z,1537682921.584 [NAL9602](INFO): SBD MO Status=2, MOMSN=1237, MT Status=2, MTMSN=0
2018-09-23T06:08:41.584Z,1537682921.584 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-23T06:09:00.162Z,1537682940.162 [NAL9602](INFO): SBD MO Status=1, MOMSN=1237, MT Status=0, MTMSN=0
2018-09-23T06:09:00.225Z,1537682940.225 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0169.lzma
2018-09-23T06:09:00.225Z,1537682940.225 [NAL9602](INFO): Packets left to send: 2
2018-09-23T06:09:00.227Z,1537682940.227 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0169.lzma.parts/0002.sbd
2018-09-23T06:09:11.134Z,1537682951.134 [NAL9602](INFO): SBD MO Status=1, MOMSN=1238, MT Status=0, MTMSN=0
2018-09-23T06:09:11.189Z,1537682951.189 [NAL9602](INFO): Sent 332 bytes from file Logs/20180922T190757/Express0169.lzma
2018-09-23T06:09:11.189Z,1537682951.189 [NAL9602](INFO): Packets left to send: 1
2018-09-23T06:09:11.191Z,1537682951.191 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0169.lzma.parts/0001.sbd
2018-09-23T06:09:22.844Z,1537682962.844 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T06:09:23.248Z,1537682963.248 [NAL9602](INFO): SBD MO Status=1, MOMSN=1239, MT Status=0, MTMSN=0
2018-09-23T06:09:23.297Z,1537682963.297 [NAL9602](INFO): Sent 184 bytes from file Logs/20180922T190757/Express0169.lzma
2018-09-23T06:09:23.297Z,1537682963.297 [NAL9602](INFO): Packets left to send: 0
2018-09-23T06:09:23.298Z,1537682963.298 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0169.lzma.parts/0000.sbd
2018-09-23T06:09:23.299Z,1537682963.299 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Express0169.lzma
2018-09-23T06:09:52.856Z,1537682992.856 [NAL9602](INFO): SBD MO Status=2, MOMSN=1240, MT Status=2, MTMSN=0
2018-09-23T06:09:52.857Z,1537682992.857 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-23T06:10:12.056Z,1537683012.056 [NAL9602](INFO): SBD MO Status=2, MOMSN=1240, MT Status=2, MTMSN=0
2018-09-23T06:10:12.056Z,1537683012.056 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-23T06:10:22.059Z,1537683022.059 [NAL9602](INFO): SBD MO Status=0, MOMSN=1240, MT Status=0, MTMSN=0
2018-09-23T06:10:22.191Z,1537683022.191 [trackPatch:SurfaceCommsSplit:C:B] Stopped
2018-09-23T06:10:22.191Z,1537683022.191 [trackPatch:SurfaceCommsSplit:C:C] Running Loop=1
2018-09-23T06:10:22.844Z,1537683022.844 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T06:10:24.450Z,1537683024.450 [NAL9602](INFO): GPS fix at 20180923T061013: (36.838710, -121.910207)
2018-09-23T06:10:24.530Z,1537683024.530 [trackPatch:SurfaceCommsSplit:C:C] Stopped
2018-09-23T06:10:24.530Z,1537683024.530 [trackPatch:SurfaceCommsSplit:C](INFO): Completed trackPatch:SurfaceCommsSplit:C
2018-09-23T06:10:24.530Z,1537683024.530 [trackPatch:SurfaceCommsSplit:C] Stopped
2018-09-23T06:10:24.530Z,1537683024.530 [trackPatch:SurfaceCommsSplit:C](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit:C
2018-09-23T06:10:24.531Z,1537683024.531 [trackPatch:SurfaceCommsSplit](INFO): Completed trackPatch:SurfaceCommsSplit
2018-09-23T06:10:24.531Z,1537683024.531 [trackPatch:SurfaceCommsSplit] Stopped
2018-09-23T06:10:24.531Z,1537683024.531 [trackPatch:SurfaceCommsSplit](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit
2018-09-23T06:10:24.532Z,1537683024.532 [trackPatch:SurfaceCommsSplit:A.GoToSurface] Stopped
2018-09-23T06:10:24.532Z,1537683024.532 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-23T06:10:24.913Z,1537683024.913 [trackPatch:PatchDetectHorizontal:J](INFO): Completed trackPatch:PatchDetectHorizontal:J
2018-09-23T06:10:24.913Z,1537683024.913 [trackPatch:PatchDetectHorizontal:J] Stopped
2018-09-23T06:10:24.913Z,1537683024.913 [trackPatch:PatchDetectHorizontal:J](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal:J
2018-09-23T06:10:24.913Z,1537683024.913 [trackPatch:PatchDetectHorizontal:AssignPatchDetectOnForOutLeg] Running Loop=1
2018-09-23T06:10:24.914Z,1537683024.914 [trackPatch:M.YoYo] Running Loop=1
2018-09-23T06:10:24.914Z,1537683024.914 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-23T06:10:24.915Z,1537683024.915 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-23T06:10:24.915Z,1537683024.915 [trackPatch:Science] Running Loop=1
2018-09-23T06:10:24.917Z,1537683024.917 [trackPatch:Science:PeakDetectChl] Running Loop=1
2018-09-23T06:10:24.918Z,1537683024.918 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-23T06:10:24.918Z,1537683024.918 [trackPatch:Science:G] Running Loop=1
2018-09-23T06:10:24.918Z,1537683024.918 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-23T06:10:24.919Z,1537683024.919 [trackPatch:H.Pitch] Running Loop=1
2018-09-23T06:10:24.919Z,1537683024.919 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-23T06:10:24.919Z,1537683024.919 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-23T06:10:25.086Z,1537683025.086 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-23T06:10:25.086Z,1537683025.086 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-23T06:10:25.288Z,1537683025.288 [ElevatorOffsetCalculator](INFO): Removing expired estimator for commanded vars: speed 1.00 m/s, pitch 30.00 deg, mass-position -22.00 mm.
2018-09-23T06:10:25.351Z,1537683025.351 [trackPatch:PatchDetectHorizontal:AssignPatchDetectOnForOutLeg] Stopped
2018-09-23T06:10:25.351Z,1537683025.351 [trackPatch:PatchDetectHorizontal:OutLeg] Running Loop=1
2018-09-23T06:10:25.351Z,1537683025.351 [trackPatch:PatchDetectHorizontal:OutLeg](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal:OutLeg
2018-09-23T06:10:25.351Z,1537683025.351 [trackPatch:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint] Running Loop=1
2018-09-23T06:10:25.351Z,1537683025.351 [trackPatch:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-23T06:10:40.970Z,1537683040.970 [Radio_Surface](INFO): Powering down
2018-09-23T06:10:56.855Z,1537683056.855 [NAL9602](INFO): Powering down
2018-09-23T06:11:23.246Z,1537683083.246 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T06:11:44.109Z,1537683104.109 [trackPatch](INFO): Timed out from 2018-09-23T05:41:43.9Z
2018-09-23T06:11:44.109Z,1537683104.109 [MissionManager](INFO): trackPatch is completed.
2018-09-23T06:11:44.110Z,1537683104.110 [MissionManager](INFO): Uninitializing Mission trackPatch
2018-09-23T06:11:44.110Z,1537683104.110 [trackPatch] Stopped
2018-09-23T06:11:44.110Z,1537683104.110 [trackPatch](DEBUG): Aggregate::uninitialize trackPatch
2018-09-23T06:11:44.110Z,1537683104.110 [trackPatch:A.AltitudeEnvelope] Stopped
2018-09-23T06:11:44.110Z,1537683104.110 [trackPatch:A.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-23T06:11:44.110Z,1537683104.110 [trackPatch:B.DepthEnvelope] Stopped
2018-09-23T06:11:44.110Z,1537683104.110 [trackPatch:B.DepthEnvelope](DEBUG): Uninitialize.
2018-09-23T06:11:44.110Z,1537683104.110 [trackPatch:F.OffshoreEnvelope] Stopped
2018-09-23T06:11:44.110Z,1537683104.110 [trackPatch:F.OffshoreEnvelope](DEBUG): Uninitialize OffshoreEnvelopeComponent.
2018-09-23T06:11:44.110Z,1537683104.110 [trackPatch:G.WaterDepthEnvelope] Stopped
2018-09-23T06:11:44.110Z,1537683104.110 [trackPatch:G.WaterDepthEnvelope](DEBUG): Uninitialize WaterDepthEnvelopeComponent.
2018-09-23T06:11:44.111Z,1537683104.111 [trackPatch:H.Pitch] Stopped
2018-09-23T06:11:44.111Z,1537683104.111 [trackPatch:I.Buoyancy] Stopped
2018-09-23T06:11:44.111Z,1537683104.111 [trackPatch:I.Buoyancy](DEBUG): Uninitialize Buoyancy Component.
2018-09-23T06:11:44.111Z,1537683104.111 [trackPatch:Science] Stopped
2018-09-23T06:11:44.111Z,1537683104.111 [trackPatch:Science](DEBUG): Aggregate::uninitialize trackPatch:Science
2018-09-23T06:11:44.111Z,1537683104.111 [trackPatch:Science:G] Stopped
2018-09-23T06:11:44.111Z,1537683104.111 [trackPatch:Science:Read_Oil] Stopped
2018-09-23T06:11:44.111Z,1537683104.111 [trackPatch:Science:PeakDetectChl] Stopped
2018-09-23T06:11:44.111Z,1537683104.111 [trackPatch:Science:PeakDetectChl](DEBUG): Aggregate::uninitialize trackPatch:Science:PeakDetectChl
2018-09-23T06:11:44.111Z,1537683104.111 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2018-09-23T06:11:44.111Z,1537683104.111 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-23T06:11:44.112Z,1537683104.112 [trackPatch:K.SetSpeed] Stopped
2018-09-23T06:11:44.112Z,1537683104.112 [trackPatch:K.SetSpeed](DEBUG): Uninitialize.
2018-09-23T06:11:44.112Z,1537683104.112 [trackPatch:L.DepthEnvelope] Stopped
2018-09-23T06:11:44.112Z,1537683104.112 [trackPatch:L.DepthEnvelope](DEBUG): Uninitialize.
2018-09-23T06:11:44.112Z,1537683104.112 [trackPatch:M.YoYo] Stopped
2018-09-23T06:11:44.112Z,1537683104.112 [trackPatch:M.YoYo](DEBUG): Uninitialize YoYoComponent.
2018-09-23T06:11:44.112Z,1537683104.112 [trackPatch:PatchDetectHorizontal] Stopped
2018-09-23T06:11:44.112Z,1537683104.112 [trackPatch:PatchDetectHorizontal](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal
2018-09-23T06:11:44.112Z,1537683104.112 [trackPatch:PatchDetectHorizontal:PatchDetection] Stopped
2018-09-23T06:11:44.112Z,1537683104.112 [trackPatch:PatchDetectHorizontal:PatchDetection](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal:PatchDetection
2018-09-23T06:11:44.113Z,1537683104.113 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal] Stopped
2018-09-23T06:11:44.117Z,1537683104.117 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-23T06:11:44.117Z,1537683104.117 [trackPatch:PatchDetectHorizontal:OutLeg] Stopped
2018-09-23T06:11:44.117Z,1537683104.117 [trackPatch:PatchDetectHorizontal:OutLeg](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal:OutLeg
2018-09-23T06:11:44.117Z,1537683104.117 [trackPatch:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint] Stopped
2018-09-23T06:11:44.117Z,1537683104.117 [trackPatch:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-23T06:11:44.465Z,1537683104.465 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-23T06:11:44.525Z,1537683104.525 [MissionManager](IMPORTANT): Started mission Default
2018-09-23T06:11:44.525Z,1537683104.525 [Default] Running Loop=1
2018-09-23T06:11:44.525Z,1537683104.525 [Default](DEBUG): Aggregate::initialize Default
2018-09-23T06:11:44.525Z,1537683104.525 [Default:B.GoToSurface] Running Loop=1
2018-09-23T06:11:44.525Z,1537683104.525 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T06:11:44.526Z,1537683104.526 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-23T06:11:44.526Z,1537683104.526 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-23T06:11:44.526Z,1537683104.526 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-23T06:11:44.527Z,1537683104.527 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T06:11:44.527Z,1537683104.527 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T06:11:44.528Z,1537683104.528 [Default:A.Wait] Running Loop=1
2018-09-23T06:11:44.528Z,1537683104.528 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-23T06:11:44.886Z,1537683104.886 [ElevatorOffsetCalculator](INFO): New estimator for commanded vars: speed 1.00 m/s, pitch 30.00 deg, mass-position -22.00 mm (3 active estimators).
2018-09-23T06:11:57.539Z,1537683117.539 [Default:A.Wait](INFO): Done Waiting.
2018-09-23T06:11:57.539Z,1537683117.539 [Default:A.Wait] Stopped
2018-09-23T06:11:57.539Z,1537683117.539 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-23T06:11:58.710Z,1537683118.710 [Default:CheckIn] Running Loop=1
2018-09-23T06:11:58.710Z,1537683118.710 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-23T06:11:58.710Z,1537683118.710 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-23T06:11:59.002Z,1537683119.002 [Radio_Surface](INFO): Powering up
2018-09-23T06:11:59.457Z,1537683119.457 [NAL9602](INFO): Powering up
2018-09-23T06:12:10.654Z,1537683130.654 [NAL9602](INFO): NAL9602 initialized
2018-09-23T06:12:23.454Z,1537683143.454 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T06:12:56.663Z,1537683176.663 [NAL9602](INFO): SBD MO Status=2, MOMSN=1241, MT Status=2, MTMSN=0
2018-09-23T06:12:56.664Z,1537683176.664 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-23T06:13:15.456Z,1537683195.456 [NAL9602](INFO): SBD MO Status=0, MOMSN=1241, MT Status=0, MTMSN=0
2018-09-23T06:13:15.456Z,1537683195.456 [NAL9602](INFO): No messages in MT queue
2018-09-23T06:13:16.672Z,1537683196.672 [NAL9602](INFO): GPS fix at 20180923T061305: (36.839686, -121.910395)
2018-09-23T06:13:16.742Z,1537683196.742 [Default:CheckIn:Read_GPS] Stopped
2018-09-23T06:13:16.742Z,1537683196.742 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-23T06:13:24.032Z,1537683204.032 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T06:13:34.044Z,1537683214.044 [NAL9602](INFO): SBD MO Status=1, MOMSN=1242, MT Status=0, MTMSN=0
2018-09-23T06:13:34.097Z,1537683214.097 [NAL9602](INFO): Sent 64 bytes from file Logs/20180922T190757/Courier0171.lzma
2018-09-23T06:13:34.097Z,1537683214.097 [NAL9602](INFO): Packets left to send: 0
2018-09-23T06:13:34.099Z,1537683214.099 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Courier0171.lzma.parts/0000.sbd
2018-09-23T06:13:34.100Z,1537683214.100 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Courier0171.lzma
2018-09-23T06:13:58.588Z,1537683238.588 [NAL9602](INFO): SBD MO Status=1, MOMSN=1243, MT Status=0, MTMSN=0
2018-09-23T06:13:58.637Z,1537683238.637 [NAL9602](INFO): Sent 206 bytes from file Logs/20180922T190757/Express0172.lzma
2018-09-23T06:13:58.638Z,1537683238.638 [NAL9602](INFO): Packets left to send: 0
2018-09-23T06:13:58.640Z,1537683238.640 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180922T190757/Express0172.lzma.parts/0000.sbd
2018-09-23T06:13:58.641Z,1537683238.641 [NAL9602](DEBUG): Completed sending Logs/20180922T190757/Express0172.lzma
2018-09-23T06:14:20.580Z,1537683260.580 [NAL9602](INFO): SBD MO Status=2, MOMSN=1244, MT Status=2, MTMSN=0
2018-09-23T06:14:20.580Z,1537683260.580 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-23T06:14:24.576Z,1537683264.576 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T06:14:29.784Z,1537683269.784 [NAL9602](INFO): SBD MO Status=0, MOMSN=1244, MT Status=0, MTMSN=0
2018-09-23T06:14:29.888Z,1537683269.888 [Default:CheckIn:Read_Iridium] Stopped
2018-09-23T06:14:29.889Z,1537683269.889 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-23T06:14:29.889Z,1537683269.889 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-23T06:15:00.198Z,1537683300.198 [NAL9602](INFO): Powering down
2018-09-23T06:15:24.579Z,1537683324.579 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T06:16:24.979Z,1537683384.979 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T06:16:59.635Z,1537683419.635 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003071
2018-09-23T06:19:00.181Z,1537683540.181 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-32768,V
2018-09-23T06:19:30.580Z,1537683570.580 [Default:CheckIn:C.Wait](INFO): Done Waiting.
2018-09-23T06:19:30.580Z,1537683570.580 [Default:CheckIn:C.Wait] Stopped
2018-09-23T06:19:30.580Z,1537683570.580 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-23T06:19:30.585Z,1537683570.585 [Default:CheckIn:D] Running Loop=1
2018-09-23T06:19:30.988Z,1537683570.988 [Default:CheckIn:D] Stopped
2018-09-23T06:19:30.988Z,1537683570.988 [Default:CheckIn:E] Running Loop=1
2018-09-23T06:19:31.395Z,1537683571.395 [Default:CheckIn:E](IMPORTANT): Default mission has been running for 7.774383 min 
2018-09-23T06:19:31.395Z,1537683571.395 [Default:CheckIn:E] Stopped
2018-09-23T06:19:31.395Z,1537683571.395 [Default:CheckIn](INFO): Completed Default:CheckIn
2018-09-23T06:19:31.395Z,1537683571.395 [Default:CheckIn] Stopped
2018-09-23T06:19:31.395Z,1537683571.395 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-23T06:19:31.396Z,1537683571.396 [Default:CheckIn](INFO): Running loop #2
2018-09-23T06:19:31.396Z,1537683571.396 [Default:CheckIn] Running Loop=2
2018-09-23T06:19:31.396Z,1537683571.396 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-23T06:19:31.396Z,1537683571.396 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-23T06:19:32.152Z,1537683572.152 [NAL9602](INFO): Powering up
2018-09-23T06:19:42.930Z,1537683582.930 [NAL9602](INFO): NAL9602 initialized
2018-09-23T06:20:17.172Z,1537683617.172 [NAL9602](IMPORTANT): SBD MO Status=0, MOMSN=1245, MT Status=1, MTMSN=56
2018-09-23T06:20:17.172Z,1537683617.172 [NAL9602](INFO): Data available in MT queue