INFO 2018-12-21 08:49:56,789Z lrauvNc4ToNetcdf.py processResampleNc4File():855 Reading /mbari/LRAUV/whoidhs/missionlogs/2018/20180920_20180925/20180923T135420/201809231354_201809231604.nc4 file...
INFO 2018-12-21 08:50:05,148Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources
INFO 2018-12-21 08:50:05,512Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources
INFO 2018-12-21 08:50:05,879Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources
INFO 2018-12-21 08:50:06,245Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources
INFO 2018-12-21 08:50:06,250Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator
INFO 2018-12-21 08:50:06,621Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator
INFO 2018-12-21 08:50:06,985Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator
INFO 2018-12-21 08:50:07,350Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator
WARNING 2018-12-21 08:50:07,351Z lrauvNc4ToNetcdf.py processResampleNc4File():937 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180920_20180925/20180923T135420/201809231354_201809231604.nc4
WARNING 2018-12-21 08:50:07,351Z lrauvNc4ToNetcdf.py processResampleNc4File():937 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180920_20180925/20180923T135420/201809231354_201809231604.nc4
WARNING 2018-12-21 08:50:07,351Z lrauvNc4ToNetcdf.py processResampleNc4File():937 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180920_20180925/20180923T135420/201809231354_201809231604.nc4
WARNING 2018-12-21 08:50:07,351Z lrauvNc4ToNetcdf.py processResampleNc4File():937 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180920_20180925/20180923T135420/201809231354_201809231604.nc4
WARNING 2018-12-21 08:50:07,352Z lrauvNc4ToNetcdf.py processResampleNc4File():937 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180920_20180925/20180923T135420/201809231354_201809231604.nc4
WARNING 2018-12-21 08:50:07,352Z lrauvNc4ToNetcdf.py processResampleNc4File():937 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180920_20180925/20180923T135420/201809231354_201809231604.nc4
WARNING 2018-12-21 08:50:07,352Z lrauvNc4ToNetcdf.py processResampleNc4File():937 'downwelling_photosynthetic_photon_flux_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180920_20180925/20180923T135420/201809231354_201809231604.nc4
INFO 2018-12-21 08:50:07,356Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group WetLabsBB2FL parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll
INFO 2018-12-21 08:50:07,359Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group WetLabsBB2FL parameter Output470 renaming to bbp470
INFO 2018-12-21 08:50:07,363Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group WetLabsBB2FL parameter Output650 renaming to bbp650
INFO 2018-12-21 08:50:07,395Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge
INFO 2018-12-21 08:50:07,427Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage
INFO 2018-12-21 08:50:07,431Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group NAL9602 parameter time_fix renaming to fix_time
INFO 2018-12-21 08:50:07,436Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude
INFO 2018-12-21 08:50:07,440Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude
WARNING 2018-12-21 08:50:07,440Z lrauvNc4ToNetcdf.py processResampleNc4File():937 'platform_average_current' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180920_20180925/20180923T135420/201809231354_201809231604.nc4
INFO 2018-12-21 08:50:07,550Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position
INFO 2018-12-21 08:50:07,597Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle
INFO 2018-12-21 08:50:07,606Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position
INFO 2018-12-21 08:50:07,641Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle
INFO 2018-12-21 08:50:07,770Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate
INFO 2018-12-21 08:50:08,166Z lrauvNc4ToNetcdf.py createNav():425 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2018-12-21 08:50:08,562Z lrauvNc4ToNetcdf.py createNav():425 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2018-12-21 08:50:08,959Z lrauvNc4ToNetcdf.py createNav():425 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2018-12-21 08:50:08,960Z lrauvNc4ToNetcdf.py nudge_coords():520 /mbari/LRAUV/whoidhs/missionlogs/2018/20180920_20180925/20180923T135420/201809231354_201809231604.nc4
INFO 2018-12-21 08:50:09,601Z lrauvNc4ToNetcdf.py nudge_coords():528 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s)
INFO 2018-12-21 08:50:09,602Z lrauvNc4ToNetcdf.py nudge_coords():544                  -            -            -         0    0.00              -              -
WARNING 2018-12-21 08:50:09,604Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.346653938) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:50:09,606Z lrauvNc4ToNetcdf.py nudge_coords():565    0:        0.347    0.0000588    0.0000807       118    0.89          10.99          16.87
WARNING 2018-12-21 08:50:09,609Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.344763994) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:50:09,610Z lrauvNc4ToNetcdf.py nudge_coords():565    1:        0.345    0.0004892    0.0004288      1008    7.48           6.93          10.62
WARNING 2018-12-21 08:50:09,613Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.346790076) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:50:09,614Z lrauvNc4ToNetcdf.py nudge_coords():565    2:        0.347    0.0001842    0.0003172       589    4.58           8.37          12.83
WARNING 2018-12-21 08:50:09,618Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.346832037) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:50:09,618Z lrauvNc4ToNetcdf.py nudge_coords():565    3:        0.347   -0.0000262   -0.0000212         9    0.06         -42.36         -64.95
WARNING 2018-12-21 08:50:09,622Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.331461907) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:50:09,623Z lrauvNc4ToNetcdf.py nudge_coords():565    4:        0.331    0.0000083   -0.0000080        24    0.33          -2.93          -4.49
WARNING 2018-12-21 08:50:09,626Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.356042862) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:50:09,626Z lrauvNc4ToNetcdf.py nudge_coords():565    5:        0.356    0.0001943    0.0003377       326    2.17          18.78          28.79
WARNING 2018-12-21 08:50:09,629Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.345808983) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:50:09,630Z lrauvNc4ToNetcdf.py nudge_coords():565    6:        0.346    0.0004298    0.0006023      1106    7.82           9.31          14.27
WARNING 2018-12-21 08:50:09,633Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.338512898) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:50:09,634Z lrauvNc4ToNetcdf.py nudge_coords():565    7:        0.339    0.0001447    0.0001168       196    1.69           8.35          12.79
WARNING 2018-12-21 08:50:09,637Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.359141112) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:50:09,638Z lrauvNc4ToNetcdf.py nudge_coords():565    8:        0.359   -0.0000036    0.0000030        10    0.07           5.32           8.15
WARNING 2018-12-21 08:50:09,641Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.354861021) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:50:09,642Z lrauvNc4ToNetcdf.py nudge_coords():565    9:        0.355    0.0000163    0.0000290        24    0.33          10.64          16.30
WARNING 2018-12-21 08:50:09,645Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.34769392) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:50:09,646Z lrauvNc4ToNetcdf.py nudge_coords():565   10:        0.348    0.0007840    0.0007810      2771   18.48           5.11           7.83
WARNING 2018-12-21 08:50:09,649Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.337466954) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:50:09,650Z lrauvNc4ToNetcdf.py nudge_coords():565   11:        0.337   -0.0001478    0.0006173       964    7.00          10.68          16.33
WARNING 2018-12-21 08:50:09,653Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.342679977) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:50:09,654Z lrauvNc4ToNetcdf.py nudge_coords():565   12:        0.343   -0.0000568    0.0004495       897    6.56           8.30          12.69
WARNING 2018-12-21 08:50:09,657Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.341550112) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:50:09,658Z lrauvNc4ToNetcdf.py nudge_coords():565   13:        0.342    0.0000038    0.0004878       851    6.06           9.76          14.91
WARNING 2018-12-21 08:50:09,661Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.346940041) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:50:09,662Z lrauvNc4ToNetcdf.py nudge_coords():565   14:        0.347   -0.0000667    0.0005425       896    6.43          10.25          15.64
WARNING 2018-12-21 08:50:09,665Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.343240023) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:50:09,666Z lrauvNc4ToNetcdf.py nudge_coords():565   15:        0.343   -0.0001082    0.0004012       627    4.50          10.81          16.50
WARNING 2018-12-21 08:50:09,669Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.347858905) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:50:09,670Z lrauvNc4ToNetcdf.py nudge_coords():565   16:        0.348   -0.0005667    0.0010003      1519   10.81          11.24          17.14
WARNING 2018-12-21 08:50:09,673Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.339246988) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:50:09,674Z lrauvNc4ToNetcdf.py nudge_coords():565   17:        0.339   -0.0001493    0.0001110       339    2.56           5.27           8.03
WARNING 2018-12-21 08:50:09,677Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.388784885) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:50:09,678Z lrauvNc4ToNetcdf.py nudge_coords():565   18:        0.389    0.0000510    0.0001190        24    0.33          43.51          66.32
WARNING 2018-12-21 08:50:09,681Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.355180979) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:50:09,681Z lrauvNc4ToNetcdf.py nudge_coords():565   19:        0.355    0.0000097    0.0000258         9    0.06          53.33          81.29
WARNING 2018-12-21 08:50:09,684Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.344782114) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:50:09,685Z lrauvNc4ToNetcdf.py nudge_coords():565   20:        0.345   -0.0000253    0.0000075        24    0.33           2.73           4.16
WARNING 2018-12-21 08:50:09,688Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.315619946) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:50:09,689Z lrauvNc4ToNetcdf.py nudge_coords():565   21:        0.316    0.0002439    0.0004329      2758   18.40           2.86           4.36
WARNING 2018-12-21 08:50:09,692Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.326184988) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:50:09,693Z lrauvNc4ToNetcdf.py nudge_coords():565   22:        0.326   -0.0001830    0.0001313       284    2.21           7.23          11.02
WARNING 2018-12-21 08:50:09,696Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.349829197) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:50:09,697Z lrauvNc4ToNetcdf.py nudge_coords():565   23:        0.350   -0.0003756    0.0001400      1398    9.33           1.83           2.78
WARNING 2018-12-21 08:50:09,700Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.337630033) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:50:09,701Z lrauvNc4ToNetcdf.py nudge_coords():565   24:        0.338   -0.0003552    0.0002525      1056    7.30           4.23           6.41
INFO 2018-12-21 08:50:09,705Z lrauvNc4ToNetcdf.py nudge_coords():589   26:            -            -            -       171    1.41              -              -
INFO 2018-12-21 08:50:09,705Z lrauvNc4ToNetcdf.py nudge_coords():593 Points in final series = 17998
INFO 2018-12-21 08:50:09,747Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():466 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20180923T125430/20180923T170431/data.csv
INFO 2018-12-21 08:50:09,774Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():489 Found 0 position values from the Tracking database
INFO 2018-12-21 08:50:09,778Z lrauvNc4ToNetcdf.py processResampleNc4File():981 ['fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'chlorophyll', 'bbp470', 'bbp650', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time']
INFO 2018-12-21 08:50:09,979Z lrauvNc4ToNetcdf.py processResampleNc4File():984 Wrote /mbari/LRAUV/whoidhs/missionlogs/2018/20180920_20180925/20180923T135420/201809231354_201809231604_2S_scieng.nc