2018-09-23T13:54:20.301Z,1537710860.301 [Supervisor](DEBUG): Initializing supervisor.
2018-09-23T13:54:20.304Z,1537710860.304 [SyncHandler](DEBUG): Created PCaller Thread at 404514E0
2018-09-23T13:54:20.304Z,1537710860.304 [SyncHandler](INFO): Protected caller Thread ID is 3169
2018-09-23T13:54:20.305Z,1537710860.305 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2018-09-23T13:54:20.306Z,1537710860.306 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 404814E0
2018-09-23T13:54:20.306Z,1537710860.306 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 3170
2018-09-23T13:54:20.309Z,1537710860.309 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2018-09-23T13:54:20.322Z,1537710860.322 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2018-09-23T13:54:20.323Z,1537710860.323 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 404B14E0
2018-09-23T13:54:20.323Z,1537710860.323 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 3171
2018-09-23T13:54:20.324Z,1537710860.324 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2018-09-23T13:54:20.325Z,1537710860.325 [logger ThreadHandler](DEBUG): Created PCaller Thread at 404E14E0
2018-09-23T13:54:20.325Z,1537710860.325 [logger ThreadHandler](INFO): Protected caller Thread ID is 3172
2018-09-23T13:54:20.327Z,1537710860.327 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2018-09-23T13:54:20.328Z,1537710860.328 [Supervisor](INFO): Looking for Config files in directory: Config/
2018-09-23T13:54:20.329Z,1537710860.329 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2018-09-23T13:54:20.523Z,1537710860.523 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2018-09-23T13:54:20.523Z,1537710860.523 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2018-09-23T13:54:20.669Z,1537710860.669 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2018-09-23T13:54:20.670Z,1537710860.670 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2018-09-23T13:54:21.029Z,1537710861.029 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2018-09-23T13:54:21.030Z,1537710861.030 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2018-09-23T13:54:21.171Z,1537710861.171 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2018-09-23T13:54:21.171Z,1537710861.171 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2018-09-23T13:54:21.252Z,1537710861.252 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2018-09-23T13:54:21.460Z,1537710861.460 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2018-09-23T13:54:21.461Z,1537710861.461 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2018-09-23T13:54:21.560Z,1537710861.560 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2018-09-23T13:54:21.560Z,1537710861.560 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2018-09-23T13:54:21.915Z,1537710861.915 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2018-09-23T13:54:21.916Z,1537710861.916 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2018-09-23T13:54:22.386Z,1537710862.386 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2018-09-23T13:54:22.387Z,1537710862.387 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2018-09-23T13:54:22.711Z,1537710862.711 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2018-09-23T13:54:22.712Z,1537710862.712 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2018-09-23T13:54:23.227Z,1537710863.227 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2018-09-23T13:54:23.228Z,1537710863.228 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2018-09-23T13:54:23.443Z,1537710863.443 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2018-09-23T13:54:23.444Z,1537710863.444 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2018-09-23T13:54:23.542Z,1537710863.542 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2018-09-23T13:54:23.543Z,1537710863.543 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2018-09-23T13:54:24.094Z,1537710864.094 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2018-09-23T13:54:24.094Z,1537710864.094 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2018-09-23T13:54:24.202Z,1537710864.202 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2018-09-23T13:54:24.204Z,1537710864.204 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-whoidhs/
2018-09-23T13:54:24.205Z,1537710864.205 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/Battery.cfg
2018-09-23T13:54:24.442Z,1537710864.442 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Battery
2018-09-23T13:54:24.443Z,1537710864.443 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/BIT.cfg
2018-09-23T13:54:24.542Z,1537710864.542 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/Navigation.cfg
2018-09-23T13:54:24.637Z,1537710864.637 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/Control.cfg
2018-09-23T13:54:24.742Z,1537710864.742 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/Simulator.cfg
2018-09-23T13:54:24.828Z,1537710864.828 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/Science.cfg
2018-09-23T13:54:24.966Z,1537710864.966 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/Sensor.cfg
2018-09-23T13:54:25.152Z,1537710865.152 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/Servo.cfg
2018-09-23T13:54:25.264Z,1537710865.264 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/logger.cfg
2018-09-23T13:54:25.350Z,1537710865.350 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/secure.cfg
2018-09-23T13:54:25.434Z,1537710865.434 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/vehicle.cfg
2018-09-23T13:54:25.668Z,1537710865.668 [Supervisor](IMPORTANT): Reading configuration overrides from Data/persisted.cfg
2018-09-23T13:54:25.681Z,1537710865.681 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2018-09-23T13:54:25.937Z,1537710865.937 [SBIT](DEBUG): Construct Startup Built In Test.
2018-09-23T13:54:25.968Z,1537710865.968 [SBIT] Loaded
2018-09-23T13:54:25.968Z,1537710865.968 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2018-09-23T13:54:25.969Z,1537710865.969 [IBIT](DEBUG): Construct Initiated Built In Test.
2018-09-23T13:54:25.998Z,1537710865.998 [IBIT] Loaded
2018-09-23T13:54:25.998Z,1537710865.998 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2018-09-23T13:54:26.001Z,1537710866.001 [CBIT](DEBUG): Construct Continuous Built In Test.
2018-09-23T13:54:26.159Z,1537710866.159 [CBIT] Loaded
2018-09-23T13:54:26.159Z,1537710866.159 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2018-09-23T13:54:26.160Z,1537710866.160 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2018-09-23T13:54:26.160Z,1537710866.160 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2018-09-23T13:54:26.227Z,1537710866.227 [VerticalControl](DEBUG): Construct VerticalControl.
2018-09-23T13:54:26.330Z,1537710866.330 [VerticalControl] Loaded
2018-09-23T13:54:26.331Z,1537710866.331 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2018-09-23T13:54:26.331Z,1537710866.331 [HorizontalControl](DEBUG): Construct HorizontalControl.
2018-09-23T13:54:26.394Z,1537710866.394 [HorizontalControl] Loaded
2018-09-23T13:54:26.395Z,1537710866.395 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2018-09-23T13:54:26.395Z,1537710866.395 [SpeedControl](DEBUG): Construct SpeedControl.
2018-09-23T13:54:26.401Z,1537710866.401 [SpeedControl] Loaded
2018-09-23T13:54:26.402Z,1537710866.402 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2018-09-23T13:54:26.402Z,1537710866.402 [LoopControl](DEBUG): Construct LoopControl.
2018-09-23T13:54:26.403Z,1537710866.403 [LoopControl] Loaded
2018-09-23T13:54:26.403Z,1537710866.403 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2018-09-23T13:54:26.403Z,1537710866.404 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2018-09-23T13:54:26.404Z,1537710866.404 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2018-09-23T13:54:26.445Z,1537710866.445 [DepthRateCalculator] Loaded
2018-09-23T13:54:26.446Z,1537710866.446 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2018-09-23T13:54:26.451Z,1537710866.451 [PitchRateCalculator] Loaded
2018-09-23T13:54:26.451Z,1537710866.451 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2018-09-23T13:54:26.468Z,1537710866.468 [SpeedCalculator] Loaded
2018-09-23T13:54:26.468Z,1537710866.468 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2018-09-23T13:54:26.490Z,1537710866.490 [TempGradientCalculator] Loaded
2018-09-23T13:54:26.491Z,1537710866.491 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2018-09-23T13:54:26.496Z,1537710866.496 [YawRateCalculator] Loaded
2018-09-23T13:54:26.496Z,1537710866.496 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2018-09-23T13:54:26.526Z,1537710866.526 [ElevatorOffsetCalculator] Loaded
2018-09-23T13:54:26.527Z,1537710866.527 [ComponentRegistry](DEBUG): SyncComponent "ElevatorOffsetCalculator" handled in the control thread.
2018-09-23T13:54:26.527Z,1537710866.527 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2018-09-23T13:54:26.528Z,1537710866.528 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2018-09-23T13:54:26.591Z,1537710866.591 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2018-09-23T13:54:26.592Z,1537710866.592 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2018-09-23T13:54:26.830Z,1537710866.830 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2018-09-23T13:54:26.831Z,1537710866.831 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2018-09-23T13:54:26.929Z,1537710866.929 [DeadReckonUsingMultipleVelocitySources] Loaded
2018-09-23T13:54:26.929Z,1537710866.929 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2018-09-23T13:54:26.985Z,1537710866.985 [DeadReckonUsingSpeedCalculator] Loaded
2018-09-23T13:54:26.985Z,1537710866.985 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingSpeedCalculator" handled in the control thread.
2018-09-23T13:54:27.002Z,1537710867.002 [NavChart] Loaded
2018-09-23T13:54:27.003Z,1537710867.003 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2018-09-23T13:54:27.007Z,1537710867.007 [UniversalFixResidualReporter] Loaded
2018-09-23T13:54:27.007Z,1537710867.007 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2018-09-23T13:54:27.008Z,1537710867.008 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2018-09-23T13:54:27.008Z,1537710867.008 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2018-09-23T13:54:27.021Z,1537710867.021 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2018-09-23T13:54:27.022Z,1537710867.022 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2018-09-23T13:54:27.222Z,1537710867.222 [WetLabsBB2FL] Loaded
2018-09-23T13:54:27.223Z,1537710867.223 [ComponentRegistry](DEBUG): Component "WetLabsBB2FL" handled in its own thread.
2018-09-23T13:54:27.224Z,1537710867.224 [WetLabsBB2FL ThreadHandler](DEBUG): Created PCaller Thread at 406DB4E0
2018-09-23T13:54:27.224Z,1537710867.224 [WetLabsBB2FL ThreadHandler](INFO): Protected caller Thread ID is 3251
2018-09-23T13:54:27.269Z,1537710867.269 [WetLabsSeaOWL_UV_A] Loaded
2018-09-23T13:54:27.269Z,1537710867.269 [ComponentRegistry](DEBUG): Component "WetLabsSeaOWL_UV_A" handled in its own thread.
2018-09-23T13:54:27.270Z,1537710867.270 [WetLabsSeaOWL_UV_A ThreadHandler](DEBUG): Created PCaller Thread at 4070B4E0
2018-09-23T13:54:27.271Z,1537710867.271 [WetLabsSeaOWL_UV_A ThreadHandler](INFO): Protected caller Thread ID is 3252
2018-09-23T13:54:27.271Z,1537710867.271 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2018-09-23T13:54:27.272Z,1537710867.272 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2018-09-23T13:54:27.573Z,1537710867.573 [AHRS_M2] Loaded
2018-09-23T13:54:27.574Z,1537710867.574 [ComponentRegistry](DEBUG): SyncComponent "AHRS_M2" handled in the control thread.
2018-09-23T13:54:27.647Z,1537710867.647 [DataOverHttps] Loaded
2018-09-23T13:54:27.647Z,1537710867.647 [ComponentRegistry](DEBUG): SyncComponent "DataOverHttps" handled in the control thread.
2018-09-23T13:54:27.661Z,1537710867.661 [Depth_Keller] Loaded
2018-09-23T13:54:27.661Z,1537710867.661 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2018-09-23T13:54:27.667Z,1537710867.667 [DropWeight] Loaded
2018-09-23T13:54:27.667Z,1537710867.667 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2018-09-23T13:54:27.758Z,1537710867.758 [NAL9602] Loaded
2018-09-23T13:54:27.758Z,1537710867.758 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2018-09-23T13:54:27.764Z,1537710867.764 [Onboard] Loaded
2018-09-23T13:54:27.764Z,1537710867.764 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2018-09-23T13:54:27.771Z,1537710867.771 [Radio_Surface] Loaded
2018-09-23T13:54:27.772Z,1537710867.772 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2018-09-23T13:54:27.773Z,1537710867.773 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 4096C4E0
2018-09-23T13:54:27.773Z,1537710867.773 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 3253
2018-09-23T13:54:27.802Z,1537710867.802 [RDI_Pathfinder] Loaded
2018-09-23T13:54:27.802Z,1537710867.802 [ComponentRegistry](DEBUG): SyncComponent "RDI_Pathfinder" handled in the control thread.
2018-09-23T13:54:27.809Z,1537710867.809 [SCPI] Loaded
2018-09-23T13:54:27.809Z,1537710867.809 [ComponentRegistry](DEBUG): SyncComponent "SCPI" handled in the control thread.
2018-09-23T13:54:29.616Z,1537710869.616 [BPC1] Loaded
2018-09-23T13:54:29.617Z,1537710869.617 [ComponentRegistry](DEBUG): SyncComponent "BPC1" handled in the control thread.
2018-09-23T13:54:29.617Z,1537710869.617 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2018-09-23T13:54:29.618Z,1537710869.618 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2018-09-23T13:54:29.922Z,1537710869.922 [BuoyancyServo] Loaded
2018-09-23T13:54:29.923Z,1537710869.923 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2018-09-23T13:54:29.935Z,1537710869.935 [ElevatorServo] Loaded
2018-09-23T13:54:29.935Z,1537710869.935 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2018-09-23T13:54:29.947Z,1537710869.947 [MassServo] Loaded
2018-09-23T13:54:29.947Z,1537710869.947 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2018-09-23T13:54:29.959Z,1537710869.959 [RudderServo] Loaded
2018-09-23T13:54:29.959Z,1537710869.959 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2018-09-23T13:54:29.971Z,1537710869.971 [ThrusterServo] Loaded
2018-09-23T13:54:29.971Z,1537710869.971 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2018-09-23T13:54:29.972Z,1537710869.972 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2018-09-23T13:54:29.972Z,1537710869.972 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2018-09-23T13:54:30.070Z,1537710870.070 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2018-09-23T13:54:30.070Z,1537710870.070 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2018-09-23T13:54:30.094Z,1537710870.094 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2018-09-23T13:54:30.098Z,1537710870.098 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2018-09-23T13:54:30.099Z,1537710870.099 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2018-09-23T13:54:30.106Z,1537710870.106 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2018-09-23T13:54:30.107Z,1537710870.107 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 40A154E0
2018-09-23T13:54:30.107Z,1537710870.107 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 3254
2018-09-23T13:54:30.112Z,1537710870.112 [Supervisor](INFO): Main Thread ID is 795
2018-09-23T13:54:30.112Z,1537710870.112 [Supervisor](DEBUG): Running supervisor.
2018-09-23T13:54:30.113Z,1537710870.113 [CommandLine ThreadHandler](INFO): Handler Thread ID is 3255
2018-09-23T13:54:30.115Z,1537710870.115 [controlThread ThreadHandler](INFO): Handler Thread ID is 3256
2018-09-23T13:54:30.116Z,1537710870.116 [controlThread](DEBUG): Initializing ControlThread
2018-09-23T13:54:30.116Z,1537710870.116 [SBIT](INFO): Initialize SBIT Component.
2018-09-23T13:54:30.117Z,1537710870.117 [SBIT](IMPORTANT): git: 2018-09-20
2018-09-23T13:54:30.117Z,1537710870.117 [SBIT](INFO): git hash: cc82e4f04ca47b19cdcc10b5d3e1760510b3ba6f
2018-09-23T13:54:30.118Z,1537710870.118 [SBIT](IMPORTANT): Kernel Release: 2.6.27.8
2018-09-23T13:54:30.118Z,1537710870.118 [SBIT](IMPORTANT): Kernel Version:#2 PREEMPT Thu Jan 11 20:13:48 PST 2018
2018-09-23T13:54:30.119Z,1537710870.119 [SBIT](INFO): Beginning SBIT in 20.000000 seconds.
2018-09-23T13:54:30.119Z,1537710870.119 [IBIT](INFO): Initialize IBIT Component.
2018-09-23T13:54:30.120Z,1537710870.120 [CBIT](DEBUG): Initialize CBIT Component.
2018-09-23T13:54:30.121Z,1537710870.121 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2018-09-23T13:54:30.122Z,1537710870.122 [logger ThreadHandler](INFO): Handler Thread ID is 3257
2018-09-23T13:54:30.149Z,1537710870.149 [WetLabsBB2FL ThreadHandler](INFO): Handler Thread ID is 3258
2018-09-23T13:54:30.150Z,1537710870.150 [WetLabsBB2FL](INFO): Powering down
2018-09-23T13:54:30.181Z,1537710870.181 [WetLabsSeaOWL_UV_A ThreadHandler](INFO): Handler Thread ID is 3259
2018-09-23T13:54:30.183Z,1537710870.183 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-23T13:54:30.209Z,1537710870.209 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 3260
2018-09-23T13:54:30.215Z,1537710870.215 [Radio_Surface](INFO): Powering up
2018-09-23T13:54:30.225Z,1537710870.225 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 3261
2018-09-23T13:54:30.228Z,1537710870.228 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US1WC07M.000
2018-09-23T13:54:30.228Z,1537710870.228 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2018-09-23T13:54:30.230Z,1537710870.230 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2018-09-23T13:54:30.232Z,1537710870.232 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2018-09-23T13:54:30.232Z,1537710870.232 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2018-09-23T13:54:30.233Z,1537710870.233 [LoopControl](DEBUG): Initialize LoopControlComponent.
2018-09-23T13:54:30.233Z,1537710870.233 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2018-09-23T13:54:30.233Z,1537710870.233 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2018-09-23T13:54:30.234Z,1537710870.234 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2018-09-23T13:54:30.234Z,1537710870.234 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2018-09-23T13:54:30.234Z,1537710870.234 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2018-09-23T13:54:30.235Z,1537710870.235 [ElevatorOffsetCalculator](DEBUG): Initializing ElevatorOffsetCalculator.
2018-09-23T13:54:30.235Z,1537710870.235 [DeadReckonUsingMultipleVelocitySources](DEBUG): Initializing DeadReckonUsingMultipleVelocitySources component.
2018-09-23T13:54:30.236Z,1537710870.236 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider orientation measurement stale after 120s.
2018-09-23T13:54:30.237Z,1537710870.237 [DeadReckonUsingMultipleVelocitySources](INFO): Will consider velocity measurement stale after 20s.
2018-09-23T13:54:30.237Z,1537710870.237 [DeadReckonUsingSpeedCalculator](DEBUG): Initializing DeadReckonUsingSpeedCalculator component.
2018-09-23T13:54:30.238Z,1537710870.238 [DeadReckonUsingSpeedCalculator](INFO): Will consider orientation measurement stale after 120s.
2018-09-23T13:54:30.238Z,1537710870.238 [DeadReckonUsingSpeedCalculator](INFO): Will consider velocity measurement stale after 20s.
2018-09-23T13:54:30.238Z,1537710870.238 [NavChart](DEBUG): Initialize NavChart Navigation.
2018-09-23T13:54:30.239Z,1537710870.239 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2018-09-23T13:54:30.241Z,1537710870.241 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US2WC11M.000
2018-09-23T13:54:30.241Z,1537710870.241 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2018-09-23T13:54:30.241Z,1537710870.241 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US3CA52M.000
2018-09-23T13:54:30.241Z,1537710870.241 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2018-09-23T13:54:30.242Z,1537710870.242 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US4CA60M.000
2018-09-23T13:54:30.242Z,1537710870.242 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2018-09-23T13:54:30.242Z,1537710870.242 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA50M.000
2018-09-23T13:54:30.242Z,1537710870.242 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2018-09-23T13:54:30.242Z,1537710870.242 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA61M.000
2018-09-23T13:54:30.243Z,1537710870.243 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2018-09-23T13:54:30.243Z,1537710870.243 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA62M.000
2018-09-23T13:54:30.243Z,1537710870.243 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2018-09-23T13:54:30.243Z,1537710870.243 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA83M.000
2018-09-23T13:54:30.243Z,1537710870.243 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2018-09-23T13:54:30.254Z,1537710870.254 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2018-09-23T13:54:30.286Z,1537710870.286 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-23T13:54:30.321Z,1537710870.321 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2018-09-23T13:54:30.322Z,1537710870.322 [MissionManager](INFO): Loading Mission: Missions/Default.xml
2018-09-23T13:54:30.417Z,1537710870.417 [MissionManager](INFO): DefineArg Default.ElapsedSinceDefaultStarted = 0.000000 min
2018-09-23T13:54:30.418Z,1537710870.418 [Default:A.Wait](DEBUG): Construct Wait.
2018-09-23T13:54:30.420Z,1537710870.420 [Default:B.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-23T13:54:30.447Z,1537710870.447 [Default:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2018-09-23T13:54:30.450Z,1537710870.450 [Default:CheckIn:C.Wait](DEBUG): Construct Wait.
2018-09-23T13:54:30.471Z,1537710870.471 [Default:E.Execute](DEBUG): Construct Execute.
2018-09-23T13:54:30.475Z,1537710870.475 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xmlns="Tethys"
         xmlns:Units="Tethys/Units"
         xmlns:Guidance="Tethys/Guidance"
         xmlns:Universal="Tethys/Universal"
         xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                             Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                             Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                             Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
         Id="Default">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <Guidance:Wait>
        <Description>
            Wait a moment to see if the scheduler starts a new mission before
            starting to actually run Default.
        </Description>
        <Sequence/>
        <Setting><Guidance:Wait.duration/><Units:second/><Value>13</Value></Setting>
    </Guidance:Wait>

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn on</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2018-09-23T13:54:30.493Z,1537710870.493 [controlThread](DEBUG): Component order: CycleStarter,AHRS_M2,DataOverHttps,Depth_Keller,DropWeight,NAL9602,Onboard,RDI_Pathfinder,SCPI,BPC1,Depth_Keller,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,YawRateCalculator,ElevatorOffsetCalculator,DeadReckonUsingMultipleVelocitySources,DeadReckonUsingSpeedCalculator,NavChart,UniversalFixResidualReporter,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2018-09-23T13:54:30.515Z,1537710870.515 [AHRS_M2](DEBUG): Initializing AHRS_M2.
2018-09-23T13:54:30.542Z,1537710870.542 [DataOverHttps](DEBUG): dashIP=134.89.2.23 starts with a digit so assuming it is a numeric IP
2018-09-23T13:54:30.554Z,1537710870.554 [Depth_Keller](ERROR): Pressure reading out of range: 1913.424561 decibar
2018-09-23T13:54:30.696Z,1537710870.696 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-09-23T13:54:30.789Z,1537710870.789 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2018-09-23T13:54:30.821Z,1537710870.821 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-09-23T13:54:30.937Z,1537710870.937 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-23T13:54:30.945Z,1537710870.945 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-23T13:54:30.967Z,1537710870.967 [ElevatorServo](DEBUG): Initializing EZServoServo.
2018-09-23T13:54:30.973Z,1537710870.973 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2018-09-23T13:54:30.979Z,1537710870.979 [MassServo](DEBUG): Initializing EZServoServo.
2018-09-23T13:54:30.985Z,1537710870.985 [MassServo](DEBUG): Initializing MassServo.
2018-09-23T13:54:31.007Z,1537710871.007 [RudderServo](DEBUG): Initializing EZServoServo.
2018-09-23T13:54:31.013Z,1537710871.013 [RudderServo](DEBUG): Initializing RudderServo.
2018-09-23T13:54:31.042Z,1537710871.042 [ThrusterServo](DEBUG): Initializing EZServoServo.
2018-09-23T13:54:31.049Z,1537710871.049 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2018-09-23T13:54:31.241Z,1537710871.241 [DepthRateCalculator](ERROR): Depth measurement is not active
2018-09-23T13:54:31.244Z,1537710871.244 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2018-09-23T13:54:31.261Z,1537710871.261 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-09-23T13:54:31.592Z,1537710871.592 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2018-09-23T13:54:31.593Z,1537710871.593 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-09-23T13:54:31.941Z,1537710871.941 [BuoyancyServo](ERROR): Buoyancy initialization uart error serial timeout
2018-09-23T13:54:31.941Z,1537710871.941 [BuoyancyServo](FAULT): Buoyancy failed to initialize
2018-09-23T13:54:31.941Z,1537710871.941 [BuoyancyServo] Communications Fault, FailCount= 1
2018-09-23T13:54:31.941Z,1537710871.941 [BuoyancyServo](ERROR): Communications Fault
2018-09-23T13:54:32.149Z,1537710872.149 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-09-23T13:54:32.197Z,1537710872.197 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2018-09-23T13:54:32.198Z,1537710872.198 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-09-23T13:54:32.211Z,1537710872.211 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-23T13:54:32.211Z,1537710872.211 [BuoyancyServo](INFO): Powering down
2018-09-23T13:54:32.584Z,1537710872.584 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2018-09-23T13:54:32.585Z,1537710872.585 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-09-23T13:54:32.984Z,1537710872.984 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2018-09-23T13:54:32.985Z,1537710872.985 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-09-23T13:54:33.384Z,1537710873.384 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2018-09-23T13:54:33.386Z,1537710873.386 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-09-23T13:54:33.824Z,1537710873.824 [DeadReckonUsingMultipleVelocitySources](DEBUG): Starting up and don't have orientation data yet.
2018-09-23T13:54:33.826Z,1537710873.826 [DeadReckonUsingSpeedCalculator](DEBUG): Starting up and don't have orientation data yet.
2018-09-23T13:54:34.318Z,1537710874.318 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-23T13:54:34.319Z,1537710874.319 [BuoyancyServo] No Fault, FailCount= 1
2018-09-23T13:54:34.623Z,1537710874.623 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-23T13:54:34.742Z,1537710874.742 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-23T13:54:43.935Z,1537710883.935 [RDI_Pathfinder](ERROR): Failed to parse:Pathfinder
2018-09-23T13:54:50.756Z,1537710890.756 [SBIT](IMPORTANT): Beginning Startup BIT
2018-09-23T13:54:50.760Z,1537710890.760 [CBIT](IMPORTANT): Beginning ground fault scan
2018-09-23T13:54:58.027Z,1537710898.027 [NAL9602](INFO): Powering up NAL9602
2018-09-23T13:55:01.743Z,1537710901.743 [CBIT](IMPORTANT): No ground fault detected
mA:
CHAN A0 (Batt): -0.022478
CHAN A1 (24V): -0.025568
CHAN A2 (12V): -0.007417
CHAN A3 (5V): -0.002257
CHAN B0 (3.3V): 0.000294
CHAN B1 (3.15aV): 0.000095
CHAN B2 (3.15bV): 0.000214
CHAN B3 (GND): 0.001833
OPEN: 0.004773
Full Scale Calc: 4.765 mA, -1.589 mA
2018-09-23T13:55:09.039Z,1537710909.039 [NAL9602](INFO): NAL9602 initialized
2018-09-23T13:55:44.434Z,1537710944.434 [SBIT](IMPORTANT): SBIT PASSED
2018-09-23T13:55:44.482Z,1537710944.482 [CommandLine](IMPORTANT): got command configSet list
2018-09-23T13:55:44.482Z,1537710944.482 [CommandLine](IMPORTANT): Listing configuration overrides from Data/persisted.cfg
2018-09-23T13:55:44.483Z,1537710944.483 [CommandLine](IMPORTANT): Aanderaa_O2.loadAtStartup=0 bool;

2018-09-23T13:55:44.483Z,1537710944.483 [CommandLine](IMPORTANT): BPC1.batterySamplingInterval=1 hour;

2018-09-23T13:55:44.484Z,1537710944.484 [CommandLine](IMPORTANT): BuoyancyServo.accel=400 none;

2018-09-23T13:55:44.484Z,1537710944.484 [CommandLine](IMPORTANT): BuoyancyServo.fastPumpCoefficient=1 none;

2018-09-23T13:55:44.484Z,1537710944.484 [CommandLine](IMPORTANT): BuoyancyServo.velocity=400 none;

2018-09-23T13:55:44.484Z,1537710944.484 [CommandLine](IMPORTANT): Express linearApproximation WetLabsSeaOWL_UV_A.mass_concentration_of_chlorophyll_in_sea_water 0.500000 microgram_per_liter;

2018-09-23T13:55:44.484Z,1537710944.484 [CommandLine](IMPORTANT): Express linearApproximation height_above_sea_floor 5.000000 meter;

2018-09-23T13:55:44.484Z,1537710944.484 [CommandLine](IMPORTANT): IBIT.batteryVoltageThreshold=13.7 volt;

2018-09-23T13:55:44.484Z,1537710944.484 [CommandLine](IMPORTANT): RDI_PathfinderUp.loadAtStartup=0 bool;

2018-09-23T13:55:44.485Z,1537710944.485 [CommandLine](IMPORTANT): VerticalControl.buoyancyNeutral=205 cubic_centimeter;

2018-09-23T13:55:44.485Z,1537710944.485 [CommandLine](IMPORTANT): VerticalControl.massDefault=0 millimeter;

2018-09-23T13:55:44.485Z,1537710944.485 [CommandLine](IMPORTANT): WetLabsBB2FL.loadAtStartup=1 bool;

2018-09-23T13:55:44.485Z,1537710944.485 [CommandLine](IMPORTANT): WetLabsBB2FL.simulateHardware=0 bool;

2018-09-23T13:55:44.815Z,1537710944.815 [MissionManager](IMPORTANT): Started mission Startup
2018-09-23T13:55:44.815Z,1537710944.815 [Startup] Running Loop=1
2018-09-23T13:55:44.815Z,1537710944.815 [Startup](DEBUG): Aggregate::initialize Startup
2018-09-23T13:55:44.815Z,1537710944.815 [Startup:A.GoToSurface] Running Loop=1
2018-09-23T13:55:44.815Z,1537710944.815 [Startup:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T13:55:44.816Z,1537710944.816 [Startup:A.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-23T13:55:44.816Z,1537710944.816 [Startup:A.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-23T13:55:44.821Z,1537710944.821 [Startup:A.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-23T13:55:44.821Z,1537710944.821 [Startup:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T13:55:44.822Z,1537710944.822 [Startup:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T13:55:44.832Z,1537710944.832 [Startup:StartupSatComms] Running Loop=1
2018-09-23T13:55:44.832Z,1537710944.832 [Startup:StartupSatComms](DEBUG): Aggregate::initialize Startup:StartupSatComms
2018-09-23T13:55:44.832Z,1537710944.832 [Startup:StartupSatComms:A] Running Loop=1
2018-09-23T13:55:45.164Z,1537710945.164 [NAL9602](INFO): SBD MO Status=0, MOMSN=1276, MT Status=0, MTMSN=0
2018-09-23T13:55:45.164Z,1537710945.164 [NAL9602](INFO): No messages in MT queue
2018-09-23T13:55:45.253Z,1537710945.253 [Startup:StartupSatComms:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-23T13:56:45.202Z,1537711005.202 [Startup:StartupSatComms:A](INFO): Timed out from 2018-09-23T13:55:44.8Z
2018-09-23T13:56:45.202Z,1537711005.202 [Startup:StartupSatComms:A] Stopped
2018-09-23T13:56:45.202Z,1537711005.202 [Startup:StartupSatComms:B] Running Loop=1
2018-09-23T13:56:45.601Z,1537711005.601 [Startup:StartupSatComms:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-23T13:57:07.955Z,1537711027.955 [NAL9602](INFO): GPS fix at 20180923T135657: (36.837907, -121.896265)
2018-09-23T13:57:38.484Z,1537711058.484 [NAL9602](INFO): SBD MO Status=1, MOMSN=1277, MT Status=0, MTMSN=0
2018-09-23T13:57:38.537Z,1537711058.537 [NAL9602](INFO): Sent 25 bytes from file Logs/20180923T134835/Courier0010.lzma
2018-09-23T13:57:38.537Z,1537711058.537 [NAL9602](INFO): Packets left to send: 0
2018-09-23T13:57:38.540Z,1537711058.540 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180923T134835/Courier0010.lzma.parts/0000.sbd
2018-09-23T13:57:38.540Z,1537711058.540 [NAL9602](DEBUG): Completed sending Logs/20180923T134835/Courier0010.lzma
2018-09-23T13:57:45.466Z,1537711065.466 [Startup:StartupSatComms:B](INFO): Timed out from 2018-09-23T13:56:45.2Z
2018-09-23T13:57:45.466Z,1537711065.466 [Startup:StartupSatComms:B] Stopped
2018-09-23T13:57:45.466Z,1537711065.466 [Startup:StartupSatComms](INFO): Completed Startup:StartupSatComms
2018-09-23T13:57:45.466Z,1537711065.466 [Startup:StartupSatComms] Stopped
2018-09-23T13:57:45.466Z,1537711065.466 [Startup:StartupSatComms](DEBUG): Aggregate::uninitialize Startup:StartupSatComms
2018-09-23T13:57:45.467Z,1537711065.467 [Startup](INFO): Completed Startup
2018-09-23T13:57:45.467Z,1537711065.467 [MissionManager](INFO): Startup is completed.
2018-09-23T13:57:45.468Z,1537711065.468 [MissionManager](INFO): Uninitializing Mission Startup
2018-09-23T13:57:45.468Z,1537711065.468 [Startup] Stopped
2018-09-23T13:57:45.468Z,1537711065.468 [Startup](DEBUG): Aggregate::uninitialize Startup
2018-09-23T13:57:45.468Z,1537711065.468 [Startup:A.GoToSurface] Stopped
2018-09-23T13:57:45.468Z,1537711065.468 [Startup:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-23T13:57:45.916Z,1537711065.916 [MissionManager](IMPORTANT): Started mission Default
2018-09-23T13:57:45.916Z,1537711065.916 [Default] Running Loop=1
2018-09-23T13:57:45.916Z,1537711065.916 [Default](DEBUG): Aggregate::initialize Default
2018-09-23T13:57:45.916Z,1537711065.916 [Default:B.GoToSurface] Running Loop=1
2018-09-23T13:57:45.916Z,1537711065.916 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T13:57:45.921Z,1537711065.921 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-23T13:57:45.921Z,1537711065.921 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-23T13:57:45.922Z,1537711065.922 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-23T13:57:45.922Z,1537711065.922 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T13:57:45.922Z,1537711065.922 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T13:57:45.923Z,1537711065.923 [Default:A.Wait] Running Loop=1
2018-09-23T13:57:45.923Z,1537711065.923 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-23T13:57:47.428Z,1537711067.428 [NAL9602](INFO): SBD MO Status=1, MOMSN=1278, MT Status=0, MTMSN=0
2018-09-23T13:57:47.477Z,1537711067.477 [NAL9602](INFO): Sent 133 bytes from file Logs/20180923T134835/Express0011.lzma
2018-09-23T13:57:47.477Z,1537711067.477 [NAL9602](INFO): Packets left to send: 0
2018-09-23T13:57:47.479Z,1537711067.479 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180923T134835/Express0011.lzma.parts/0000.sbd
2018-09-23T13:57:47.479Z,1537711067.479 [NAL9602](DEBUG): Completed sending Logs/20180923T134835/Express0011.lzma
2018-09-23T13:57:56.360Z,1537711076.360 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.011478
2018-09-23T13:57:59.206Z,1537711079.206 [Default:A.Wait](INFO): Done Waiting.
2018-09-23T13:57:59.206Z,1537711079.206 [Default:A.Wait] Stopped
2018-09-23T13:57:59.206Z,1537711079.206 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-23T13:57:59.597Z,1537711079.597 [Default:CheckIn] Running Loop=1
2018-09-23T13:57:59.597Z,1537711079.597 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-23T13:57:59.597Z,1537711079.597 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-23T13:58:00.010Z,1537711080.010 [Default:CheckIn:Read_GPS](DEBUG): Initialize ReadDataComponent to sense time_fix
2018-09-23T13:58:01.562Z,1537711081.562 [NAL9602](INFO): GPS fix at 20180923T135751: (36.837988, -121.896206)
2018-09-23T13:58:01.664Z,1537711081.664 [Default:CheckIn:Read_GPS] Stopped
2018-09-23T13:58:01.664Z,1537711081.664 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-23T13:58:02.026Z,1537711082.026 [Default:CheckIn:Read_Iridium](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-23T13:58:06.186Z,1537711086.186 [DataOverHttps](INFO): Sending 214 bytes from file Logs/20180923T135420/Courier0004.lzma
2018-09-23T13:58:06.960Z,1537711086.960 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Courier0004.lzma.bak
2018-09-23T13:58:06.961Z,1537711086.961 [DataOverHttps](INFO): SBD MOMSN=8567188
2018-09-23T13:58:16.168Z,1537711096.168 [DataOverHttps](INFO): Sending 1035 bytes from file Logs/20180923T135420/Express0001.lzma
2018-09-23T13:58:16.929Z,1537711096.929 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Express0001.lzma.bak
2018-09-23T13:58:16.929Z,1537711096.929 [DataOverHttps](INFO): SBD MOMSN=8567192
2018-09-23T13:58:26.196Z,1537711106.196 [DataOverHttps](INFO): Sending 228 bytes from file Logs/20180923T135420/Express0005.lzma
2018-09-23T13:58:26.973Z,1537711106.973 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Express0005.lzma.bak
2018-09-23T13:58:26.973Z,1537711106.973 [DataOverHttps](INFO): SBD MOMSN=8567219
2018-09-23T13:58:27.518Z,1537711107.518 [Default:CheckIn:Read_Iridium] Stopped
2018-09-23T13:58:27.518Z,1537711107.518 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-23T13:58:27.518Z,1537711107.518 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-23T13:58:36.370Z,1537711116.370 [NAL9602](INFO): Powering down
2018-09-23T14:00:32.385Z,1537711232.385 [DataOverHttps](IMPORTANT): SBD MTMSN=20180923T140022
2018-09-23T14:00:36.557Z,1537711236.557 [DataOverHttps](INFO): Received command:load Science/trackPatch.xml;set trackPatch.MissionTimeout 10 min;set trackPatch.YoYoMinDepth 2 m;set trackPatch.YoYoMaxDepth 10 m;set trackPatch.PeakChlShallowBnd 3 m;set trackPatch.PeakChlDeepBnd 8 m;run
2018-09-23T14:00:36.587Z,1537711236.587 [CommandLine](IMPORTANT): got command load ./Missions/Science/trackPatch.xml
2018-09-23T14:00:36.588Z,1537711236.588 [MissionManager](INFO): Loading Mission: ./Missions/Science/trackPatch.xml
2018-09-23T14:00:36.840Z,1537711236.840 [MissionManager](INFO): DefineArg trackPatch.MinAltitude = 5.000000 m
2018-09-23T14:00:36.843Z,1537711236.843 [MissionManager](INFO): DefineArg trackPatch.MaxDepth = 65.000000 m
2018-09-23T14:00:36.847Z,1537711236.847 [MissionManager](INFO): DefineArg trackPatch.MinWaterDepth = 10.000000 m
2018-09-23T14:00:36.882Z,1537711236.882 [MissionManager](INFO): DefineArg trackPatch.MinOffshore = 2000.000000 m
2018-09-23T14:00:36.884Z,1537711236.884 [MissionManager](INFO): DefineArg trackPatch.NeedCommsTime = 180.000000 min
2018-09-23T14:00:36.887Z,1537711236.887 [MissionManager](INFO): DefineArg trackPatch.MissionTimeout = 56.000000 h
2018-09-23T14:00:36.911Z,1537711236.911 [MissionManager](INFO): DefineArg trackPatch.MassDefault = 0.000000 cm
2018-09-23T14:00:36.915Z,1537711236.915 [MissionManager](INFO): DefineArg trackPatch.BuoyancyNeutral = 205.000004 cc
2018-09-23T14:00:36.918Z,1537711236.918 [MissionManager](INFO): DefineArg trackPatch.YoYoMinDepth = 2.000000 m
2018-09-23T14:00:36.931Z,1537711236.931 [MissionManager](INFO): DefineArg trackPatch.YoYoMaxDepth = 10.000000 m
2018-09-23T14:00:36.935Z,1537711236.935 [MissionManager](INFO): DefineArg trackPatch.YoYoUpPitch = 20.000000 arcdeg
2018-09-23T14:00:36.950Z,1537711236.950 [MissionManager](INFO): DefineArg trackPatch.YoYoDownPitch = -20.000000 arcdeg
2018-09-23T14:00:36.953Z,1537711236.953 [MissionManager](INFO): DefineArg trackPatch.Speed = 1.000000 m/s
2018-09-23T14:00:36.956Z,1537711236.956 [MissionManager](INFO): DefineArg trackPatch.WpMaxDistance = 1000.000000 m
2018-09-23T14:00:36.971Z,1537711236.971 [MissionManager](INFO): DefineArg trackPatch.WpTimeout = 8000.000000 s
2018-09-23T14:00:36.974Z,1537711236.974 [MissionManager](INFO): DefineArg trackPatch.WaterFrame = 1 bool
2018-09-23T14:00:36.977Z,1537711236.977 [MissionManager](INFO): DefineArg trackPatch.Repeat = 20.000000 count
2018-09-23T14:00:36.980Z,1537711236.980 [MissionManager](INFO): DefineArg trackPatch.Turn = 90.000000 arcdeg
2018-09-23T14:00:36.983Z,1537711236.983 [MissionManager](INFO): DefineArg trackPatch.Reverse = 180.000000 arcdeg
2018-09-23T14:00:36.986Z,1537711236.986 [MissionManager](INFO): DefineArg trackPatch.TwoPi = 360.000000 arcdeg
2018-09-23T14:00:37.011Z,1537711237.011 [MissionManager](INFO): DefineArg trackPatch.LowPassWindowLen = 20.000000 count
2018-09-23T14:00:37.014Z,1537711237.014 [MissionManager](INFO): DefineArg trackPatch.PeakChlShallowBnd = 3.000000 m
2018-09-23T14:00:37.016Z,1537711237.016 [MissionManager](INFO): DefineArg trackPatch.PeakChlDeepBnd = 8.000000 m
2018-09-23T14:00:37.020Z,1537711237.020 [MissionManager](INFO): DefineArg trackPatch.FilterWidth = 4.000000 count
2018-09-23T14:00:37.034Z,1537711237.034 [MissionManager](INFO): DefineArg trackPatch.BeginThreshold = nan ug/l
2018-09-23T14:00:37.037Z,1537711237.037 [MissionManager](INFO): DefineArg trackPatch.OffPeakFraction = 80.000000 %
2018-09-23T14:00:37.040Z,1537711237.040 [MissionManager](INFO): DefineArg trackPatch.PatchMode = 0 bool
2018-09-23T14:00:37.063Z,1537711237.063 [MissionManager](INFO): DefineArg trackPatch.WpBearing = -90.000000 arcdeg
2018-09-23T14:00:37.066Z,1537711237.066 [MissionManager](INFO): DefineOutput trackPatch.PatchDetectOn = 0 bool
2018-09-23T14:00:37.069Z,1537711237.069 [MissionManager](INFO): DefineOutput trackPatch.WpDone = 0 bool
2018-09-23T14:00:37.074Z,1537711237.074 [MissionManager](INFO): DefineOutput trackPatch.PatchChl = nan ug/l
2018-09-23T14:00:37.077Z,1537711237.077 [MissionManager](INFO): DefineOutput trackPatch.PatchChlDepth = nan m
2018-09-23T14:00:37.096Z,1537711237.096 [MissionManager](INFO): DefineOutput trackPatch.PatchChlLatitude = nan arcdeg
2018-09-23T14:00:37.099Z,1537711237.099 [MissionManager](INFO): DefineOutput trackPatch.PatchChlLongitude = nan arcdeg
2018-09-23T14:00:37.114Z,1537711237.114 [MissionManager](INFO): DefineOutput trackPatch.PatchChlDistance = 0.000000 m
2018-09-23T14:00:37.115Z,1537711237.115 [trackPatch:A.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-23T14:00:37.135Z,1537711237.135 [trackPatch:B.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-23T14:00:37.143Z,1537711237.143 [MissionManager](INFO): Inserting Stack: Missions/Insert/Surface.xml
2018-09-23T14:00:37.191Z,1537711237.191 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.SurfaceDepthRate = nan m/s
2018-09-23T14:00:37.203Z,1537711237.203 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.SurfacePitch = 20.000000 arcdeg
2018-09-23T14:00:37.206Z,1537711237.206 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.SurfaceSpeed = 1.000000 m/s
2018-09-23T14:00:37.209Z,1537711237.209 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.IridiumTimeout = 30.000000 min
2018-09-23T14:00:37.212Z,1537711237.212 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.UnpackSplitAtSurface = 0 bool
2018-09-23T14:00:37.225Z,1537711237.225 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-23T14:00:37.268Z,1537711237.268 [MissionManager](INFO): RedefineArg trackPatch:SurfaceCommsSplit.SurfacePitch = value:20.000000 arcdeg
2018-09-23T14:00:37.274Z,1537711237.274 [MissionManager](INFO): RedefineArg trackPatch:SurfaceCommsSplit.SurfaceSpeed = value:1.000000 m/s
2018-09-23T14:00:37.276Z,1537711237.276 [MissionManager](INFO): RedefineArg trackPatch:SurfaceCommsSplit.UnpackSplitAtSurface = value:1 bool
2018-09-23T14:00:37.282Z,1537711237.282 [MissionManager](INFO): Inserting Stack: Missions/Insert/Surface.xml
2018-09-23T14:00:37.328Z,1537711237.328 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.SurfaceDepthRate = nan m/s
2018-09-23T14:00:37.335Z,1537711237.335 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.SurfacePitch = 20.000000 arcdeg
2018-09-23T14:00:37.339Z,1537711237.339 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.SurfaceSpeed = 1.000000 m/s
2018-09-23T14:00:37.350Z,1537711237.350 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.IridiumTimeout = 30.000000 min
2018-09-23T14:00:37.352Z,1537711237.352 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.UnpackSplitAtSurface = 0 bool
2018-09-23T14:00:37.358Z,1537711237.358 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-23T14:00:37.398Z,1537711237.398 [MissionManager](INFO): RedefineArg trackPatch:SurfaceComms:SurfaceComms.SurfacePitch = value:20.000000 arcdeg
2018-09-23T14:00:37.400Z,1537711237.400 [MissionManager](INFO): RedefineArg trackPatch:SurfaceComms:SurfaceComms.SurfaceSpeed = value:1.000000 m/s
2018-09-23T14:00:37.415Z,1537711237.415 [trackPatch:F.OffshoreEnvelope](DEBUG): Construct OffshoreEnvelope.
2018-09-23T14:00:37.439Z,1537711237.439 [trackPatch:G.WaterDepthEnvelope](DEBUG): Construct WaterDepthEnvelope.
2018-09-23T14:00:37.446Z,1537711237.446 [trackPatch:H.Pitch](DEBUG): Construct.
2018-09-23T14:00:37.466Z,1537711237.466 [trackPatch:I.Buoyancy](DEBUG): Construct Buoyancy.
2018-09-23T14:00:37.468Z,1537711237.468 [MissionManager](INFO): Inserting Stack: Missions/Insert/Science.xml
2018-09-23T14:00:37.788Z,1537711237.788 [MissionManager](INFO): DefineArg trackPatch:Science.SampleISUS = 0 bool
2018-09-23T14:00:37.809Z,1537711237.809 [MissionManager](INFO): DefineArg trackPatch:Science.SampleISUSmaxPitch = 60.000000 arcdeg
2018-09-23T14:00:37.812Z,1537711237.812 [MissionManager](INFO): DefineArg trackPatch:Science.SampleISUSminPitch = -60.000000 arcdeg
2018-09-23T14:00:37.815Z,1537711237.815 [MissionManager](INFO): DefineArg trackPatch:Science.PeakDetectChlActive = 0 bool
2018-09-23T14:00:37.817Z,1537711237.817 [MissionManager](INFO): DefineArg trackPatch:Science.HighestChlPeakReportActive = 0 bool
2018-09-23T14:00:37.820Z,1537711237.820 [MissionManager](INFO): DefineArg trackPatch:Science.PatchTracking = 1 bool
2018-09-23T14:00:37.835Z,1537711237.835 [MissionManager](INFO): DefineArg trackPatch:Science.FilterWidthHorizontal = 3.000000 count
2018-09-23T14:00:37.838Z,1537711237.838 [MissionManager](INFO): DefineArg trackPatch:Science.NumProfilesSlidingwindow = 100.000000 count
2018-09-23T14:00:37.841Z,1537711237.841 [MissionManager](INFO): DefineArg trackPatch:Science.OffPeakFractionHorizontal = 80.000000 %
2018-09-23T14:00:37.844Z,1537711237.844 [MissionManager](INFO): DefineArg trackPatch:Science.PeakDetectNO3Active = 0 bool
2018-09-23T14:00:37.861Z,1537711237.861 [MissionManager](INFO): DefineArg trackPatch:Science.PeakDetectOilActive = 0 bool
2018-09-23T14:00:37.864Z,1537711237.864 [MissionManager](INFO): DefineArg trackPatch:Science.UpwardDerivativeOfTemperatureActive = 0 bool
2018-09-23T14:00:37.867Z,1537711237.867 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledAanderaaO2 = 0.000000 bool
2018-09-23T14:00:37.881Z,1537711237.881 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledNeilBrown = 0.000000 bool
2018-09-23T14:00:37.885Z,1537711237.885 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledSeabird = 0.000000 bool
2018-09-23T14:00:37.888Z,1537711237.888 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledTurbulence_NPS = 0.000000 bool
2018-09-23T14:00:37.912Z,1537711237.912 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledWetLabsBB2FL = 1.000000 bool
2018-09-23T14:00:37.915Z,1537711237.915 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledWetLabsSeaOWL_UV_A = 1.000000 bool
2018-09-23T14:00:37.940Z,1537711237.940 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledISUS = 0.000000 bool
2018-09-23T14:00:37.943Z,1537711237.943 [MissionManager](INFO): DefineArg trackPatch:Science.LowPassWindowLength = 20.000000 count
2018-09-23T14:00:37.946Z,1537711237.946 [MissionManager](INFO): DefineArg trackPatch:Science.PeakChlShallowBound = 10.000000 m
2018-09-23T14:00:37.960Z,1537711237.960 [MissionManager](INFO): DefineArg trackPatch:Science.PeakChlDeepBound = 20.000000 m
2018-09-23T14:00:37.963Z,1537711237.963 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChl = 0.000000 ug/l
2018-09-23T14:00:37.966Z,1537711237.966 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlDepth = 0.000000 m
2018-09-23T14:00:37.990Z,1537711237.990 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlTemperature = 0.000000 degC
2018-09-23T14:00:37.993Z,1537711237.993 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlLatitude = nan arcdeg
2018-09-23T14:00:37.996Z,1537711237.996 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlLongitude = nan arcdeg
2018-09-23T14:00:37.999Z,1537711237.999 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3 = 0.000000 umol/l
2018-09-23T14:00:38.014Z,1537711238.014 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3Depth = 0.000000 m
2018-09-23T14:00:38.017Z,1537711238.017 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3Latitude = nan arcdeg
2018-09-23T14:00:38.020Z,1537711238.020 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3Longitude = nan arcdeg
2018-09-23T14:00:38.024Z,1537711238.024 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChl = 0.000000 m
2018-09-23T14:00:38.040Z,1537711238.040 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlDepth = 0.000000 m
2018-09-23T14:00:38.043Z,1537711238.043 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlLatitude = nan arcdeg
2018-09-23T14:00:38.046Z,1537711238.046 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlLongitude = nan arcdeg
2018-09-23T14:00:38.058Z,1537711238.058 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlDistance = nan m
2018-09-23T14:00:38.061Z,1537711238.061 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOil = 0.000000 kg/m3
2018-09-23T14:00:38.064Z,1537711238.064 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOilDepth = 0.000000 m
2018-09-23T14:00:38.067Z,1537711238.067 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOilLatitude = nan arcdeg
2018-09-23T14:00:38.082Z,1537711238.082 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOilLongitude = nan arcdeg
2018-09-23T14:00:38.114Z,1537711238.114 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-23T14:00:38.139Z,1537711238.139 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-23T14:00:38.181Z,1537711238.181 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-23T14:00:38.190Z,1537711238.190 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-23T14:00:38.212Z,1537711238.212 [MissionManager](INFO): RedefineArg trackPatch:Science.PeakDetectChlActive = value:1 bool
2018-09-23T14:00:38.214Z,1537711238.214 [MissionManager](INFO): RedefineArg trackPatch:Science.PatchTracking = value:1 bool
2018-09-23T14:00:38.216Z,1537711238.216 [MissionManager](INFO): RedefineArg trackPatch:Science.LowPassWindowLength = reader:trackPatch.LowPassWindowLen
2018-09-23T14:00:38.218Z,1537711238.218 [MissionManager](INFO): RedefineArg trackPatch:Science.PeakChlShallowBound = reader:trackPatch.PeakChlShallowBnd
2018-09-23T14:00:38.219Z,1537711238.219 [MissionManager](INFO): RedefineArg trackPatch:Science.PeakChlDeepBound = reader:trackPatch.PeakChlDeepBnd
2018-09-23T14:00:38.233Z,1537711238.233 [MissionManager](INFO): RedefineArg trackPatch:Science.OffPeakFractionHorizontal = reader:trackPatch.OffPeakFraction
2018-09-23T14:00:38.234Z,1537711238.234 [trackPatch:K.SetSpeed](DEBUG): Construct.
2018-09-23T14:00:38.237Z,1537711238.237 [trackPatch:L.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-23T14:00:38.263Z,1537711238.263 [trackPatch:M.YoYo](DEBUG): Construct YoYo.
2018-09-23T14:00:38.289Z,1537711238.289 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-23T14:00:38.343Z,1537711238.343 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-23T14:00:38.362Z,1537711238.362 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-23T14:00:38.384Z,1537711238.384 [trackPatch:PatchDetectHorizontal:InLegWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-23T14:00:38.446Z,1537711238.446 [trackPatch:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-23T14:00:38.556Z,1537711238.556 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Trigger="Tethys/Trigger" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Trigger http://okeanids.mbari.org/tethys/Xml/Trigger.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="trackPatch">

    <Description>
        Vehicle runs yo-yos, with patch detect enabled for cholorphyll
        concentration.
    </Description>

<!-- Vehicle safety parameters -->

    <DefineArg Name="MinAltitude"><Description>
        Minimum altitude for the entire mission.
    </Description><Units:meter/><Value>5</Value></DefineArg>

    <DefineArg Name="MaxDepth"><Description>
        Maximum depth for the entire mission.
    </Description><Units:meter/><Value>65</Value></DefineArg>

    <DefineArg Name="MinWaterDepth"><Description>
        Minimum water depth for the entire mission.
    </Description><Units:meter/><Value>10</Value></DefineArg>

    <DefineArg Name="MinOffshore"><Description>
        Minimum offshore distance for the entire mission.
    </Description><Units:meter/><Value>2000</Value></DefineArg>

    <DefineArg Name="NeedCommsTime"><Description>
        Maximum time between surfacings for communications
    </Description><Units:minute/><Value>180</Value></DefineArg>

    <DefineArg Name="MissionTimeout"><Description>
        Timeout for the entire mission
    </Description><Units:hour/><Value>56</Value></DefineArg>

    <DefineArg Name="MassDefault"><Description>
        Static setting for mass during the mission. Defaults to massDefault
        setting in the Config/Control.cfg file.
    </Description><Control:VerticalControl.massDefault/></DefineArg>

    <DefineArg Name="BuoyancyNeutral"><Description>
        Buoyancy bladder position while performing the YoYo behavior. Defaults
        to buoyancyNeutral setting in the Config/Control.cfg file.
    </Description><Control:VerticalControl.buoyancyNeutral/></DefineArg>

<!-- Basic guidance settings -->

    <DefineArg Name="YoYoMinDepth"><Description>
        Minimum depth during yo-yo's.
    </Description><Units:meter/><Value>2.0</Value></DefineArg>

    <DefineArg Name="YoYoMaxDepth"><Description>
        Maximum depth during yo-yo's.
    </Description><Units:meter/><Value>10.0</Value></DefineArg>

    <DefineArg Name="YoYoUpPitch"><Description>
        Pitch when yo-yo's are ascending.
    </Description><Units:degree/><Value>20.0</Value></DefineArg>

    <DefineArg Name="YoYoDownPitch"><Description>
        Pitch when yo-yo's are descending.
    </Description><Units:degree/><Value>-20.0</Value></DefineArg>

    <DefineArg Name="Speed"><Description>
        Vehicle speed.
    </Description><Units:meter_per_second/><Value>1</Value></DefineArg>

    <DefineArg Name="WpMaxDistance"><Description>
        Maximum length of each tracking leg
<!--debug
    </Description><Units:meter/><Value>7500</Value></DefineArg>
-->
    </Description><Units:meter/><Value>1000</Value></DefineArg>

    <DefineArg Name="WpTimeout"><Description>
        Maximum duration of each tracking leg
    </Description><Units:second/><Value>8000</Value></DefineArg>

    <DefineArg Name="WaterFrame"><Description>
        Set WaterFrame true to drive towards waypoints in the water frame of
        reference
    </Description><True/></DefineArg>

    <DefineArg Name="Repeat"><Description>
        Maximum number of tracking legs
    </Description><Units:count/><Value>20</Value></DefineArg>

<!-- Constant settings for each tracking leg -->

    <DefineArg Name="Turn"><Description>
        Amount to turn at each leg
    </Description><Units:degree/><Value>90</Value></DefineArg>

    <DefineArg Name="Reverse"><Description>
        Change in bearing which reverses vehicle direction
    </Description><Units:degree/><Value>180</Value></DefineArg>

    <DefineArg Name="TwoPi"><Description>
        Applied to stop run-up of angles
    </Description><Units:degree/><Value>360</Value></DefineArg>

    <DefineArg Name="LowPassWindowLen"><Description>
        Low-pass window length (based on depth sensor sampling interval 0.4
        second) for low-pass filtering.
    </Description><Units:count/><Value>20</Value></DefineArg>

    <DefineArg Name="PeakChlShallowBnd"><Description>
        Shallow depth bound for detecting chl peak on each descent or ascent
        profile.
<!--debug
    </Description><Units:meter/><Value>NaN</Value></DefineArg>
-->
    </Description><Units:meter/><Value>3</Value></DefineArg>

    <DefineArg Name="PeakChlDeepBnd"><Description>
        Deep depth bound for detecting chl peak on each descent or ascent
        profile.
<!--debug
    </Description><Units:meter/><Value>NaN</Value></DefineArg>
-->
    </Description><Units:meter/><Value>8</Value></DefineArg>

    <DefineArg Name="FilterWidth"><Description>
        Width of boxcar filter used in horizontal patch detection
    </Description><Units:count/><Value>4</Value></DefineArg>

    <DefineArg Name="BeginThreshold"><Description>
        If non-NaN, sets threshold for starting horizontal patch detection
    </Description><Units:microgram_per_liter/><Value>NaN</Value></DefineArg>

    <DefineArg Name="OffPeakFraction"><Description>
        When filtered horizontal value is this fraction of the peak, consider it
        outside the patch.
    </Description><Units:percent/><Value>80</Value></DefineArg>

    <DefineArg Name="PatchMode"><Description>
        If true, use center of "in peak" range as the turn-around point. If
        false use maximum horizontal peak location as the turn-around point.
    </Description><False/></DefineArg>

<!-- Variable Settings for each tracking leg -->

    <DefineArg Name="WpBearing"><Description>
        Bearing being followed in the current leg. Set this to initialize start
        direction of patch tracking.
    </Description><Units:degree/><Value>-90</Value></DefineArg>

    <DefineOutput Name="PatchDetectOn"><Description>
        Mission sets this to true when the patch has been crossed.
    </Description><False/></DefineOutput>

    <DefineOutput Name="WpDone"><Description>
        Mission sets this to true when the cross-patch waypoint has been
        reached.
    </Description><False/></DefineOutput>

    <DefineOutput Name="PatchChl"><Units:microgram_per_liter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlDepth"><Units:meter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlDistance"><Units:meter/><Value>0</Value></DefineOutput>

<!-- The timeout -->

    <Timeout Duration="MissionTimeout"/>

<!-- And now the mission -->

    <Guidance:AltitudeEnvelope>
        <Parallel/>
        <Setting><Guidance:AltitudeEnvelope.minAltitude/><Arg Name="MinAltitude"/></Setting>
    </Guidance:AltitudeEnvelope>

    <Guidance:DepthEnvelope>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="MaxDepth"/></Setting>
    </Guidance:DepthEnvelope>

    <Insert Filename="Insert/Surface.xml" Id="SurfaceCommsSplit">
        <RedefineArg Name="SurfacePitch"><Units:degree/><Value>20</Value></RedefineArg>
        <RedefineArg Name="SurfaceSpeed"><Units:meter_per_second/><Value>1</Value></RedefineArg>
        <RedefineArg Name="UnpackSplitAtSurface"><True/></RedefineArg>
    </Insert>

    <Aggregate Id="SurfaceComms">

        <When>
            <Called/>
        </When>

        <Insert Filename="Insert/Surface.xml">
            <RedefineArg Name="SurfacePitch"><Units:degree/><Value>20</Value></RedefineArg>
            <RedefineArg Name="SurfaceSpeed"><Units:meter_per_second/><Value>1</Value></RedefineArg>
        </Insert>

    </Aggregate>

<!-- GPS Update.  Don't go too long w/o a GPS fix. -->

    <Aggregate Id="NeedComms">

        <When>
            <Universal:platform_pitch_angle/>
            <Gt><Units:degree/><Value>0</Value></Gt>
            <And><Elapsed><Universal:time_fix/></Elapsed><Gt><Arg Name="NeedCommsTime"/></Gt></And>
            <Or><Elapsed><Universal:time_fix/></Elapsed><Gt><Arg Name="NeedCommsTime"/><Add><Units:minute/><Value>10</Value></Add></Gt></Or>
        </When>

        <Syslog Severity="Important">NeedComms Timeout Surfacing</Syslog>

        <Call RefId="SurfaceComms"/>

    </Aggregate>

    <Guidance:OffshoreEnvelope>
        <Parallel/>
        <Setting><Guidance:OffshoreEnvelope.minOffshore/><Arg Name="MinOffshore"/></Setting>
    </Guidance:OffshoreEnvelope>

    <Guidance:WaterDepthEnvelope>
        <Parallel/>
        <Setting><Guidance:WaterDepthEnvelope.minWaterDepth/><Arg Name="MinWaterDepth"/></Setting>
    </Guidance:WaterDepthEnvelope>

    <Guidance:Pitch>
        <Parallel/>
        <Setting><Guidance:Pitch.massPosition/><Arg Name="MassDefault"/></Setting>
    </Guidance:Pitch>

    <Guidance:Buoyancy>
        <Parallel/>
        <Setting><Guidance:Buoyancy.position /><Arg Name="BuoyancyNeutral"/></Setting>
    </Guidance:Buoyancy>

<!-- If we're executing here or below, lets' get science data! -->

    <Insert Filename="Insert/Science.xml">
        <RedefineArg Name="PeakDetectChlActive"><True/></RedefineArg>
        <RedefineArg Name="PatchTracking"><True/></RedefineArg>
        <RedefineArg Name="LowPassWindowLength"><Arg Name="LowPassWindowLen"/></RedefineArg>
        <RedefineArg Name="PeakChlShallowBound"><Arg Name="PeakChlShallowBnd"/></RedefineArg>
        <RedefineArg Name="PeakChlDeepBound"><Arg Name="PeakChlDeepBnd"/></RedefineArg>
        <RedefineArg Name="OffPeakFractionHorizontal"><Arg Name="OffPeakFraction"/></RedefineArg>
    </Insert>

    <Guidance:SetSpeed>
        <Parallel/>
        <Setting><Guidance:SetSpeed.speed/><Arg Name="Speed"/></Setting>
    </Guidance:SetSpeed>

    <Guidance:DepthEnvelope>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.minDepth/><Arg Name="YoYoMinDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="YoYoMaxDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:DepthEnvelope.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:DepthEnvelope>

    <Guidance:YoYo>
        <Parallel/>
        <Setting><Guidance:YoYo.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:YoYo.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:YoYo>

    <Aggregate Id="PatchDetectHorizontal">

        <Sequence Repeat="Repeat"/>

        <Aggregate Id="PatchDetection">

            <When>
                <Arg Name="PatchDetectOn"/>
            </When>

            <Trigger:PeakDetectHorizontal Id="PeakDetectHorizontalTrigger">
                <Sequence/>
<!--debug
                <Break><Arg Name="WpDone"/>
                </Break>
-->
                <Setting><Trigger:PeakDetectHorizontal.patchTracking/><Units:bool/><Value>1</Value></Setting>
                <Setting><Trigger:PeakDetectHorizontal.detectFrom/><Arg Name="Science:PeakChl"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.depthFrom/><Arg Name="Science:PeakChlDepth"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.latitudeFrom/><Arg Name="Science:PeakChlLatitude"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.longitudeFrom/><Arg Name="Science:PeakChlLongitude"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.beginThreshold/><Arg Name="BeginThreshold"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.offPeakFraction/><Arg Name="OffPeakFraction"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.filterWidth/><Arg Name="FilterWidth"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.centerPeak/><Arg Name="PatchMode"/></Setting>
                <OutputArg Name="PatchChl"><Trigger:PeakDetectHorizontal.peakDetect/></OutputArg>
                <OutputArg Name="PatchChlDepth"><Trigger:PeakDetectHorizontal.peakDepth/></OutputArg>
                <OutputArg Name="PatchChlLatitude"><Trigger:PeakDetectHorizontal.peakLatitude/></OutputArg>
                <OutputArg Name="PatchChlLongitude"><Trigger:PeakDetectHorizontal.peakLongitude/></OutputArg>
                <OutputArg Name="PatchChlDistance"><Trigger:PeakDetectHorizontal.peakDistance/></OutputArg>
            </Trigger:PeakDetectHorizontal>

            <Syslog Severity="Important">Fell below OffPeakFraction. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Arg Name="PatchChlDepth"/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog>

            <SendData Service="Express"><Arg Name="PatchChl"/><Arg Name="PatchChlDepth"/><Arg Name="PatchChlLatitude"/><Arg Name="PatchChlLongitude"/>
            </SendData>

            <Assign Id="AssignPatchDetectOff"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

        </Aggregate>

        <Assign Id="AssignPatchDetectOn"><Sequence/><Arg Name="PatchDetectOn"/><True/></Assign>

        <Syslog Severity="Important">Next: bearing for CrossLeg: <Arg Name="WpBearing"/><Units:degree/>. WpMaxDistance = <Arg Name="WpMaxDistance"/><Units:meter/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>.</Syslog>

        <Aggregate Id="CrossLeg">

            <Description>
                This is a long leg across the width of the patch. Also the first
                leg in a mission run. Two waypoints run in parallel: a short run
                to the surfacing point, and a longer run to the edge of the
                patch.
            </Description>

            <Sequence/>

            <Break><Arg Name="WpDone"/>
                <Or><Arg Name="PatchDetectOn"/><Eq><False/></Eq></Or>
            </Break>

            <Guidance:Waypoint Id="CrossSurfaceWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="PatchChlDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Call RefId="SurfaceComms"/>

            <Guidance:Waypoint Id="CrossPeakWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="WpMaxDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

<!--debug-->
            <Syslog Severity="Important">CrossPeakWp done. Lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Arg Name="PatchChlDepth"/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog> 

            <Assign Id="AssignPatchDetectOffInCrossLeg"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

            <Assign Id="AssignWpDoneInCrossLeg"><Sequence/><Arg Name="WpDone"/><True/></Assign>

        </Aggregate>

        <Assign Id="AssignWpBearingForInLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Add><Arg Name="Reverse"/></Add><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

        <Syslog Severity="Important">Next: bearing for InLeg: <Arg Name="WpBearing"/><Units:degree/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Arg Name="PatchChlDepth"/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog> 

        <Guidance:Waypoint Id="InLegWp">
            <Description>
                Simply drive back towards the patch center
            </Description>
            <Sequence/>
            <Timeout Duration="WpTimeout"/>
            <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="PatchChlDistance"/></Setting>
            <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
            <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
        </Guidance:Waypoint>

        <Assign Id="AssignWpBearingForOutLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Sub><Arg Name="Turn"/></Sub><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

        <Syslog Severity="Important">Next: bearing for OutLeg: <Arg Name="WpBearing"/><Units:degree/>. WpMaxDistance = <Arg Name="WpMaxDistance"/><Units:meter/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Arg Name="PatchChlDepth"/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog>

        <Call RefId="SurfaceCommsSplit"/>

        <Assign Id="AssignPatchDetectOnForOutLeg"><Sequence/><Arg Name="PatchDetectOn"/><True/></Assign>

        <Aggregate Id="OutLeg">

            <Description>
                Drive outward until edge of patch is detected.
            </Description>

            <Sequence/>

            <Break><Arg Name="WpDone"/>
                <Or><Arg Name="PatchDetectOn"/><Eq><False/></Eq></Or>
            </Break>

            <Guidance:Waypoint Id="OutLegWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="WpMaxDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Assign Id="AssignPatchDetectOffInOutLeg"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

            <Assign Id="AssignWpDoneInOutLeg"><Sequence/><Arg Name="WpDone"/><True/></Assign>

        </Aggregate>

        <Assign Id="AssignWpBearingForCrossLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Add><Arg Name="Reverse"/></Add><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

    </Aggregate>

</Mission>


2018-09-23T14:00:38.562Z,1537711238.562 [CommandLine](IMPORTANT): Loaded ./Missions/Science/trackPatch.xml
2018-09-23T14:00:48.474Z,1537711248.474 [CommandLine](IMPORTANT): got command set trackPatch.MissionTimeout 10.000000 minute
2018-09-23T14:00:48.475Z,1537711248.475 [CommandLine](IMPORTANT): got command set trackPatch.YoYoMinDepth 2.000000 meter
2018-09-23T14:00:48.476Z,1537711248.476 [CommandLine](IMPORTANT): got command set trackPatch.YoYoMaxDepth 10.000000 meter
2018-09-23T14:00:48.477Z,1537711248.477 [CommandLine](IMPORTANT): got command set trackPatch.PeakChlShallowBnd 3.000000 meter
2018-09-23T14:00:48.477Z,1537711248.477 [CommandLine](IMPORTANT): got command set trackPatch.PeakChlDeepBnd 8.000000 meter
2018-09-23T14:00:48.478Z,1537711248.478 [CommandLine](IMPORTANT): got command run
2018-09-23T14:00:48.481Z,1537711248.481 [CommandLine](IMPORTANT): Running 
2018-09-23T14:00:48.535Z,1537711248.535 [RDI_Pathfinder](ERROR): No DVL communication! Re-initializing
2018-09-23T14:00:48.535Z,1537711248.535 [RDI_Pathfinder] Communications Fault, FailCount= 1
2018-09-23T14:00:48.535Z,1537711248.535 [RDI_Pathfinder](ERROR): Communications Fault
2018-09-23T14:00:48.677Z,1537711248.677 [Default] Stopped
2018-09-23T14:00:48.678Z,1537711248.678 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-23T14:00:48.678Z,1537711248.678 [Default:B.GoToSurface] Stopped
2018-09-23T14:00:48.678Z,1537711248.678 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-23T14:00:48.678Z,1537711248.678 [Default:CheckIn] Stopped
2018-09-23T14:00:48.678Z,1537711248.678 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-23T14:00:48.678Z,1537711248.678 [Default:CheckIn:C.Wait] Stopped
2018-09-23T14:00:48.678Z,1537711248.678 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-23T14:00:48.678Z,1537711248.678 [MissionManager](IMPORTANT): Started mission trackPatch
2018-09-23T14:00:48.679Z,1537711248.679 [trackPatch] Running Loop=1
2018-09-23T14:00:48.679Z,1537711248.679 [trackPatch](DEBUG): Aggregate::initialize trackPatch
2018-09-23T14:00:48.679Z,1537711248.679 [trackPatch:A.AltitudeEnvelope] Running Loop=1
2018-09-23T14:00:48.679Z,1537711248.679 [trackPatch:A.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-23T14:00:48.679Z,1537711248.679 [trackPatch:B.DepthEnvelope] Running Loop=1
2018-09-23T14:00:48.679Z,1537711248.679 [trackPatch:B.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-23T14:00:48.680Z,1537711248.680 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-23T14:00:48.680Z,1537711248.680 [trackPatch:F.OffshoreEnvelope](DEBUG): Initialize OffshoreEnvelopeComponent.
2018-09-23T14:00:48.680Z,1537711248.680 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-23T14:00:48.680Z,1537711248.680 [trackPatch:G.WaterDepthEnvelope](DEBUG): Initialize WaterDepthEnvelopeComponent.
2018-09-23T14:00:48.680Z,1537711248.680 [trackPatch:H.Pitch] Running Loop=1
2018-09-23T14:00:48.680Z,1537711248.680 [trackPatch:H.Pitch](DEBUG): Initialize.
2018-09-23T14:00:48.680Z,1537711248.680 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-23T14:00:48.680Z,1537711248.680 [trackPatch:I.Buoyancy](DEBUG): Initialize Buoyancy Component.
2018-09-23T14:00:48.681Z,1537711248.681 [trackPatch:Science] Running Loop=1
2018-09-23T14:00:48.686Z,1537711248.686 [trackPatch:Science](DEBUG): Aggregate::initialize trackPatch:Science
2018-09-23T14:00:48.686Z,1537711248.686 [trackPatch:Science:A] Running Loop=1
2018-09-23T14:00:48.686Z,1537711248.686 [trackPatch:Science:B] Running Loop=1
2018-09-23T14:00:48.686Z,1537711248.686 [trackPatch:Science:C] Running Loop=1
2018-09-23T14:00:48.686Z,1537711248.686 [trackPatch:Science:D] Running Loop=1
2018-09-23T14:00:48.686Z,1537711248.686 [trackPatch:Science:E] Running Loop=1
2018-09-23T14:00:48.686Z,1537711248.686 [trackPatch:Science:F] Running Loop=1
2018-09-23T14:00:48.687Z,1537711248.687 [trackPatch:Science:G] Running Loop=1
2018-09-23T14:00:48.687Z,1537711248.687 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-23T14:00:48.687Z,1537711248.687 [trackPatch:Science:HighestChlPeakReport] Running Loop=1
2018-09-23T14:00:48.687Z,1537711248.687 [trackPatch:Science:HighestChlPeakReport](DEBUG): Aggregate::initialize trackPatch:Science:HighestChlPeakReport
2018-09-23T14:00:48.687Z,1537711248.687 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2018-09-23T14:00:48.687Z,1537711248.687 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2018-09-23T14:00:48.688Z,1537711248.688 [trackPatch:Science:PeakDetectNO3] Running Loop=1
2018-09-23T14:00:48.688Z,1537711248.688 [trackPatch:Science:PeakDetectNO3](DEBUG): Aggregate::initialize trackPatch:Science:PeakDetectNO3
2018-09-23T14:00:48.688Z,1537711248.688 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2018-09-23T14:00:48.688Z,1537711248.688 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-23T14:00:48.695Z,1537711248.695 [trackPatch:Science:PeakDetectOil] Running Loop=1
2018-09-23T14:00:48.695Z,1537711248.695 [trackPatch:Science:PeakDetectOil](DEBUG): Aggregate::initialize trackPatch:Science:PeakDetectOil
2018-09-23T14:00:48.695Z,1537711248.695 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2018-09-23T14:00:48.695Z,1537711248.695 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-23T14:00:48.696Z,1537711248.696 [trackPatch:Science:PeakDetectChl] Running Loop=1
2018-09-23T14:00:48.701Z,1537711248.701 [trackPatch:Science:PeakDetectChl](DEBUG): Aggregate::initialize trackPatch:Science:PeakDetectChl
2018-09-23T14:00:48.701Z,1537711248.701 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2018-09-23T14:00:48.701Z,1537711248.701 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-23T14:00:48.703Z,1537711248.703 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-23T14:00:48.703Z,1537711248.703 [trackPatch:K.SetSpeed](DEBUG): Initialize.
2018-09-23T14:00:48.703Z,1537711248.703 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-23T14:00:48.703Z,1537711248.703 [trackPatch:L.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-23T14:00:48.703Z,1537711248.703 [trackPatch:M.YoYo] Running Loop=1
2018-09-23T14:00:48.703Z,1537711248.703 [trackPatch:M.YoYo](DEBUG): Initialize YoYoComponent.
2018-09-23T14:00:48.704Z,1537711248.704 [trackPatch:SurfaceCommsSplit] Running Loop=1
2018-09-23T14:00:48.704Z,1537711248.704 [trackPatch:SurfaceCommsSplit](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit
2018-09-23T14:00:48.704Z,1537711248.704 [trackPatch:SurfaceCommsSplit:A.GoToSurface] Running Loop=1
2018-09-23T14:00:48.704Z,1537711248.704 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T14:00:48.709Z,1537711248.709 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-23T14:00:48.709Z,1537711248.709 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-23T14:00:48.710Z,1537711248.710 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-23T14:00:48.710Z,1537711248.710 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T14:00:48.711Z,1537711248.711 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T14:00:48.711Z,1537711248.711 [trackPatch:M.YoYo] Running Loop=1
2018-09-23T14:00:48.725Z,1537711248.725 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-23T14:00:48.732Z,1537711248.732 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-23T14:00:48.742Z,1537711248.742 [trackPatch:Science] Running Loop=1
2018-09-23T14:00:48.751Z,1537711248.751 [trackPatch:Science:PeakDetectOil] Stopped
2018-09-23T14:00:48.752Z,1537711248.752 [trackPatch:Science:PeakDetectOil](DEBUG): Aggregate::uninitialize trackPatch:Science:PeakDetectOil
2018-09-23T14:00:48.752Z,1537711248.752 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2018-09-23T14:00:48.752Z,1537711248.752 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-23T14:00:48.752Z,1537711248.752 [trackPatch:Science:PeakDetectNO3] Stopped
2018-09-23T14:00:48.752Z,1537711248.752 [trackPatch:Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize trackPatch:Science:PeakDetectNO3
2018-09-23T14:00:48.752Z,1537711248.752 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2018-09-23T14:00:48.752Z,1537711248.752 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-23T14:00:48.752Z,1537711248.752 [trackPatch:Science:HighestChlPeakReport] Stopped
2018-09-23T14:00:48.752Z,1537711248.752 [trackPatch:Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize trackPatch:Science:HighestChlPeakReport
2018-09-23T14:00:48.752Z,1537711248.752 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2018-09-23T14:00:48.753Z,1537711248.753 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-23T14:00:48.774Z,1537711248.774 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-23T14:00:48.774Z,1537711248.774 [trackPatch:Science:Read_Oil](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-23T14:00:48.776Z,1537711248.776 [trackPatch:Science:G] Running Loop=1
2018-09-23T14:00:48.776Z,1537711248.776 [trackPatch:Science:G](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-23T14:00:48.779Z,1537711248.779 [trackPatch:Science:F] Stopped
2018-09-23T14:00:48.779Z,1537711248.779 [trackPatch:Science:E] Stopped
2018-09-23T14:00:48.779Z,1537711248.779 [trackPatch:Science:D] Stopped
2018-09-23T14:00:48.779Z,1537711248.779 [trackPatch:Science:C] Stopped
2018-09-23T14:00:48.779Z,1537711248.779 [trackPatch:Science:B] Stopped
2018-09-23T14:00:48.779Z,1537711248.779 [trackPatch:Science:A] Stopped
2018-09-23T14:00:48.779Z,1537711248.779 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-23T14:00:48.803Z,1537711248.803 [trackPatch:H.Pitch] Running Loop=1
2018-09-23T14:00:48.825Z,1537711248.825 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-23T14:00:48.830Z,1537711248.830 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-23T14:00:48.871Z,1537711248.871 [trackPatch:SurfaceCommsSplit:B] Running Loop=1
2018-09-23T14:00:48.871Z,1537711248.871 [trackPatch:SurfaceCommsSplit:B](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit:B
2018-09-23T14:00:48.872Z,1537711248.872 [trackPatch:SurfaceCommsSplit:B:A] Running Loop=1
2018-09-23T14:00:48.872Z,1537711248.872 [trackPatch:B.DepthEnvelope] Running Loop=1
2018-09-23T14:00:48.877Z,1537711248.877 [trackPatch:A.AltitudeEnvelope] Running Loop=1
2018-09-23T14:00:48.912Z,1537711248.912 [CBIT](ERROR): Communications Fault in component: RDI_Pathfinder
2018-09-23T14:00:48.969Z,1537711248.969 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-23T14:00:48.969Z,1537711248.969 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-23T14:00:49.045Z,1537711249.045 [RDI_Pathfinder](INFO): Powering down
2018-09-23T14:00:49.110Z,1537711249.110 [trackPatch:SurfaceCommsSplit:B:A](INFO): ##UnpackSplit##
2018-09-23T14:00:49.111Z,1537711249.111 [trackPatch:SurfaceCommsSplit:B:A] Stopped
2018-09-23T14:00:49.112Z,1537711249.112 [trackPatch:SurfaceCommsSplit:B](INFO): Completed trackPatch:SurfaceCommsSplit:B
2018-09-23T14:00:49.112Z,1537711249.112 [trackPatch:SurfaceCommsSplit:B] Stopped
2018-09-23T14:00:49.112Z,1537711249.112 [trackPatch:SurfaceCommsSplit:B](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit:B
2018-09-23T14:00:49.112Z,1537711249.112 [trackPatch:SurfaceCommsSplit:C] Running Loop=1
2018-09-23T14:00:49.112Z,1537711249.112 [trackPatch:SurfaceCommsSplit:C](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit:C
2018-09-23T14:00:49.112Z,1537711249.112 [trackPatch:SurfaceCommsSplit:C:A] Running Loop=1
2018-09-23T14:00:49.401Z,1537711249.401 [trackPatch:M.YoYo] Preempted
2018-09-23T14:00:49.405Z,1537711249.405 [trackPatch:L.DepthEnvelope] Preempted
2018-09-23T14:00:49.405Z,1537711249.405 [trackPatch:K.SetSpeed] Preempted
2018-09-23T14:00:49.405Z,1537711249.405 [trackPatch:Science] Preempted
2018-09-23T14:00:49.405Z,1537711249.405 [trackPatch:Science:G] Preempted
2018-09-23T14:00:49.405Z,1537711249.405 [trackPatch:Science:Read_Oil] Preempted
2018-09-23T14:00:49.405Z,1537711249.405 [trackPatch:I.Buoyancy] Preempted
2018-09-23T14:00:49.405Z,1537711249.405 [trackPatch:H.Pitch] Preempted
2018-09-23T14:00:49.405Z,1537711249.405 [trackPatch:G.WaterDepthEnvelope] Preempted
2018-09-23T14:00:49.405Z,1537711249.405 [trackPatch:F.OffshoreEnvelope] Preempted
2018-09-23T14:00:49.407Z,1537711249.407 [trackPatch:SurfaceCommsSplit:C:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-23T14:00:49.742Z,1537711249.742 [NAL9602](INFO): Powering up
2018-09-23T14:00:49.830Z,1537711249.830 [CBIT](INFO): Clearing failed state for component RDI_Pathfinder
2018-09-23T14:00:49.830Z,1537711249.830 [RDI_Pathfinder] No Fault, FailCount= 1
2018-09-23T14:00:51.137Z,1537711251.137 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-23T14:01:00.942Z,1537711260.942 [NAL9602](INFO): NAL9602 initialized
2018-09-23T14:01:03.356Z,1537711263.356 [RDI_Pathfinder](ERROR): Failed to parse:Pathfinder
2018-09-23T14:01:15.773Z,1537711275.773 [BPC1](INFO): Calculating totals. Valid battery stick count: 56. Valid reserve battery stick count: 6.
2018-09-23T14:01:20.940Z,1537711280.940 [NAL9602](INFO): SBD MO Status=0, MOMSN=1279, MT Status=0, MTMSN=0
2018-09-23T14:01:20.940Z,1537711280.940 [NAL9602](INFO): No messages in MT queue
2018-09-23T14:03:39.513Z,1537711419.513 [RDI_Pathfinder](ERROR): only read 4 of 5 data items
2018-09-23T14:03:39.513Z,1537711419.513 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-32BS,-32768,-32768,-32768,V
2018-09-23T14:05:30.759Z,1537711530.759 [NAL9602](INFO): GPS fix at 20180923T140520: (36.838417, -121.895717)
2018-09-23T14:05:30.817Z,1537711530.817 [trackPatch:SurfaceCommsSplit:C:A] Stopped
2018-09-23T14:05:30.817Z,1537711530.817 [trackPatch:SurfaceCommsSplit:C:B] Running Loop=1
2018-09-23T14:05:31.218Z,1537711531.218 [trackPatch:SurfaceCommsSplit:C:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-23T14:05:35.763Z,1537711535.763 [DataOverHttps](INFO): Sending 225 bytes from file Logs/20180923T135420/Courier0007.lzma
2018-09-23T14:05:36.526Z,1537711536.526 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Courier0007.lzma.bak
2018-09-23T14:05:36.527Z,1537711536.527 [DataOverHttps](IMPORTANT): SBD MOMSN=8567268, MTMSN=20180923T140527
2018-09-23T14:05:40.692Z,1537711540.692 [DataOverHttps](INFO): Received command:show best mass_concentration_of_chlorophyll_in_sea_water
2018-09-23T14:05:41.949Z,1537711541.949 [CommandLine](IMPORTANT): got command show best mass_concentration_of_chlorophyll_in_sea_water
2018-09-23T14:05:41.950Z,1537711541.950 [CommandLine](IMPORTANT): mass_concentration_of_chlorophyll_in_sea_water best is null
2018-09-23T14:05:46.616Z,1537711546.616 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180923T135420/Courier0010.lzma
2018-09-23T14:05:47.395Z,1537711547.395 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Courier0010.lzma.bak
2018-09-23T14:05:47.395Z,1537711547.395 [DataOverHttps](INFO): SBD MOMSN=8567272
2018-09-23T14:05:56.514Z,1537711556.514 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180923T135420/Courier0013.lzma
2018-09-23T14:05:57.301Z,1537711557.301 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Courier0013.lzma.bak
2018-09-23T14:05:57.301Z,1537711557.301 [DataOverHttps](INFO): SBD MOMSN=8567274
2018-09-23T14:06:06.583Z,1537711566.583 [NAL9602](INFO): Powering down
2018-09-23T14:06:06.797Z,1537711566.797 [DataOverHttps](INFO): Sending 370 bytes from file Logs/20180923T135420/Express0008.lzma
2018-09-23T14:06:07.561Z,1537711567.561 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Express0008.lzma.bak
2018-09-23T14:06:07.561Z,1537711567.561 [DataOverHttps](INFO): SBD MOMSN=8567276
2018-09-23T14:06:17.018Z,1537711577.018 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180923T135420/Express0011.lzma
2018-09-23T14:06:17.802Z,1537711577.802 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Express0011.lzma.bak
2018-09-23T14:06:17.802Z,1537711577.802 [DataOverHttps](INFO): SBD MOMSN=8567289
2018-09-23T14:06:26.951Z,1537711586.951 [DataOverHttps](INFO): Sending 192 bytes from file Logs/20180923T135420/Express0014.lzma
2018-09-23T14:06:27.721Z,1537711587.721 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Express0014.lzma.bak
2018-09-23T14:06:27.721Z,1537711587.721 [DataOverHttps](INFO): SBD MOMSN=8567291
2018-09-23T14:06:28.259Z,1537711588.259 [trackPatch:SurfaceCommsSplit:C:B] Stopped
2018-09-23T14:06:28.259Z,1537711588.259 [trackPatch:SurfaceCommsSplit:C:C] Running Loop=1
2018-09-23T14:06:28.570Z,1537711588.570 [trackPatch:SurfaceCommsSplit:C:C](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-23T14:06:31.710Z,1537711591.710 [NAL9602](INFO): Powering up
2018-09-23T14:06:42.634Z,1537711602.634 [NAL9602](INFO): NAL9602 initialized
2018-09-23T14:07:06.636Z,1537711626.636 [NAL9602](INFO): SBD MO Status=0, MOMSN=1280, MT Status=0, MTMSN=0
2018-09-23T14:07:06.636Z,1537711626.636 [NAL9602](INFO): No messages in MT queue
2018-09-23T14:10:05.914Z,1537711805.914 [NAL9602](INFO): GPS fix at 20180923T140955: (36.838734, -121.895533)
2018-09-23T14:10:05.970Z,1537711805.970 [trackPatch:SurfaceCommsSplit:C:C] Stopped
2018-09-23T14:10:05.971Z,1537711805.971 [trackPatch:SurfaceCommsSplit:C](INFO): Completed trackPatch:SurfaceCommsSplit:C
2018-09-23T14:10:05.971Z,1537711805.971 [trackPatch:SurfaceCommsSplit:C] Stopped
2018-09-23T14:10:05.971Z,1537711805.971 [trackPatch:SurfaceCommsSplit:C](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit:C
2018-09-23T14:10:05.972Z,1537711805.972 [trackPatch:SurfaceCommsSplit](INFO): Completed trackPatch:SurfaceCommsSplit
2018-09-23T14:10:05.972Z,1537711805.972 [trackPatch:SurfaceCommsSplit] Stopped
2018-09-23T14:10:05.972Z,1537711805.972 [trackPatch:SurfaceCommsSplit](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit
2018-09-23T14:10:05.972Z,1537711805.972 [trackPatch:SurfaceCommsSplit:A.GoToSurface] Stopped
2018-09-23T14:10:05.972Z,1537711805.972 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-23T14:10:05.977Z,1537711805.977 [trackPatch:PatchDetectHorizontal] Running Loop=1
2018-09-23T14:10:05.977Z,1537711805.977 [trackPatch:PatchDetectHorizontal](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal
2018-09-23T14:10:05.977Z,1537711805.977 [trackPatch:PatchDetectHorizontal:AssignPatchDetectOn] Running Loop=1
2018-09-23T14:10:06.395Z,1537711806.395 [trackPatch:PatchDetectHorizontal:AssignPatchDetectOn] Stopped
2018-09-23T14:10:06.395Z,1537711806.395 [trackPatch:PatchDetectHorizontal:C] Running Loop=1
2018-09-23T14:10:06.395Z,1537711806.395 [trackPatch:M.YoYo] Running Loop=1
2018-09-23T14:10:06.395Z,1537711806.395 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-23T14:10:06.401Z,1537711806.401 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-23T14:10:06.401Z,1537711806.401 [trackPatch:Science] Running Loop=1
2018-09-23T14:10:06.403Z,1537711806.403 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-23T14:10:06.403Z,1537711806.403 [trackPatch:Science:G] Running Loop=1
2018-09-23T14:10:06.404Z,1537711806.404 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-23T14:10:06.404Z,1537711806.404 [trackPatch:H.Pitch] Running Loop=1
2018-09-23T14:10:06.404Z,1537711806.404 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-23T14:10:06.409Z,1537711806.409 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-23T14:10:06.548Z,1537711806.548 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-23T14:10:06.548Z,1537711806.548 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-23T14:10:06.754Z,1537711806.754 [trackPatch:PatchDetectHorizontal:C](IMPORTANT): Next: bearing for CrossLeg: -90.000000 arcdeg . WpMaxDistance = 1000.000000 m . Current lat, lon = 36.838734 arcdeg , -121.895533 arcdeg .
2018-09-23T14:10:06.756Z,1537711806.756 [trackPatch:PatchDetectHorizontal:C] Stopped
2018-09-23T14:10:06.756Z,1537711806.756 [trackPatch:PatchDetectHorizontal:CrossLeg] Running Loop=1
2018-09-23T14:10:06.756Z,1537711806.756 [trackPatch:PatchDetectHorizontal:CrossLeg](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal:CrossLeg
2018-09-23T14:10:06.756Z,1537711806.756 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint] Running Loop=1
2018-09-23T14:10:06.756Z,1537711806.756 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-23T14:10:06.762Z,1537711806.762 [trackPatch:PatchDetectHorizontal:PatchDetection] Running Loop=1
2018-09-23T14:10:06.762Z,1537711806.762 [trackPatch:PatchDetectHorizontal:PatchDetection](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal:PatchDetection
2018-09-23T14:10:06.762Z,1537711806.762 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal] Running Loop=1
2018-09-23T14:10:06.762Z,1537711806.762 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](INFO): Initialize.
2018-09-23T14:10:07.198Z,1537711807.198 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint] Stopped
2018-09-23T14:10:07.198Z,1537711807.198 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-23T14:10:07.198Z,1537711807.198 [trackPatch:PatchDetectHorizontal:CrossLeg:B] Running Loop=1
2018-09-23T14:10:07.198Z,1537711807.198 [trackPatch:PatchDetectHorizontal:CrossLeg:B](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal:CrossLeg:B
2018-09-23T14:10:07.590Z,1537711807.590 [trackPatch:SurfaceComms] Running Loop=1
2018-09-23T14:10:07.590Z,1537711807.590 [trackPatch:SurfaceComms](DEBUG): Aggregate::initialize trackPatch:SurfaceComms
2018-09-23T14:10:07.590Z,1537711807.590 [trackPatch:SurfaceComms:SurfaceComms] Running Loop=1
2018-09-23T14:10:07.590Z,1537711807.590 [trackPatch:SurfaceComms:SurfaceComms](DEBUG): Aggregate::initialize trackPatch:SurfaceComms:SurfaceComms
2018-09-23T14:10:07.591Z,1537711807.591 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface] Running Loop=1
2018-09-23T14:10:07.591Z,1537711807.591 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T14:10:07.591Z,1537711807.591 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-23T14:10:07.591Z,1537711807.591 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-23T14:10:07.592Z,1537711807.592 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-23T14:10:07.592Z,1537711807.592 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T14:10:07.597Z,1537711807.597 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T14:10:07.615Z,1537711807.615 [trackPatch:SurfaceComms:SurfaceComms:B] Running Loop=1
2018-09-23T14:10:07.615Z,1537711807.615 [trackPatch:SurfaceComms:SurfaceComms:B](DEBUG): Aggregate::initialize trackPatch:SurfaceComms:SurfaceComms:B
2018-09-23T14:10:07.615Z,1537711807.615 [trackPatch:SurfaceComms:SurfaceComms:B:A] Running Loop=1
2018-09-23T14:10:07.974Z,1537711807.974 [trackPatch:SurfaceComms:SurfaceComms:B] Stopped
2018-09-23T14:10:07.975Z,1537711807.975 [trackPatch:SurfaceComms:SurfaceComms:B](DEBUG): Aggregate::uninitialize trackPatch:SurfaceComms:SurfaceComms:B
2018-09-23T14:10:07.975Z,1537711807.975 [trackPatch:SurfaceComms:SurfaceComms:B:A] Stopped
2018-09-23T14:10:07.975Z,1537711807.975 [trackPatch:SurfaceComms:SurfaceComms:C] Running Loop=1
2018-09-23T14:10:07.975Z,1537711807.975 [trackPatch:SurfaceComms:SurfaceComms:C](DEBUG): Aggregate::initialize trackPatch:SurfaceComms:SurfaceComms:C
2018-09-23T14:10:07.975Z,1537711807.975 [trackPatch:SurfaceComms:SurfaceComms:C:A] Running Loop=1
2018-09-23T14:10:08.391Z,1537711808.391 [trackPatch:M.YoYo] Preempted
2018-09-23T14:10:08.391Z,1537711808.391 [trackPatch:L.DepthEnvelope] Preempted
2018-09-23T14:10:08.391Z,1537711808.391 [trackPatch:K.SetSpeed] Preempted
2018-09-23T14:10:08.391Z,1537711808.391 [trackPatch:Science] Preempted
2018-09-23T14:10:08.391Z,1537711808.391 [trackPatch:Science:G] Preempted
2018-09-23T14:10:08.391Z,1537711808.391 [trackPatch:Science:Read_Oil] Preempted
2018-09-23T14:10:08.391Z,1537711808.391 [trackPatch:I.Buoyancy] Preempted
2018-09-23T14:10:08.391Z,1537711808.391 [trackPatch:H.Pitch] Preempted
2018-09-23T14:10:08.391Z,1537711808.391 [trackPatch:G.WaterDepthEnvelope] Preempted
2018-09-23T14:10:08.391Z,1537711808.391 [trackPatch:F.OffshoreEnvelope] Preempted
2018-09-23T14:10:08.393Z,1537711808.393 [trackPatch:SurfaceComms:SurfaceComms:C:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-23T14:10:08.720Z,1537711808.720 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-23T14:10:09.930Z,1537711809.930 [NAL9602](INFO): GPS fix at 20180923T140959: (36.838713, -121.895559)
2018-09-23T14:10:09.981Z,1537711809.981 [trackPatch:SurfaceComms:SurfaceComms:C:A] Stopped
2018-09-23T14:10:09.982Z,1537711809.982 [trackPatch:SurfaceComms:SurfaceComms:C:B] Running Loop=1
2018-09-23T14:10:10.401Z,1537711810.401 [trackPatch:SurfaceComms:SurfaceComms:C:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-23T14:10:14.509Z,1537711814.509 [DataOverHttps](INFO): Sending 64 bytes from file Logs/20180923T135420/Courier0016.lzma
2018-09-23T14:10:15.282Z,1537711815.282 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Courier0016.lzma.bak
2018-09-23T14:10:15.282Z,1537711815.282 [DataOverHttps](INFO): SBD MOMSN=8567298
2018-09-23T14:10:24.402Z,1537711824.402 [DataOverHttps](INFO): Sending 259 bytes from file Logs/20180923T135420/Express0017.lzma
2018-09-23T14:10:25.169Z,1537711825.169 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Express0017.lzma.bak
2018-09-23T14:10:25.169Z,1537711825.169 [DataOverHttps](INFO): SBD MOMSN=8567301
2018-09-23T14:10:25.701Z,1537711825.701 [trackPatch:SurfaceComms:SurfaceComms:C:B] Stopped
2018-09-23T14:10:25.701Z,1537711825.701 [trackPatch:SurfaceComms:SurfaceComms:C:C] Running Loop=1
2018-09-23T14:10:26.038Z,1537711826.038 [trackPatch:SurfaceComms:SurfaceComms:C:C](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-23T14:10:30.118Z,1537711830.118 [NAL9602](INFO): GPS fix at 20180923T141019: (36.838705, -121.895550)
2018-09-23T14:10:30.172Z,1537711830.172 [trackPatch:SurfaceComms:SurfaceComms:C:C] Stopped
2018-09-23T14:10:30.172Z,1537711830.172 [trackPatch:SurfaceComms:SurfaceComms:C](INFO): Completed trackPatch:SurfaceComms:SurfaceComms:C
2018-09-23T14:10:30.172Z,1537711830.172 [trackPatch:SurfaceComms:SurfaceComms:C] Stopped
2018-09-23T14:10:30.172Z,1537711830.172 [trackPatch:SurfaceComms:SurfaceComms:C](DEBUG): Aggregate::uninitialize trackPatch:SurfaceComms:SurfaceComms:C
2018-09-23T14:10:30.174Z,1537711830.174 [trackPatch:SurfaceComms:SurfaceComms](INFO): Completed trackPatch:SurfaceComms:SurfaceComms
2018-09-23T14:10:30.174Z,1537711830.174 [trackPatch:SurfaceComms:SurfaceComms] Stopped
2018-09-23T14:10:30.174Z,1537711830.174 [trackPatch:SurfaceComms:SurfaceComms](DEBUG): Aggregate::uninitialize trackPatch:SurfaceComms:SurfaceComms
2018-09-23T14:10:30.174Z,1537711830.174 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface] Stopped
2018-09-23T14:10:30.174Z,1537711830.174 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-23T14:10:30.174Z,1537711830.174 [trackPatch:SurfaceComms](INFO): Completed trackPatch:SurfaceComms
2018-09-23T14:10:30.174Z,1537711830.174 [trackPatch:SurfaceComms] Stopped
2018-09-23T14:10:30.175Z,1537711830.175 [trackPatch:SurfaceComms](DEBUG): Aggregate::uninitialize trackPatch:SurfaceComms
2018-09-23T14:10:30.585Z,1537711830.585 [trackPatch:PatchDetectHorizontal:CrossLeg:B](INFO): Completed trackPatch:PatchDetectHorizontal:CrossLeg:B
2018-09-23T14:10:30.585Z,1537711830.585 [trackPatch:PatchDetectHorizontal:CrossLeg:B] Stopped
2018-09-23T14:10:30.585Z,1537711830.585 [trackPatch:PatchDetectHorizontal:CrossLeg:B](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal:CrossLeg:B
2018-09-23T14:10:30.585Z,1537711830.585 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint] Running Loop=1
2018-09-23T14:10:30.585Z,1537711830.585 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-23T14:10:30.587Z,1537711830.587 [trackPatch:M.YoYo] Running Loop=1
2018-09-23T14:10:30.587Z,1537711830.587 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-23T14:10:30.588Z,1537711830.588 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-23T14:10:30.589Z,1537711830.589 [trackPatch:Science] Running Loop=1
2018-09-23T14:10:30.591Z,1537711830.591 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-23T14:10:30.591Z,1537711830.591 [trackPatch:Science:G] Running Loop=1
2018-09-23T14:10:30.591Z,1537711830.591 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-23T14:10:30.591Z,1537711830.591 [trackPatch:H.Pitch] Running Loop=1
2018-09-23T14:10:30.592Z,1537711830.592 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-23T14:10:30.592Z,1537711830.592 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-23T14:10:30.949Z,1537711830.949 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-23T14:10:30.949Z,1537711830.949 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-23T14:10:48.969Z,1537711848.969 [trackPatch](INFO): Timed out from 2018-09-23T14:00:48.7Z
2018-09-23T14:10:48.969Z,1537711848.969 [MissionManager](INFO): trackPatch is completed.
2018-09-23T14:10:48.969Z,1537711848.969 [MissionManager](INFO): Uninitializing Mission trackPatch
2018-09-23T14:10:48.970Z,1537711848.970 [trackPatch] Stopped
2018-09-23T14:10:48.970Z,1537711848.970 [trackPatch](DEBUG): Aggregate::uninitialize trackPatch
2018-09-23T14:10:48.970Z,1537711848.970 [trackPatch:A.AltitudeEnvelope] Stopped
2018-09-23T14:10:48.970Z,1537711848.970 [trackPatch:A.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-23T14:10:48.970Z,1537711848.970 [trackPatch:B.DepthEnvelope] Stopped
2018-09-23T14:10:48.970Z,1537711848.970 [trackPatch:B.DepthEnvelope](DEBUG): Uninitialize.
2018-09-23T14:10:48.970Z,1537711848.970 [trackPatch:F.OffshoreEnvelope] Stopped
2018-09-23T14:10:48.970Z,1537711848.970 [trackPatch:F.OffshoreEnvelope](DEBUG): Uninitialize OffshoreEnvelopeComponent.
2018-09-23T14:10:48.970Z,1537711848.970 [trackPatch:G.WaterDepthEnvelope] Stopped
2018-09-23T14:10:48.970Z,1537711848.970 [trackPatch:G.WaterDepthEnvelope](DEBUG): Uninitialize WaterDepthEnvelopeComponent.
2018-09-23T14:10:48.970Z,1537711848.970 [trackPatch:H.Pitch] Stopped
2018-09-23T14:10:48.971Z,1537711848.971 [trackPatch:I.Buoyancy] Stopped
2018-09-23T14:10:48.971Z,1537711848.971 [trackPatch:I.Buoyancy](DEBUG): Uninitialize Buoyancy Component.
2018-09-23T14:10:48.971Z,1537711848.971 [trackPatch:Science] Stopped
2018-09-23T14:10:48.971Z,1537711848.971 [trackPatch:Science](DEBUG): Aggregate::uninitialize trackPatch:Science
2018-09-23T14:10:48.971Z,1537711848.971 [trackPatch:Science:G] Stopped
2018-09-23T14:10:48.971Z,1537711848.971 [trackPatch:Science:Read_Oil] Stopped
2018-09-23T14:10:48.971Z,1537711848.971 [trackPatch:Science:PeakDetectChl] Stopped
2018-09-23T14:10:48.971Z,1537711848.971 [trackPatch:Science:PeakDetectChl](DEBUG): Aggregate::uninitialize trackPatch:Science:PeakDetectChl
2018-09-23T14:10:48.971Z,1537711848.971 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2018-09-23T14:10:48.971Z,1537711848.971 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-23T14:10:48.971Z,1537711848.971 [trackPatch:K.SetSpeed] Stopped
2018-09-23T14:10:48.972Z,1537711848.972 [trackPatch:K.SetSpeed](DEBUG): Uninitialize.
2018-09-23T14:10:48.972Z,1537711848.972 [trackPatch:L.DepthEnvelope] Stopped
2018-09-23T14:10:48.972Z,1537711848.972 [trackPatch:L.DepthEnvelope](DEBUG): Uninitialize.
2018-09-23T14:10:48.972Z,1537711848.972 [trackPatch:M.YoYo] Stopped
2018-09-23T14:10:48.972Z,1537711848.972 [trackPatch:M.YoYo](DEBUG): Uninitialize YoYoComponent.
2018-09-23T14:10:48.972Z,1537711848.972 [trackPatch:PatchDetectHorizontal] Stopped
2018-09-23T14:10:48.972Z,1537711848.972 [trackPatch:PatchDetectHorizontal](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal
2018-09-23T14:10:48.972Z,1537711848.972 [trackPatch:PatchDetectHorizontal:PatchDetection] Stopped
2018-09-23T14:10:48.972Z,1537711848.972 [trackPatch:PatchDetectHorizontal:PatchDetection](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal:PatchDetection
2018-09-23T14:10:48.972Z,1537711848.972 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal] Stopped
2018-09-23T14:10:48.973Z,1537711848.973 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-23T14:10:48.977Z,1537711848.977 [trackPatch:PatchDetectHorizontal:CrossLeg] Stopped
2018-09-23T14:10:48.977Z,1537711848.977 [trackPatch:PatchDetectHorizontal:CrossLeg](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal:CrossLeg
2018-09-23T14:10:48.977Z,1537711848.977 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint] Stopped
2018-09-23T14:10:48.977Z,1537711848.977 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-23T14:10:49.301Z,1537711849.301 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-23T14:10:49.376Z,1537711849.376 [MissionManager](IMPORTANT): Started mission Default
2018-09-23T14:10:49.376Z,1537711849.376 [Default] Running Loop=1
2018-09-23T14:10:49.376Z,1537711849.376 [Default](DEBUG): Aggregate::initialize Default
2018-09-23T14:10:49.376Z,1537711849.376 [Default:B.GoToSurface] Running Loop=1
2018-09-23T14:10:49.377Z,1537711849.377 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T14:10:49.377Z,1537711849.377 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-23T14:10:49.378Z,1537711849.378 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-23T14:10:49.378Z,1537711849.378 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-23T14:10:49.378Z,1537711849.378 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T14:10:49.379Z,1537711849.379 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T14:10:49.379Z,1537711849.379 [Default:A.Wait] Running Loop=1
2018-09-23T14:10:49.379Z,1537711849.379 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-23T14:11:02.507Z,1537711862.507 [NAL9602](INFO): Powering down
2018-09-23T14:11:02.585Z,1537711862.585 [Default:A.Wait](INFO): Done Waiting.
2018-09-23T14:11:02.586Z,1537711862.586 [Default:A.Wait] Stopped
2018-09-23T14:11:02.586Z,1537711862.586 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-23T14:11:02.962Z,1537711862.962 [Default:CheckIn] Running Loop=1
2018-09-23T14:11:02.962Z,1537711862.962 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-23T14:11:02.962Z,1537711862.962 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-23T14:11:03.705Z,1537711863.705 [NAL9602](INFO): Powering up
2018-09-23T14:11:14.907Z,1537711874.907 [NAL9602](INFO): NAL9602 initialized
2018-09-23T14:11:31.700Z,1537711891.700 [NAL9602](INFO): SBD MO Status=0, MOMSN=1281, MT Status=0, MTMSN=0
2018-09-23T14:11:31.700Z,1537711891.700 [NAL9602](INFO): No messages in MT queue
2018-09-23T14:11:56.096Z,1537711916.096 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T14:12:40.915Z,1537711960.915 [NAL9602](INFO): GPS fix at 20180923T141230: (36.839011, -121.895169)
2018-09-23T14:12:40.954Z,1537711960.954 [Default:CheckIn:Read_GPS] Stopped
2018-09-23T14:12:40.955Z,1537711960.955 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-23T14:12:56.496Z,1537711976.496 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T14:13:12.903Z,1537711992.903 [NAL9602](INFO): Powering down
2018-09-23T14:13:27.297Z,1537712007.297 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T14:13:30.110Z,1537712010.110 [DataOverHttps](INFO): setting unavailable, lastComms_.elapsed()=180.006821
2018-09-23T14:13:30.115Z,1537712010.115 [NAL9602](INFO): Powering up
2018-09-23T14:13:41.311Z,1537712021.311 [NAL9602](INFO): NAL9602 initialized
2018-09-23T14:13:54.624Z,1537712034.624 [NAL9602](INFO): SBD MO Status=1, MOMSN=1282, MT Status=0, MTMSN=0
2018-09-23T14:13:54.677Z,1537712034.677 [NAL9602](INFO): Sent 64 bytes from file Logs/20180923T135420/Courier0019.lzma
2018-09-23T14:13:54.677Z,1537712034.677 [NAL9602](INFO): Packets left to send: 0
2018-09-23T14:13:54.679Z,1537712034.679 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180923T135420/Courier0019.lzma.parts/0000.sbd
2018-09-23T14:13:54.679Z,1537712034.679 [NAL9602](DEBUG): Completed sending Logs/20180923T135420/Courier0019.lzma
2018-09-23T14:14:00.740Z,1537712040.740 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T14:14:05.152Z,1537712045.152 [NAL9602](INFO): SBD MO Status=1, MOMSN=1283, MT Status=0, MTMSN=0
2018-09-23T14:14:05.202Z,1537712045.202 [NAL9602](INFO): Sent 138 bytes from file Logs/20180923T135420/Express0020.lzma
2018-09-23T14:14:05.202Z,1537712045.202 [NAL9602](INFO): Packets left to send: 0
2018-09-23T14:14:05.203Z,1537712045.203 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180923T135420/Express0020.lzma.parts/0000.sbd
2018-09-23T14:14:05.204Z,1537712045.204 [NAL9602](DEBUG): Completed sending Logs/20180923T135420/Express0020.lzma
2018-09-23T14:14:16.352Z,1537712056.352 [NAL9602](INFO): SBD MO Status=0, MOMSN=1284, MT Status=0, MTMSN=0
2018-09-23T14:14:16.460Z,1537712056.460 [Default:CheckIn:Read_Iridium] Stopped
2018-09-23T14:14:16.460Z,1537712056.460 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-23T14:14:16.460Z,1537712056.460 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-23T14:14:47.150Z,1537712087.150 [NAL9602](INFO): Powering down
2018-09-23T14:15:00.740Z,1537712100.740 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T14:16:00.740Z,1537712160.740 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T14:16:36.063Z,1537712196.063 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.002721
2018-09-23T14:19:16.856Z,1537712356.856 [Default:CheckIn:C.Wait](INFO): Done Waiting.
2018-09-23T14:19:16.856Z,1537712356.856 [Default:CheckIn:C.Wait] Stopped
2018-09-23T14:19:16.856Z,1537712356.856 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-23T14:19:16.861Z,1537712356.861 [Default:CheckIn:D] Running Loop=1
2018-09-23T14:19:17.298Z,1537712357.298 [Default:CheckIn:D] Stopped
2018-09-23T14:19:17.298Z,1537712357.298 [Default:CheckIn:E] Running Loop=1
2018-09-23T14:19:17.660Z,1537712357.660 [Default:CheckIn:E](IMPORTANT): Default mission has been running for 8.465128 min 
2018-09-23T14:19:17.670Z,1537712357.670 [Default:CheckIn:E] Stopped
2018-09-23T14:19:17.670Z,1537712357.670 [Default:CheckIn](INFO): Completed Default:CheckIn
2018-09-23T14:19:17.670Z,1537712357.670 [Default:CheckIn] Stopped
2018-09-23T14:19:17.670Z,1537712357.670 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-23T14:19:17.670Z,1537712357.670 [Default:CheckIn](INFO): Running loop #2
2018-09-23T14:19:17.670Z,1537712357.670 [Default:CheckIn] Running Loop=2
2018-09-23T14:19:17.670Z,1537712357.670 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-23T14:19:17.671Z,1537712357.671 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-23T14:19:18.414Z,1537712358.414 [NAL9602](INFO): Powering up
2018-09-23T14:19:29.214Z,1537712369.214 [NAL9602](INFO): NAL9602 initialized
2018-09-23T14:19:36.234Z,1537712376.234 [DataOverHttps](IMPORTANT): SBD MTMSN=20180923T141926
2018-09-23T14:19:40.418Z,1537712380.418 [NAL9602](INFO): SBD MO Status=0, MOMSN=1285, MT Status=0, MTMSN=0
2018-09-23T14:19:40.419Z,1537712380.419 [NAL9602](INFO): No messages in MT queue
2018-09-23T14:19:40.801Z,1537712380.801 [DataOverHttps](INFO): Received command:load Science/trackPatch.xml;set trackPatch.MissionTimeout 20 min;set trackPatch.YoYoMinDepth 2 m;set trackPatch.YoYoMaxDepth 10 m;set trackPatch.PeakChlShallowBnd 3 m;set trackPatch.PeakChlDeepBnd 8 m;run
2018-09-23T14:19:40.816Z,1537712380.816 [CommandLine](IMPORTANT): got command load ./Missions/Science/trackPatch.xml
2018-09-23T14:19:40.818Z,1537712380.818 [MissionManager](INFO): Loading Mission: ./Missions/Science/trackPatch.xml
2018-09-23T14:19:41.049Z,1537712381.049 [MissionManager](INFO): DefineArg trackPatch.MinAltitude = 5.000000 m
2018-09-23T14:19:41.052Z,1537712381.052 [MissionManager](INFO): DefineArg trackPatch.MaxDepth = 65.000000 m
2018-09-23T14:19:41.054Z,1537712381.054 [MissionManager](INFO): DefineArg trackPatch.MinWaterDepth = 10.000000 m
2018-09-23T14:19:41.056Z,1537712381.056 [MissionManager](INFO): DefineArg trackPatch.MinOffshore = 2000.000000 m
2018-09-23T14:19:41.058Z,1537712381.058 [MissionManager](INFO): DefineArg trackPatch.NeedCommsTime = 180.000000 min
2018-09-23T14:19:41.061Z,1537712381.061 [MissionManager](INFO): DefineArg trackPatch.MissionTimeout = 56.000000 h
2018-09-23T14:19:41.063Z,1537712381.063 [MissionManager](INFO): DefineArg trackPatch.MassDefault = 0.000000 cm
2018-09-23T14:19:41.066Z,1537712381.066 [MissionManager](INFO): DefineArg trackPatch.BuoyancyNeutral = 205.000004 cc
2018-09-23T14:19:41.068Z,1537712381.068 [MissionManager](INFO): DefineArg trackPatch.YoYoMinDepth = 2.000000 m
2018-09-23T14:19:41.074Z,1537712381.074 [MissionManager](INFO): DefineArg trackPatch.YoYoMaxDepth = 10.000000 m
2018-09-23T14:19:41.076Z,1537712381.076 [MissionManager](INFO): DefineArg trackPatch.YoYoUpPitch = 20.000000 arcdeg
2018-09-23T14:19:41.107Z,1537712381.107 [MissionManager](INFO): DefineArg trackPatch.YoYoDownPitch = -20.000000 arcdeg
2018-09-23T14:19:41.113Z,1537712381.113 [MissionManager](INFO): DefineArg trackPatch.Speed = 1.000000 m/s
2018-09-23T14:19:41.115Z,1537712381.115 [MissionManager](INFO): DefineArg trackPatch.WpMaxDistance = 1000.000000 m
2018-09-23T14:19:41.122Z,1537712381.122 [MissionManager](INFO): DefineArg trackPatch.WpTimeout = 8000.000000 s
2018-09-23T14:19:41.124Z,1537712381.124 [MissionManager](INFO): DefineArg trackPatch.WaterFrame = 1 bool
2018-09-23T14:19:41.126Z,1537712381.126 [MissionManager](INFO): DefineArg trackPatch.Repeat = 20.000000 count
2018-09-23T14:19:41.128Z,1537712381.128 [MissionManager](INFO): DefineArg trackPatch.Turn = 90.000000 arcdeg
2018-09-23T14:19:41.143Z,1537712381.143 [MissionManager](INFO): DefineArg trackPatch.Reverse = 180.000000 arcdeg
2018-09-23T14:19:41.149Z,1537712381.149 [MissionManager](INFO): DefineArg trackPatch.TwoPi = 360.000000 arcdeg
2018-09-23T14:19:41.152Z,1537712381.152 [MissionManager](INFO): DefineArg trackPatch.LowPassWindowLen = 20.000000 count
2018-09-23T14:19:41.162Z,1537712381.162 [MissionManager](INFO): DefineArg trackPatch.PeakChlShallowBnd = 3.000000 m
2018-09-23T14:19:41.164Z,1537712381.164 [MissionManager](INFO): DefineArg trackPatch.PeakChlDeepBnd = 8.000000 m
2018-09-23T14:19:41.171Z,1537712381.171 [MissionManager](INFO): DefineArg trackPatch.FilterWidth = 4.000000 count
2018-09-23T14:19:41.177Z,1537712381.177 [MissionManager](INFO): DefineArg trackPatch.BeginThreshold = nan ug/l
2018-09-23T14:19:41.179Z,1537712381.179 [MissionManager](INFO): DefineArg trackPatch.OffPeakFraction = 80.000000 %
2018-09-23T14:19:41.182Z,1537712381.182 [MissionManager](INFO): DefineArg trackPatch.PatchMode = 0 bool
2018-09-23T14:19:41.184Z,1537712381.184 [MissionManager](INFO): DefineArg trackPatch.WpBearing = -90.000000 arcdeg
2018-09-23T14:19:41.205Z,1537712381.204 [MissionManager](INFO): DefineOutput trackPatch.PatchDetectOn = 0 bool
2018-09-23T14:19:41.207Z,1537712381.207 [MissionManager](INFO): DefineOutput trackPatch.WpDone = 0 bool
2018-09-23T14:19:41.209Z,1537712381.209 [MissionManager](INFO): DefineOutput trackPatch.PatchChl = nan ug/l
2018-09-23T14:19:41.211Z,1537712381.211 [MissionManager](INFO): DefineOutput trackPatch.PatchChlDepth = nan m
2018-09-23T14:19:41.230Z,1537712381.230 [MissionManager](INFO): DefineOutput trackPatch.PatchChlLatitude = nan arcdeg
2018-09-23T14:19:41.232Z,1537712381.232 [MissionManager](INFO): DefineOutput trackPatch.PatchChlLongitude = nan arcdeg
2018-09-23T14:19:41.235Z,1537712381.235 [MissionManager](INFO): DefineOutput trackPatch.PatchChlDistance = 0.000000 m
2018-09-23T14:19:41.236Z,1537712381.236 [trackPatch:A.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-23T14:19:41.240Z,1537712381.240 [trackPatch:B.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-23T14:19:41.261Z,1537712381.261 [MissionManager](INFO): Inserting Stack: Missions/Insert/Surface.xml
2018-09-23T14:19:41.335Z,1537712381.335 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.SurfaceDepthRate = nan m/s
2018-09-23T14:19:41.338Z,1537712381.338 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.SurfacePitch = 20.000000 arcdeg
2018-09-23T14:19:41.340Z,1537712381.340 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.SurfaceSpeed = 1.000000 m/s
2018-09-23T14:19:41.343Z,1537712381.343 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.IridiumTimeout = 30.000000 min
2018-09-23T14:19:41.345Z,1537712381.345 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.UnpackSplitAtSurface = 0 bool
2018-09-23T14:19:41.379Z,1537712381.379 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-23T14:19:41.404Z,1537712381.404 [MissionManager](INFO): RedefineArg trackPatch:SurfaceCommsSplit.SurfacePitch = value:20.000000 arcdeg
2018-09-23T14:19:41.406Z,1537712381.406 [MissionManager](INFO): RedefineArg trackPatch:SurfaceCommsSplit.SurfaceSpeed = value:1.000000 m/s
2018-09-23T14:19:41.408Z,1537712381.408 [MissionManager](INFO): RedefineArg trackPatch:SurfaceCommsSplit.UnpackSplitAtSurface = value:1 bool
2018-09-23T14:19:41.423Z,1537712381.423 [MissionManager](INFO): Inserting Stack: Missions/Insert/Surface.xml
2018-09-23T14:19:41.477Z,1537712381.477 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.SurfaceDepthRate = nan m/s
2018-09-23T14:19:41.480Z,1537712381.480 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.SurfacePitch = 20.000000 arcdeg
2018-09-23T14:19:41.482Z,1537712381.482 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.SurfaceSpeed = 1.000000 m/s
2018-09-23T14:19:41.484Z,1537712381.484 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.IridiumTimeout = 30.000000 min
2018-09-23T14:19:41.486Z,1537712381.486 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.UnpackSplitAtSurface = 0 bool
2018-09-23T14:19:41.487Z,1537712381.487 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-23T14:19:41.498Z,1537712381.498 [MissionManager](INFO): RedefineArg trackPatch:SurfaceComms:SurfaceComms.SurfacePitch = value:20.000000 arcdeg
2018-09-23T14:19:41.500Z,1537712381.500 [MissionManager](INFO): RedefineArg trackPatch:SurfaceComms:SurfaceComms.SurfaceSpeed = value:1.000000 m/s
2018-09-23T14:19:41.506Z,1537712381.506 [trackPatch:F.OffshoreEnvelope](DEBUG): Construct OffshoreEnvelope.
2018-09-23T14:19:41.510Z,1537712381.510 [trackPatch:G.WaterDepthEnvelope](DEBUG): Construct WaterDepthEnvelope.
2018-09-23T14:19:41.514Z,1537712381.514 [trackPatch:H.Pitch](DEBUG): Construct.
2018-09-23T14:19:41.548Z,1537712381.548 [trackPatch:I.Buoyancy](DEBUG): Construct Buoyancy.
2018-09-23T14:19:41.550Z,1537712381.550 [MissionManager](INFO): Inserting Stack: Missions/Insert/Science.xml
2018-09-23T14:19:41.697Z,1537712381.697 [MissionManager](INFO): DefineArg trackPatch:Science.SampleISUS = 0 bool
2018-09-23T14:19:41.699Z,1537712381.699 [MissionManager](INFO): DefineArg trackPatch:Science.SampleISUSmaxPitch = 60.000000 arcdeg
2018-09-23T14:19:41.701Z,1537712381.701 [MissionManager](INFO): DefineArg trackPatch:Science.SampleISUSminPitch = -60.000000 arcdeg
2018-09-23T14:19:41.703Z,1537712381.703 [MissionManager](INFO): DefineArg trackPatch:Science.PeakDetectChlActive = 0 bool
2018-09-23T14:19:41.705Z,1537712381.705 [MissionManager](INFO): DefineArg trackPatch:Science.HighestChlPeakReportActive = 0 bool
2018-09-23T14:19:41.707Z,1537712381.707 [MissionManager](INFO): DefineArg trackPatch:Science.PatchTracking = 1 bool
2018-09-23T14:19:41.709Z,1537712381.709 [MissionManager](INFO): DefineArg trackPatch:Science.FilterWidthHorizontal = 3.000000 count
2018-09-23T14:19:41.711Z,1537712381.711 [MissionManager](INFO): DefineArg trackPatch:Science.NumProfilesSlidingwindow = 100.000000 count
2018-09-23T14:19:41.713Z,1537712381.713 [MissionManager](INFO): DefineArg trackPatch:Science.OffPeakFractionHorizontal = 80.000000 %
2018-09-23T14:19:41.715Z,1537712381.715 [MissionManager](INFO): DefineArg trackPatch:Science.PeakDetectNO3Active = 0 bool
2018-09-23T14:19:41.717Z,1537712381.717 [MissionManager](INFO): DefineArg trackPatch:Science.PeakDetectOilActive = 0 bool
2018-09-23T14:19:41.719Z,1537712381.719 [MissionManager](INFO): DefineArg trackPatch:Science.UpwardDerivativeOfTemperatureActive = 0 bool
2018-09-23T14:19:41.754Z,1537712381.754 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledAanderaaO2 = 0.000000 bool
2018-09-23T14:19:41.757Z,1537712381.757 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledNeilBrown = 0.000000 bool
2018-09-23T14:19:41.759Z,1537712381.759 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledSeabird = 0.000000 bool
2018-09-23T14:19:41.762Z,1537712381.762 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledTurbulence_NPS = 0.000000 bool
2018-09-23T14:19:41.764Z,1537712381.764 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledWetLabsBB2FL = 1.000000 bool
2018-09-23T14:19:41.787Z,1537712381.787 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledWetLabsSeaOWL_UV_A = 1.000000 bool
2018-09-23T14:19:41.789Z,1537712381.789 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledISUS = 0.000000 bool
2018-09-23T14:19:41.791Z,1537712381.791 [MissionManager](INFO): DefineArg trackPatch:Science.LowPassWindowLength = 20.000000 count
2018-09-23T14:19:41.809Z,1537712381.809 [MissionManager](INFO): DefineArg trackPatch:Science.PeakChlShallowBound = 10.000000 m
2018-09-23T14:19:41.811Z,1537712381.811 [MissionManager](INFO): DefineArg trackPatch:Science.PeakChlDeepBound = 20.000000 m
2018-09-23T14:19:41.813Z,1537712381.813 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChl = 0.000000 ug/l
2018-09-23T14:19:41.816Z,1537712381.816 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlDepth = 0.000000 m
2018-09-23T14:19:41.832Z,1537712381.832 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlTemperature = 0.000000 degC
2018-09-23T14:19:41.835Z,1537712381.835 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlLatitude = nan arcdeg
2018-09-23T14:19:41.837Z,1537712381.837 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlLongitude = nan arcdeg
2018-09-23T14:19:41.839Z,1537712381.839 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3 = 0.000000 umol/l
2018-09-23T14:19:41.861Z,1537712381.861 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3Depth = 0.000000 m
2018-09-23T14:19:41.864Z,1537712381.864 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3Latitude = nan arcdeg
2018-09-23T14:19:41.884Z,1537712381.884 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3Longitude = nan arcdeg
2018-09-23T14:19:41.887Z,1537712381.887 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChl = 0.000000 m
2018-09-23T14:19:41.889Z,1537712381.889 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlDepth = 0.000000 m
2018-09-23T14:19:41.891Z,1537712381.891 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlLatitude = nan arcdeg
2018-09-23T14:19:41.914Z,1537712381.914 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlLongitude = nan arcdeg
2018-09-23T14:19:41.916Z,1537712381.916 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlDistance = nan m
2018-09-23T14:19:41.919Z,1537712381.919 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOil = 0.000000 kg/m3
2018-09-23T14:19:41.921Z,1537712381.921 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOilDepth = 0.000000 m
2018-09-23T14:19:41.923Z,1537712381.923 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOilLatitude = nan arcdeg
2018-09-23T14:19:41.947Z,1537712381.947 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOilLongitude = nan arcdeg
2018-09-23T14:19:41.975Z,1537712381.975 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-23T14:19:42.002Z,1537712382.002 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-23T14:19:42.035Z,1537712382.035 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-23T14:19:42.044Z,1537712382.044 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-23T14:19:42.052Z,1537712382.052 [MissionManager](INFO): RedefineArg trackPatch:Science.PeakDetectChlActive = value:1 bool
2018-09-23T14:19:42.054Z,1537712382.054 [MissionManager](INFO): RedefineArg trackPatch:Science.PatchTracking = value:1 bool
2018-09-23T14:19:42.055Z,1537712382.055 [MissionManager](INFO): RedefineArg trackPatch:Science.LowPassWindowLength = reader:trackPatch.LowPassWindowLen
2018-09-23T14:19:42.056Z,1537712382.056 [MissionManager](INFO): RedefineArg trackPatch:Science.PeakChlShallowBound = reader:trackPatch.PeakChlShallowBnd
2018-09-23T14:19:42.058Z,1537712382.058 [MissionManager](INFO): RedefineArg trackPatch:Science.PeakChlDeepBound = reader:trackPatch.PeakChlDeepBnd
2018-09-23T14:19:42.059Z,1537712382.059 [MissionManager](INFO): RedefineArg trackPatch:Science.OffPeakFractionHorizontal = reader:trackPatch.OffPeakFraction
2018-09-23T14:19:42.060Z,1537712382.060 [trackPatch:K.SetSpeed](DEBUG): Construct.
2018-09-23T14:19:42.063Z,1537712382.063 [trackPatch:L.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-23T14:19:42.070Z,1537712382.070 [trackPatch:M.YoYo](DEBUG): Construct YoYo.
2018-09-23T14:19:42.077Z,1537712382.077 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-23T14:19:42.138Z,1537712382.138 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-23T14:19:42.144Z,1537712382.144 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-23T14:19:42.160Z,1537712382.160 [trackPatch:PatchDetectHorizontal:InLegWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-23T14:19:42.175Z,1537712382.175 [trackPatch:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-23T14:19:42.232Z,1537712382.232 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Trigger="Tethys/Trigger" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Trigger http://okeanids.mbari.org/tethys/Xml/Trigger.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="trackPatch">

    <Description>
        Vehicle runs yo-yos, with patch detect enabled for cholorphyll
        concentration.
    </Description>

<!-- Vehicle safety parameters -->

    <DefineArg Name="MinAltitude"><Description>
        Minimum altitude for the entire mission.
    </Description><Units:meter/><Value>5</Value></DefineArg>

    <DefineArg Name="MaxDepth"><Description>
        Maximum depth for the entire mission.
    </Description><Units:meter/><Value>65</Value></DefineArg>

    <DefineArg Name="MinWaterDepth"><Description>
        Minimum water depth for the entire mission.
    </Description><Units:meter/><Value>10</Value></DefineArg>

    <DefineArg Name="MinOffshore"><Description>
        Minimum offshore distance for the entire mission.
    </Description><Units:meter/><Value>2000</Value></DefineArg>

    <DefineArg Name="NeedCommsTime"><Description>
        Maximum time between surfacings for communications
    </Description><Units:minute/><Value>180</Value></DefineArg>

    <DefineArg Name="MissionTimeout"><Description>
        Timeout for the entire mission
    </Description><Units:hour/><Value>56</Value></DefineArg>

    <DefineArg Name="MassDefault"><Description>
        Static setting for mass during the mission. Defaults to massDefault
        setting in the Config/Control.cfg file.
    </Description><Control:VerticalControl.massDefault/></DefineArg>

    <DefineArg Name="BuoyancyNeutral"><Description>
        Buoyancy bladder position while performing the YoYo behavior. Defaults
        to buoyancyNeutral setting in the Config/Control.cfg file.
    </Description><Control:VerticalControl.buoyancyNeutral/></DefineArg>

<!-- Basic guidance settings -->

    <DefineArg Name="YoYoMinDepth"><Description>
        Minimum depth during yo-yo's.
    </Description><Units:meter/><Value>2.0</Value></DefineArg>

    <DefineArg Name="YoYoMaxDepth"><Description>
        Maximum depth during yo-yo's.
    </Description><Units:meter/><Value>10.0</Value></DefineArg>

    <DefineArg Name="YoYoUpPitch"><Description>
        Pitch when yo-yo's are ascending.
    </Description><Units:degree/><Value>20.0</Value></DefineArg>

    <DefineArg Name="YoYoDownPitch"><Description>
        Pitch when yo-yo's are descending.
    </Description><Units:degree/><Value>-20.0</Value></DefineArg>

    <DefineArg Name="Speed"><Description>
        Vehicle speed.
    </Description><Units:meter_per_second/><Value>1</Value></DefineArg>

    <DefineArg Name="WpMaxDistance"><Description>
        Maximum length of each tracking leg
<!--debug
    </Description><Units:meter/><Value>7500</Value></DefineArg>
-->
    </Description><Units:meter/><Value>1000</Value></DefineArg>

    <DefineArg Name="WpTimeout"><Description>
        Maximum duration of each tracking leg
    </Description><Units:second/><Value>8000</Value></DefineArg>

    <DefineArg Name="WaterFrame"><Description>
        Set WaterFrame true to drive towards waypoints in the water frame of
        reference
    </Description><True/></DefineArg>

    <DefineArg Name="Repeat"><Description>
        Maximum number of tracking legs
    </Description><Units:count/><Value>20</Value></DefineArg>

<!-- Constant settings for each tracking leg -->

    <DefineArg Name="Turn"><Description>
        Amount to turn at each leg
    </Description><Units:degree/><Value>90</Value></DefineArg>

    <DefineArg Name="Reverse"><Description>
        Change in bearing which reverses vehicle direction
    </Description><Units:degree/><Value>180</Value></DefineArg>

    <DefineArg Name="TwoPi"><Description>
        Applied to stop run-up of angles
    </Description><Units:degree/><Value>360</Value></DefineArg>

    <DefineArg Name="LowPassWindowLen"><Description>
        Low-pass window length (based on depth sensor sampling interval 0.4
        second) for low-pass filtering.
    </Description><Units:count/><Value>20</Value></DefineArg>

    <DefineArg Name="PeakChlShallowBnd"><Description>
        Shallow depth bound for detecting chl peak on each descent or ascent
        profile.
<!--debug
    </Description><Units:meter/><Value>NaN</Value></DefineArg>
-->
    </Description><Units:meter/><Value>3</Value></DefineArg>

    <DefineArg Name="PeakChlDeepBnd"><Description>
        Deep depth bound for detecting chl peak on each descent or ascent
        profile.
<!--debug
    </Description><Units:meter/><Value>NaN</Value></DefineArg>
-->
    </Description><Units:meter/><Value>8</Value></DefineArg>

    <DefineArg Name="FilterWidth"><Description>
        Width of boxcar filter used in horizontal patch detection
    </Description><Units:count/><Value>4</Value></DefineArg>

    <DefineArg Name="BeginThreshold"><Description>
        If non-NaN, sets threshold for starting horizontal patch detection
    </Description><Units:microgram_per_liter/><Value>NaN</Value></DefineArg>

    <DefineArg Name="OffPeakFraction"><Description>
        When filtered horizontal value is this fraction of the peak, consider it
        outside the patch.
    </Description><Units:percent/><Value>80</Value></DefineArg>

    <DefineArg Name="PatchMode"><Description>
        If true, use center of "in peak" range as the turn-around point. If
        false use maximum horizontal peak location as the turn-around point.
    </Description><False/></DefineArg>

<!-- Variable Settings for each tracking leg -->

    <DefineArg Name="WpBearing"><Description>
        Bearing being followed in the current leg. Set this to initialize start
        direction of patch tracking.
    </Description><Units:degree/><Value>-90</Value></DefineArg>

    <DefineOutput Name="PatchDetectOn"><Description>
        Mission sets this to true when the patch has been crossed.
    </Description><False/></DefineOutput>

    <DefineOutput Name="WpDone"><Description>
        Mission sets this to true when the cross-patch waypoint has been
        reached.
    </Description><False/></DefineOutput>

    <DefineOutput Name="PatchChl"><Units:microgram_per_liter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlDepth"><Units:meter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlDistance"><Units:meter/><Value>0</Value></DefineOutput>

<!-- The timeout -->

    <Timeout Duration="MissionTimeout"/>

<!-- And now the mission -->

    <Guidance:AltitudeEnvelope>
        <Parallel/>
        <Setting><Guidance:AltitudeEnvelope.minAltitude/><Arg Name="MinAltitude"/></Setting>
    </Guidance:AltitudeEnvelope>

    <Guidance:DepthEnvelope>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="MaxDepth"/></Setting>
    </Guidance:DepthEnvelope>

    <Insert Filename="Insert/Surface.xml" Id="SurfaceCommsSplit">
        <RedefineArg Name="SurfacePitch"><Units:degree/><Value>20</Value></RedefineArg>
        <RedefineArg Name="SurfaceSpeed"><Units:meter_per_second/><Value>1</Value></RedefineArg>
        <RedefineArg Name="UnpackSplitAtSurface"><True/></RedefineArg>
    </Insert>

    <Aggregate Id="SurfaceComms">

        <When>
            <Called/>
        </When>

        <Insert Filename="Insert/Surface.xml">
            <RedefineArg Name="SurfacePitch"><Units:degree/><Value>20</Value></RedefineArg>
            <RedefineArg Name="SurfaceSpeed"><Units:meter_per_second/><Value>1</Value></RedefineArg>
        </Insert>

    </Aggregate>

<!-- GPS Update.  Don't go too long w/o a GPS fix. -->

    <Aggregate Id="NeedComms">

        <When>
            <Universal:platform_pitch_angle/>
            <Gt><Units:degree/><Value>0</Value></Gt>
            <And><Elapsed><Universal:time_fix/></Elapsed><Gt><Arg Name="NeedCommsTime"/></Gt></And>
            <Or><Elapsed><Universal:time_fix/></Elapsed><Gt><Arg Name="NeedCommsTime"/><Add><Units:minute/><Value>10</Value></Add></Gt></Or>
        </When>

        <Syslog Severity="Important">NeedComms Timeout Surfacing</Syslog>

        <Call RefId="SurfaceComms"/>

    </Aggregate>

    <Guidance:OffshoreEnvelope>
        <Parallel/>
        <Setting><Guidance:OffshoreEnvelope.minOffshore/><Arg Name="MinOffshore"/></Setting>
    </Guidance:OffshoreEnvelope>

    <Guidance:WaterDepthEnvelope>
        <Parallel/>
        <Setting><Guidance:WaterDepthEnvelope.minWaterDepth/><Arg Name="MinWaterDepth"/></Setting>
    </Guidance:WaterDepthEnvelope>

    <Guidance:Pitch>
        <Parallel/>
        <Setting><Guidance:Pitch.massPosition/><Arg Name="MassDefault"/></Setting>
    </Guidance:Pitch>

    <Guidance:Buoyancy>
        <Parallel/>
        <Setting><Guidance:Buoyancy.position /><Arg Name="BuoyancyNeutral"/></Setting>
    </Guidance:Buoyancy>

<!-- If we're executing here or below, lets' get science data! -->

    <Insert Filename="Insert/Science.xml">
        <RedefineArg Name="PeakDetectChlActive"><True/></RedefineArg>
        <RedefineArg Name="PatchTracking"><True/></RedefineArg>
        <RedefineArg Name="LowPassWindowLength"><Arg Name="LowPassWindowLen"/></RedefineArg>
        <RedefineArg Name="PeakChlShallowBound"><Arg Name="PeakChlShallowBnd"/></RedefineArg>
        <RedefineArg Name="PeakChlDeepBound"><Arg Name="PeakChlDeepBnd"/></RedefineArg>
        <RedefineArg Name="OffPeakFractionHorizontal"><Arg Name="OffPeakFraction"/></RedefineArg>
    </Insert>

    <Guidance:SetSpeed>
        <Parallel/>
        <Setting><Guidance:SetSpeed.speed/><Arg Name="Speed"/></Setting>
    </Guidance:SetSpeed>

    <Guidance:DepthEnvelope>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.minDepth/><Arg Name="YoYoMinDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="YoYoMaxDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:DepthEnvelope.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:DepthEnvelope>

    <Guidance:YoYo>
        <Parallel/>
        <Setting><Guidance:YoYo.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:YoYo.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:YoYo>

    <Aggregate Id="PatchDetectHorizontal">

        <Sequence Repeat="Repeat"/>

        <Aggregate Id="PatchDetection">

            <When>
                <Arg Name="PatchDetectOn"/>
            </When>

            <Trigger:PeakDetectHorizontal Id="PeakDetectHorizontalTrigger">
                <Sequence/>
<!--debug
                <Break><Arg Name="WpDone"/>
                </Break>
-->
                <Setting><Trigger:PeakDetectHorizontal.patchTracking/><Units:bool/><Value>1</Value></Setting>
                <Setting><Trigger:PeakDetectHorizontal.detectFrom/><Arg Name="Science:PeakChl"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.depthFrom/><Arg Name="Science:PeakChlDepth"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.latitudeFrom/><Arg Name="Science:PeakChlLatitude"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.longitudeFrom/><Arg Name="Science:PeakChlLongitude"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.beginThreshold/><Arg Name="BeginThreshold"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.offPeakFraction/><Arg Name="OffPeakFraction"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.filterWidth/><Arg Name="FilterWidth"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.centerPeak/><Arg Name="PatchMode"/></Setting>
                <OutputArg Name="PatchChl"><Trigger:PeakDetectHorizontal.peakDetect/></OutputArg>
                <OutputArg Name="PatchChlDepth"><Trigger:PeakDetectHorizontal.peakDepth/></OutputArg>
                <OutputArg Name="PatchChlLatitude"><Trigger:PeakDetectHorizontal.peakLatitude/></OutputArg>
                <OutputArg Name="PatchChlLongitude"><Trigger:PeakDetectHorizontal.peakLongitude/></OutputArg>
                <OutputArg Name="PatchChlDistance"><Trigger:PeakDetectHorizontal.peakDistance/></OutputArg>
            </Trigger:PeakDetectHorizontal>

            <Syslog Severity="Important">Fell below OffPeakFraction. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Arg Name="PatchChlDepth"/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog>

            <SendData Service="Express"><Arg Name="PatchChl"/><Arg Name="PatchChlDepth"/><Arg Name="PatchChlLatitude"/><Arg Name="PatchChlLongitude"/>
            </SendData>

            <Assign Id="AssignPatchDetectOff"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

        </Aggregate>

        <Assign Id="AssignPatchDetectOn"><Sequence/><Arg Name="PatchDetectOn"/><True/></Assign>

        <Syslog Severity="Important">Next: bearing for CrossLeg: <Arg Name="WpBearing"/><Units:degree/>. WpMaxDistance = <Arg Name="WpMaxDistance"/><Units:meter/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>.</Syslog>

        <Aggregate Id="CrossLeg">

            <Description>
                This is a long leg across the width of the patch. Also the first
                leg in a mission run. Two waypoints run in parallel: a short run
                to the surfacing point, and a longer run to the edge of the
                patch.
            </Description>

            <Sequence/>

            <Break><Arg Name="WpDone"/>
                <Or><Arg Name="PatchDetectOn"/><Eq><False/></Eq></Or>
            </Break>

            <Guidance:Waypoint Id="CrossSurfaceWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="PatchChlDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Call RefId="SurfaceComms"/>

            <Guidance:Waypoint Id="CrossPeakWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="WpMaxDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

<!--debug-->
            <Syslog Severity="Important">CrossPeakWp done. Lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Arg Name="PatchChlDepth"/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog> 

            <Assign Id="AssignPatchDetectOffInCrossLeg"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

            <Assign Id="AssignWpDoneInCrossLeg"><Sequence/><Arg Name="WpDone"/><True/></Assign>

        </Aggregate>

        <Assign Id="AssignWpBearingForInLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Add><Arg Name="Reverse"/></Add><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

        <Syslog Severity="Important">Next: bearing for InLeg: <Arg Name="WpBearing"/><Units:degree/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Arg Name="PatchChlDepth"/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog> 

        <Guidance:Waypoint Id="InLegWp">
            <Description>
                Simply drive back towards the patch center
            </Description>
            <Sequence/>
            <Timeout Duration="WpTimeout"/>
            <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="PatchChlDistance"/></Setting>
            <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
            <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
        </Guidance:Waypoint>

        <Assign Id="AssignWpBearingForOutLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Sub><Arg Name="Turn"/></Sub><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

        <Syslog Severity="Important">Next: bearing for OutLeg: <Arg Name="WpBearing"/><Units:degree/>. WpMaxDistance = <Arg Name="WpMaxDistance"/><Units:meter/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Arg Name="PatchChlDepth"/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog>

        <Call RefId="SurfaceCommsSplit"/>

        <Assign Id="AssignPatchDetectOnForOutLeg"><Sequence/><Arg Name="PatchDetectOn"/><True/></Assign>

        <Aggregate Id="OutLeg">

            <Description>
                Drive outward until edge of patch is detected.
            </Description>

            <Sequence/>

            <Break><Arg Name="WpDone"/>
                <Or><Arg Name="PatchDetectOn"/><Eq><False/></Eq></Or>
            </Break>

            <Guidance:Waypoint Id="OutLegWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="WpMaxDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Assign Id="AssignPatchDetectOffInOutLeg"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

            <Assign Id="AssignWpDoneInOutLeg"><Sequence/><Arg Name="WpDone"/><True/></Assign>

        </Aggregate>

        <Assign Id="AssignWpBearingForCrossLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Add><Arg Name="Reverse"/></Add><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

    </Aggregate>

</Mission>


2018-09-23T14:19:42.232Z,1537712382.232 [CommandLine](IMPORTANT): Loaded ./Missions/Science/trackPatch.xml
2018-09-23T14:19:51.692Z,1537712391.692 [CommandLine](IMPORTANT): got command set trackPatch.MissionTimeout 20.000000 minute
2018-09-23T14:19:51.693Z,1537712391.693 [CommandLine](IMPORTANT): got command set trackPatch.YoYoMinDepth 2.000000 meter
2018-09-23T14:19:51.694Z,1537712391.694 [CommandLine](IMPORTANT): got command set trackPatch.YoYoMaxDepth 10.000000 meter
2018-09-23T14:19:51.695Z,1537712391.695 [CommandLine](IMPORTANT): got command set trackPatch.PeakChlShallowBnd 3.000000 meter
2018-09-23T14:19:51.696Z,1537712391.696 [CommandLine](IMPORTANT): got command set trackPatch.PeakChlDeepBnd 8.000000 meter
2018-09-23T14:19:51.696Z,1537712391.696 [CommandLine](IMPORTANT): got command run
2018-09-23T14:19:51.698Z,1537712391.698 [CommandLine](IMPORTANT): Running 
2018-09-23T14:19:51.718Z,1537712391.718 [RDI_Pathfinder](ERROR): No DVL communication! Re-initializing
2018-09-23T14:19:51.719Z,1537712391.719 [RDI_Pathfinder] Communications Fault, FailCount= 1
2018-09-23T14:19:51.719Z,1537712391.719 [RDI_Pathfinder](ERROR): Communications Fault
2018-09-23T14:19:51.732Z,1537712391.732 [Default] Stopped
2018-09-23T14:19:51.732Z,1537712391.732 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-23T14:19:51.733Z,1537712391.733 [Default:B.GoToSurface] Stopped
2018-09-23T14:19:51.753Z,1537712391.753 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-23T14:19:51.753Z,1537712391.753 [Default:CheckIn] Stopped
2018-09-23T14:19:51.753Z,1537712391.753 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-23T14:19:51.753Z,1537712391.753 [Default:CheckIn:Read_GPS] Stopped
2018-09-23T14:19:51.753Z,1537712391.753 [MissionManager](IMPORTANT): Started mission trackPatch
2018-09-23T14:19:51.754Z,1537712391.754 [trackPatch] Running Loop=1
2018-09-23T14:19:51.754Z,1537712391.754 [trackPatch](DEBUG): Aggregate::initialize trackPatch
2018-09-23T14:19:51.754Z,1537712391.754 [trackPatch:A.AltitudeEnvelope] Running Loop=1
2018-09-23T14:19:51.754Z,1537712391.754 [trackPatch:A.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-23T14:19:51.754Z,1537712391.754 [trackPatch:B.DepthEnvelope] Running Loop=1
2018-09-23T14:19:51.754Z,1537712391.754 [trackPatch:B.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-23T14:19:51.755Z,1537712391.755 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-23T14:19:51.755Z,1537712391.755 [trackPatch:F.OffshoreEnvelope](DEBUG): Initialize OffshoreEnvelopeComponent.
2018-09-23T14:19:51.755Z,1537712391.755 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-23T14:19:51.755Z,1537712391.755 [trackPatch:G.WaterDepthEnvelope](DEBUG): Initialize WaterDepthEnvelopeComponent.
2018-09-23T14:19:51.755Z,1537712391.755 [trackPatch:H.Pitch] Running Loop=1
2018-09-23T14:19:51.755Z,1537712391.755 [trackPatch:H.Pitch](DEBUG): Initialize.
2018-09-23T14:19:51.755Z,1537712391.755 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-23T14:19:51.755Z,1537712391.755 [trackPatch:I.Buoyancy](DEBUG): Initialize Buoyancy Component.
2018-09-23T14:19:51.755Z,1537712391.755 [trackPatch:Science] Running Loop=1
2018-09-23T14:19:51.755Z,1537712391.755 [trackPatch:Science](DEBUG): Aggregate::initialize trackPatch:Science
2018-09-23T14:19:51.756Z,1537712391.756 [trackPatch:Science:A] Running Loop=1
2018-09-23T14:19:51.756Z,1537712391.756 [trackPatch:Science:B] Running Loop=1
2018-09-23T14:19:51.756Z,1537712391.756 [trackPatch:Science:C] Running Loop=1
2018-09-23T14:19:51.756Z,1537712391.756 [trackPatch:Science:D] Running Loop=1
2018-09-23T14:19:51.756Z,1537712391.756 [trackPatch:Science:E] Running Loop=1
2018-09-23T14:19:51.756Z,1537712391.756 [trackPatch:Science:F] Running Loop=1
2018-09-23T14:19:51.756Z,1537712391.756 [trackPatch:Science:G] Running Loop=1
2018-09-23T14:19:51.756Z,1537712391.756 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-23T14:19:51.756Z,1537712391.756 [trackPatch:Science:HighestChlPeakReport] Running Loop=1
2018-09-23T14:19:51.756Z,1537712391.756 [trackPatch:Science:HighestChlPeakReport](DEBUG): Aggregate::initialize trackPatch:Science:HighestChlPeakReport
2018-09-23T14:19:51.757Z,1537712391.757 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2018-09-23T14:19:51.761Z,1537712391.761 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2018-09-23T14:19:51.761Z,1537712391.761 [trackPatch:Science:PeakDetectNO3] Running Loop=1
2018-09-23T14:19:51.762Z,1537712391.762 [trackPatch:Science:PeakDetectNO3](DEBUG): Aggregate::initialize trackPatch:Science:PeakDetectNO3
2018-09-23T14:19:51.762Z,1537712391.762 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2018-09-23T14:19:51.762Z,1537712391.762 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-23T14:19:51.763Z,1537712391.763 [trackPatch:Science:PeakDetectOil] Running Loop=1
2018-09-23T14:19:51.763Z,1537712391.763 [trackPatch:Science:PeakDetectOil](DEBUG): Aggregate::initialize trackPatch:Science:PeakDetectOil
2018-09-23T14:19:51.763Z,1537712391.763 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2018-09-23T14:19:51.763Z,1537712391.763 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-23T14:19:51.764Z,1537712391.764 [trackPatch:Science:PeakDetectChl] Running Loop=1
2018-09-23T14:19:51.764Z,1537712391.764 [trackPatch:Science:PeakDetectChl](DEBUG): Aggregate::initialize trackPatch:Science:PeakDetectChl
2018-09-23T14:19:51.764Z,1537712391.764 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2018-09-23T14:19:51.773Z,1537712391.773 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-23T14:19:51.774Z,1537712391.774 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-23T14:19:51.774Z,1537712391.774 [trackPatch:K.SetSpeed](DEBUG): Initialize.
2018-09-23T14:19:51.774Z,1537712391.774 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-23T14:19:51.774Z,1537712391.774 [trackPatch:L.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-23T14:19:51.775Z,1537712391.775 [trackPatch:M.YoYo] Running Loop=1
2018-09-23T14:19:51.775Z,1537712391.775 [trackPatch:M.YoYo](DEBUG): Initialize YoYoComponent.
2018-09-23T14:19:51.775Z,1537712391.775 [trackPatch:SurfaceCommsSplit] Running Loop=1
2018-09-23T14:19:51.775Z,1537712391.775 [trackPatch:SurfaceCommsSplit](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit
2018-09-23T14:19:51.775Z,1537712391.775 [trackPatch:SurfaceCommsSplit:A.GoToSurface] Running Loop=1
2018-09-23T14:19:51.775Z,1537712391.775 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T14:19:51.776Z,1537712391.776 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-23T14:19:51.776Z,1537712391.776 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-23T14:19:51.781Z,1537712391.781 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-23T14:19:51.781Z,1537712391.781 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T14:19:51.782Z,1537712391.782 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T14:19:51.783Z,1537712391.783 [trackPatch:M.YoYo] Running Loop=1
2018-09-23T14:19:51.784Z,1537712391.784 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-23T14:19:51.790Z,1537712391.790 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-23T14:19:51.791Z,1537712391.791 [trackPatch:Science] Running Loop=1
2018-09-23T14:19:51.813Z,1537712391.813 [trackPatch:Science:PeakDetectOil] Stopped
2018-09-23T14:19:51.813Z,1537712391.813 [trackPatch:Science:PeakDetectOil](DEBUG): Aggregate::uninitialize trackPatch:Science:PeakDetectOil
2018-09-23T14:19:51.813Z,1537712391.813 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2018-09-23T14:19:51.813Z,1537712391.813 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-23T14:19:51.813Z,1537712391.813 [trackPatch:Science:PeakDetectNO3] Stopped
2018-09-23T14:19:51.814Z,1537712391.814 [trackPatch:Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize trackPatch:Science:PeakDetectNO3
2018-09-23T14:19:51.814Z,1537712391.814 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2018-09-23T14:19:51.814Z,1537712391.814 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-23T14:19:51.814Z,1537712391.814 [trackPatch:Science:HighestChlPeakReport] Stopped
2018-09-23T14:19:51.814Z,1537712391.814 [trackPatch:Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize trackPatch:Science:HighestChlPeakReport
2018-09-23T14:19:51.814Z,1537712391.814 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2018-09-23T14:19:51.814Z,1537712391.814 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-23T14:19:51.815Z,1537712391.815 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-23T14:19:51.816Z,1537712391.816 [trackPatch:Science:Read_Oil](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-23T14:19:51.817Z,1537712391.817 [trackPatch:Science:G] Running Loop=1
2018-09-23T14:19:51.821Z,1537712391.821 [trackPatch:Science:G](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-23T14:19:51.822Z,1537712391.822 [trackPatch:Science:F] Stopped
2018-09-23T14:19:51.822Z,1537712391.822 [trackPatch:Science:E] Stopped
2018-09-23T14:19:51.822Z,1537712391.822 [trackPatch:Science:D] Stopped
2018-09-23T14:19:51.822Z,1537712391.822 [trackPatch:Science:C] Stopped
2018-09-23T14:19:51.822Z,1537712391.822 [trackPatch:Science:B] Stopped
2018-09-23T14:19:51.823Z,1537712391.823 [trackPatch:Science:A] Stopped
2018-09-23T14:19:51.823Z,1537712391.823 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-23T14:19:51.824Z,1537712391.824 [trackPatch:H.Pitch] Running Loop=1
2018-09-23T14:19:51.830Z,1537712391.830 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-23T14:19:51.831Z,1537712391.831 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-23T14:19:51.837Z,1537712391.837 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-23T14:19:51.837Z,1537712391.837 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-23T14:19:51.851Z,1537712391.851 [trackPatch:SurfaceCommsSplit:B] Running Loop=1
2018-09-23T14:19:51.851Z,1537712391.851 [trackPatch:SurfaceCommsSplit:B](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit:B
2018-09-23T14:19:51.851Z,1537712391.851 [trackPatch:SurfaceCommsSplit:B:A] Running Loop=1
2018-09-23T14:19:51.851Z,1537712391.851 [trackPatch:B.DepthEnvelope] Running Loop=1
2018-09-23T14:19:51.852Z,1537712391.852 [trackPatch:A.AltitudeEnvelope] Running Loop=1
2018-09-23T14:19:51.884Z,1537712391.884 [CBIT](ERROR): Communications Fault in component: RDI_Pathfinder
2018-09-23T14:19:52.057Z,1537712392.057 [RDI_Pathfinder](INFO): Powering down
2018-09-23T14:19:52.092Z,1537712392.092 [trackPatch:SurfaceCommsSplit:B:A](INFO): ##UnpackSplit##
2018-09-23T14:19:52.097Z,1537712392.097 [trackPatch:SurfaceCommsSplit:B:A] Stopped
2018-09-23T14:19:52.097Z,1537712392.097 [trackPatch:SurfaceCommsSplit:B](INFO): Completed trackPatch:SurfaceCommsSplit:B
2018-09-23T14:19:52.097Z,1537712392.097 [trackPatch:SurfaceCommsSplit:B] Stopped
2018-09-23T14:19:52.097Z,1537712392.097 [trackPatch:SurfaceCommsSplit:B](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit:B
2018-09-23T14:19:52.098Z,1537712392.098 [trackPatch:SurfaceCommsSplit:C] Running Loop=1
2018-09-23T14:19:52.098Z,1537712392.098 [trackPatch:SurfaceCommsSplit:C](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit:C
2018-09-23T14:19:52.098Z,1537712392.098 [trackPatch:SurfaceCommsSplit:C:A] Running Loop=1
2018-09-23T14:19:52.372Z,1537712392.372 [trackPatch:M.YoYo] Preempted
2018-09-23T14:19:52.372Z,1537712392.372 [trackPatch:L.DepthEnvelope] Preempted
2018-09-23T14:19:52.372Z,1537712392.372 [trackPatch:K.SetSpeed] Preempted
2018-09-23T14:19:52.372Z,1537712392.372 [trackPatch:Science] Preempted
2018-09-23T14:19:52.373Z,1537712392.373 [trackPatch:Science:G] Preempted
2018-09-23T14:19:52.377Z,1537712392.377 [trackPatch:Science:Read_Oil] Preempted
2018-09-23T14:19:52.377Z,1537712392.377 [trackPatch:I.Buoyancy] Preempted
2018-09-23T14:19:52.377Z,1537712392.377 [trackPatch:H.Pitch] Preempted
2018-09-23T14:19:52.377Z,1537712392.377 [trackPatch:G.WaterDepthEnvelope] Preempted
2018-09-23T14:19:52.377Z,1537712392.377 [trackPatch:F.OffshoreEnvelope] Preempted
2018-09-23T14:19:52.378Z,1537712392.378 [trackPatch:SurfaceCommsSplit:C:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-23T14:19:52.789Z,1537712392.789 [CBIT](INFO): Clearing failed state for component RDI_Pathfinder
2018-09-23T14:19:52.789Z,1537712392.789 [RDI_Pathfinder] No Fault, FailCount= 1
2018-09-23T14:19:54.013Z,1537712394.013 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-23T14:20:06.354Z,1537712406.354 [RDI_Pathfinder](ERROR): Failed to parse:Pathfinder
2018-09-23T14:20:30.723Z,1537712430.723 [NAL9602](INFO): GPS fix at 20180923T142020: (36.839613, -121.894739)
2018-09-23T14:20:30.778Z,1537712430.778 [trackPatch:SurfaceCommsSplit:C:A] Stopped
2018-09-23T14:20:30.778Z,1537712430.778 [trackPatch:SurfaceCommsSplit:C:B] Running Loop=1
2018-09-23T14:20:31.191Z,1537712431.191 [trackPatch:SurfaceCommsSplit:C:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-23T14:20:35.740Z,1537712435.740 [DataOverHttps](INFO): Sending 63 bytes from file Logs/20180923T135420/Courier0022.lzma
2018-09-23T14:20:36.497Z,1537712436.497 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Courier0022.lzma.bak
2018-09-23T14:20:36.497Z,1537712436.497 [DataOverHttps](INFO): SBD MOMSN=8567350
2018-09-23T14:20:45.663Z,1537712445.663 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180923T135420/Courier0025.lzma
2018-09-23T14:20:46.427Z,1537712446.427 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Courier0025.lzma.bak
2018-09-23T14:20:46.427Z,1537712446.427 [DataOverHttps](INFO): SBD MOMSN=8567353
2018-09-23T14:20:55.607Z,1537712455.607 [DataOverHttps](INFO): Sending 389 bytes from file Logs/20180923T135420/Express0023.lzma
2018-09-23T14:20:56.398Z,1537712456.398 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Express0023.lzma.bak
2018-09-23T14:20:56.398Z,1537712456.398 [DataOverHttps](INFO): SBD MOMSN=8567355
2018-09-23T14:21:05.480Z,1537712465.480 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180923T135420/Express0026.lzma
2018-09-23T14:21:05.856Z,1537712465.856 [NAL9602](INFO): Powering down
2018-09-23T14:21:06.249Z,1537712466.249 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Express0026.lzma.bak
2018-09-23T14:21:06.249Z,1537712466.249 [DataOverHttps](INFO): SBD MOMSN=8567369
2018-09-23T14:21:06.309Z,1537712466.309 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-32768,V
2018-09-23T14:21:06.787Z,1537712466.787 [trackPatch:SurfaceCommsSplit:C:B] Stopped
2018-09-23T14:21:06.787Z,1537712466.787 [trackPatch:SurfaceCommsSplit:C:C] Running Loop=1
2018-09-23T14:21:07.175Z,1537712467.175 [trackPatch:SurfaceCommsSplit:C:C](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-23T14:21:10.327Z,1537712470.327 [NAL9602](INFO): Powering up
2018-09-23T14:21:21.255Z,1537712481.255 [NAL9602](INFO): NAL9602 initialized
2018-09-23T14:21:22.503Z,1537712482.503 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-23T14:21:22.504Z,1537712482.504 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-3276,-32768,-32768,V
2018-09-23T14:21:39.252Z,1537712499.252 [NAL9602](INFO): SBD MO Status=0, MOMSN=1286, MT Status=0, MTMSN=0
2018-09-23T14:21:39.252Z,1537712499.252 [NAL9602](INFO): No messages in MT queue
2018-09-23T14:22:12.655Z,1537712532.655 [NAL9602](INFO): GPS fix at 20180923T142202: (36.839730, -121.894594)
2018-09-23T14:22:12.726Z,1537712532.726 [trackPatch:SurfaceCommsSplit:C:C] Stopped
2018-09-23T14:22:12.726Z,1537712532.726 [trackPatch:SurfaceCommsSplit:C](INFO): Completed trackPatch:SurfaceCommsSplit:C
2018-09-23T14:22:12.726Z,1537712532.726 [trackPatch:SurfaceCommsSplit:C] Stopped
2018-09-23T14:22:12.726Z,1537712532.726 [trackPatch:SurfaceCommsSplit:C](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit:C
2018-09-23T14:22:12.727Z,1537712532.727 [trackPatch:SurfaceCommsSplit](INFO): Completed trackPatch:SurfaceCommsSplit
2018-09-23T14:22:12.727Z,1537712532.727 [trackPatch:SurfaceCommsSplit] Stopped
2018-09-23T14:22:12.728Z,1537712532.728 [trackPatch:SurfaceCommsSplit](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit
2018-09-23T14:22:12.728Z,1537712532.728 [trackPatch:SurfaceCommsSplit:A.GoToSurface] Stopped
2018-09-23T14:22:12.728Z,1537712532.728 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-23T14:22:12.728Z,1537712532.728 [trackPatch:PatchDetectHorizontal] Running Loop=1
2018-09-23T14:22:12.728Z,1537712532.728 [trackPatch:PatchDetectHorizontal](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal
2018-09-23T14:22:12.728Z,1537712532.728 [trackPatch:PatchDetectHorizontal:AssignPatchDetectOn] Running Loop=1
2018-09-23T14:22:13.114Z,1537712533.114 [trackPatch:PatchDetectHorizontal:AssignPatchDetectOn] Stopped
2018-09-23T14:22:13.114Z,1537712533.114 [trackPatch:PatchDetectHorizontal:C] Running Loop=1
2018-09-23T14:22:13.114Z,1537712533.114 [trackPatch:M.YoYo] Running Loop=1
2018-09-23T14:22:13.115Z,1537712533.115 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-23T14:22:13.116Z,1537712533.116 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-23T14:22:13.116Z,1537712533.116 [trackPatch:Science] Running Loop=1
2018-09-23T14:22:13.123Z,1537712533.123 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-23T14:22:13.123Z,1537712533.123 [trackPatch:Science:G] Running Loop=1
2018-09-23T14:22:13.123Z,1537712533.123 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-23T14:22:13.123Z,1537712533.123 [trackPatch:H.Pitch] Running Loop=1
2018-09-23T14:22:13.124Z,1537712533.124 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-23T14:22:13.124Z,1537712533.124 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-23T14:22:13.464Z,1537712533.464 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-23T14:22:13.464Z,1537712533.464 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-23T14:22:13.527Z,1537712533.527 [trackPatch:PatchDetectHorizontal:C](IMPORTANT): Next: bearing for CrossLeg: -90.000000 arcdeg . WpMaxDistance = 1000.000000 m . Current lat, lon = 36.839730 arcdeg , -121.894594 arcdeg .
2018-09-23T14:22:13.528Z,1537712533.528 [trackPatch:PatchDetectHorizontal:C] Stopped
2018-09-23T14:22:13.528Z,1537712533.528 [trackPatch:PatchDetectHorizontal:CrossLeg] Running Loop=1
2018-09-23T14:22:13.528Z,1537712533.528 [trackPatch:PatchDetectHorizontal:CrossLeg](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal:CrossLeg
2018-09-23T14:22:13.529Z,1537712533.529 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint] Running Loop=1
2018-09-23T14:22:13.529Z,1537712533.529 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-23T14:22:13.530Z,1537712533.530 [trackPatch:PatchDetectHorizontal:PatchDetection] Running Loop=1
2018-09-23T14:22:13.530Z,1537712533.530 [trackPatch:PatchDetectHorizontal:PatchDetection](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal:PatchDetection
2018-09-23T14:22:13.530Z,1537712533.530 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal] Running Loop=1
2018-09-23T14:22:13.530Z,1537712533.530 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](INFO): Initialize.
2018-09-23T14:22:13.928Z,1537712533.928 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint] Stopped
2018-09-23T14:22:13.928Z,1537712533.928 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-23T14:22:13.928Z,1537712533.928 [trackPatch:PatchDetectHorizontal:CrossLeg:B] Running Loop=1
2018-09-23T14:22:13.928Z,1537712533.928 [trackPatch:PatchDetectHorizontal:CrossLeg:B](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal:CrossLeg:B
2018-09-23T14:22:14.314Z,1537712534.314 [trackPatch:SurfaceComms] Running Loop=1
2018-09-23T14:22:14.315Z,1537712534.315 [trackPatch:SurfaceComms](DEBUG): Aggregate::initialize trackPatch:SurfaceComms
2018-09-23T14:22:14.315Z,1537712534.315 [trackPatch:SurfaceComms:SurfaceComms] Running Loop=1
2018-09-23T14:22:14.315Z,1537712534.315 [trackPatch:SurfaceComms:SurfaceComms](DEBUG): Aggregate::initialize trackPatch:SurfaceComms:SurfaceComms
2018-09-23T14:22:14.315Z,1537712534.315 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface] Running Loop=1
2018-09-23T14:22:14.315Z,1537712534.315 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T14:22:14.316Z,1537712534.316 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-23T14:22:14.316Z,1537712534.316 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-23T14:22:14.316Z,1537712534.316 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-23T14:22:14.321Z,1537712534.321 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T14:22:14.322Z,1537712534.322 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T14:22:14.330Z,1537712534.330 [trackPatch:SurfaceComms:SurfaceComms:B] Running Loop=1
2018-09-23T14:22:14.330Z,1537712534.330 [trackPatch:SurfaceComms:SurfaceComms:B](DEBUG): Aggregate::initialize trackPatch:SurfaceComms:SurfaceComms:B
2018-09-23T14:22:14.330Z,1537712534.330 [trackPatch:SurfaceComms:SurfaceComms:B:A] Running Loop=1
2018-09-23T14:22:14.748Z,1537712534.748 [trackPatch:SurfaceComms:SurfaceComms:B] Stopped
2018-09-23T14:22:14.753Z,1537712534.753 [trackPatch:SurfaceComms:SurfaceComms:B](DEBUG): Aggregate::uninitialize trackPatch:SurfaceComms:SurfaceComms:B
2018-09-23T14:22:14.753Z,1537712534.753 [trackPatch:SurfaceComms:SurfaceComms:B:A] Stopped
2018-09-23T14:22:14.753Z,1537712534.753 [trackPatch:SurfaceComms:SurfaceComms:C] Running Loop=1
2018-09-23T14:22:14.753Z,1537712534.753 [trackPatch:SurfaceComms:SurfaceComms:C](DEBUG): Aggregate::initialize trackPatch:SurfaceComms:SurfaceComms:C
2018-09-23T14:22:14.753Z,1537712534.753 [trackPatch:SurfaceComms:SurfaceComms:C:A] Running Loop=1
2018-09-23T14:22:15.153Z,1537712535.153 [trackPatch:M.YoYo] Preempted
2018-09-23T14:22:15.153Z,1537712535.153 [trackPatch:L.DepthEnvelope] Preempted
2018-09-23T14:22:15.153Z,1537712535.153 [trackPatch:K.SetSpeed] Preempted
2018-09-23T14:22:15.153Z,1537712535.153 [trackPatch:Science] Preempted
2018-09-23T14:22:15.153Z,1537712535.153 [trackPatch:Science:G] Preempted
2018-09-23T14:22:15.153Z,1537712535.153 [trackPatch:Science:Read_Oil] Preempted
2018-09-23T14:22:15.153Z,1537712535.153 [trackPatch:I.Buoyancy] Preempted
2018-09-23T14:22:15.153Z,1537712535.153 [trackPatch:H.Pitch] Preempted
2018-09-23T14:22:15.153Z,1537712535.153 [trackPatch:G.WaterDepthEnvelope] Preempted
2018-09-23T14:22:15.153Z,1537712535.153 [trackPatch:F.OffshoreEnvelope] Preempted
2018-09-23T14:22:15.155Z,1537712535.155 [trackPatch:SurfaceComms:SurfaceComms:C:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-23T14:22:15.625Z,1537712535.625 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-23T14:22:17.118Z,1537712537.118 [NAL9602](INFO): GPS fix at 20180923T142206: (36.839734, -121.894593)
2018-09-23T14:22:17.219Z,1537712537.219 [trackPatch:SurfaceComms:SurfaceComms:C:A] Stopped
2018-09-23T14:22:17.219Z,1537712537.219 [trackPatch:SurfaceComms:SurfaceComms:C:B] Running Loop=1
2018-09-23T14:22:17.565Z,1537712537.565 [trackPatch:SurfaceComms:SurfaceComms:C:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-23T14:22:21.732Z,1537712541.732 [DataOverHttps](INFO): Sending 64 bytes from file Logs/20180923T135420/Courier0028.lzma
2018-09-23T14:22:22.502Z,1537712542.502 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Courier0028.lzma.bak
2018-09-23T14:22:22.502Z,1537712542.502 [DataOverHttps](INFO): SBD MOMSN=8567374
2018-09-23T14:22:31.646Z,1537712551.646 [DataOverHttps](INFO): Sending 177 bytes from file Logs/20180923T135420/Express0029.lzma
2018-09-23T14:22:32.393Z,1537712552.393 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Express0029.lzma.bak
2018-09-23T14:22:32.393Z,1537712552.393 [DataOverHttps](INFO): SBD MOMSN=8567386
2018-09-23T14:22:32.925Z,1537712552.925 [trackPatch:SurfaceComms:SurfaceComms:C:B] Stopped
2018-09-23T14:22:32.925Z,1537712552.925 [trackPatch:SurfaceComms:SurfaceComms:C:C] Running Loop=1
2018-09-23T14:22:33.271Z,1537712553.271 [trackPatch:SurfaceComms:SurfaceComms:C:C](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-23T14:22:37.330Z,1537712557.330 [NAL9602](INFO): GPS fix at 20180923T142226: (36.839763, -121.894577)
2018-09-23T14:22:37.390Z,1537712557.390 [trackPatch:SurfaceComms:SurfaceComms:C:C] Stopped
2018-09-23T14:22:37.390Z,1537712557.390 [trackPatch:SurfaceComms:SurfaceComms:C](INFO): Completed trackPatch:SurfaceComms:SurfaceComms:C
2018-09-23T14:22:37.390Z,1537712557.390 [trackPatch:SurfaceComms:SurfaceComms:C] Stopped
2018-09-23T14:22:37.390Z,1537712557.390 [trackPatch:SurfaceComms:SurfaceComms:C](DEBUG): Aggregate::uninitialize trackPatch:SurfaceComms:SurfaceComms:C
2018-09-23T14:22:37.391Z,1537712557.391 [trackPatch:SurfaceComms:SurfaceComms](INFO): Completed trackPatch:SurfaceComms:SurfaceComms
2018-09-23T14:22:37.391Z,1537712557.391 [trackPatch:SurfaceComms:SurfaceComms] Stopped
2018-09-23T14:22:37.391Z,1537712557.391 [trackPatch:SurfaceComms:SurfaceComms](DEBUG): Aggregate::uninitialize trackPatch:SurfaceComms:SurfaceComms
2018-09-23T14:22:37.391Z,1537712557.391 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface] Stopped
2018-09-23T14:22:37.392Z,1537712557.392 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-23T14:22:37.392Z,1537712557.392 [trackPatch:SurfaceComms](INFO): Completed trackPatch:SurfaceComms
2018-09-23T14:22:37.392Z,1537712557.392 [trackPatch:SurfaceComms] Stopped
2018-09-23T14:22:37.392Z,1537712557.392 [trackPatch:SurfaceComms](DEBUG): Aggregate::uninitialize trackPatch:SurfaceComms
2018-09-23T14:22:37.778Z,1537712557.778 [trackPatch:PatchDetectHorizontal:CrossLeg:B](INFO): Completed trackPatch:PatchDetectHorizontal:CrossLeg:B
2018-09-23T14:22:37.778Z,1537712557.778 [trackPatch:PatchDetectHorizontal:CrossLeg:B] Stopped
2018-09-23T14:22:37.778Z,1537712557.778 [trackPatch:PatchDetectHorizontal:CrossLeg:B](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal:CrossLeg:B
2018-09-23T14:22:37.779Z,1537712557.779 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint] Running Loop=1
2018-09-23T14:22:37.779Z,1537712557.779 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-23T14:22:37.780Z,1537712557.780 [trackPatch:M.YoYo] Running Loop=1
2018-09-23T14:22:37.780Z,1537712557.780 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-23T14:22:37.782Z,1537712557.782 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-23T14:22:37.782Z,1537712557.782 [trackPatch:Science] Running Loop=1
2018-09-23T14:22:37.784Z,1537712557.784 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-23T14:22:37.784Z,1537712557.784 [trackPatch:Science:G] Running Loop=1
2018-09-23T14:22:37.784Z,1537712557.784 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-23T14:22:37.785Z,1537712557.785 [trackPatch:H.Pitch] Running Loop=1
2018-09-23T14:22:37.785Z,1537712557.785 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-23T14:22:37.786Z,1537712557.786 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-23T14:22:37.850Z,1537712557.850 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-23T14:22:37.850Z,1537712557.850 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-23T14:23:00.854Z,1537712580.854 [Radio_Surface](INFO): Powering down
2018-09-23T14:23:04.161Z,1537712584.161 [ElevatorOffsetCalculator](INFO): New estimator for commanded vars: speed 1.00 m/s, pitch -20.00 deg, mass-position 0.00 mm (1 active estimators).
2018-09-23T14:23:09.317Z,1537712589.317 [NAL9602](INFO): Powering down
2018-09-23T14:23:34.162Z,1537712614.162 [ElevatorOffsetCalculator](INFO): New estimator for commanded vars: speed 1.00 m/s, pitch 20.00 deg, mass-position 0.00 mm (2 active estimators).
2018-09-23T14:24:03.312Z,1537712643.312 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T14:25:03.315Z,1537712703.315 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T14:25:37.712Z,1537712737.713 [DataOverHttps](INFO): setting unavailable, lastComms_.elapsed()=180.400024
2018-09-23T14:27:03.400Z,1537712823.400 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T14:28:02.294Z,1537712882.294 [RDI_Pathfinder](ERROR): Failed to parse:
0e8d,0fff, 13.912, -0.155, 0.000
2018-09-23T14:28:03.436Z,1537712883.436 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T14:28:11.079Z,1537712891.079 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for altitude
2018-09-23T14:28:11.079Z,1537712891.079 [RDI_Pathfinder](ERROR): Failed to parse:
:BD,  .0  +0.00,        +0.00,   0.00,484.99
2018-09-23T14:28:21.109Z,1537712901.109 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-23T14:28:21.109Z,1537712901.109 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092307335632,35.0, -0.1,   0.0,1448.9I,-32768,-32768,-32768,-32768,V
2018-09-23T14:29:03.536Z,1537712943.536 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T14:29:14.766Z,1537712954.766 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-23T14:29:14.767Z,1537712954.767 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-3276,-32768,V
2018-09-23T14:30:03.939Z,1537713003.939 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T14:31:03.936Z,1537713063.936 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T14:32:04.336Z,1537713124.336 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T14:33:04.736Z,1537713184.736 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T14:34:04.343Z,1537713244.343 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T14:35:04.748Z,1537713304.748 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T14:35:54.782Z,1537713354.782 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for altitude
2018-09-23T14:35:54.782Z,1537713354.782 [RDI_Pathfinder](ERROR): Failed to parse:
:BD,              +0.00,     ,   0.00,947.96
2018-09-23T14:36:05.144Z,1537713365.144 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T14:37:05.148Z,1537713425.148 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T14:37:23.605Z,1537713443.605 [RDI_Pathfinder](ERROR): Failed to parse:
:HM,G,D,0e8d,0ffe,*13.905,*-0.154,*0.000
2018-09-23T14:37:43.226Z,1537713463.226 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for altitude
2018-09-23T14:37:43.226Z,1537713463.226 [RDI_Pathfinder](ERROR): Failed to parse:
:BD,        +0.00,        +0.00,     ,   0.00,1056.95
2018-09-23T14:38:05.160Z,1537713485.160 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T14:39:05.163Z,1537713545.163 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T14:39:19.225Z,1537713559.225 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint] Stopped
2018-09-23T14:39:19.225Z,1537713559.225 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-23T14:39:19.226Z,1537713559.226 [trackPatch:PatchDetectHorizontal:CrossLeg:D] Running Loop=1
2018-09-23T14:39:19.615Z,1537713559.615 [trackPatch:PatchDetectHorizontal:CrossLeg:D](IMPORTANT): CrossPeakWp done. Lat, lon = 36.839431 arcdeg , -121.904790 arcdeg . Patch value is nan ug/l at lat = nan arcdeg , lon = nan arcdeg , dep = nan m , distance = 0.000000 m 
2018-09-23T14:39:19.617Z,1537713559.617 [trackPatch:PatchDetectHorizontal:CrossLeg:D] Stopped
2018-09-23T14:39:19.617Z,1537713559.617 [trackPatch:PatchDetectHorizontal:CrossLeg:AssignPatchDetectOffInCrossLeg] Running Loop=1
2018-09-23T14:39:20.048Z,1537713560.048 [trackPatch:PatchDetectHorizontal:CrossLeg:AssignPatchDetectOffInCrossLeg] Stopped
2018-09-23T14:39:20.049Z,1537713560.049 [trackPatch:PatchDetectHorizontal:CrossLeg:AssignWpDoneInCrossLeg] Running Loop=1
2018-09-23T14:39:20.423Z,1537713560.423 [trackPatch:PatchDetectHorizontal:CrossLeg] Stopped
2018-09-23T14:39:20.424Z,1537713560.424 [trackPatch:PatchDetectHorizontal:CrossLeg](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal:CrossLeg
2018-09-23T14:39:20.424Z,1537713560.424 [trackPatch:PatchDetectHorizontal:CrossLeg:AssignWpDoneInCrossLeg] Stopped
2018-09-23T14:39:20.424Z,1537713560.424 [trackPatch:PatchDetectHorizontal:AssignWpBearingForInLeg] Running Loop=1
2018-09-23T14:39:20.831Z,1537713560.831 [trackPatch:PatchDetectHorizontal:AssignWpBearingForInLeg] Stopped
2018-09-23T14:39:20.831Z,1537713560.831 [trackPatch:PatchDetectHorizontal:F] Running Loop=1
2018-09-23T14:39:21.248Z,1537713561.248 [trackPatch:PatchDetectHorizontal:F](IMPORTANT): Next: bearing for InLeg: 90.000000 arcdeg . Current lat, lon = 36.839432 arcdeg , -121.904808 arcdeg . Patch value is nan ug/l at lat = nan arcdeg , lon = nan arcdeg , dep = nan m , distance = 0.000000 m 
2018-09-23T14:39:21.254Z,1537713561.254 [trackPatch:PatchDetectHorizontal:F] Stopped
2018-09-23T14:39:21.254Z,1537713561.254 [trackPatch:PatchDetectHorizontal:InLegWp.Waypoint] Running Loop=1
2018-09-23T14:39:21.254Z,1537713561.254 [trackPatch:PatchDetectHorizontal:InLegWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-23T14:39:21.604Z,1537713561.604 [trackPatch:PatchDetectHorizontal:InLegWp.Waypoint] Stopped
2018-09-23T14:39:21.604Z,1537713561.604 [trackPatch:PatchDetectHorizontal:InLegWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-23T14:39:21.604Z,1537713561.604 [trackPatch:PatchDetectHorizontal:AssignWpBearingForOutLeg] Running Loop=1
2018-09-23T14:39:22.003Z,1537713562.003 [trackPatch:PatchDetectHorizontal:AssignWpBearingForOutLeg] Stopped
2018-09-23T14:39:22.003Z,1537713562.003 [trackPatch:PatchDetectHorizontal:I] Running Loop=1
2018-09-23T14:39:22.432Z,1537713562.432 [trackPatch:PatchDetectHorizontal:I](IMPORTANT): Next: bearing for OutLeg: 0.000000 arcdeg . WpMaxDistance = 1000.000000 m . Current lat, lon = 36.839433 arcdeg , -121.904821 arcdeg . Patch value is nan ug/l at lat = nan arcdeg , lon = nan arcdeg , dep = nan m , distance = 0.000000 m 
2018-09-23T14:39:22.441Z,1537713562.441 [trackPatch:PatchDetectHorizontal:I] Stopped
2018-09-23T14:39:22.441Z,1537713562.441 [trackPatch:PatchDetectHorizontal:J] Running Loop=1
2018-09-23T14:39:22.441Z,1537713562.441 [trackPatch:PatchDetectHorizontal:J](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal:J
2018-09-23T14:39:22.811Z,1537713562.811 [trackPatch:SurfaceCommsSplit] Running Loop=1
2018-09-23T14:39:22.811Z,1537713562.811 [trackPatch:SurfaceCommsSplit](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit
2018-09-23T14:39:22.811Z,1537713562.811 [trackPatch:SurfaceCommsSplit:A.GoToSurface] Running Loop=1
2018-09-23T14:39:22.811Z,1537713562.811 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T14:39:22.812Z,1537713562.812 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-23T14:39:22.812Z,1537713562.812 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-23T14:39:22.812Z,1537713562.812 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-23T14:39:22.813Z,1537713562.813 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T14:39:22.813Z,1537713562.813 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T14:39:39.388Z,1537713579.388 [trackPatch:SurfaceCommsSplit:B] Running Loop=1
2018-09-23T14:39:39.388Z,1537713579.388 [trackPatch:SurfaceCommsSplit:B](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit:B
2018-09-23T14:39:39.388Z,1537713579.388 [trackPatch:SurfaceCommsSplit:B:A] Running Loop=1
2018-09-23T14:39:39.474Z,1537713579.474 [Radio_Surface](INFO): Powering up
2018-09-23T14:39:39.761Z,1537713579.761 [trackPatch:SurfaceCommsSplit:B:A](INFO): ##UnpackSplit##
2018-09-23T14:39:39.762Z,1537713579.762 [trackPatch:SurfaceCommsSplit:B:A] Stopped
2018-09-23T14:39:39.762Z,1537713579.762 [trackPatch:SurfaceCommsSplit:B](INFO): Completed trackPatch:SurfaceCommsSplit:B
2018-09-23T14:39:39.762Z,1537713579.762 [trackPatch:SurfaceCommsSplit:B] Stopped
2018-09-23T14:39:39.762Z,1537713579.762 [trackPatch:SurfaceCommsSplit:B](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit:B
2018-09-23T14:39:39.762Z,1537713579.762 [trackPatch:SurfaceCommsSplit:C] Running Loop=1
2018-09-23T14:39:39.762Z,1537713579.762 [trackPatch:SurfaceCommsSplit:C](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit:C
2018-09-23T14:39:39.762Z,1537713579.762 [trackPatch:SurfaceCommsSplit:C:A] Running Loop=1
2018-09-23T14:39:40.187Z,1537713580.187 [trackPatch:M.YoYo] Preempted
2018-09-23T14:39:40.187Z,1537713580.187 [trackPatch:L.DepthEnvelope] Preempted
2018-09-23T14:39:40.187Z,1537713580.187 [trackPatch:K.SetSpeed] Preempted
2018-09-23T14:39:40.187Z,1537713580.187 [trackPatch:Science] Preempted
2018-09-23T14:39:40.187Z,1537713580.187 [trackPatch:Science:G] Preempted
2018-09-23T14:39:40.187Z,1537713580.187 [trackPatch:Science:Read_Oil] Preempted
2018-09-23T14:39:40.187Z,1537713580.187 [trackPatch:I.Buoyancy] Preempted
2018-09-23T14:39:40.187Z,1537713580.187 [trackPatch:H.Pitch] Preempted
2018-09-23T14:39:40.188Z,1537713580.188 [trackPatch:G.WaterDepthEnvelope] Preempted
2018-09-23T14:39:40.188Z,1537713580.188 [trackPatch:F.OffshoreEnvelope] Preempted
2018-09-23T14:39:40.297Z,1537713580.297 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-23T14:39:40.510Z,1537713580.510 [NAL9602](INFO): Powering up
2018-09-23T14:39:49.861Z,1537713589.861 [BuoyancyServo](ERROR): getPosition uart error serial timeout
2018-09-23T14:39:49.861Z,1537713589.861 [BuoyancyServo](FAULT): Buoyancy getPosition uart error.serial timeout
2018-09-23T14:39:49.861Z,1537713589.861 [BuoyancyServo] Communications Fault, FailCount= 1
2018-09-23T14:39:49.861Z,1537713589.861 [BuoyancyServo](ERROR): Communications Fault
2018-09-23T14:39:49.986Z,1537713589.986 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-09-23T14:39:50.112Z,1537713590.112 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-23T14:39:50.117Z,1537713590.117 [BuoyancyServo](INFO): Powering down
2018-09-23T14:39:51.634Z,1537713591.634 [NAL9602](INFO): NAL9602 initialized
2018-09-23T14:39:51.692Z,1537713591.692 [BuoyancyServo](FAULT): LCB fault:  Current Limiter Activated.
2018-09-23T14:39:51.692Z,1537713591.692 [BuoyancyServo] Hardware Fault, FailCount= 1
2018-09-23T14:39:51.692Z,1537713591.692 [BuoyancyServo](ERROR): Hardware Fault
2018-09-23T14:39:52.112Z,1537713592.112 [trackPatch](INFO): Timed out from 2018-09-23T14:19:51.8Z
2018-09-23T14:39:52.112Z,1537713592.112 [MissionManager](INFO): trackPatch is completed.
2018-09-23T14:39:52.112Z,1537713592.112 [MissionManager](INFO): Uninitializing Mission trackPatch
2018-09-23T14:39:52.112Z,1537713592.112 [trackPatch] Stopped
2018-09-23T14:39:52.112Z,1537713592.112 [trackPatch](DEBUG): Aggregate::uninitialize trackPatch
2018-09-23T14:39:52.113Z,1537713592.113 [trackPatch:A.AltitudeEnvelope] Stopped
2018-09-23T14:39:52.113Z,1537713592.113 [trackPatch:A.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-23T14:39:52.113Z,1537713592.113 [trackPatch:B.DepthEnvelope] Stopped
2018-09-23T14:39:52.113Z,1537713592.113 [trackPatch:B.DepthEnvelope](DEBUG): Uninitialize.
2018-09-23T14:39:52.113Z,1537713592.113 [trackPatch:SurfaceCommsSplit] Stopped
2018-09-23T14:39:52.113Z,1537713592.113 [trackPatch:SurfaceCommsSplit](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit
2018-09-23T14:39:52.114Z,1537713592.114 [trackPatch:SurfaceCommsSplit:A.GoToSurface] Stopped
2018-09-23T14:39:52.114Z,1537713592.114 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-23T14:39:52.114Z,1537713592.114 [trackPatch:SurfaceCommsSplit:C] Stopped
2018-09-23T14:39:52.114Z,1537713592.114 [trackPatch:SurfaceCommsSplit:C](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit:C
2018-09-23T14:39:52.114Z,1537713592.114 [trackPatch:SurfaceCommsSplit:C:A] Stopped
2018-09-23T14:39:52.114Z,1537713592.114 [trackPatch:F.OffshoreEnvelope] Stopped
2018-09-23T14:39:52.114Z,1537713592.114 [trackPatch:F.OffshoreEnvelope](DEBUG): Uninitialize OffshoreEnvelopeComponent.
2018-09-23T14:39:52.114Z,1537713592.114 [trackPatch:G.WaterDepthEnvelope] Stopped
2018-09-23T14:39:52.114Z,1537713592.114 [trackPatch:G.WaterDepthEnvelope](DEBUG): Uninitialize WaterDepthEnvelopeComponent.
2018-09-23T14:39:52.114Z,1537713592.114 [trackPatch:H.Pitch] Stopped
2018-09-23T14:39:52.114Z,1537713592.114 [trackPatch:I.Buoyancy] Stopped
2018-09-23T14:39:52.115Z,1537713592.115 [trackPatch:I.Buoyancy](DEBUG): Uninitialize Buoyancy Component.
2018-09-23T14:39:52.115Z,1537713592.115 [trackPatch:Science] Stopped
2018-09-23T14:39:52.115Z,1537713592.115 [trackPatch:Science](DEBUG): Aggregate::uninitialize trackPatch:Science
2018-09-23T14:39:52.115Z,1537713592.115 [trackPatch:Science:G] Stopped
2018-09-23T14:39:52.115Z,1537713592.115 [trackPatch:Science:Read_Oil] Stopped
2018-09-23T14:39:52.115Z,1537713592.115 [trackPatch:Science:PeakDetectChl] Stopped
2018-09-23T14:39:52.115Z,1537713592.115 [trackPatch:Science:PeakDetectChl](DEBUG): Aggregate::uninitialize trackPatch:Science:PeakDetectChl
2018-09-23T14:39:52.115Z,1537713592.115 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2018-09-23T14:39:52.115Z,1537713592.115 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-23T14:39:52.115Z,1537713592.115 [trackPatch:K.SetSpeed] Stopped
2018-09-23T14:39:52.115Z,1537713592.115 [trackPatch:K.SetSpeed](DEBUG): Uninitialize.
2018-09-23T14:39:52.116Z,1537713592.116 [trackPatch:L.DepthEnvelope] Stopped
2018-09-23T14:39:52.116Z,1537713592.116 [trackPatch:L.DepthEnvelope](DEBUG): Uninitialize.
2018-09-23T14:39:52.116Z,1537713592.116 [trackPatch:M.YoYo] Stopped
2018-09-23T14:39:52.116Z,1537713592.116 [trackPatch:M.YoYo](DEBUG): Uninitialize YoYoComponent.
2018-09-23T14:39:52.116Z,1537713592.116 [trackPatch:PatchDetectHorizontal] Stopped
2018-09-23T14:39:52.116Z,1537713592.116 [trackPatch:PatchDetectHorizontal](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal
2018-09-23T14:39:52.116Z,1537713592.116 [trackPatch:PatchDetectHorizontal:PatchDetection] Stopped
2018-09-23T14:39:52.116Z,1537713592.116 [trackPatch:PatchDetectHorizontal:PatchDetection](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal:PatchDetection
2018-09-23T14:39:52.116Z,1537713592.116 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal] Stopped
2018-09-23T14:39:52.116Z,1537713592.116 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-23T14:39:52.117Z,1537713592.117 [trackPatch:PatchDetectHorizontal:J] Stopped
2018-09-23T14:39:52.125Z,1537713592.125 [trackPatch:PatchDetectHorizontal:J](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal:J
2018-09-23T14:39:52.239Z,1537713592.239 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-23T14:39:52.239Z,1537713592.239 [BuoyancyServo] No Fault, FailCount= 1
2018-09-23T14:39:52.490Z,1537713592.490 [MissionManager](IMPORTANT): Started mission Default
2018-09-23T14:39:52.491Z,1537713592.491 [Default] Running Loop=1
2018-09-23T14:39:52.491Z,1537713592.491 [Default](DEBUG): Aggregate::initialize Default
2018-09-23T14:39:52.491Z,1537713592.491 [Default:B.GoToSurface] Running Loop=1
2018-09-23T14:39:52.491Z,1537713592.491 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T14:39:52.491Z,1537713592.491 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-23T14:39:52.492Z,1537713592.492 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-23T14:39:52.492Z,1537713592.492 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-23T14:39:52.492Z,1537713592.492 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T14:39:52.497Z,1537713592.497 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T14:39:52.497Z,1537713592.497 [Default:A.Wait] Running Loop=1
2018-09-23T14:39:52.497Z,1537713592.497 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-23T14:39:52.508Z,1537713592.508 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-23T14:39:52.626Z,1537713592.626 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-23T14:40:05.624Z,1537713605.624 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T14:40:05.703Z,1537713605.703 [Default:A.Wait](INFO): Done Waiting.
2018-09-23T14:40:05.703Z,1537713605.703 [Default:A.Wait] Stopped
2018-09-23T14:40:05.703Z,1537713605.703 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-23T14:40:06.113Z,1537713606.113 [Default:CheckIn] Running Loop=1
2018-09-23T14:40:06.113Z,1537713606.113 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-23T14:40:06.113Z,1537713606.113 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-23T14:40:13.228Z,1537713613.228 [NAL9602](INFO): SBD MO Status=2, MOMSN=1287, MT Status=2, MTMSN=0
2018-09-23T14:40:13.228Z,1537713613.228 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-23T14:40:32.436Z,1537713632.436 [NAL9602](INFO): SBD MO Status=0, MOMSN=1287, MT Status=0, MTMSN=0
2018-09-23T14:40:32.437Z,1537713632.437 [NAL9602](INFO): No messages in MT queue
2018-09-23T14:41:06.053Z,1537713666.053 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T14:41:06.831Z,1537713666.831 [NAL9602](INFO): GPS fix at 20180923T144056: (36.840229, -121.904220)
2018-09-23T14:41:06.897Z,1537713666.897 [UniversalFixResidualReporter](INFO): Fix residual: 11.4 %DT, over the last 975.0 m. Residual distance 111.4 m at bearing -141.2 degrees. Fix at (36.8402, -121.9042) with 859.8 m made good.
2018-09-23T14:41:06.898Z,1537713666.898 [Default:CheckIn:Read_GPS] Stopped
2018-09-23T14:41:06.898Z,1537713666.898 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-23T14:41:28.984Z,1537713688.984 [NAL9602](INFO): SBD MO Status=2, MOMSN=1288, MT Status=2, MTMSN=0
2018-09-23T14:41:28.984Z,1537713688.984 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-23T14:41:40.928Z,1537713700.928 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.002675
2018-09-23T14:41:41.396Z,1537713701.396 [RDI_Pathfinder](ERROR): Failed to parse:
:BS,-32768,-32768,-32768,V
2018-09-23T14:41:45.574Z,1537713705.574 [DataOverHttps](INFO): Sending 195 bytes from file Logs/20180923T135420/Courier0031.lzma
2018-09-23T14:41:46.341Z,1537713706.341 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Courier0031.lzma.bak
2018-09-23T14:41:46.341Z,1537713706.341 [DataOverHttps](INFO): SBD MOMSN=8567451
2018-09-23T14:41:50.447Z,1537713710.447 [NAL9602](INFO): SBD MO Status=1, MOMSN=1288, MT Status=0, MTMSN=0
2018-09-23T14:41:50.497Z,1537713710.497 [NAL9602](INFO): Sent 195 bytes from file Logs/20180923T135420/Courier0031.lzma
2018-09-23T14:41:50.497Z,1537713710.497 [NAL9602](INFO): Packets left to send: 0
2018-09-23T14:41:50.499Z,1537713710.499 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180923T135420/Courier0031.lzma.parts/0000.sbd
2018-09-23T14:41:50.499Z,1537713710.499 [NAL9602](DEBUG): Completed sending Logs/20180923T135420/Courier0031.lzma
2018-09-23T14:41:55.611Z,1537713715.611 [DataOverHttps](INFO): Sending 1400 bytes from file Logs/20180923T135420/Express0032.lzma
2018-09-23T14:41:56.378Z,1537713716.378 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Express0032.lzma.bak
2018-09-23T14:41:56.378Z,1537713716.378 [DataOverHttps](INFO): SBD MOMSN=8567455
2018-09-23T14:41:56.909Z,1537713716.909 [Default:CheckIn:Read_Iridium] Stopped
2018-09-23T14:41:56.909Z,1537713716.909 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-23T14:41:56.910Z,1537713716.910 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-23T14:42:20.993Z,1537713740.993 [NAL9602](INFO): Powering down
2018-09-23T14:46:11.427Z,1537713971.427 [RDI_Pathfinder](ERROR): Failed to parse:
:HM,G,D,0e8d,0ffe, 14.066, -0.145, 0.000
2018-09-23T14:46:57.444Z,1537714017.444 [Default:CheckIn:C.Wait](INFO): Done Waiting.
2018-09-23T14:46:57.444Z,1537714017.444 [Default:CheckIn:C.Wait] Stopped
2018-09-23T14:46:57.445Z,1537714017.445 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-23T14:46:57.445Z,1537714017.445 [Default:CheckIn:D] Running Loop=1
2018-09-23T14:46:57.844Z,1537714017.844 [Default:CheckIn:D] Stopped
2018-09-23T14:46:57.849Z,1537714017.849 [Default:CheckIn:E] Running Loop=1
2018-09-23T14:46:58.244Z,1537714018.244 [Default:CheckIn:E](IMPORTANT): Default mission has been running for 7.089227 min 
2018-09-23T14:46:58.257Z,1537714018.257 [Default:CheckIn:E] Stopped
2018-09-23T14:46:58.257Z,1537714018.257 [Default:CheckIn](INFO): Completed Default:CheckIn
2018-09-23T14:46:58.257Z,1537714018.257 [Default:CheckIn] Stopped
2018-09-23T14:46:58.257Z,1537714018.257 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-23T14:46:58.257Z,1537714018.257 [Default:CheckIn](INFO): Running loop #2
2018-09-23T14:46:58.258Z,1537714018.258 [Default:CheckIn] Running Loop=2
2018-09-23T14:46:58.258Z,1537714018.258 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-23T14:46:58.258Z,1537714018.258 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-23T14:47:01.574Z,1537714021.574 [NAL9602](INFO): Powering up
2018-09-23T14:47:12.742Z,1537714032.742 [NAL9602](INFO): NAL9602 initialized
2018-09-23T14:47:26.740Z,1537714046.740 [NAL9602](INFO): SBD MO Status=0, MOMSN=1289, MT Status=0, MTMSN=0
2018-09-23T14:47:26.740Z,1537714046.740 [NAL9602](INFO): No messages in MT queue
2018-09-23T14:48:02.553Z,1537714082.553 [DataOverHttps](IMPORTANT): SBD MTMSN=20180923T144753
2018-09-23T14:48:07.509Z,1537714087.509 [NAL9602](INFO): GPS fix at 20180923T144757: (36.840847, -121.904368)
2018-09-23T14:48:07.574Z,1537714087.574 [Default:CheckIn:Read_GPS] Stopped
2018-09-23T14:48:07.575Z,1537714087.575 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-23T14:48:07.902Z,1537714087.902 [DataOverHttps](INFO): Received command:show best mass_concentration_of_chlorophyll_in_sea_water
2018-09-23T14:48:09.334Z,1537714089.334 [CommandLine](IMPORTANT): got command show best mass_concentration_of_chlorophyll_in_sea_water
2018-09-23T14:48:09.334Z,1537714089.334 [CommandLine](IMPORTANT): mass_concentration_of_chlorophyll_in_sea_water best is null
2018-09-23T14:48:15.922Z,1537714095.922 [DataOverHttps](INFO): Sending 65 bytes from file Logs/20180923T135420/Courier0034.lzma
2018-09-23T14:48:16.717Z,1537714096.717 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Courier0034.lzma.bak
2018-09-23T14:48:16.717Z,1537714096.717 [DataOverHttps](INFO): SBD MOMSN=8567507
2018-09-23T14:48:26.259Z,1537714106.259 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180923T135420/Courier0037.lzma
2018-09-23T14:48:27.057Z,1537714107.057 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Courier0037.lzma.bak
2018-09-23T14:48:27.057Z,1537714107.057 [DataOverHttps](INFO): SBD MOMSN=8567510
2018-09-23T14:48:37.125Z,1537714117.125 [DataOverHttps](INFO): Sending 238 bytes from file Logs/20180923T135420/Express0035.lzma
2018-09-23T14:48:38.212Z,1537714118.212 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Express0035.lzma.bak
2018-09-23T14:48:38.212Z,1537714118.212 [DataOverHttps](INFO): SBD MOMSN=8567512
2018-09-23T14:48:41.904Z,1537714121.904 [NAL9602](INFO): Powering down
2018-09-23T14:48:47.073Z,1537714127.073 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180923T135420/Express0038.lzma
2018-09-23T14:48:47.857Z,1537714127.857 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Express0038.lzma.bak
2018-09-23T14:48:47.857Z,1537714127.857 [DataOverHttps](INFO): SBD MOMSN=8567518
2018-09-23T14:48:48.397Z,1537714128.397 [Default:CheckIn:Read_Iridium] Stopped
2018-09-23T14:48:48.397Z,1537714128.397 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-23T14:48:48.397Z,1537714128.397 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-23T14:53:49.074Z,1537714429.074 [Default:CheckIn:C.Wait](INFO): Done Waiting.
2018-09-23T14:53:49.075Z,1537714429.075 [Default:CheckIn:C.Wait] Stopped
2018-09-23T14:53:49.075Z,1537714429.075 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-23T14:53:49.075Z,1537714429.075 [Default:CheckIn:D] Running Loop=1
2018-09-23T14:53:49.469Z,1537714429.469 [Default:CheckIn:D] Stopped
2018-09-23T14:53:49.470Z,1537714429.470 [Default:CheckIn:E] Running Loop=1
2018-09-23T14:53:52.739Z,1537714432.739 [Default:CheckIn:E](IMPORTANT): Default mission has been running for 13.949645 min 
2018-09-23T14:53:52.739Z,1537714432.739 [Default:CheckIn:E] Stopped
2018-09-23T14:53:52.739Z,1537714432.739 [Default:CheckIn](INFO): Completed Default:CheckIn
2018-09-23T14:53:52.739Z,1537714432.739 [Default:CheckIn] Stopped
2018-09-23T14:53:52.739Z,1537714432.739 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-23T14:53:52.740Z,1537714432.740 [Default:CheckIn](INFO): Running loop #3
2018-09-23T14:53:52.740Z,1537714432.740 [Default:CheckIn] Running Loop=3
2018-09-23T14:53:52.740Z,1537714432.740 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-23T14:53:52.740Z,1537714432.740 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-23T14:53:53.220Z,1537714433.220 [NAL9602](INFO): Powering up
2018-09-23T14:54:04.026Z,1537714444.026 [NAL9602](INFO): NAL9602 initialized
2018-09-23T14:54:19.641Z,1537714459.641 [NAL9602](INFO): SBD MO Status=0, MOMSN=1290, MT Status=0, MTMSN=0
2018-09-23T14:54:19.641Z,1537714459.641 [NAL9602](INFO): No messages in MT queue
2018-09-23T14:54:41.635Z,1537714481.635 [NAL9602](INFO): GPS fix at 20180923T145431: (36.841296, -121.904425)
2018-09-23T14:54:41.667Z,1537714481.667 [Default:CheckIn:Read_GPS] Stopped
2018-09-23T14:54:41.667Z,1537714481.667 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-23T14:54:47.399Z,1537714487.399 [DataOverHttps](INFO): Sending 64 bytes from file Logs/20180923T135420/Courier0040.lzma
2018-09-23T14:54:48.197Z,1537714488.197 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Courier0040.lzma.bak
2018-09-23T14:54:48.198Z,1537714488.198 [DataOverHttps](INFO): SBD MOMSN=8567559
2018-09-23T14:55:00.568Z,1537714500.568 [DataOverHttps](INFO): Sending 130 bytes from file Logs/20180923T135420/Express0041.lzma
2018-09-23T14:55:01.346Z,1537714501.346 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Express0041.lzma.bak
2018-09-23T14:55:01.346Z,1537714501.346 [DataOverHttps](INFO): SBD MOMSN=8567562
2018-09-23T14:55:01.872Z,1537714501.872 [Default:CheckIn:Read_Iridium] Stopped
2018-09-23T14:55:01.872Z,1537714501.872 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-23T14:55:01.872Z,1537714501.872 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-23T14:55:16.714Z,1537714516.714 [NAL9602](INFO): Powering down
2018-09-23T15:00:02.590Z,1537714802.590 [Default:CheckIn:C.Wait](INFO): Done Waiting.
2018-09-23T15:00:02.590Z,1537714802.590 [Default:CheckIn:C.Wait] Stopped
2018-09-23T15:00:02.590Z,1537714802.590 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-23T15:00:02.590Z,1537714802.590 [Default:CheckIn:D] Running Loop=1
2018-09-23T15:00:02.980Z,1537714802.980 [Default:CheckIn:D] Stopped
2018-09-23T15:00:02.980Z,1537714802.980 [Default:CheckIn:E] Running Loop=1
2018-09-23T15:00:06.232Z,1537714806.232 [Default:CheckIn:E](IMPORTANT): Default mission has been running for 20.174823 min 
2018-09-23T15:00:06.233Z,1537714806.233 [Default:CheckIn:E] Stopped
2018-09-23T15:00:06.233Z,1537714806.233 [Default:CheckIn](INFO): Completed Default:CheckIn
2018-09-23T15:00:06.233Z,1537714806.233 [Default:CheckIn] Stopped
2018-09-23T15:00:06.233Z,1537714806.233 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-23T15:00:06.234Z,1537714806.234 [Default:CheckIn](INFO): Running loop #4
2018-09-23T15:00:06.234Z,1537714806.234 [Default:CheckIn] Running Loop=4
2018-09-23T15:00:06.234Z,1537714806.234 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-23T15:00:06.234Z,1537714806.234 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-23T15:00:06.670Z,1537714806.670 [NAL9602](INFO): Powering up
2018-09-23T15:00:17.474Z,1537714817.474 [NAL9602](INFO): NAL9602 initialized
2018-09-23T15:00:33.068Z,1537714833.068 [NAL9602](INFO): SBD MO Status=2, MOMSN=1291, MT Status=2, MTMSN=0
2018-09-23T15:00:33.068Z,1537714833.068 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-23T15:00:44.668Z,1537714844.668 [NAL9602](INFO): SBD MO Status=0, MOMSN=1291, MT Status=0, MTMSN=0
2018-09-23T15:00:44.668Z,1537714844.668 [NAL9602](INFO): No messages in MT queue
2018-09-23T15:00:45.875Z,1537714845.875 [NAL9602](INFO): GPS fix at 20180923T150035: (36.841784, -121.904421)
2018-09-23T15:00:45.936Z,1537714845.936 [Default:CheckIn:Read_GPS] Stopped
2018-09-23T15:00:45.937Z,1537714845.937 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-23T15:00:50.491Z,1537714850.491 [DataOverHttps](INFO): Sending 64 bytes from file Logs/20180923T135420/Courier0043.lzma
2018-09-23T15:00:51.262Z,1537714851.262 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Courier0043.lzma.bak
2018-09-23T15:00:51.262Z,1537714851.262 [DataOverHttps](INFO): SBD MOMSN=8567569
2018-09-23T15:01:01.577Z,1537714861.577 [DataOverHttps](INFO): Sending 130 bytes from file Logs/20180923T135420/Express0044.lzma
2018-09-23T15:01:02.361Z,1537714862.361 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Express0044.lzma.bak
2018-09-23T15:01:02.361Z,1537714862.361 [DataOverHttps](INFO): SBD MOMSN=8567572
2018-09-23T15:01:02.908Z,1537714862.908 [Default:CheckIn:Read_Iridium] Stopped
2018-09-23T15:01:02.908Z,1537714862.908 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-23T15:01:02.909Z,1537714862.909 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-23T15:01:20.546Z,1537714880.546 [NAL9602](INFO): Powering down
2018-09-23T15:06:03.507Z,1537715163.507 [Default:CheckIn:C.Wait](INFO): Done Waiting.
2018-09-23T15:06:03.507Z,1537715163.507 [Default:CheckIn:C.Wait] Stopped
2018-09-23T15:06:03.507Z,1537715163.507 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-23T15:06:03.508Z,1537715163.508 [Default:CheckIn:D] Running Loop=1
2018-09-23T15:06:03.903Z,1537715163.903 [Default:CheckIn:D] Stopped
2018-09-23T15:06:03.903Z,1537715163.903 [Default:CheckIn:E] Running Loop=1
2018-09-23T15:06:04.307Z,1537715164.307 [Default:CheckIn:E](IMPORTANT): Default mission has been running for 26.190204 min 
2018-09-23T15:06:04.307Z,1537715164.307 [Default:CheckIn:E] Stopped
2018-09-23T15:06:04.308Z,1537715164.308 [Default:CheckIn](INFO): Completed Default:CheckIn
2018-09-23T15:06:04.308Z,1537715164.308 [Default:CheckIn] Stopped
2018-09-23T15:06:04.308Z,1537715164.308 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-23T15:06:04.308Z,1537715164.308 [Default:CheckIn](INFO): Running loop #5
2018-09-23T15:06:04.308Z,1537715164.308 [Default:CheckIn] Running Loop=5
2018-09-23T15:06:04.308Z,1537715164.308 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-23T15:06:04.308Z,1537715164.308 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-23T15:06:05.058Z,1537715165.058 [NAL9602](INFO): Powering up
2018-09-23T15:06:16.075Z,1537715176.075 [NAL9602](INFO): NAL9602 initialized
2018-09-23T15:06:43.276Z,1537715203.276 [NAL9602](INFO): SBD MO Status=0, MOMSN=1292, MT Status=0, MTMSN=0
2018-09-23T15:06:43.276Z,1537715203.276 [NAL9602](INFO): No messages in MT queue
2018-09-23T15:07:11.810Z,1537715231.810 [NAL9602](INFO): GPS fix at 20180923T150701: (36.842327, -121.904488)
2018-09-23T15:07:11.881Z,1537715231.881 [Default:CheckIn:Read_GPS] Stopped
2018-09-23T15:07:11.881Z,1537715231.881 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-23T15:07:16.524Z,1537715236.524 [DataOverHttps](INFO): Sending 64 bytes from file Logs/20180923T135420/Courier0046.lzma
2018-09-23T15:07:17.273Z,1537715237.273 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Courier0046.lzma.bak
2018-09-23T15:07:17.274Z,1537715237.274 [DataOverHttps](INFO): SBD MOMSN=8567610
2018-09-23T15:07:18.681Z,1537715238.681 [CommandLine](IMPORTANT): got command show variable mass_concentration_of
2018-09-23T15:07:18.775Z,1537715238.775 [CommandLine](IMPORTANT): mass_concentration_of_chlorophyll_in_sea_water (unknown)
2018-09-23T15:07:18.776Z,1537715238.776 [CommandLine](IMPORTANT): mass_concentration_of_oxygen_in_sea_water (unknown)
2018-09-23T15:07:18.776Z,1537715238.776 [CommandLine](IMPORTANT): mass_concentration_of_petroleum_hydrocarbons_in_sea_water (unknown)
2018-09-23T15:07:18.971Z,1537715238.971 [CommandLine](IMPORTANT): WetLabsBB2FL.bin_median_mass_concentration_of_chlorophyll_in_sea_water (microgram_per_liter)
2018-09-23T15:07:18.972Z,1537715238.972 [CommandLine](IMPORTANT): WetLabsBB2FL.bin_mean_mass_concentration_of_chlorophyll_in_sea_water (microgram_per_liter)
2018-09-23T15:07:18.973Z,1537715238.973 [CommandLine](IMPORTANT): WetLabsBB2FL.bin_variance_mass_concentration_of_chlorophyll_in_sea_water (microgram_per_liter)
2018-09-23T15:07:18.974Z,1537715238.974 [CommandLine](IMPORTANT): WetLabsBB2FL.mass_concentration_of_chlorophyll_in_sea_water (microgram_per_liter)
2018-09-23T15:07:18.976Z,1537715238.976 [CommandLine](IMPORTANT): WetLabsSeaOWL_UV_A.mass_concentration_of_petroleum_hydrocarbons_in_sea_water (kilogram_per_cubic_meter)
2018-09-23T15:07:18.985Z,1537715238.985 [CommandLine](IMPORTANT): WetLabsSeaOWL_UV_A.mass_concentration_of_chlorophyll_in_sea_water (microgram_per_liter)
2018-09-23T15:07:27.912Z,1537715247.912 [DataOverHttps](INFO): Sending 129 bytes from file Logs/20180923T135420/Express0047.lzma
2018-09-23T15:07:28.689Z,1537715248.689 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Express0047.lzma.bak
2018-09-23T15:07:28.689Z,1537715248.689 [DataOverHttps](INFO): SBD MOMSN=8567613
2018-09-23T15:07:29.232Z,1537715249.232 [Default:CheckIn:Read_Iridium] Stopped
2018-09-23T15:07:29.232Z,1537715249.232 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-23T15:07:29.232Z,1537715249.232 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-23T15:07:35.906Z,1537715255.906 [CommandLine](IMPORTANT): got command run ./Missions/Insert/Science.xml
2018-09-23T15:07:35.907Z,1537715255.907 [MissionManager](INFO): Loading Mission: ./Missions/Insert/Science.xml
2018-09-23T15:07:36.281Z,1537715256.281 [MissionManager](INFO): DefineArg Science.SampleISUS = 0 bool
2018-09-23T15:07:36.308Z,1537715256.308 [MissionManager](INFO): DefineArg Science.SampleISUSmaxPitch = 60.000000 arcdeg
2018-09-23T15:07:36.318Z,1537715256.318 [MissionManager](INFO): DefineArg Science.SampleISUSminPitch = -60.000000 arcdeg
2018-09-23T15:07:36.330Z,1537715256.330 [MissionManager](INFO): DefineArg Science.PeakDetectChlActive = 0 bool
2018-09-23T15:07:36.341Z,1537715256.341 [MissionManager](INFO): DefineArg Science.HighestChlPeakReportActive = 0 bool
2018-09-23T15:07:36.354Z,1537715256.354 [MissionManager](INFO): DefineArg Science.PatchTracking = 1 bool
2018-09-23T15:07:36.376Z,1537715256.376 [MissionManager](INFO): DefineArg Science.FilterWidthHorizontal = 3.000000 count
2018-09-23T15:07:36.383Z,1537715256.383 [MissionManager](INFO): DefineArg Science.NumProfilesSlidingwindow = 100.000000 count
2018-09-23T15:07:36.399Z,1537715256.399 [MissionManager](INFO): DefineArg Science.OffPeakFractionHorizontal = 80.000000 %
2018-09-23T15:07:36.406Z,1537715256.406 [MissionManager](INFO): DefineArg Science.PeakDetectNO3Active = 0 bool
2018-09-23T15:07:36.422Z,1537715256.422 [MissionManager](INFO): DefineArg Science.PeakDetectOilActive = 0 bool
2018-09-23T15:07:36.433Z,1537715256.433 [MissionManager](INFO): DefineArg Science.UpwardDerivativeOfTemperatureActive = 0 bool
2018-09-23T15:07:36.445Z,1537715256.445 [MissionManager](INFO): DefineArg Science.EnabledAanderaaO2 = 0.000000 bool
2018-09-23T15:07:36.454Z,1537715256.454 [MissionManager](INFO): DefineArg Science.EnabledNeilBrown = 0.000000 bool
2018-09-23T15:07:36.466Z,1537715256.466 [MissionManager](INFO): DefineArg Science.EnabledSeabird = 0.000000 bool
2018-09-23T15:07:36.470Z,1537715256.470 [MissionManager](INFO): DefineArg Science.EnabledTurbulence_NPS = 0.000000 bool
2018-09-23T15:07:36.478Z,1537715256.478 [MissionManager](INFO): DefineArg Science.EnabledWetLabsBB2FL = 1.000000 bool
2018-09-23T15:07:36.482Z,1537715256.482 [MissionManager](INFO): DefineArg Science.EnabledWetLabsSeaOWL_UV_A = 1.000000 bool
2018-09-23T15:07:36.486Z,1537715256.486 [MissionManager](INFO): DefineArg Science.EnabledISUS = 0.000000 bool
2018-09-23T15:07:36.510Z,1537715256.510 [MissionManager](INFO): DefineArg Science.LowPassWindowLength = 20.000000 count
2018-09-23T15:07:36.513Z,1537715256.513 [MissionManager](INFO): DefineArg Science.PeakChlShallowBound = 10.000000 m
2018-09-23T15:07:36.517Z,1537715256.517 [MissionManager](INFO): DefineArg Science.PeakChlDeepBound = 20.000000 m
2018-09-23T15:07:36.520Z,1537715256.520 [MissionManager](INFO): DefineOutput Science.PeakChl = 0.000000 ug/l
2018-09-23T15:07:36.536Z,1537715256.536 [MissionManager](INFO): DefineOutput Science.PeakChlDepth = 0.000000 m
2018-09-23T15:07:36.540Z,1537715256.540 [MissionManager](INFO): DefineOutput Science.PeakChlTemperature = 0.000000 degC
2018-09-23T15:07:36.543Z,1537715256.543 [MissionManager](INFO): DefineOutput Science.PeakChlLatitude = nan arcdeg
2018-09-23T15:07:36.575Z,1537715256.575 [MissionManager](INFO): DefineOutput Science.PeakChlLongitude = nan arcdeg
2018-09-23T15:07:36.578Z,1537715256.578 [MissionManager](INFO): DefineOutput Science.PeakNO3 = 0.000000 umol/l
2018-09-23T15:07:36.582Z,1537715256.582 [MissionManager](INFO): DefineOutput Science.PeakNO3Depth = 0.000000 m
2018-09-23T15:07:36.585Z,1537715256.585 [MissionManager](INFO): DefineOutput Science.PeakNO3Latitude = nan arcdeg
2018-09-23T15:07:36.589Z,1537715256.589 [MissionManager](INFO): DefineOutput Science.PeakNO3Longitude = nan arcdeg
2018-09-23T15:07:36.592Z,1537715256.592 [MissionManager](INFO): DefineOutput Science.PatchChl = 0.000000 m
2018-09-23T15:07:36.596Z,1537715256.596 [MissionManager](INFO): DefineOutput Science.PatchChlDepth = 0.000000 m
2018-09-23T15:07:36.655Z,1537715256.655 [MissionManager](INFO): DefineOutput Science.PatchChlLatitude = nan arcdeg
2018-09-23T15:07:36.658Z,1537715256.658 [MissionManager](INFO): DefineOutput Science.PatchChlLongitude = nan arcdeg
2018-09-23T15:07:36.670Z,1537715256.670 [MissionManager](INFO): DefineOutput Science.PatchChlDistance = nan m
2018-09-23T15:07:36.702Z,1537715256.702 [MissionManager](INFO): DefineOutput Science.PeakOil = 0.000000 kg/m3
2018-09-23T15:07:36.710Z,1537715256.710 [MissionManager](INFO): DefineOutput Science.PeakOilDepth = 0.000000 m
2018-09-23T15:07:36.730Z,1537715256.730 [MissionManager](INFO): DefineOutput Science.PeakOilLatitude = nan arcdeg
2018-09-23T15:07:36.734Z,1537715256.734 [MissionManager](INFO): DefineOutput Science.PeakOilLongitude = nan arcdeg
2018-09-23T15:07:36.782Z,1537715256.782 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-23T15:07:36.827Z,1537715256.827 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-23T15:07:36.873Z,1537715256.873 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-23T15:07:36.903Z,1537715256.903 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-23T15:07:37.031Z,1537715257.031 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<!-- ====================
     Generated by TethysL
     ==================== -->
<Aggregate xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
           xmlns="Tethys"
           xmlns:Units="Tethys/Units"
           xmlns:Science="Tethys/Science"
           xmlns:Universal="Tethys/Universal"
           xmlns:Trigger="Tethys/Trigger"
           xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                               Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                               Tethys/Science http://okeanids.mbari.org/tethys/Xml/Science.xsd
                               Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd
                               Tethys/Trigger http://okeanids.mbari.org/tethys/Xml/Trigger.xsd"
       Id="Science">

    <DefineArg Name="SampleISUS"><Description>
        Set either this or PeakDetectNO3Active to True in order to sample
        Nitrate. EnabledISUS must also be true.
    </Description><False/></DefineArg>

    <DefineArg Name="SampleISUSmaxPitch"><Description>
        Maximum pitch to sample ISUS. (EnabledISUS must also be true.)
    </Description><Units:degree/><Value>60.0</Value></DefineArg>

    <DefineArg Name="SampleISUSminPitch"><Description>
        Minimum pitch to sample ISUS. (EnabledISUS must also be true.)
    </Description><Units:degree/><Value>-60.0</Value></DefineArg>

    <DefineArg Name="PeakDetectChlActive"><Description>
        Turns on peak detection of Cholorphyll.
    </Description><False/></DefineArg>

    <DefineArg Name="HighestChlPeakReportActive"><Description>
        Turns on reporting of the highest peak value on yo-yo profiles in a
        horizontal sliding window (of length numProfilesSlidingwindow)
    </Description><False/></DefineArg>

    <DefineArg Name="PatchTracking"><Description>
        If tracking a patch
<!--debug
    </Description><False/></DefineArg>
-->
    </Description><True/></DefineArg>

    <DefineArg Name="FilterWidthHorizontal"><Description>
        Width of boxcar filter applied to yoyo-wise chl peaks to pick out the
        highest peak.
    </Description><Units:count/><Value>3</Value></DefineArg>

    <DefineArg Name="NumProfilesSlidingwindow"><Description>
        Length of horizontal sliding window. The highest yoyo-wise chl peak
        (after low-pass filtering by a filter of length FilterWidthHorizontal)
        within this window.
    </Description><Units:count/><Value>100</Value></DefineArg>

    <DefineArg Name="OffPeakFractionHorizontal"><Description>
        When filtered horizontal value is this fraction of the peak, consider it
        outside the patch.
    </Description><Units:percent/><Value>80</Value></DefineArg>

    <DefineArg Name="PeakDetectNO3Active"><Description>
        Turns on peak detection of Nitrate (and turns on ISUS).
    </Description><False/></DefineArg>

    <DefineArg Name="PeakDetectOilActive"><Description>
        Turns on peak detection of Dissolved Oil.
    </Description><False/></DefineArg>

    <DefineArg Name="UpwardDerivativeOfTemperatureActive"><Description>
        Turns on seawater temperature derivative.
    </Description><False/></DefineArg>

    <DefineArg Name="EnabledAanderaaO2"><Description>
        Automatically set to True if the Aanderaa O2 sensor is installed. Set to
        false to disable reading Aandera O2.
    </Description><Science:Aanderaa_O2.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledNeilBrown"><Description>
        Automatically set to true if the Neil Brown CTD is enabled. Set to false
        to disable reading from the Neil Brown.
    </Description><Science:CTD_NeilBrown.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledSeabird"><Description>
        Automatically set to true if the CTD is enabled. Set to false to disable
        reading from the CTD.
    </Description><Science:CTD_Seabird.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledTurbulence_NPS"><Description>
        Automatically set to true if the NPS Turbulence sensor is enabled. Set
        to false to disable reading from the NPS Turbulence sensor.
    </Description><Science:Turbulence_NPS.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledWetLabsBB2FL"><Description>
        Automatically set to true if the the WetLabs BB2FL is enabled. Set to
        false to disable the WetLabs BB2FL.
    </Description><Science:WetLabsBB2FL.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledWetLabsSeaOWL_UV_A"><Description>
        Automatically set to true if the the WetLabs SeaOWL UV-A is enabled. Set
        to false to disable the WetLabs SeaOWL UV-A.
    </Description><Science:WetLabsSeaOWL_UV_A.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledISUS"><Description>
        Automatically set to True if ISUS is enabled. Set to false to disable
        ISUS.
    </Description><Science:ISUS.loadAtStartup/></DefineArg>

    <DefineArg Name="LowPassWindowLength"><Description>
        Low-pass window length (based on depth sensor sampling interval 0.4
        second) for low-pass filtering.
    </Description><Units:count/><Value>20</Value></DefineArg>

    <DefineArg Name="PeakChlShallowBound"><Description>
        Shallow depth bound for detecting chl peak on each descent or ascent
        profile.
<!--debug
    </Description><Units:meter/><Value>NaN</Value></DefineArg>
-->
    </Description><Units:meter/><Value>10</Value></DefineArg>

    <DefineArg Name="PeakChlDeepBound"><Description>
        Deep depth bound for detecting chl peak on each descent or ascent
        profile.
<!--debug
    </Description><Units:meter/><Value>NaN</Value></DefineArg>
-->
    </Description><Units:meter/><Value>20</Value></DefineArg>

    <DefineOutput Name="PeakChl"><Units:microgram_per_liter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakChlDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakChlTemperature"><Units:celsius/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakChlLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakChlLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakNO3"><Units:micromole_per_liter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakNO3Depth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakNO3Latitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakNO3Longitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChl"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PatchChlDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PatchChlLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlDistance"><Units:meter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakOil"><Units:kilogram_per_cubic_meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakOilDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakOilLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakOilLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <Parallel/>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledAanderaaO2"/>
        </While>
        <Universal:mass_concentration_of_oxygen_in_sea_water/>
    </ReadData>

    <ReadData>
        <While>
            <Arg Name="EnabledISUS"/>
            <And>
                <Universal:platform_pitch_angle/>
                <Lt>
                    <Arg Name="SampleISUSmaxPitch"/>
                </Lt>

                <And>
                    <Universal:platform_pitch_angle/>
                    <Gt>
                        <Arg Name="SampleISUSminPitch"/>
                    </Gt>

                    <And>
                        <Arg Name="SampleISUS"/>
                        <Or>
                            <Arg Name="PeakDetectNO3Active"/>
                        </Or>
                    </And>
                </And>
            </And>
        </While>
        <Universal:mole_concentration_of_nitrate_in_sea_water/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledNeilBrown"/>
            <Or>
                <Arg Name="EnabledSeabird"/>
            </Or>
        </While>
        <Universal:sea_water_temperature/>
        <Universal:sea_water_salinity/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledSeabird"/>
        </While>
        <Science:CTD_Seabird.sea_water_temperature/>
        <Science:CTD_Seabird.sea_water_salinity/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledNeilBrown"/>
            <Or>
                <Arg Name="EnabledSeabird"/>
            </Or>

            <And>
                <Arg Name="UpwardDerivativeOfTemperatureActive"/>
            </And>
        </While>
        <Universal:upward_derivative_of_sea_water_temperature/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledTurbulence_NPS"/>
        </While>
        <Science:Turbulence_NPS.MicroCond/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledWetLabsBB2FL"/>
            <Or>
                <Arg Name="PeakDetectChlActive"/>
            </Or>
        </While>
        <Universal:mass_concentration_of_chlorophyll_in_sea_water/>
    </ReadData>

<!--debug-->
    <ReadData Id="Read_Oil" Strategy="MinError">
        <While>
            <Arg Name="EnabledWetLabsSeaOWL_UV_A"/>
            <Or>
                <Arg Name="PeakDetectOilActive"/>
            </Or>
            <Or>
                <Arg Name="PeakDetectChlActive"/>
            </Or>
        </While>
        <Universal:mass_concentration_of_chlorophyll_in_sea_water/>
    </ReadData>

    <Aggregate Id="PeakDetectChl">
<!--debug
        <While>
            <Arg Name="PeakDetectChlActive"/>
        </While>
-->
        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mass_concentration_of_chlorophyll_in_sea_water/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakChlShallowBound"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakChlDeepBound"/></Setting>
            <OutputArg Name="PeakChl"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakChlDepth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakChlTemperature"><Trigger:PeakDetectVsDepth.peakTemperature/></OutputArg>
            <OutputArg Name="PeakChlLatitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakChlLongitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

<!--debug-->
        <Syslog Severity="Important">PeakChl, PeakChlLatitude, PeakChlLongitude = <Arg Name="PeakChl"/><Units:microgram_per_liter/>, <Arg Name="PeakChlLatitude"/><Units:degree/>, <Arg Name="PeakChlLongitude"/><Units:degree/></Syslog>

        <SendData Service="Express">
            <Arg Name="PeakChl"/><Arg Name="PeakChlDepth"/>
        </SendData>
    </Aggregate>

    <Aggregate Id="HighestChlPeakReport">
        <While>
            <Arg Name="HighestChlPeakReportActive"/>
        </While>

        <Trigger:PeakDetectHorizontal>
            <Sequence/>
            <Setting><Trigger:PeakDetectHorizontal.detectFrom/><Arg Name="PeakChl"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.depthFrom/><Arg Name="PeakChlDepth"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.latitudeFrom/><Arg Name="PeakChlLatitude"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.longitudeFrom/><Arg Name="PeakChlLongitude"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.patchTracking/><Arg Name="PatchTracking"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.filterWidth/><Arg Name="FilterWidthHorizontal"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.numProfilesSlidingwindow/><Arg Name="NumProfilesSlidingwindow"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.offPeakFraction/><Arg Name="OffPeakFractionHorizontal"/></Setting>
            <OutputArg Name="PatchChl"><Trigger:PeakDetectHorizontal.peakDetect/></OutputArg>
            <OutputArg Name="PatchChlDepth"><Trigger:PeakDetectHorizontal.peakDepth/></OutputArg>
            <OutputArg Name="PatchChlLatitude"><Trigger:PeakDetectHorizontal.peakLatitude/></OutputArg>
            <OutputArg Name="PatchChlLongitude"><Trigger:PeakDetectHorizontal.peakLongitude/></OutputArg>
            <OutputArg Name="PatchChlDistance"><Trigger:PeakDetectHorizontal.peakDistance/></OutputArg>
        </Trigger:PeakDetectHorizontal>
    </Aggregate>

    <Aggregate Id="PeakDetectNO3">
        <While>
            <Arg Name="PeakDetectNO3Active"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mole_concentration_of_nitrate_in_sea_water/></Setting>
            <OutputArg Name="PeakNO3"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakNO3Depth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakNO3Latitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakNO3Longitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

        <SendData Service="Express">
            <Arg Name="PeakNO3"/><Arg Name="PeakNO3Depth"/>
        </SendData>
    </Aggregate>

    <Aggregate Id="PeakDetectOil">
        <While>
            <Arg Name="PeakDetectOilActive"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mass_concentration_of_petroleum_hydrocarbons_in_sea_water/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <OutputArg Name="PeakOil"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakOilDepth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakOilLatitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakOilLongitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

        <SendData Service="Express">
            <Arg Name="PeakOil"/><Arg Name="PeakOilDepth"/>
        </SendData>
    </Aggregate>
</Aggregate>


2018-09-23T15:07:37.073Z,1537715257.073 [CommandLine](IMPORTANT): Running ./Missions/Insert/Science.xml
2018-09-23T15:07:37.120Z,1537715257.120 [Default] Stopped
2018-09-23T15:07:37.120Z,1537715257.120 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-23T15:07:37.120Z,1537715257.120 [Default:B.GoToSurface] Stopped
2018-09-23T15:07:37.120Z,1537715257.120 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-23T15:07:37.120Z,1537715257.120 [Default:CheckIn] Stopped
2018-09-23T15:07:37.120Z,1537715257.120 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-23T15:07:37.120Z,1537715257.120 [Default:CheckIn:C.Wait] Stopped
2018-09-23T15:07:37.120Z,1537715257.120 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-23T15:07:37.136Z,1537715257.136 [MissionManager](IMPORTANT): Started mission Science
2018-09-23T15:07:37.136Z,1537715257.136 [Science] Running Loop=1
2018-09-23T15:07:37.136Z,1537715257.136 [Science](DEBUG): Aggregate::initialize Science
2018-09-23T15:07:37.136Z,1537715257.136 [Science:A] Running Loop=1
2018-09-23T15:07:37.136Z,1537715257.136 [Science:B] Running Loop=1
2018-09-23T15:07:37.136Z,1537715257.136 [Science:C] Running Loop=1
2018-09-23T15:07:37.136Z,1537715257.136 [Science:D] Running Loop=1
2018-09-23T15:07:37.136Z,1537715257.136 [Science:E] Running Loop=1
2018-09-23T15:07:37.136Z,1537715257.136 [Science:F] Running Loop=1
2018-09-23T15:07:37.137Z,1537715257.137 [Science:G] Running Loop=1
2018-09-23T15:07:37.137Z,1537715257.137 [Science:Read_Oil] Running Loop=1
2018-09-23T15:07:37.137Z,1537715257.137 [Science:HighestChlPeakReport] Running Loop=1
2018-09-23T15:07:37.137Z,1537715257.137 [Science:HighestChlPeakReport](DEBUG): Aggregate::initialize Science:HighestChlPeakReport
2018-09-23T15:07:37.137Z,1537715257.137 [Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2018-09-23T15:07:37.137Z,1537715257.137 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2018-09-23T15:07:37.138Z,1537715257.138 [Science:PeakDetectNO3] Running Loop=1
2018-09-23T15:07:37.138Z,1537715257.138 [Science:PeakDetectNO3](DEBUG): Aggregate::initialize Science:PeakDetectNO3
2018-09-23T15:07:37.138Z,1537715257.138 [Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2018-09-23T15:07:37.138Z,1537715257.138 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-23T15:07:37.139Z,1537715257.139 [Science:PeakDetectOil] Running Loop=1
2018-09-23T15:07:37.140Z,1537715257.140 [Science:PeakDetectOil](DEBUG): Aggregate::initialize Science:PeakDetectOil
2018-09-23T15:07:37.140Z,1537715257.140 [Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2018-09-23T15:07:37.140Z,1537715257.140 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-23T15:07:37.141Z,1537715257.141 [Science:PeakDetectChl] Running Loop=1
2018-09-23T15:07:37.141Z,1537715257.141 [Science:PeakDetectChl](DEBUG): Aggregate::initialize Science:PeakDetectChl
2018-09-23T15:07:37.142Z,1537715257.142 [Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2018-09-23T15:07:37.142Z,1537715257.142 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-23T15:07:37.144Z,1537715257.144 [Science:PeakDetectOil] Stopped
2018-09-23T15:07:37.144Z,1537715257.144 [Science:PeakDetectOil](DEBUG): Aggregate::uninitialize Science:PeakDetectOil
2018-09-23T15:07:37.144Z,1537715257.144 [Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2018-09-23T15:07:37.144Z,1537715257.144 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-23T15:07:37.144Z,1537715257.144 [Science:PeakDetectNO3] Stopped
2018-09-23T15:07:37.144Z,1537715257.144 [Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize Science:PeakDetectNO3
2018-09-23T15:07:37.144Z,1537715257.144 [Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2018-09-23T15:07:37.144Z,1537715257.144 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-23T15:07:37.144Z,1537715257.144 [Science:HighestChlPeakReport] Stopped
2018-09-23T15:07:37.157Z,1537715257.157 [Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize Science:HighestChlPeakReport
2018-09-23T15:07:37.157Z,1537715257.157 [Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2018-09-23T15:07:37.158Z,1537715257.158 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-23T15:07:37.164Z,1537715257.164 [Science:Read_Oil] Running Loop=1
2018-09-23T15:07:37.165Z,1537715257.165 [Science:Read_Oil](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-23T15:07:37.167Z,1537715257.167 [Science:G] Running Loop=1
2018-09-23T15:07:37.167Z,1537715257.167 [Science:G](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-23T15:07:37.169Z,1537715257.169 [Science:F] Stopped
2018-09-23T15:07:37.169Z,1537715257.169 [Science:E] Stopped
2018-09-23T15:07:37.169Z,1537715257.169 [Science:D] Stopped
2018-09-23T15:07:37.169Z,1537715257.169 [Science:C] Stopped
2018-09-23T15:07:37.169Z,1537715257.169 [Science:B] Stopped
2018-09-23T15:07:37.169Z,1537715257.169 [Science:A] Stopped
2018-09-23T15:07:37.375Z,1537715257.375 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-23T15:07:37.376Z,1537715257.376 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-23T15:07:46.630Z,1537715266.630 [NAL9602](INFO): Powering down
2018-09-23T15:07:47.115Z,1537715267.115 [CommandLine](IMPORTANT): got command show best mass_concentration_of_chlorophyll_in_sea_water
2018-09-23T15:07:47.115Z,1537715267.115 [CommandLine](IMPORTANT): mass_concentration_of_chlorophyll_in_sea_water best is WetLabsSeaOWL_UV_A.mass_concentration_of_chlorophyll_in_sea_water
2018-09-23T15:08:21.886Z,1537715301.886 [CommandLine](IMPORTANT): got command report touch 
2018-09-23T15:08:21.886Z,1537715301.886 [CommandLine](FAULT): Incomplete syntax. Try: help report
2018-09-23T15:08:31.530Z,1537715311.530 [CommandLine](IMPORTANT): got command report touch mass_concentration_of_chlorophyll_in_sea_water
2018-09-23T15:08:33.988Z,1537715313.988 [Reporter](INFO): mass_concentration_of_chlorophyll_in_sea_water 8.098440 ug/l
2018-09-23T15:08:34.913Z,1537715314.913 [Reporter](INFO): mass_concentration_of_chlorophyll_in_sea_water 7.701330 ug/l
2018-09-23T15:08:36.127Z,1537715316.127 [Reporter](INFO): mass_concentration_of_chlorophyll_in_sea_water 8.675660 ug/l
2018-09-23T15:08:36.914Z,1537715316.914 [Reporter](INFO): mass_concentration_of_chlorophyll_in_sea_water 8.269870 ug/l
2018-09-23T15:08:38.132Z,1537715318.132 [Reporter](INFO): mass_concentration_of_chlorophyll_in_sea_water 7.156660 ug/l
2018-09-23T15:08:39.287Z,1537715319.287 [Reporter](INFO): mass_concentration_of_chlorophyll_in_sea_water 6.967870 ug/l
2018-09-23T15:08:40.199Z,1537715320.199 [Reporter](INFO): mass_concentration_of_chlorophyll_in_sea_water 7.775110 ug/l
2018-09-23T15:08:40.600Z,1537715320.600 [CommandLine](IMPORTANT): got command report clear
2018-09-23T15:08:46.854Z,1537715326.854 [BPC1](INFO): Calculating totals. Valid battery stick count: 56. Valid reserve battery stick count: 6.
2018-09-23T15:10:02.929Z,1537715402.929 [CommandLine](IMPORTANT): got command show variable PeakDetectChlActive
2018-09-23T15:10:03.370Z,1537715403.370 [CommandLine](IMPORTANT): Science.PeakDetectChlActive (bool)
2018-09-23T15:10:13.732Z,1537715413.732 [CommandLine](IMPORTANT): got command get Science.PeakDetectChlActive
2018-09-23T15:10:13.733Z,1537715413.733 [CommandLine](IMPORTANT): Science.PeakDetectChlActive 0 bool
2018-09-23T15:10:38.489Z,1537715438.489 [CommandLine](IMPORTANT): got command stop
2018-09-23T15:10:38.490Z,1537715438.490 [CommandLine](IMPORTANT): Scheduling is paused
2018-09-23T15:10:38.490Z,1537715438.490 [Supervisor](INFO): Stop Mission called by CommandLine::commandStop
2018-09-23T15:10:38.563Z,1537715438.563 [MissionManager](INFO): MissionManager is completed.
2018-09-23T15:10:38.563Z,1537715438.563 [MissionManager](INFO): Uninitializing Mission Science
2018-09-23T15:10:38.563Z,1537715438.563 [Science] Stopped
2018-09-23T15:10:38.563Z,1537715438.563 [Science](DEBUG): Aggregate::uninitialize Science
2018-09-23T15:10:38.563Z,1537715438.563 [Science:G] Stopped
2018-09-23T15:10:38.563Z,1537715438.563 [Science:Read_Oil] Stopped
2018-09-23T15:10:38.563Z,1537715438.563 [Science:PeakDetectChl] Stopped
2018-09-23T15:10:38.563Z,1537715438.563 [Science:PeakDetectChl](DEBUG): Aggregate::uninitialize Science:PeakDetectChl
2018-09-23T15:10:38.564Z,1537715438.564 [Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2018-09-23T15:10:38.564Z,1537715438.564 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-23T15:10:38.928Z,1537715438.928 [MissionManager](IMPORTANT): Started mission Default
2018-09-23T15:10:38.928Z,1537715438.928 [Default] Running Loop=1
2018-09-23T15:10:38.928Z,1537715438.928 [Default](DEBUG): Aggregate::initialize Default
2018-09-23T15:10:38.928Z,1537715438.928 [Default:B.GoToSurface] Running Loop=1
2018-09-23T15:10:38.928Z,1537715438.928 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T15:10:38.929Z,1537715438.929 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-23T15:10:38.929Z,1537715438.929 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-23T15:10:38.930Z,1537715438.930 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-23T15:10:38.930Z,1537715438.930 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T15:10:38.930Z,1537715438.930 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T15:10:38.931Z,1537715438.931 [Default:A.Wait] Running Loop=1
2018-09-23T15:10:38.931Z,1537715438.931 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-23T15:10:39.006Z,1537715439.006 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-23T15:10:52.139Z,1537715452.139 [Default:A.Wait](INFO): Done Waiting.
2018-09-23T15:10:52.140Z,1537715452.140 [Default:A.Wait] Stopped
2018-09-23T15:10:52.140Z,1537715452.140 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-23T15:10:52.535Z,1537715452.535 [Default:CheckIn] Running Loop=1
2018-09-23T15:10:52.536Z,1537715452.536 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-23T15:10:52.536Z,1537715452.536 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-23T15:10:53.278Z,1537715453.278 [NAL9602](INFO): Powering up
2018-09-23T15:11:04.478Z,1537715464.478 [NAL9602](INFO): NAL9602 initialized
2018-09-23T15:11:20.492Z,1537715480.492 [NAL9602](INFO): SBD MO Status=0, MOMSN=1293, MT Status=0, MTMSN=0
2018-09-23T15:11:20.492Z,1537715480.492 [NAL9602](INFO): No messages in MT queue
2018-09-23T15:11:42.487Z,1537715502.487 [NAL9602](INFO): GPS fix at 20180923T151132: (36.842728, -121.904596)
2018-09-23T15:11:42.540Z,1537715502.540 [Default:CheckIn:Read_GPS] Stopped
2018-09-23T15:11:42.545Z,1537715502.545 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-23T15:11:50.103Z,1537715510.103 [DataOverHttps](INFO): Sending 80 bytes from file Logs/20180923T135420/Courier0049.lzma
2018-09-23T15:11:50.901Z,1537715510.901 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Courier0049.lzma.bak
2018-09-23T15:11:50.901Z,1537715510.901 [DataOverHttps](INFO): SBD MOMSN=8567619
2018-09-23T15:12:12.134Z,1537715532.134 [DataOverHttps](INFO): Sending 947 bytes from file Logs/20180923T135420/Express0050.lzma
2018-09-23T15:12:13.330Z,1537715533.330 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Express0050.lzma.bak
2018-09-23T15:12:13.330Z,1537715533.330 [DataOverHttps](INFO): SBD MOMSN=8567622
2018-09-23T15:12:13.871Z,1537715533.871 [Default:CheckIn:Read_Iridium] Stopped
2018-09-23T15:12:13.871Z,1537715533.871 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-23T15:12:13.872Z,1537715533.872 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-23T15:12:18.318Z,1537715538.318 [NAL9602](INFO): Powering down
2018-09-23T15:15:42.004Z,1537715742.004 [CommandLine](IMPORTANT): got command load ./Missions/Insert/Science.xml
2018-09-23T15:15:42.004Z,1537715742.004 [MissionManager](INFO): Loading Mission: ./Missions/Insert/Science.xml
2018-09-23T15:15:42.315Z,1537715742.315 [MissionManager](INFO): DefineArg Science.SampleISUS = 0 bool
2018-09-23T15:15:42.318Z,1537715742.318 [MissionManager](INFO): DefineArg Science.SampleISUSmaxPitch = 60.000000 arcdeg
2018-09-23T15:15:42.320Z,1537715742.320 [MissionManager](INFO): DefineArg Science.SampleISUSminPitch = -60.000000 arcdeg
2018-09-23T15:15:42.322Z,1537715742.322 [MissionManager](INFO): DefineArg Science.PeakDetectChlActive = 0 bool
2018-09-23T15:15:42.324Z,1537715742.324 [MissionManager](INFO): DefineArg Science.HighestChlPeakReportActive = 0 bool
2018-09-23T15:15:42.330Z,1537715742.330 [MissionManager](INFO): DefineArg Science.PatchTracking = 0 bool
2018-09-23T15:15:42.332Z,1537715742.332 [MissionManager](INFO): DefineArg Science.FilterWidthHorizontal = 3.000000 count
2018-09-23T15:15:42.335Z,1537715742.335 [MissionManager](INFO): DefineArg Science.NumProfilesSlidingwindow = 100.000000 count
2018-09-23T15:15:42.337Z,1537715742.337 [MissionManager](INFO): DefineArg Science.PeakDetectNO3Active = 0 bool
2018-09-23T15:15:42.339Z,1537715742.339 [MissionManager](INFO): DefineArg Science.PeakDetectOilActive = 0 bool
2018-09-23T15:15:42.341Z,1537715742.341 [MissionManager](INFO): DefineArg Science.UpwardDerivativeOfTemperatureActive = 0 bool
2018-09-23T15:15:42.343Z,1537715742.343 [MissionManager](INFO): DefineArg Science.EnabledAanderaaO2 = 0.000000 bool
2018-09-23T15:15:42.346Z,1537715742.346 [MissionManager](INFO): DefineArg Science.EnabledNeilBrown = 0.000000 bool
2018-09-23T15:15:42.349Z,1537715742.349 [MissionManager](INFO): DefineArg Science.EnabledSeabird = 0.000000 bool
2018-09-23T15:15:42.351Z,1537715742.351 [MissionManager](INFO): DefineArg Science.EnabledTurbulence_NPS = 0.000000 bool
2018-09-23T15:15:42.354Z,1537715742.354 [MissionManager](INFO): DefineArg Science.EnabledWetLabsBB2FL = 1.000000 bool
2018-09-23T15:15:42.357Z,1537715742.357 [MissionManager](INFO): DefineArg Science.EnabledWetLabsSeaOWL_UV_A = 1.000000 bool
2018-09-23T15:15:42.359Z,1537715742.359 [MissionManager](INFO): DefineArg Science.EnabledISUS = 0.000000 bool
2018-09-23T15:15:42.362Z,1537715742.362 [MissionManager](INFO): DefineArg Science.LowPassWindowLength = 20.000000 count
2018-09-23T15:15:42.364Z,1537715742.364 [MissionManager](INFO): DefineArg Science.PeakChlShallowBound = nan m
2018-09-23T15:15:42.443Z,1537715742.443 [MissionManager](INFO): DefineArg Science.PeakChlDeepBound = nan m
2018-09-23T15:15:42.477Z,1537715742.477 [MissionManager](INFO): DefineOutput Science.PeakChl = 0.000000 ug/l
2018-09-23T15:15:42.480Z,1537715742.480 [MissionManager](INFO): DefineOutput Science.PeakChlDepth = 0.000000 m
2018-09-23T15:15:42.482Z,1537715742.482 [MissionManager](INFO): DefineOutput Science.PeakChlTemperature = 0.000000 degC
2018-09-23T15:15:42.484Z,1537715742.484 [MissionManager](INFO): DefineOutput Science.PeakChlLatitude = nan arcdeg
2018-09-23T15:15:42.511Z,1537715742.511 [MissionManager](INFO): DefineOutput Science.PeakChlLongitude = nan arcdeg
2018-09-23T15:15:42.514Z,1537715742.514 [MissionManager](INFO): DefineOutput Science.PeakNO3 = 0.000000 umol/l
2018-09-23T15:15:42.516Z,1537715742.516 [MissionManager](INFO): DefineOutput Science.PeakNO3Depth = 0.000000 m
2018-09-23T15:15:42.551Z,1537715742.551 [MissionManager](INFO): DefineOutput Science.PeakNO3Latitude = nan arcdeg
2018-09-23T15:15:42.553Z,1537715742.553 [MissionManager](INFO): DefineOutput Science.PeakNO3Longitude = nan arcdeg
2018-09-23T15:15:42.556Z,1537715742.556 [MissionManager](INFO): DefineOutput Science.PatchChl = 0.000000 m
2018-09-23T15:15:42.600Z,1537715742.600 [MissionManager](INFO): DefineOutput Science.PatchChlDepth = 0.000000 m
2018-09-23T15:15:42.602Z,1537715742.602 [MissionManager](INFO): DefineOutput Science.PatchChlLatitude = nan arcdeg
2018-09-23T15:15:42.605Z,1537715742.605 [MissionManager](INFO): DefineOutput Science.PatchChlLongitude = nan arcdeg
2018-09-23T15:15:42.607Z,1537715742.607 [MissionManager](INFO): DefineOutput Science.PatchChlDistance = nan m
2018-09-23T15:15:42.638Z,1537715742.638 [MissionManager](INFO): DefineOutput Science.PeakOil = 0.000000 kg/m3
2018-09-23T15:15:42.640Z,1537715742.640 [MissionManager](INFO): DefineOutput Science.PeakOilDepth = 0.000000 m
2018-09-23T15:15:42.642Z,1537715742.642 [MissionManager](INFO): DefineOutput Science.PeakOilLatitude = nan arcdeg
2018-09-23T15:15:42.645Z,1537715742.645 [MissionManager](INFO): DefineOutput Science.PeakOilLongitude = nan arcdeg
2018-09-23T15:15:42.672Z,1537715742.672 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-23T15:15:42.706Z,1537715742.706 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-23T15:15:42.763Z,1537715742.763 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-23T15:15:42.818Z,1537715742.818 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-23T15:15:42.899Z,1537715742.899 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<!-- ====================
     Generated by TethysL
     ==================== -->
<Aggregate xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
           xmlns="Tethys"
           xmlns:Units="Tethys/Units"
           xmlns:Science="Tethys/Science"
           xmlns:Universal="Tethys/Universal"
           xmlns:Trigger="Tethys/Trigger"
           xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                               Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                               Tethys/Science http://okeanids.mbari.org/tethys/Xml/Science.xsd
                               Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd
                               Tethys/Trigger http://okeanids.mbari.org/tethys/Xml/Trigger.xsd"
       Id="Science">

    <DefineArg Name="SampleISUS"><Description>
        Set either this or PeakDetectNO3Active to True in order to sample
        Nitrate. EnabledISUS must also be true.
    </Description><False/></DefineArg>

    <DefineArg Name="SampleISUSmaxPitch"><Description>
        Maximum pitch to sample ISUS. (EnabledISUS must also be true.)
    </Description><Units:degree/><Value>60.0</Value></DefineArg>

    <DefineArg Name="SampleISUSminPitch"><Description>
        Minimum pitch to sample ISUS. (EnabledISUS must also be true.)
    </Description><Units:degree/><Value>-60.0</Value></DefineArg>

    <DefineArg Name="PeakDetectChlActive"><Description>
        Turns on peak detection of Cholorphyll.
    </Description><False/></DefineArg>

    <DefineArg Name="HighestChlPeakReportActive"><Description>
        Turns on reporting of the highest peak value on yo-yo profiles in a
        horizontal sliding window (of length numProfilesSlidingwindow)
    </Description><False/></DefineArg>

    <DefineArg Name="PatchTracking"><Description>
        If tracking a patch
    </Description><False/></DefineArg>

    <DefineArg Name="FilterWidthHorizontal"><Description>
        Width of boxcar filter applied to yoyo-wise chl peaks to pick out the
        highest peak.
    </Description><Units:count/><Value>3</Value></DefineArg>

    <DefineArg Name="NumProfilesSlidingwindow"><Description>
        Length of horizontal sliding window. The highest yoyo-wise chl peak
        (after low-pass filtering by a filter of length FilterWidthHorizontal)
        within this window.
    </Description><Units:count/><Value>100</Value></DefineArg>

    <DefineArg Name="PeakDetectNO3Active"><Description>
        Turns on peak detection of Nitrate (and turns on ISUS).
    </Description><False/></DefineArg>

    <DefineArg Name="PeakDetectOilActive"><Description>
        Turns on peak detection of Dissolved Oil.
    </Description><False/></DefineArg>

    <DefineArg Name="UpwardDerivativeOfTemperatureActive"><Description>
        Turns on seawater temperature derivative.
    </Description><False/></DefineArg>

    <DefineArg Name="EnabledAanderaaO2"><Description>
        Automatically set to True if the Aanderaa O2 sensor is installed. Set to
        false to disable reading Aandera O2.
    </Description><Science:Aanderaa_O2.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledNeilBrown"><Description>
        Automatically set to true if the Neil Brown CTD is enabled. Set to false
        to disable reading from the Neil Brown.
    </Description><Science:CTD_NeilBrown.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledSeabird"><Description>
        Automatically set to true if the CTD is enabled. Set to false to disable
        reading from the CTD.
    </Description><Science:CTD_Seabird.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledTurbulence_NPS"><Description>
        Automatically set to true if the NPS Turbulence sensor is enabled. Set
        to false to disable reading from the NPS Turbulence sensor.
    </Description><Science:Turbulence_NPS.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledWetLabsBB2FL"><Description>
        Automatically set to true if the the WetLabs BB2FL is enabled. Set to
        false to disable the WetLabs BB2FL.
    </Description><Science:WetLabsBB2FL.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledWetLabsSeaOWL_UV_A"><Description>
        Automatically set to true if the the WetLabs SeaOWL UV-A is enabled. Set
        to false to disable the WetLabs SeaOWL UV-A.
    </Description><Science:WetLabsSeaOWL_UV_A.loadAtStartup/></DefineArg>

    <DefineArg Name="EnabledISUS"><Description>
        Automatically set to True if ISUS is enabled. Set to false to disable
        ISUS.
    </Description><Science:ISUS.loadAtStartup/></DefineArg>

    <DefineArg Name="LowPassWindowLength"><Description>
        Low-pass window length (based on depth sensor sampling interval 0.4
        second) for low-pass filtering.
    </Description><Units:count/><Value>20</Value></DefineArg>

    <DefineArg Name="PeakChlShallowBound"><Description>
        Shallow depth bound for detecting chl peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>NaN</Value></DefineArg>

    <DefineArg Name="PeakChlDeepBound"><Description>
        Deep depth bound for detecting chl peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>NaN</Value></DefineArg>

    <DefineOutput Name="PeakChl"><Units:microgram_per_liter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakChlDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakChlTemperature"><Units:celsius/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakChlLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakChlLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakNO3"><Units:micromole_per_liter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakNO3Depth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakNO3Latitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakNO3Longitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChl"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PatchChlDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PatchChlLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlDistance"><Units:meter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakOil"><Units:kilogram_per_cubic_meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakOilDepth"><Units:meter/><Value>0</Value></DefineOutput>

    <DefineOutput Name="PeakOilLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PeakOilLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <Parallel/>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledAanderaaO2"/>
        </While>
        <Universal:mass_concentration_of_oxygen_in_sea_water/>
    </ReadData>

    <ReadData>
        <While>
            <Arg Name="EnabledISUS"/>
            <And>
                <Universal:platform_pitch_angle/>
                <Lt>
                    <Arg Name="SampleISUSmaxPitch"/>
                </Lt>

                <And>
                    <Universal:platform_pitch_angle/>
                    <Gt>
                        <Arg Name="SampleISUSminPitch"/>
                    </Gt>

                    <And>
                        <Arg Name="SampleISUS"/>
                        <Or>
                            <Arg Name="PeakDetectNO3Active"/>
                        </Or>
                    </And>
                </And>
            </And>
        </While>
        <Universal:mole_concentration_of_nitrate_in_sea_water/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledNeilBrown"/>
            <Or>
                <Arg Name="EnabledSeabird"/>
            </Or>
        </While>
        <Universal:sea_water_temperature/>
        <Universal:sea_water_salinity/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledSeabird"/>
        </While>
        <Science:CTD_Seabird.sea_water_temperature/>
        <Science:CTD_Seabird.sea_water_salinity/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledNeilBrown"/>
            <Or>
                <Arg Name="EnabledSeabird"/>
            </Or>

            <And>
                <Arg Name="UpwardDerivativeOfTemperatureActive"/>
            </And>
        </While>
        <Universal:upward_derivative_of_sea_water_temperature/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledTurbulence_NPS"/>
        </While>
        <Science:Turbulence_NPS.MicroCond/>
    </ReadData>

    <ReadData Strategy="MinError">
        <While>
            <Arg Name="EnabledWetLabsBB2FL"/>
            <Or>
                <Arg Name="PeakDetectChlActive"/>
            </Or>
        </While>
        <Universal:mass_concentration_of_chlorophyll_in_sea_water/>
    </ReadData>

    <ReadData Id="Read_Oil" Strategy="MinError">
        <While>
            <Arg Name="EnabledWetLabsSeaOWL_UV_A"/>
            <Or>
                <Arg Name="PeakDetectOilActive"/>
            </Or>
        </While>
        <Universal:mass_concentration_of_chlorophyll_in_sea_water/>
    </ReadData>

    <Aggregate Id="PeakDetectChl">
        <While>
            <Arg Name="PeakDetectChlActive"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mass_concentration_of_chlorophyll_in_sea_water/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakChlShallowBound"/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakChlDeepBound"/></Setting>
            <OutputArg Name="PeakChl"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakChlDepth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakChlTemperature"><Trigger:PeakDetectVsDepth.peakTemperature/></OutputArg>
            <OutputArg Name="PeakChlLatitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakChlLongitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

        <SendData Service="Express">
            <Arg Name="PeakChl"/><Arg Name="PeakChlDepth"/>
        </SendData>
    </Aggregate>

    <Aggregate Id="HighestChlPeakReport">
        <While>
            <Arg Name="HighestChlPeakReportActive"/>
        </While>

        <Trigger:PeakDetectHorizontal>
            <Sequence/>
            <Setting><Trigger:PeakDetectHorizontal.detectFrom/><Arg Name="PeakChl"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.depthFrom/><Arg Name="PeakChlDepth"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.latitudeFrom/><Arg Name="PeakChlLatitude"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.longitudeFrom/><Arg Name="PeakChlLongitude"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.patchTracking/><Arg Name="PatchTracking"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.filterWidth/><Arg Name="FilterWidthHorizontal"/></Setting>
            <Setting><Trigger:PeakDetectHorizontal.numProfilesSlidingwindow/><Arg Name="NumProfilesSlidingwindow"/></Setting>
            <OutputArg Name="PatchChl"><Trigger:PeakDetectHorizontal.peakDetect/></OutputArg>
            <OutputArg Name="PatchChlDepth"><Trigger:PeakDetectHorizontal.peakDepth/></OutputArg>
            <OutputArg Name="PatchChlLatitude"><Trigger:PeakDetectHorizontal.peakLatitude/></OutputArg>
            <OutputArg Name="PatchChlLongitude"><Trigger:PeakDetectHorizontal.peakLongitude/></OutputArg>
            <OutputArg Name="PatchChlDistance"><Trigger:PeakDetectHorizontal.peakDistance/></OutputArg>
        </Trigger:PeakDetectHorizontal>
    </Aggregate>

    <Aggregate Id="PeakDetectNO3">
        <While>
            <Arg Name="PeakDetectNO3Active"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mole_concentration_of_nitrate_in_sea_water/></Setting>
            <OutputArg Name="PeakNO3"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakNO3Depth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakNO3Latitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakNO3Longitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

        <SendData Service="Express">
            <Arg Name="PeakNO3"/><Arg Name="PeakNO3Depth"/>
        </SendData>
    </Aggregate>

    <Aggregate Id="PeakDetectOil">
        <While>
            <Arg Name="PeakDetectOilActive"/>
        </While>

        <Trigger:PeakDetectVsDepth>
            <Sequence/>
            <Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mass_concentration_of_petroleum_hydrocarbons_in_sea_water/></Setting>
            <Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
            <OutputArg Name="PeakOil"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
            <OutputArg Name="PeakOilDepth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
            <OutputArg Name="PeakOilLatitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
            <OutputArg Name="PeakOilLongitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
        </Trigger:PeakDetectVsDepth>

        <SendData Service="Express">
            <Arg Name="PeakOil"/><Arg Name="PeakOilDepth"/>
        </SendData>
    </Aggregate>
</Aggregate>

2018-09-23T15:15:42.900Z,1537715742.900 [CommandLine](IMPORTANT): Loaded ./Missions/Insert/Science.xml
2018-09-23T15:15:59.051Z,1537715759.051 [CommandLine](IMPORTANT): got command set Science.PeakDetectChlActive 1.000000 bool
2018-09-23T15:16:02.999Z,1537715762.999 [CommandLine](IMPORTANT): got command run
2018-09-23T15:16:03.001Z,1537715763.001 [CommandLine](IMPORTANT): Running 
2018-09-23T15:16:03.258Z,1537715763.258 [Default] Stopped
2018-09-23T15:16:03.258Z,1537715763.258 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-23T15:16:03.258Z,1537715763.258 [Default:B.GoToSurface] Stopped
2018-09-23T15:16:03.258Z,1537715763.258 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-23T15:16:03.258Z,1537715763.258 [Default:CheckIn] Stopped
2018-09-23T15:16:03.259Z,1537715763.259 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-23T15:16:03.259Z,1537715763.259 [Default:CheckIn:C.Wait] Stopped
2018-09-23T15:16:03.259Z,1537715763.259 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-23T15:16:03.259Z,1537715763.259 [MissionManager](IMPORTANT): Started mission Science
2018-09-23T15:16:03.259Z,1537715763.259 [Science] Running Loop=1
2018-09-23T15:16:03.259Z,1537715763.259 [Science](DEBUG): Aggregate::initialize Science
2018-09-23T15:16:03.259Z,1537715763.259 [Science:A] Running Loop=1
2018-09-23T15:16:03.259Z,1537715763.259 [Science:B] Running Loop=1
2018-09-23T15:16:03.260Z,1537715763.260 [Science:C] Running Loop=1
2018-09-23T15:16:03.260Z,1537715763.260 [Science:D] Running Loop=1
2018-09-23T15:16:03.260Z,1537715763.260 [Science:E] Running Loop=1
2018-09-23T15:16:03.260Z,1537715763.260 [Science:F] Running Loop=1
2018-09-23T15:16:03.260Z,1537715763.260 [Science:G] Running Loop=1
2018-09-23T15:16:03.260Z,1537715763.260 [Science:Read_Oil] Running Loop=1
2018-09-23T15:16:03.260Z,1537715763.260 [Science:PeakDetectChl] Running Loop=1
2018-09-23T15:16:03.260Z,1537715763.260 [Science:PeakDetectChl](DEBUG): Aggregate::initialize Science:PeakDetectChl
2018-09-23T15:16:03.260Z,1537715763.260 [Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2018-09-23T15:16:03.260Z,1537715763.260 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-23T15:16:03.274Z,1537715763.274 [Science:HighestChlPeakReport] Running Loop=1
2018-09-23T15:16:03.274Z,1537715763.274 [Science:HighestChlPeakReport](DEBUG): Aggregate::initialize Science:HighestChlPeakReport
2018-09-23T15:16:03.274Z,1537715763.274 [Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2018-09-23T15:16:03.274Z,1537715763.274 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2018-09-23T15:16:03.275Z,1537715763.275 [Science:PeakDetectNO3] Running Loop=1
2018-09-23T15:16:03.275Z,1537715763.275 [Science:PeakDetectNO3](DEBUG): Aggregate::initialize Science:PeakDetectNO3
2018-09-23T15:16:03.275Z,1537715763.275 [Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2018-09-23T15:16:03.275Z,1537715763.275 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-23T15:16:03.276Z,1537715763.276 [Science:PeakDetectOil] Running Loop=1
2018-09-23T15:16:03.276Z,1537715763.276 [Science:PeakDetectOil](DEBUG): Aggregate::initialize Science:PeakDetectOil
2018-09-23T15:16:03.276Z,1537715763.276 [Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2018-09-23T15:16:03.277Z,1537715763.277 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-23T15:16:03.299Z,1537715763.299 [Science:PeakDetectOil] Stopped
2018-09-23T15:16:03.299Z,1537715763.299 [Science:PeakDetectOil](DEBUG): Aggregate::uninitialize Science:PeakDetectOil
2018-09-23T15:16:03.299Z,1537715763.299 [Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2018-09-23T15:16:03.299Z,1537715763.299 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-23T15:16:03.299Z,1537715763.299 [Science:PeakDetectNO3] Stopped
2018-09-23T15:16:03.299Z,1537715763.299 [Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize Science:PeakDetectNO3
2018-09-23T15:16:03.299Z,1537715763.299 [Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2018-09-23T15:16:03.299Z,1537715763.299 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-23T15:16:03.299Z,1537715763.299 [Science:HighestChlPeakReport] Stopped
2018-09-23T15:16:03.300Z,1537715763.300 [Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize Science:HighestChlPeakReport
2018-09-23T15:16:03.300Z,1537715763.300 [Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2018-09-23T15:16:03.300Z,1537715763.300 [Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-23T15:16:03.300Z,1537715763.300 [Science:PeakDetectChl] Running Loop=1
2018-09-23T15:16:03.305Z,1537715763.305 [Science:Read_Oil] Running Loop=1
2018-09-23T15:16:03.306Z,1537715763.306 [Science:Read_Oil](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-23T15:16:03.307Z,1537715763.307 [Science:G] Running Loop=1
2018-09-23T15:16:03.307Z,1537715763.307 [Science:G](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-23T15:16:03.308Z,1537715763.308 [Science:F] Stopped
2018-09-23T15:16:03.308Z,1537715763.308 [Science:E] Stopped
2018-09-23T15:16:03.308Z,1537715763.308 [Science:D] Stopped
2018-09-23T15:16:03.308Z,1537715763.308 [Science:C] Stopped
2018-09-23T15:16:03.308Z,1537715763.308 [Science:B] Stopped
2018-09-23T15:16:03.308Z,1537715763.308 [Science:A] Stopped
2018-09-23T15:16:03.540Z,1537715763.540 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-23T15:16:03.540Z,1537715763.540 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-23T15:16:23.925Z,1537715783.925 [CommandLine](IMPORTANT): got command show variable PeakDetect
2018-09-23T15:16:24.142Z,1537715784.142 [CommandLine](IMPORTANT): Science.PeakDetectChlActive (bool)
2018-09-23T15:16:24.143Z,1537715784.143 [CommandLine](IMPORTANT): Science.PeakDetectNO3Active (bool)
2018-09-23T15:16:24.143Z,1537715784.143 [CommandLine](IMPORTANT): Science.PeakDetectOilActive (bool)
2018-09-23T15:16:24.146Z,1537715784.146 [CommandLine](IMPORTANT): Science:PeakDetectChl:A.PeakDetectVsDepth.durationOfLastRun (second)
2018-09-23T15:16:40.229Z,1537715800.229 [CommandLine](IMPORTANT): got command get Science.PeakDetectChlActive
2018-09-23T15:16:40.229Z,1537715800.229 [CommandLine](IMPORTANT): Science.PeakDetectChlActive 1 bool
2018-09-23T15:16:52.870Z,1537715812.870 [CommandLine](IMPORTANT): got command report touch Science:PeakDetectChl:A.PeakDetectVsDepth.durationOfLastRun
2018-09-23T15:16:53.199Z,1537715813.199 [Reporter](INFO): Science:PeakDetectChl:A.PeakDetectVsDepth.durationOfLastRun 0.000037 s
2018-09-23T15:16:53.595Z,1537715813.595 [Reporter](INFO): Science:PeakDetectChl:A.PeakDetectVsDepth.durationOfLastRun 0.000040 s
2018-09-23T15:16:53.981Z,1537715813.981 [Reporter](INFO): Science:PeakDetectChl:A.PeakDetectVsDepth.durationOfLastRun 0.000041 s
2018-09-23T15:16:54.419Z,1537715814.419 [Reporter](INFO): Science:PeakDetectChl:A.PeakDetectVsDepth.durationOfLastRun 0.000040 s
2018-09-23T15:16:54.789Z,1537715814.789 [Reporter](INFO): Science:PeakDetectChl:A.PeakDetectVsDepth.durationOfLastRun 0.000038 s
2018-09-23T15:16:55.166Z,1537715815.166 [Reporter](INFO): Science:PeakDetectChl:A.PeakDetectVsDepth.durationOfLastRun 0.000038 s
2018-09-23T15:16:55.597Z,1537715815.597 [Reporter](INFO): Science:PeakDetectChl:A.PeakDetectVsDepth.durationOfLastRun 0.000040 s
2018-09-23T15:16:56.001Z,1537715816.001 [Reporter](INFO): Science:PeakDetectChl:A.PeakDetectVsDepth.durationOfLastRun 0.000038 s
2018-09-23T15:16:56.350Z,1537715816.350 [CommandLine](IMPORTANT): got command report clear
2018-09-23T15:17:39.748Z,1537715859.748 [CommandLine](IMPORTANT): got command show variable peak
2018-09-23T15:17:40.004Z,1537715860.004 [CommandLine](IMPORTANT): Science.PeakDetectChlActive (bool)
2018-09-23T15:17:40.005Z,1537715860.005 [CommandLine](IMPORTANT): Science.HighestChlPeakReportActive (bool)
2018-09-23T15:17:40.006Z,1537715860.006 [CommandLine](IMPORTANT): Science.PeakDetectNO3Active (bool)
2018-09-23T15:17:40.006Z,1537715860.006 [CommandLine](IMPORTANT): Science.PeakDetectOilActive (bool)
2018-09-23T15:17:40.007Z,1537715860.007 [CommandLine](IMPORTANT): Science.PeakChlShallowBound (meter)
2018-09-23T15:17:40.008Z,1537715860.008 [CommandLine](IMPORTANT): Science.PeakChlDeepBound (meter)
2018-09-23T15:17:40.008Z,1537715860.008 [CommandLine](IMPORTANT): Science.PeakChl (microgram_per_liter)
2018-09-23T15:17:40.066Z,1537715860.066 [CommandLine](IMPORTANT): Science.PeakChlDepth (meter)
2018-09-23T15:17:40.066Z,1537715860.066 [CommandLine](IMPORTANT): Science.PeakChlTemperature (celsius)
2018-09-23T15:17:40.067Z,1537715860.067 [CommandLine](IMPORTANT): Science.PeakChlLatitude (degree)
2018-09-23T15:17:40.067Z,1537715860.067 [CommandLine](IMPORTANT): Science.PeakChlLongitude (degree)
2018-09-23T15:17:40.068Z,1537715860.068 [CommandLine](IMPORTANT): Science.PeakNO3 (micromole_per_liter)
2018-09-23T15:17:40.068Z,1537715860.068 [CommandLine](IMPORTANT): Science.PeakNO3Depth (meter)
2018-09-23T15:17:40.080Z,1537715860.080 [CommandLine](IMPORTANT): Science.PeakNO3Latitude (degree)
2018-09-23T15:17:40.080Z,1537715860.080 [CommandLine](IMPORTANT): Science.PeakNO3Longitude (degree)
2018-09-23T15:17:40.081Z,1537715860.081 [CommandLine](IMPORTANT): Science.PeakOil (kilogram_per_cubic_meter)
2018-09-23T15:17:40.082Z,1537715860.082 [CommandLine](IMPORTANT): Science.PeakOilDepth (meter)
2018-09-23T15:17:40.082Z,1537715860.082 [CommandLine](IMPORTANT): Science.PeakOilLatitude (degree)
2018-09-23T15:17:40.082Z,1537715860.082 [CommandLine](IMPORTANT): Science.PeakOilLongitude (degree)
2018-09-23T15:17:40.083Z,1537715860.083 [CommandLine](IMPORTANT): Science:PeakDetectChl:A.PeakDetectVsDepth.durationOfLastRun (second)
2018-09-23T15:18:04.029Z,1537715884.029 [CommandLine](IMPORTANT): got command get Science.PeakChl
2018-09-23T15:18:04.029Z,1537715884.029 [CommandLine](IMPORTANT): Science.PeakChl 0.000000 ug/l
2018-09-23T15:18:17.764Z,1537715897.764 [CommandLine](IMPORTANT): got command get Science.PeakChlDepth
2018-09-23T15:18:17.765Z,1537715897.765 [CommandLine](IMPORTANT): Science.PeakChlDepth 0.000000 m
2018-09-23T15:19:07.767Z,1537715947.767 [CommandLine](IMPORTANT): got command get Science:PeakDetectChl:A.PeakDetectVsDepth.durationOfLastRun
2018-09-23T15:19:07.768Z,1537715947.768 [CommandLine](IMPORTANT): Science:PeakDetectChl:A.PeakDetectVsDepth.durationOfLastRun 0.024190 s
2018-09-23T15:19:30.575Z,1537715970.575 [CommandLine](IMPORTANT): got command stop
2018-09-23T15:19:30.576Z,1537715970.576 [Supervisor](INFO): Stop Mission called by CommandLine::commandStop
2018-09-23T15:19:30.777Z,1537715970.777 [MissionManager](INFO): MissionManager is completed.
2018-09-23T15:19:30.778Z,1537715970.778 [MissionManager](INFO): Uninitializing Mission Science
2018-09-23T15:19:30.778Z,1537715970.778 [Science] Stopped
2018-09-23T15:19:30.778Z,1537715970.778 [Science](DEBUG): Aggregate::uninitialize Science
2018-09-23T15:19:30.778Z,1537715970.778 [Science:G] Stopped
2018-09-23T15:19:30.778Z,1537715970.778 [Science:Read_Oil] Stopped
2018-09-23T15:19:30.778Z,1537715970.778 [Science:PeakDetectChl] Stopped
2018-09-23T15:19:30.778Z,1537715970.778 [Science:PeakDetectChl](DEBUG): Aggregate::uninitialize Science:PeakDetectChl
2018-09-23T15:19:30.778Z,1537715970.778 [Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2018-09-23T15:19:30.779Z,1537715970.779 [Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-23T15:19:31.061Z,1537715971.061 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-23T15:19:31.191Z,1537715971.191 [MissionManager](IMPORTANT): Started mission Default
2018-09-23T15:19:31.192Z,1537715971.192 [Default] Running Loop=1
2018-09-23T15:19:31.192Z,1537715971.192 [Default](DEBUG): Aggregate::initialize Default
2018-09-23T15:19:31.192Z,1537715971.192 [Default:B.GoToSurface] Running Loop=1
2018-09-23T15:19:31.192Z,1537715971.192 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T15:19:31.192Z,1537715971.192 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-23T15:19:31.197Z,1537715971.197 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-23T15:19:31.197Z,1537715971.197 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-23T15:19:31.198Z,1537715971.198 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T15:19:31.198Z,1537715971.198 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T15:19:31.199Z,1537715971.199 [Default:A.Wait] Running Loop=1
2018-09-23T15:19:31.199Z,1537715971.199 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-23T15:19:44.383Z,1537715984.383 [RDI_Pathfinder](ERROR): Failed to parse:
:e8d,0fff,*14.046,*-0.148,*0.000
2018-09-23T15:19:44.445Z,1537715984.445 [Default:A.Wait](INFO): Done Waiting.
2018-09-23T15:19:44.445Z,1537715984.445 [Default:A.Wait] Stopped
2018-09-23T15:19:44.446Z,1537715984.446 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-23T15:19:44.775Z,1537715984.775 [Default:CheckIn] Running Loop=1
2018-09-23T15:19:44.775Z,1537715984.775 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-23T15:19:44.776Z,1537715984.776 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-23T15:19:45.530Z,1537715985.530 [NAL9602](INFO): Powering up
2018-09-23T15:19:56.726Z,1537715996.726 [NAL9602](INFO): NAL9602 initialized
2018-09-23T15:20:17.141Z,1537716017.141 [NAL9602](INFO): SBD MO Status=0, MOMSN=1294, MT Status=0, MTMSN=0
2018-09-23T15:20:17.141Z,1537716017.141 [NAL9602](INFO): No messages in MT queue
2018-09-23T15:20:39.267Z,1537716039.267 [CommandLine](IMPORTANT): got command load ./Missions/Science/trackPatch.xml
2018-09-23T15:20:39.268Z,1537716039.268 [MissionManager](INFO): Loading Mission: ./Missions/Science/trackPatch.xml
2018-09-23T15:20:39.623Z,1537716039.623 [MissionManager](INFO): DefineArg trackPatch.MinAltitude = 5.000000 m
2018-09-23T15:20:39.626Z,1537716039.626 [MissionManager](INFO): DefineArg trackPatch.MaxDepth = 65.000000 m
2018-09-23T15:20:39.628Z,1537716039.628 [MissionManager](INFO): DefineArg trackPatch.MinWaterDepth = 10.000000 m
2018-09-23T15:20:39.630Z,1537716039.630 [MissionManager](INFO): DefineArg trackPatch.MinOffshore = 2000.000000 m
2018-09-23T15:20:39.633Z,1537716039.633 [MissionManager](INFO): DefineArg trackPatch.NeedCommsTime = 180.000000 min
2018-09-23T15:20:39.635Z,1537716039.635 [MissionManager](INFO): DefineArg trackPatch.MissionTimeout = 56.000000 h
2018-09-23T15:20:39.637Z,1537716039.637 [MissionManager](INFO): DefineArg trackPatch.MassDefault = 0.000000 cm
2018-09-23T15:20:39.640Z,1537716039.640 [MissionManager](INFO): DefineArg trackPatch.BuoyancyNeutral = 205.000004 cc
2018-09-23T15:20:39.642Z,1537716039.642 [MissionManager](INFO): DefineArg trackPatch.YoYoMinDepth = 2.000000 m
2018-09-23T15:20:39.644Z,1537716039.644 [MissionManager](INFO): DefineArg trackPatch.YoYoMaxDepth = 10.000000 m
2018-09-23T15:20:39.647Z,1537716039.647 [MissionManager](INFO): DefineArg trackPatch.YoYoUpPitch = 20.000000 arcdeg
2018-09-23T15:20:39.649Z,1537716039.649 [MissionManager](INFO): DefineArg trackPatch.YoYoDownPitch = -20.000000 arcdeg
2018-09-23T15:20:39.651Z,1537716039.651 [MissionManager](INFO): DefineArg trackPatch.Speed = 1.000000 m/s
2018-09-23T15:20:39.654Z,1537716039.654 [MissionManager](INFO): DefineArg trackPatch.WpMaxDistance = 1000.000000 m
2018-09-23T15:20:39.656Z,1537716039.656 [MissionManager](INFO): DefineArg trackPatch.WpTimeout = 8000.000000 s
2018-09-23T15:20:39.709Z,1537716039.709 [MissionManager](INFO): DefineArg trackPatch.WaterFrame = 1 bool
2018-09-23T15:20:39.711Z,1537716039.711 [MissionManager](INFO): DefineArg trackPatch.Repeat = 20.000000 count
2018-09-23T15:20:39.713Z,1537716039.713 [MissionManager](INFO): DefineArg trackPatch.Turn = 90.000000 arcdeg
2018-09-23T15:20:39.715Z,1537716039.715 [MissionManager](INFO): DefineArg trackPatch.Reverse = 180.000000 arcdeg
2018-09-23T15:20:39.772Z,1537716039.772 [MissionManager](INFO): DefineArg trackPatch.TwoPi = 360.000000 arcdeg
2018-09-23T15:20:39.795Z,1537716039.795 [MissionManager](INFO): DefineArg trackPatch.LowPassWindowLen = 20.000000 count
2018-09-23T15:20:39.814Z,1537716039.814 [MissionManager](INFO): DefineArg trackPatch.PeakChlShallowBnd = 3.000000 m
2018-09-23T15:20:39.816Z,1537716039.816 [MissionManager](INFO): DefineArg trackPatch.PeakChlDeepBnd = 8.000000 m
2018-09-23T15:20:39.847Z,1537716039.847 [MissionManager](INFO): DefineArg trackPatch.FilterWidth = 4.000000 count
2018-09-23T15:20:39.860Z,1537716039.860 [MissionManager](INFO): DefineArg trackPatch.BeginThreshold = nan ug/l
2018-09-23T15:20:39.872Z,1537716039.872 [MissionManager](INFO): DefineArg trackPatch.OffPeakFraction = 80.000000 %
2018-09-23T15:20:39.874Z,1537716039.874 [MissionManager](INFO): DefineArg trackPatch.PatchMode = 0 bool
2018-09-23T15:20:39.887Z,1537716039.887 [MissionManager](INFO): DefineArg trackPatch.WpBearing = -90.000000 arcdeg
2018-09-23T15:20:39.899Z,1537716039.899 [MissionManager](INFO): DefineOutput trackPatch.PatchDetectOn = 0 bool
2018-09-23T15:20:39.901Z,1537716039.901 [MissionManager](INFO): DefineOutput trackPatch.WpDone = 0 bool
2018-09-23T15:20:39.904Z,1537716039.904 [MissionManager](INFO): DefineOutput trackPatch.PatchChl = nan ug/l
2018-09-23T15:20:39.906Z,1537716039.906 [MissionManager](INFO): DefineOutput trackPatch.PatchChlDepth = nan m
2018-09-23T15:20:39.929Z,1537716039.929 [MissionManager](INFO): DefineOutput trackPatch.PatchChlLatitude = nan arcdeg
2018-09-23T15:20:39.932Z,1537716039.932 [MissionManager](INFO): DefineOutput trackPatch.PatchChlLongitude = nan arcdeg
2018-09-23T15:20:39.935Z,1537716039.935 [MissionManager](INFO): DefineOutput trackPatch.PatchChlDistance = 0.000000 m
2018-09-23T15:20:39.936Z,1537716039.936 [trackPatch:A.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-23T15:20:39.946Z,1537716039.946 [trackPatch:B.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-23T15:20:39.983Z,1537716039.983 [MissionManager](INFO): Inserting Stack: Missions/Insert/Surface.xml
2018-09-23T15:20:40.044Z,1537716040.044 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.SurfaceDepthRate = nan m/s
2018-09-23T15:20:40.051Z,1537716040.051 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.SurfacePitch = 20.000000 arcdeg
2018-09-23T15:20:40.057Z,1537716040.057 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.SurfaceSpeed = 1.000000 m/s
2018-09-23T15:20:40.059Z,1537716040.059 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.IridiumTimeout = 30.000000 min
2018-09-23T15:20:40.065Z,1537716040.065 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.UnpackSplitAtSurface = 0 bool
2018-09-23T15:20:40.066Z,1537716040.066 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-23T15:20:40.095Z,1537716040.095 [MissionManager](INFO): RedefineArg trackPatch:SurfaceCommsSplit.SurfacePitch = value:20.000000 arcdeg
2018-09-23T15:20:40.096Z,1537716040.096 [MissionManager](INFO): RedefineArg trackPatch:SurfaceCommsSplit.SurfaceSpeed = value:1.000000 m/s
2018-09-23T15:20:40.106Z,1537716040.106 [MissionManager](INFO): RedefineArg trackPatch:SurfaceCommsSplit.UnpackSplitAtSurface = value:1 bool
2018-09-23T15:20:40.107Z,1537716040.107 [MissionManager](INFO): Inserting Stack: Missions/Insert/Surface.xml
2018-09-23T15:20:40.211Z,1537716040.211 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.SurfaceDepthRate = nan m/s
2018-09-23T15:20:40.218Z,1537716040.218 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.SurfacePitch = 20.000000 arcdeg
2018-09-23T15:20:40.220Z,1537716040.220 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.SurfaceSpeed = 1.000000 m/s
2018-09-23T15:20:40.238Z,1537716040.238 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.IridiumTimeout = 30.000000 min
2018-09-23T15:20:40.240Z,1537716040.240 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.UnpackSplitAtSurface = 0 bool
2018-09-23T15:20:40.249Z,1537716040.249 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-23T15:20:40.305Z,1537716040.305 [MissionManager](INFO): RedefineArg trackPatch:SurfaceComms:SurfaceComms.SurfacePitch = value:20.000000 arcdeg
2018-09-23T15:20:40.307Z,1537716040.307 [MissionManager](INFO): RedefineArg trackPatch:SurfaceComms:SurfaceComms.SurfaceSpeed = value:1.000000 m/s
2018-09-23T15:20:40.329Z,1537716040.329 [trackPatch:F.OffshoreEnvelope](DEBUG): Construct OffshoreEnvelope.
2018-09-23T15:20:40.346Z,1537716040.346 [trackPatch:G.WaterDepthEnvelope](DEBUG): Construct WaterDepthEnvelope.
2018-09-23T15:20:40.362Z,1537716040.362 [trackPatch:H.Pitch](DEBUG): Construct.
2018-09-23T15:20:40.384Z,1537716040.384 [trackPatch:I.Buoyancy](DEBUG): Construct Buoyancy.
2018-09-23T15:20:40.386Z,1537716040.386 [MissionManager](INFO): Inserting Stack: Missions/Insert/Science.xml
2018-09-23T15:20:40.827Z,1537716040.827 [MissionManager](INFO): DefineArg trackPatch:Science.SampleISUS = 0 bool
2018-09-23T15:20:40.829Z,1537716040.829 [MissionManager](INFO): DefineArg trackPatch:Science.SampleISUSmaxPitch = 60.000000 arcdeg
2018-09-23T15:20:40.831Z,1537716040.831 [MissionManager](INFO): DefineArg trackPatch:Science.SampleISUSminPitch = -60.000000 arcdeg
2018-09-23T15:20:40.861Z,1537716040.861 [MissionManager](INFO): DefineArg trackPatch:Science.PeakDetectChlActive = 0 bool
2018-09-23T15:20:40.863Z,1537716040.863 [MissionManager](INFO): DefineArg trackPatch:Science.HighestChlPeakReportActive = 0 bool
2018-09-23T15:20:40.865Z,1537716040.865 [MissionManager](INFO): DefineArg trackPatch:Science.PatchTracking = 0 bool
2018-09-23T15:20:40.867Z,1537716040.867 [MissionManager](INFO): DefineArg trackPatch:Science.FilterWidthHorizontal = 3.000000 count
2018-09-23T15:20:40.869Z,1537716040.869 [MissionManager](INFO): DefineArg trackPatch:Science.NumProfilesSlidingwindow = 100.000000 count
2018-09-23T15:20:40.871Z,1537716040.871 [MissionManager](INFO): DefineArg trackPatch:Science.PeakDetectNO3Active = 0 bool
2018-09-23T15:20:40.884Z,1537716040.884 [MissionManager](INFO): DefineArg trackPatch:Science.PeakDetectOilActive = 0 bool
2018-09-23T15:20:40.886Z,1537716040.886 [MissionManager](INFO): DefineArg trackPatch:Science.UpwardDerivativeOfTemperatureActive = 0 bool
2018-09-23T15:20:40.889Z,1537716040.889 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledAanderaaO2 = 0.000000 bool
2018-09-23T15:20:40.891Z,1537716040.891 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledNeilBrown = 0.000000 bool
2018-09-23T15:20:40.910Z,1537716040.910 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledSeabird = 0.000000 bool
2018-09-23T15:20:40.912Z,1537716040.912 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledTurbulence_NPS = 0.000000 bool
2018-09-23T15:20:40.915Z,1537716040.915 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledWetLabsBB2FL = 1.000000 bool
2018-09-23T15:20:40.917Z,1537716040.917 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledWetLabsSeaOWL_UV_A = 1.000000 bool
2018-09-23T15:20:40.920Z,1537716040.920 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledISUS = 0.000000 bool
2018-09-23T15:20:40.934Z,1537716040.934 [MissionManager](INFO): DefineArg trackPatch:Science.LowPassWindowLength = 20.000000 count
2018-09-23T15:20:40.936Z,1537716040.936 [MissionManager](INFO): DefineArg trackPatch:Science.PeakChlShallowBound = nan m
2018-09-23T15:20:41.006Z,1537716041.006 [MissionManager](INFO): DefineArg trackPatch:Science.PeakChlDeepBound = nan m
2018-09-23T15:20:41.008Z,1537716041.008 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChl = 0.000000 ug/l
2018-09-23T15:20:41.019Z,1537716041.019 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlDepth = 0.000000 m
2018-09-23T15:20:41.033Z,1537716041.033 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlTemperature = 0.000000 degC
2018-09-23T15:20:41.035Z,1537716041.035 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlLatitude = nan arcdeg
2018-09-23T15:20:41.053Z,1537716041.053 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlLongitude = nan arcdeg
2018-09-23T15:20:41.056Z,1537716041.056 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3 = 0.000000 umol/l
2018-09-23T15:20:41.058Z,1537716041.058 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3Depth = 0.000000 m
2018-09-23T15:20:41.060Z,1537716041.060 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3Latitude = nan arcdeg
2018-09-23T15:20:41.074Z,1537716041.074 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3Longitude = nan arcdeg
2018-09-23T15:20:41.076Z,1537716041.076 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChl = 0.000000 m
2018-09-23T15:20:41.079Z,1537716041.079 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlDepth = 0.000000 m
2018-09-23T15:20:41.085Z,1537716041.085 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlLatitude = nan arcdeg
2018-09-23T15:20:41.090Z,1537716041.090 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlLongitude = nan arcdeg
2018-09-23T15:20:41.092Z,1537716041.092 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlDistance = nan m
2018-09-23T15:20:41.095Z,1537716041.095 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOil = 0.000000 kg/m3
2018-09-23T15:20:41.109Z,1537716041.109 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOilDepth = 0.000000 m
2018-09-23T15:20:41.112Z,1537716041.112 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOilLatitude = nan arcdeg
2018-09-23T15:20:41.122Z,1537716041.122 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOilLongitude = nan arcdeg
2018-09-23T15:20:41.184Z,1537716041.184 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-23T15:20:41.222Z,1537716041.222 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-23T15:20:41.255Z,1537716041.255 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-23T15:20:41.286Z,1537716041.286 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-23T15:20:41.311Z,1537716041.311 [MissionManager](INFO): RedefineArg trackPatch:Science.PeakDetectChlActive = value:1 bool
2018-09-23T15:20:41.312Z,1537716041.312 [MissionManager](INFO): RedefineArg trackPatch:Science.PatchTracking = value:1 bool
2018-09-23T15:20:41.326Z,1537716041.326 [MissionManager](INFO): RedefineArg trackPatch:Science.LowPassWindowLength = reader:trackPatch.LowPassWindowLen
2018-09-23T15:20:41.328Z,1537716041.328 [MissionManager](INFO): RedefineArg trackPatch:Science.PeakChlShallowBound = reader:trackPatch.PeakChlShallowBnd
2018-09-23T15:20:41.405Z,1537716041.405 [MissionManager](INFO): RedefineArg trackPatch:Science.PeakChlDeepBound = reader:trackPatch.PeakChlDeepBnd
2018-09-23T15:20:41.406Z,1537716041.406 [trackPatch:Science](CRITICAL): No Redefinable Arg named OffPeakFractionHorizontal
2018-09-23T15:20:41.406Z,1537716041.406 [MissionManager](INFO): RedefineArg trackPatch:Science.OffPeakFractionHorizontal = reader:trackPatch.OffPeakFraction
2018-09-23T15:20:41.407Z,1537716041.407 [trackPatch:K.SetSpeed](DEBUG): Construct.
2018-09-23T15:20:41.414Z,1537716041.414 [trackPatch:L.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-23T15:20:41.453Z,1537716041.453 [trackPatch:M.YoYo](DEBUG): Construct YoYo.
2018-09-23T15:20:41.477Z,1537716041.477 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-23T15:20:41.494Z,1537716041.494 [CommandLine](FAULT): Scheduling is paused
2018-09-23T15:20:41.494Z,1537716041.494 [CBIT](INFO): Critical error at 20180923T152041
2018-09-23T15:20:41.524Z,1537716041.524 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-23T15:20:41.554Z,1537716041.554 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-23T15:20:41.579Z,1537716041.579 [trackPatch:PatchDetectHorizontal:InLegWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-23T15:20:41.634Z,1537716041.634 [trackPatch:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-23T15:20:41.907Z,1537716041.907 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Trigger="Tethys/Trigger" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Trigger http://okeanids.mbari.org/tethys/Xml/Trigger.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="trackPatch">

    <Description>
        Vehicle runs yo-yos, with patch detect enabled for cholorphyll
        concentration.
    </Description>

<!-- Vehicle safety parameters -->

    <DefineArg Name="MinAltitude"><Description>
        Minimum altitude for the entire mission.
    </Description><Units:meter/><Value>5</Value></DefineArg>

    <DefineArg Name="MaxDepth"><Description>
        Maximum depth for the entire mission.
    </Description><Units:meter/><Value>65</Value></DefineArg>

    <DefineArg Name="MinWaterDepth"><Description>
        Minimum water depth for the entire mission.
    </Description><Units:meter/><Value>10</Value></DefineArg>

    <DefineArg Name="MinOffshore"><Description>
        Minimum offshore distance for the entire mission.
    </Description><Units:meter/><Value>2000</Value></DefineArg>

    <DefineArg Name="NeedCommsTime"><Description>
        Maximum time between surfacings for communications
    </Description><Units:minute/><Value>180</Value></DefineArg>

    <DefineArg Name="MissionTimeout"><Description>
        Timeout for the entire mission
    </Description><Units:hour/><Value>56</Value></DefineArg>

    <DefineArg Name="MassDefault"><Description>
        Static setting for mass during the mission. Defaults to massDefault
        setting in the Config/Control.cfg file.
    </Description><Control:VerticalControl.massDefault/></DefineArg>

    <DefineArg Name="BuoyancyNeutral"><Description>
        Buoyancy bladder position while performing the YoYo behavior. Defaults
        to buoyancyNeutral setting in the Config/Control.cfg file.
    </Description><Control:VerticalControl.buoyancyNeutral/></DefineArg>

<!-- Basic guidance settings -->

    <DefineArg Name="YoYoMinDepth"><Description>
        Minimum depth during yo-yo's.
    </Description><Units:meter/><Value>2.0</Value></DefineArg>

    <DefineArg Name="YoYoMaxDepth"><Description>
        Maximum depth during yo-yo's.
    </Description><Units:meter/><Value>10.0</Value></DefineArg>

    <DefineArg Name="YoYoUpPitch"><Description>
        Pitch when yo-yo's are ascending.
    </Description><Units:degree/><Value>20.0</Value></DefineArg>

    <DefineArg Name="YoYoDownPitch"><Description>
        Pitch when yo-yo's are descending.
    </Description><Units:degree/><Value>-20.0</Value></DefineArg>

    <DefineArg Name="Speed"><Description>
        Vehicle speed.
    </Description><Units:meter_per_second/><Value>1</Value></DefineArg>

    <DefineArg Name="WpMaxDistance"><Description>
        Maximum length of each tracking leg
<!--debug
    </Description><Units:meter/><Value>7500</Value></DefineArg>
-->
    </Description><Units:meter/><Value>1000</Value></DefineArg>

    <DefineArg Name="WpTimeout"><Description>
        Maximum duration of each tracking leg
    </Description><Units:second/><Value>8000</Value></DefineArg>

    <DefineArg Name="WaterFrame"><Description>
        Set WaterFrame true to drive towards waypoints in the water frame of
        reference
    </Description><True/></DefineArg>

    <DefineArg Name="Repeat"><Description>
        Maximum number of tracking legs
    </Description><Units:count/><Value>20</Value></DefineArg>

<!-- Constant settings for each tracking leg -->

    <DefineArg Name="Turn"><Description>
        Amount to turn at each leg
    </Description><Units:degree/><Value>90</Value></DefineArg>

    <DefineArg Name="Reverse"><Description>
        Change in bearing which reverses vehicle direction
    </Description><Units:degree/><Value>180</Value></DefineArg>

    <DefineArg Name="TwoPi"><Description>
        Applied to stop run-up of angles
    </Description><Units:degree/><Value>360</Value></DefineArg>

    <DefineArg Name="LowPassWindowLen"><Description>
        Low-pass window length (based on depth sensor sampling interval 0.4
        second) for low-pass filtering.
    </Description><Units:count/><Value>20</Value></DefineArg>

    <DefineArg Name="PeakChlShallowBnd"><Description>
        Shallow depth bound for detecting chl peak on each descent or ascent
        profile.
<!--debug
    </Description><Units:meter/><Value>NaN</Value></DefineArg>
-->
    </Description><Units:meter/><Value>3</Value></DefineArg>

    <DefineArg Name="PeakChlDeepBnd"><Description>
        Deep depth bound for detecting chl peak on each descent or ascent
        profile.
<!--debug
    </Description><Units:meter/><Value>NaN</Value></DefineArg>
-->
    </Description><Units:meter/><Value>8</Value></DefineArg>

    <DefineArg Name="FilterWidth"><Description>
        Width of boxcar filter used in horizontal patch detection
    </Description><Units:count/><Value>4</Value></DefineArg>

    <DefineArg Name="BeginThreshold"><Description>
        If non-NaN, sets threshold for starting horizontal patch detection
    </Description><Units:microgram_per_liter/><Value>NaN</Value></DefineArg>

    <DefineArg Name="OffPeakFraction"><Description>
        When filtered horizontal value is this fraction of the peak, consider it
        outside the patch.
    </Description><Units:percent/><Value>80</Value></DefineArg>

    <DefineArg Name="PatchMode"><Description>
        If true, use center of "in peak" range as the turn-around point. If
        false use maximum horizontal peak location as the turn-around point.
    </Description><False/></DefineArg>

<!-- Variable Settings for each tracking leg -->

    <DefineArg Name="WpBearing"><Description>
        Bearing being followed in the current leg. Set this to initialize start
        direction of patch tracking.
    </Description><Units:degree/><Value>-90</Value></DefineArg>

    <DefineOutput Name="PatchDetectOn"><Description>
        Mission sets this to true when the patch has been crossed.
    </Description><False/></DefineOutput>

    <DefineOutput Name="WpDone"><Description>
        Mission sets this to true when the cross-patch waypoint has been
        reached.
    </Description><False/></DefineOutput>

    <DefineOutput Name="PatchChl"><Units:microgram_per_liter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlDepth"><Units:meter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchChlDistance"><Units:meter/><Value>0</Value></DefineOutput>

<!-- The timeout -->

    <Timeout Duration="MissionTimeout"/>

<!-- And now the mission -->

    <Guidance:AltitudeEnvelope>
        <Parallel/>
        <Setting><Guidance:AltitudeEnvelope.minAltitude/><Arg Name="MinAltitude"/></Setting>
    </Guidance:AltitudeEnvelope>

    <Guidance:DepthEnvelope>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="MaxDepth"/></Setting>
    </Guidance:DepthEnvelope>

    <Insert Filename="Insert/Surface.xml" Id="SurfaceCommsSplit">
        <RedefineArg Name="SurfacePitch"><Units:degree/><Value>20</Value></RedefineArg>
        <RedefineArg Name="SurfaceSpeed"><Units:meter_per_second/><Value>1</Value></RedefineArg>
        <RedefineArg Name="UnpackSplitAtSurface"><True/></RedefineArg>
    </Insert>

    <Aggregate Id="SurfaceComms">

        <When>
            <Called/>
        </When>

        <Insert Filename="Insert/Surface.xml">
            <RedefineArg Name="SurfacePitch"><Units:degree/><Value>20</Value></RedefineArg>
            <RedefineArg Name="SurfaceSpeed"><Units:meter_per_second/><Value>1</Value></RedefineArg>
        </Insert>

    </Aggregate>

<!-- GPS Update.  Don't go too long w/o a GPS fix. -->

    <Aggregate Id="NeedComms">

        <When>
            <Universal:platform_pitch_angle/>
            <Gt><Units:degree/><Value>0</Value></Gt>
            <And><Elapsed><Universal:time_fix/></Elapsed><Gt><Arg Name="NeedCommsTime"/></Gt></And>
            <Or><Elapsed><Universal:time_fix/></Elapsed><Gt><Arg Name="NeedCommsTime"/><Add><Units:minute/><Value>10</Value></Add></Gt></Or>
        </When>

        <Syslog Severity="Important">NeedComms Timeout Surfacing</Syslog>

        <Call RefId="SurfaceComms"/>

    </Aggregate>

    <Guidance:OffshoreEnvelope>
        <Parallel/>
        <Setting><Guidance:OffshoreEnvelope.minOffshore/><Arg Name="MinOffshore"/></Setting>
    </Guidance:OffshoreEnvelope>

    <Guidance:WaterDepthEnvelope>
        <Parallel/>
        <Setting><Guidance:WaterDepthEnvelope.minWaterDepth/><Arg Name="MinWaterDepth"/></Setting>
    </Guidance:WaterDepthEnvelope>

    <Guidance:Pitch>
        <Parallel/>
        <Setting><Guidance:Pitch.massPosition/><Arg Name="MassDefault"/></Setting>
    </Guidance:Pitch>

    <Guidance:Buoyancy>
        <Parallel/>
        <Setting><Guidance:Buoyancy.position /><Arg Name="BuoyancyNeutral"/></Setting>
    </Guidance:Buoyancy>

<!-- If we're executing here or below, lets' get science data! -->

    <Insert Filename="Insert/Science.xml">
        <RedefineArg Name="PeakDetectChlActive"><True/></RedefineArg>
        <RedefineArg Name="PatchTracking"><True/></RedefineArg>
        <RedefineArg Name="LowPassWindowLength"><Arg Name="LowPassWindowLen"/></RedefineArg>
        <RedefineArg Name="PeakChlShallowBound"><Arg Name="PeakChlShallowBnd"/></RedefineArg>
        <RedefineArg Name="PeakChlDeepBound"><Arg Name="PeakChlDeepBnd"/></RedefineArg>
        <RedefineArg Name="OffPeakFractionHorizontal"><Arg Name="OffPeakFraction"/></RedefineArg>
    </Insert>

    <Guidance:SetSpeed>
        <Parallel/>
        <Setting><Guidance:SetSpeed.speed/><Arg Name="Speed"/></Setting>
    </Guidance:SetSpeed>

    <Guidance:DepthEnvelope>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.minDepth/><Arg Name="YoYoMinDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="YoYoMaxDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:DepthEnvelope.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:DepthEnvelope>

    <Guidance:YoYo>
        <Parallel/>
        <Setting><Guidance:YoYo.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:YoYo.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:YoYo>

    <Aggregate Id="PatchDetectHorizontal">

        <Sequence Repeat="Repeat"/>

        <Aggregate Id="PatchDetection">

            <When>
                <Arg Name="PatchDetectOn"/>
            </When>

            <Trigger:PeakDetectHorizontal Id="PeakDetectHorizontalTrigger">
                <Sequence/>
<!--debug
                <Break><Arg Name="WpDone"/>
                </Break>
-->
                <Setting><Trigger:PeakDetectHorizontal.patchTracking/><Units:bool/><Value>1</Value></Setting>
                <Setting><Trigger:PeakDetectHorizontal.detectFrom/><Arg Name="Science:PeakChl"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.depthFrom/><Arg Name="Science:PeakChlDepth"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.latitudeFrom/><Arg Name="Science:PeakChlLatitude"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.longitudeFrom/><Arg Name="Science:PeakChlLongitude"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.beginThreshold/><Arg Name="BeginThreshold"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.offPeakFraction/><Arg Name="OffPeakFraction"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.filterWidth/><Arg Name="FilterWidth"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.centerPeak/><Arg Name="PatchMode"/></Setting>
                <OutputArg Name="PatchChl"><Trigger:PeakDetectHorizontal.peakDetect/></OutputArg>
                <OutputArg Name="PatchChlDepth"><Trigger:PeakDetectHorizontal.peakDepth/></OutputArg>
                <OutputArg Name="PatchChlLatitude"><Trigger:PeakDetectHorizontal.peakLatitude/></OutputArg>
                <OutputArg Name="PatchChlLongitude"><Trigger:PeakDetectHorizontal.peakLongitude/></OutputArg>
                <OutputArg Name="PatchChlDistance"><Trigger:PeakDetectHorizontal.peakDistance/></OutputArg>
            </Trigger:PeakDetectHorizontal>

            <Syslog Severity="Important">Fell below OffPeakFraction. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Arg Name="PatchChlDepth"/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog>

            <SendData Service="Express"><Arg Name="PatchChl"/><Arg Name="PatchChlDepth"/><Arg Name="PatchChlLatitude"/><Arg Name="PatchChlLongitude"/>
            </SendData>

            <Assign Id="AssignPatchDetectOff"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

        </Aggregate>

        <Assign Id="AssignPatchDetectOn"><Sequence/><Arg Name="PatchDetectOn"/><True/></Assign>

        <Syslog Severity="Important">Next: bearing for CrossLeg: <Arg Name="WpBearing"/><Units:degree/>. WpMaxDistance = <Arg Name="WpMaxDistance"/><Units:meter/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>.</Syslog>

        <Aggregate Id="CrossLeg">

            <Description>
                This is a long leg across the width of the patch. Also the first
                leg in a mission run. Two waypoints run in parallel: a short run
                to the surfacing point, and a longer run to the edge of the
                patch.
            </Description>

            <Sequence/>

            <Break><Arg Name="WpDone"/>
                <Or><Arg Name="PatchDetectOn"/><Eq><False/></Eq></Or>
            </Break>

            <Guidance:Waypoint Id="CrossSurfaceWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="PatchChlDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Call RefId="SurfaceComms"/>

            <Guidance:Waypoint Id="CrossPeakWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="WpMaxDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

<!--debug-->
            <Syslog Severity="Important">CrossPeakWp done. Lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Arg Name="PatchChlDepth"/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog> 

            <Assign Id="AssignPatchDetectOffInCrossLeg"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

            <Assign Id="AssignWpDoneInCrossLeg"><Sequence/><Arg Name="WpDone"/><True/></Assign>

        </Aggregate>

        <Assign Id="AssignWpBearingForInLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Add><Arg Name="Reverse"/></Add><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

        <Syslog Severity="Important">Next: bearing for InLeg: <Arg Name="WpBearing"/><Units:degree/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Arg Name="PatchChlDepth"/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog> 

        <Guidance:Waypoint Id="InLegWp">
            <Description>
                Simply drive back towards the patch center
            </Description>
            <Sequence/>
            <Timeout Duration="WpTimeout"/>
            <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="PatchChlDistance"/></Setting>
            <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
            <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
        </Guidance:Waypoint>

        <Assign Id="AssignWpBearingForOutLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Sub><Arg Name="Turn"/></Sub><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

        <Syslog Severity="Important">Next: bearing for OutLeg: <Arg Name="WpBearing"/><Units:degree/>. WpMaxDistance = <Arg Name="WpMaxDistance"/><Units:meter/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Arg Name="PatchChlDepth"/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog>

        <Call RefId="SurfaceCommsSplit"/>

        <Assign Id="AssignPatchDetectOnForOutLeg"><Sequence/><Arg Name="PatchDetectOn"/><True/></Assign>

        <Aggregate Id="OutLeg">

            <Description>
                Drive outward until edge of patch is detected.
            </Description>

            <Sequence/>

            <Break><Arg Name="WpDone"/>
                <Or><Arg Name="PatchDetectOn"/><Eq><False/></Eq></Or>
            </Break>

            <Guidance:Waypoint Id="OutLegWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="WpMaxDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Assign Id="AssignPatchDetectOffInOutLeg"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

            <Assign Id="AssignWpDoneInOutLeg"><Sequence/><Arg Name="WpDone"/><True/></Assign>

        </Aggregate>

        <Assign Id="AssignWpBearingForCrossLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Add><Arg Name="Reverse"/></Add><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

    </Aggregate>

</Mission>


2018-09-23T15:20:41.908Z,1537716041.908 [CommandLine](IMPORTANT): Loaded ./Missions/Science/trackPatch.xml
2018-09-23T15:20:55.991Z,1537716055.991 [CommandLine](IMPORTANT): got command show variable peakDetect
2018-09-23T15:20:56.116Z,1537716056.116 [CommandLine](IMPORTANT): trackPatch:Science.PeakDetectChlActive (bool)
2018-09-23T15:20:56.117Z,1537716056.117 [CommandLine](IMPORTANT): trackPatch:Science.PeakDetectNO3Active (bool)
2018-09-23T15:20:56.117Z,1537716056.117 [CommandLine](IMPORTANT): trackPatch:Science.PeakDetectOilActive (bool)
2018-09-23T15:21:08.066Z,1537716068.066 [CommandLine](IMPORTANT): got command get trackPatch:Science.PeakDetectChlActive
2018-09-23T15:21:08.067Z,1537716068.067 [CommandLine](IMPORTANT): trackPatch:Science.PeakDetectChlActive 0 bool
2018-09-23T15:21:42.231Z,1537716102.231 [CommandLine](IMPORTANT): got command set trackPatch:Science.PeakDetectChlActive 1.000000 bool
2018-09-23T15:22:28.435Z,1537716148.435 [CommandLine](IMPORTANT): got command set trackPatch.MissionTimeout 30.000000 minute
2018-09-23T15:22:28.436Z,1537716148.436 [CommandLine](IMPORTANT): got command set trackPatch.YoYoMinDepth 2.000000 meter
2018-09-23T15:22:28.437Z,1537716148.437 [CommandLine](IMPORTANT): got command set trackPatch.YoYoMaxDepth 10.000000 meter
2018-09-23T15:22:28.438Z,1537716148.438 [CommandLine](IMPORTANT): got command set trackPatch.PeakChlShallowBnd 3.000000 meter
2018-09-23T15:22:28.438Z,1537716148.438 [CommandLine](IMPORTANT): got command set trackPatch.PeakChlDeepBnd 8.000000 meter
2018-09-23T15:22:31.624Z,1537716151.624 [NAL9602](INFO): GPS fix at 20180923T152222: (36.843728, -121.905163)
2018-09-23T15:22:31.668Z,1537716151.668 [Default:CheckIn:Read_GPS] Stopped
2018-09-23T15:22:31.668Z,1537716151.668 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-23T15:22:37.112Z,1537716157.112 [DataOverHttps](INFO): Sending 155 bytes from file Logs/20180923T135420/Courier0052.lzma
2018-09-23T15:22:37.874Z,1537716157.874 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Courier0052.lzma.bak
2018-09-23T15:22:37.874Z,1537716157.874 [DataOverHttps](INFO): SBD MOMSN=8567696
2018-09-23T15:22:44.625Z,1537716164.625 [CommandLine](IMPORTANT): got command show variable peakchl
2018-09-23T15:22:44.729Z,1537716164.729 [CommandLine](IMPORTANT): trackPatch.PeakChlShallowBnd (meter)
2018-09-23T15:22:44.729Z,1537716164.729 [CommandLine](IMPORTANT): trackPatch.PeakChlDeepBnd (meter)
2018-09-23T15:22:44.733Z,1537716164.733 [CommandLine](IMPORTANT): trackPatch:Science.PeakChlShallowBound (meter)
2018-09-23T15:22:44.734Z,1537716164.734 [CommandLine](IMPORTANT): trackPatch:Science.PeakChlDeepBound (meter)
2018-09-23T15:22:44.734Z,1537716164.734 [CommandLine](IMPORTANT): trackPatch:Science.PeakChl (microgram_per_liter)
2018-09-23T15:22:44.735Z,1537716164.735 [CommandLine](IMPORTANT): trackPatch:Science.PeakChlDepth (meter)
2018-09-23T15:22:44.735Z,1537716164.735 [CommandLine](IMPORTANT): trackPatch:Science.PeakChlTemperature (celsius)
2018-09-23T15:22:44.736Z,1537716164.736 [CommandLine](IMPORTANT): trackPatch:Science.PeakChlLatitude (degree)
2018-09-23T15:22:44.736Z,1537716164.736 [CommandLine](IMPORTANT): trackPatch:Science.PeakChlLongitude (degree)
2018-09-23T15:22:50.952Z,1537716170.952 [DataOverHttps](INFO): Sending 1335 bytes from file Logs/20180923T135420/Express0053.lzma
2018-09-23T15:22:51.739Z,1537716171.739 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Express0053.lzma.bak
2018-09-23T15:22:51.739Z,1537716171.739 [DataOverHttps](INFO): SBD MOMSN=8567700
2018-09-23T15:22:52.274Z,1537716172.274 [Default:CheckIn:Read_Iridium] Stopped
2018-09-23T15:22:52.274Z,1537716172.274 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-23T15:22:52.274Z,1537716172.274 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-23T15:22:55.451Z,1537716175.451 [CommandLine](IMPORTANT): got command get trackPatch:Science.PeakChl
2018-09-23T15:22:55.452Z,1537716175.452 [CommandLine](IMPORTANT): trackPatch:Science.PeakChl 0.000000 ug/l
2018-09-23T15:23:01.998Z,1537716181.998 [CommandLine](IMPORTANT): got command report mod trackPatch:Science.PeakChl
2018-09-23T15:23:02.188Z,1537716182.188 [Reporter](INFO): trackPatch:Science.PeakChl 0.000000 ug/l
2018-09-23T15:23:07.278Z,1537716187.278 [NAL9602](INFO): Powering down
2018-09-23T15:23:09.676Z,1537716189.676 [CommandLine](IMPORTANT): got command run
2018-09-23T15:23:09.691Z,1537716189.691 [CommandLine](IMPORTANT): Running 
2018-09-23T15:23:09.728Z,1537716189.728 [Default] Stopped
2018-09-23T15:23:09.728Z,1537716189.728 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-23T15:23:09.728Z,1537716189.728 [Default:B.GoToSurface] Stopped
2018-09-23T15:23:09.729Z,1537716189.729 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-23T15:23:09.741Z,1537716189.741 [Default:CheckIn] Stopped
2018-09-23T15:23:09.741Z,1537716189.741 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-23T15:23:09.741Z,1537716189.741 [Default:CheckIn:C.Wait] Stopped
2018-09-23T15:23:09.741Z,1537716189.741 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-23T15:23:09.741Z,1537716189.741 [MissionManager](IMPORTANT): Started mission trackPatch
2018-09-23T15:23:09.742Z,1537716189.742 [trackPatch] Running Loop=1
2018-09-23T15:23:09.742Z,1537716189.742 [trackPatch](DEBUG): Aggregate::initialize trackPatch
2018-09-23T15:23:09.742Z,1537716189.742 [trackPatch:A.AltitudeEnvelope] Running Loop=1
2018-09-23T15:23:09.742Z,1537716189.742 [trackPatch:A.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-23T15:23:09.742Z,1537716189.742 [trackPatch:B.DepthEnvelope] Running Loop=1
2018-09-23T15:23:09.742Z,1537716189.742 [trackPatch:B.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-23T15:23:09.743Z,1537716189.743 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-23T15:23:09.743Z,1537716189.743 [trackPatch:F.OffshoreEnvelope](DEBUG): Initialize OffshoreEnvelopeComponent.
2018-09-23T15:23:09.743Z,1537716189.743 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-23T15:23:09.743Z,1537716189.743 [trackPatch:G.WaterDepthEnvelope](DEBUG): Initialize WaterDepthEnvelopeComponent.
2018-09-23T15:23:09.743Z,1537716189.743 [trackPatch:H.Pitch] Running Loop=1
2018-09-23T15:23:09.743Z,1537716189.743 [trackPatch:H.Pitch](DEBUG): Initialize.
2018-09-23T15:23:09.743Z,1537716189.743 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-23T15:23:09.743Z,1537716189.743 [trackPatch:I.Buoyancy](DEBUG): Initialize Buoyancy Component.
2018-09-23T15:23:09.743Z,1537716189.743 [trackPatch:Science] Running Loop=1
2018-09-23T15:23:09.744Z,1537716189.744 [trackPatch:Science](DEBUG): Aggregate::initialize trackPatch:Science
2018-09-23T15:23:09.744Z,1537716189.744 [trackPatch:Science:A] Running Loop=1
2018-09-23T15:23:09.744Z,1537716189.744 [trackPatch:Science:B] Running Loop=1
2018-09-23T15:23:09.744Z,1537716189.744 [trackPatch:Science:C] Running Loop=1
2018-09-23T15:23:09.744Z,1537716189.744 [trackPatch:Science:D] Running Loop=1
2018-09-23T15:23:09.744Z,1537716189.744 [trackPatch:Science:E] Running Loop=1
2018-09-23T15:23:09.744Z,1537716189.744 [trackPatch:Science:F] Running Loop=1
2018-09-23T15:23:09.744Z,1537716189.744 [trackPatch:Science:G] Running Loop=1
2018-09-23T15:23:09.744Z,1537716189.744 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-23T15:23:09.744Z,1537716189.744 [trackPatch:Science:PeakDetectChl] Running Loop=1
2018-09-23T15:23:09.744Z,1537716189.744 [trackPatch:Science:PeakDetectChl](DEBUG): Aggregate::initialize trackPatch:Science:PeakDetectChl
2018-09-23T15:23:09.749Z,1537716189.749 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2018-09-23T15:23:09.749Z,1537716189.749 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-23T15:23:09.750Z,1537716189.750 [trackPatch:Science:HighestChlPeakReport] Running Loop=1
2018-09-23T15:23:09.750Z,1537716189.750 [trackPatch:Science:HighestChlPeakReport](DEBUG): Aggregate::initialize trackPatch:Science:HighestChlPeakReport
2018-09-23T15:23:09.750Z,1537716189.750 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2018-09-23T15:23:09.750Z,1537716189.750 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2018-09-23T15:23:09.751Z,1537716189.751 [trackPatch:Science:PeakDetectNO3] Running Loop=1
2018-09-23T15:23:09.751Z,1537716189.751 [trackPatch:Science:PeakDetectNO3](DEBUG): Aggregate::initialize trackPatch:Science:PeakDetectNO3
2018-09-23T15:23:09.751Z,1537716189.751 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2018-09-23T15:23:09.751Z,1537716189.751 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-23T15:23:09.752Z,1537716189.752 [trackPatch:Science:PeakDetectOil] Running Loop=1
2018-09-23T15:23:09.752Z,1537716189.752 [trackPatch:Science:PeakDetectOil](DEBUG): Aggregate::initialize trackPatch:Science:PeakDetectOil
2018-09-23T15:23:09.753Z,1537716189.753 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2018-09-23T15:23:09.761Z,1537716189.761 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-23T15:23:09.762Z,1537716189.762 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-23T15:23:09.762Z,1537716189.762 [trackPatch:K.SetSpeed](DEBUG): Initialize.
2018-09-23T15:23:09.762Z,1537716189.762 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-23T15:23:09.762Z,1537716189.762 [trackPatch:L.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-23T15:23:09.763Z,1537716189.763 [trackPatch:M.YoYo] Running Loop=1
2018-09-23T15:23:09.763Z,1537716189.763 [trackPatch:M.YoYo](DEBUG): Initialize YoYoComponent.
2018-09-23T15:23:09.763Z,1537716189.763 [trackPatch:SurfaceCommsSplit] Running Loop=1
2018-09-23T15:23:09.763Z,1537716189.763 [trackPatch:SurfaceCommsSplit](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit
2018-09-23T15:23:09.763Z,1537716189.763 [trackPatch:SurfaceCommsSplit:A.GoToSurface] Running Loop=1
2018-09-23T15:23:09.763Z,1537716189.763 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T15:23:09.764Z,1537716189.764 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-23T15:23:09.764Z,1537716189.764 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-23T15:23:09.769Z,1537716189.769 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-23T15:23:09.769Z,1537716189.769 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T15:23:09.770Z,1537716189.770 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T15:23:09.771Z,1537716189.771 [trackPatch:M.YoYo] Running Loop=1
2018-09-23T15:23:09.772Z,1537716189.772 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-23T15:23:09.778Z,1537716189.778 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-23T15:23:09.779Z,1537716189.779 [trackPatch:Science] Running Loop=1
2018-09-23T15:23:09.788Z,1537716189.788 [trackPatch:Science:PeakDetectOil] Stopped
2018-09-23T15:23:09.793Z,1537716189.793 [trackPatch:Science:PeakDetectOil](DEBUG): Aggregate::uninitialize trackPatch:Science:PeakDetectOil
2018-09-23T15:23:09.793Z,1537716189.793 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2018-09-23T15:23:09.793Z,1537716189.793 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-23T15:23:09.793Z,1537716189.793 [trackPatch:Science:PeakDetectNO3] Stopped
2018-09-23T15:23:09.793Z,1537716189.793 [trackPatch:Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize trackPatch:Science:PeakDetectNO3
2018-09-23T15:23:09.793Z,1537716189.793 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2018-09-23T15:23:09.793Z,1537716189.793 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-23T15:23:09.794Z,1537716189.794 [trackPatch:Science:HighestChlPeakReport] Stopped
2018-09-23T15:23:09.794Z,1537716189.794 [trackPatch:Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize trackPatch:Science:HighestChlPeakReport
2018-09-23T15:23:09.794Z,1537716189.794 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2018-09-23T15:23:09.794Z,1537716189.794 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-23T15:23:09.794Z,1537716189.794 [trackPatch:Science:PeakDetectChl] Running Loop=1
2018-09-23T15:23:09.795Z,1537716189.795 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-23T15:23:09.795Z,1537716189.795 [trackPatch:Science:Read_Oil](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-23T15:23:09.796Z,1537716189.796 [trackPatch:Science:G] Running Loop=1
2018-09-23T15:23:09.797Z,1537716189.797 [trackPatch:Science:G](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-23T15:23:09.798Z,1537716189.798 [trackPatch:Science:F] Stopped
2018-09-23T15:23:09.798Z,1537716189.798 [trackPatch:Science:E] Stopped
2018-09-23T15:23:09.798Z,1537716189.798 [trackPatch:Science:D] Stopped
2018-09-23T15:23:09.798Z,1537716189.798 [trackPatch:Science:C] Stopped
2018-09-23T15:23:09.798Z,1537716189.798 [trackPatch:Science:B] Stopped
2018-09-23T15:23:09.799Z,1537716189.799 [trackPatch:Science:A] Stopped
2018-09-23T15:23:09.799Z,1537716189.799 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-23T15:23:09.800Z,1537716189.800 [trackPatch:H.Pitch] Running Loop=1
2018-09-23T15:23:09.809Z,1537716189.809 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-23T15:23:09.810Z,1537716189.810 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-23T15:23:09.816Z,1537716189.816 [trackPatch:SurfaceCommsSplit:B] Running Loop=1
2018-09-23T15:23:09.816Z,1537716189.816 [trackPatch:SurfaceCommsSplit:B](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit:B
2018-09-23T15:23:09.816Z,1537716189.816 [trackPatch:SurfaceCommsSplit:B:A] Running Loop=1
2018-09-23T15:23:09.816Z,1537716189.816 [trackPatch:B.DepthEnvelope] Running Loop=1
2018-09-23T15:23:09.826Z,1537716189.826 [trackPatch:A.AltitudeEnvelope] Running Loop=1
2018-09-23T15:23:10.074Z,1537716190.074 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-23T15:23:10.075Z,1537716190.075 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-23T15:23:10.152Z,1537716190.152 [trackPatch:SurfaceCommsSplit:B:A](INFO): ##UnpackSplit##
2018-09-23T15:23:10.158Z,1537716190.158 [trackPatch:SurfaceCommsSplit:B:A] Stopped
2018-09-23T15:23:10.158Z,1537716190.158 [trackPatch:SurfaceCommsSplit:B](INFO): Completed trackPatch:SurfaceCommsSplit:B
2018-09-23T15:23:10.158Z,1537716190.158 [trackPatch:SurfaceCommsSplit:B] Stopped
2018-09-23T15:23:10.158Z,1537716190.158 [trackPatch:SurfaceCommsSplit:B](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit:B
2018-09-23T15:23:10.158Z,1537716190.158 [trackPatch:SurfaceCommsSplit:C] Running Loop=1
2018-09-23T15:23:10.158Z,1537716190.158 [trackPatch:SurfaceCommsSplit:C](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit:C
2018-09-23T15:23:10.158Z,1537716190.158 [trackPatch:SurfaceCommsSplit:C:A] Running Loop=1
2018-09-23T15:23:10.524Z,1537716190.524 [trackPatch:M.YoYo] Preempted
2018-09-23T15:23:10.524Z,1537716190.524 [trackPatch:L.DepthEnvelope] Preempted
2018-09-23T15:23:10.524Z,1537716190.524 [trackPatch:K.SetSpeed] Preempted
2018-09-23T15:23:10.524Z,1537716190.524 [trackPatch:Science] Preempted
2018-09-23T15:23:10.524Z,1537716190.524 [trackPatch:Science:G] Preempted
2018-09-23T15:23:10.524Z,1537716190.524 [trackPatch:Science:Read_Oil] Preempted
2018-09-23T15:23:10.525Z,1537716190.525 [trackPatch:Science:PeakDetectChl] Preempted
2018-09-23T15:23:10.525Z,1537716190.525 [trackPatch:I.Buoyancy] Preempted
2018-09-23T15:23:10.525Z,1537716190.525 [trackPatch:H.Pitch] Preempted
2018-09-23T15:23:10.525Z,1537716190.525 [trackPatch:G.WaterDepthEnvelope] Preempted
2018-09-23T15:23:10.525Z,1537716190.525 [trackPatch:F.OffshoreEnvelope] Preempted
2018-09-23T15:23:10.526Z,1537716190.526 [trackPatch:SurfaceCommsSplit:C:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-23T15:23:10.878Z,1537716190.878 [NAL9602](INFO): Powering up
2018-09-23T15:23:12.238Z,1537716192.238 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-23T15:23:21.674Z,1537716201.674 [NAL9602](INFO): NAL9602 initialized
2018-09-23T15:23:31.746Z,1537716211.746 [CommandLine](IMPORTANT): got command show variable mass_conc
2018-09-23T15:23:31.749Z,1537716211.749 [CommandLine](IMPORTANT): mass_concentration_of_chlorophyll_in_sea_water (unknown)
2018-09-23T15:23:31.749Z,1537716211.749 [CommandLine](IMPORTANT): mass_concentration_of_oxygen_in_sea_water (unknown)
2018-09-23T15:23:31.750Z,1537716211.750 [CommandLine](IMPORTANT): mass_concentration_of_petroleum_hydrocarbons_in_sea_water (unknown)
2018-09-23T15:23:31.916Z,1537716211.916 [CommandLine](IMPORTANT): WetLabsBB2FL.bin_median_mass_concentration_of_chlorophyll_in_sea_water (microgram_per_liter)
2018-09-23T15:23:31.917Z,1537716211.917 [CommandLine](IMPORTANT): WetLabsBB2FL.bin_mean_mass_concentration_of_chlorophyll_in_sea_water (microgram_per_liter)
2018-09-23T15:23:31.917Z,1537716211.917 [CommandLine](IMPORTANT): WetLabsBB2FL.bin_variance_mass_concentration_of_chlorophyll_in_sea_water (microgram_per_liter)
2018-09-23T15:23:31.918Z,1537716211.918 [CommandLine](IMPORTANT): WetLabsBB2FL.mass_concentration_of_chlorophyll_in_sea_water (microgram_per_liter)
2018-09-23T15:23:31.918Z,1537716211.918 [CommandLine](IMPORTANT): WetLabsSeaOWL_UV_A.mass_concentration_of_petroleum_hydrocarbons_in_sea_water (kilogram_per_cubic_meter)
2018-09-23T15:23:31.919Z,1537716211.919 [CommandLine](IMPORTANT): WetLabsSeaOWL_UV_A.mass_concentration_of_chlorophyll_in_sea_water (microgram_per_liter)
2018-09-23T15:23:44.080Z,1537716224.080 [NAL9602](INFO): SBD MO Status=0, MOMSN=1295, MT Status=0, MTMSN=0
2018-09-23T15:23:44.080Z,1537716224.080 [NAL9602](INFO): No messages in MT queue
2018-09-23T15:23:49.048Z,1537716229.048 [CommandLine](IMPORTANT): got command show best mass_concentration_of_chlorophyll_in_sea_water
2018-09-23T15:23:49.049Z,1537716229.049 [CommandLine](IMPORTANT): mass_concentration_of_chlorophyll_in_sea_water best is null
2018-09-23T15:23:57.993Z,1537716237.993 [CommandLine](IMPORTANT): got command show stack
2018-09-23T15:23:57.993Z,1537716237.993 [CommandLine](IMPORTANT): Behavior Stack:

2018-09-23T15:23:57.994Z,1537716237.994 [trackPatch](IMPORTANT): Priority 0: trackPatch:A.AltitudeEnvelope
2018-09-23T15:23:57.994Z,1537716237.994 [trackPatch](IMPORTANT): Priority 1: trackPatch:B.DepthEnvelope
2018-09-23T15:23:57.994Z,1537716237.994 [trackPatch:SurfaceCommsSplit](IMPORTANT): Priority 2: trackPatch:SurfaceCommsSplit:A.GoToSurface
2018-09-23T15:23:57.995Z,1537716237.995 [trackPatch:SurfaceCommsSplit:C](IMPORTANT): Priority 3: trackPatch:SurfaceCommsSplit:C:A
2018-09-23T15:25:05.672Z,1537716305.672 [NAL9602](INFO): GPS fix at 20180923T152455: (36.843839, -121.905312)
2018-09-23T15:25:05.758Z,1537716305.758 [trackPatch:SurfaceCommsSplit:C:A] Stopped
2018-09-23T15:25:05.758Z,1537716305.758 [trackPatch:SurfaceCommsSplit:C:B] Running Loop=1
2018-09-23T15:25:06.141Z,1537716306.141 [trackPatch:SurfaceCommsSplit:C:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-23T15:25:08.462Z,1537716308.462 [CommandLine](IMPORTANT): got command set NAL9602.platform_communications 1.000000 bool
2018-09-23T15:25:10.343Z,1537716310.343 [DataOverHttps](INFO): Sending 64 bytes from file Logs/20180923T135420/Courier0055.lzma
2018-09-23T15:25:11.097Z,1537716311.097 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Courier0055.lzma.bak
2018-09-23T15:25:11.098Z,1537716311.098 [DataOverHttps](INFO): SBD MOMSN=8567796
2018-09-23T15:25:20.329Z,1537716320.329 [DataOverHttps](INFO): Sending 702 bytes from file Logs/20180923T135420/Express0056.lzma
2018-09-23T15:25:21.081Z,1537716321.081 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Express0056.lzma.bak
2018-09-23T15:25:21.082Z,1537716321.082 [DataOverHttps](INFO): SBD MOMSN=8567799
2018-09-23T15:25:21.616Z,1537716321.616 [trackPatch:SurfaceCommsSplit:C:B] Stopped
2018-09-23T15:25:21.617Z,1537716321.617 [trackPatch:SurfaceCommsSplit:C:C] Running Loop=1
2018-09-23T15:25:21.928Z,1537716321.928 [trackPatch:SurfaceCommsSplit:C:C](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-23T15:25:26.086Z,1537716326.086 [NAL9602](INFO): GPS fix at 20180923T152515: (36.843958, -121.905261)
2018-09-23T15:25:26.202Z,1537716326.202 [trackPatch:SurfaceCommsSplit:C:C] Stopped
2018-09-23T15:25:26.203Z,1537716326.203 [trackPatch:SurfaceCommsSplit:C](INFO): Completed trackPatch:SurfaceCommsSplit:C
2018-09-23T15:25:26.203Z,1537716326.203 [trackPatch:SurfaceCommsSplit:C] Stopped
2018-09-23T15:25:26.203Z,1537716326.203 [trackPatch:SurfaceCommsSplit:C](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit:C
2018-09-23T15:25:26.204Z,1537716326.204 [trackPatch:SurfaceCommsSplit](INFO): Completed trackPatch:SurfaceCommsSplit
2018-09-23T15:25:26.204Z,1537716326.204 [trackPatch:SurfaceCommsSplit] Stopped
2018-09-23T15:25:26.204Z,1537716326.204 [trackPatch:SurfaceCommsSplit](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit
2018-09-23T15:25:26.204Z,1537716326.204 [trackPatch:SurfaceCommsSplit:A.GoToSurface] Stopped
2018-09-23T15:25:26.204Z,1537716326.204 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-23T15:25:26.204Z,1537716326.204 [trackPatch:PatchDetectHorizontal] Running Loop=1
2018-09-23T15:25:26.213Z,1537716326.213 [trackPatch:PatchDetectHorizontal](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal
2018-09-23T15:25:26.213Z,1537716326.213 [trackPatch:PatchDetectHorizontal:AssignPatchDetectOn] Running Loop=1
2018-09-23T15:25:26.511Z,1537716326.511 [trackPatch:PatchDetectHorizontal:AssignPatchDetectOn] Stopped
2018-09-23T15:25:26.511Z,1537716326.511 [trackPatch:PatchDetectHorizontal:C] Running Loop=1
2018-09-23T15:25:26.511Z,1537716326.511 [trackPatch:M.YoYo] Running Loop=1
2018-09-23T15:25:26.512Z,1537716326.512 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-23T15:25:26.513Z,1537716326.513 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-23T15:25:26.521Z,1537716326.521 [trackPatch:Science] Running Loop=1
2018-09-23T15:25:26.523Z,1537716326.523 [trackPatch:Science:PeakDetectChl] Running Loop=1
2018-09-23T15:25:26.523Z,1537716326.523 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-23T15:25:26.523Z,1537716326.523 [trackPatch:Science:G] Running Loop=1
2018-09-23T15:25:26.523Z,1537716326.523 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-23T15:25:26.524Z,1537716326.524 [trackPatch:H.Pitch] Running Loop=1
2018-09-23T15:25:26.524Z,1537716326.524 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-23T15:25:26.533Z,1537716326.533 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-23T15:25:26.883Z,1537716326.883 [trackPatch:PatchDetectHorizontal:C](IMPORTANT): Next: bearing for CrossLeg: -90.000000 arcdeg . WpMaxDistance = 1000.000000 m . Current lat, lon = 36.843958 arcdeg , -121.905261 arcdeg .
2018-09-23T15:25:26.884Z,1537716326.884 [trackPatch:PatchDetectHorizontal:C] Stopped
2018-09-23T15:25:26.884Z,1537716326.884 [trackPatch:PatchDetectHorizontal:CrossLeg] Running Loop=1
2018-09-23T15:25:26.884Z,1537716326.884 [trackPatch:PatchDetectHorizontal:CrossLeg](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal:CrossLeg
2018-09-23T15:25:26.901Z,1537716326.901 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-23T15:25:26.901Z,1537716326.901 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-23T15:25:26.905Z,1537716326.905 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint] Running Loop=1
2018-09-23T15:25:26.905Z,1537716326.905 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-23T15:25:26.906Z,1537716326.906 [trackPatch:PatchDetectHorizontal:PatchDetection] Running Loop=1
2018-09-23T15:25:26.906Z,1537716326.906 [trackPatch:PatchDetectHorizontal:PatchDetection](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal:PatchDetection
2018-09-23T15:25:26.906Z,1537716326.906 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal] Running Loop=1
2018-09-23T15:25:26.906Z,1537716326.906 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](INFO): Initialize.
2018-09-23T15:25:27.328Z,1537716327.328 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint] Stopped
2018-09-23T15:25:27.328Z,1537716327.328 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-23T15:25:27.328Z,1537716327.328 [trackPatch:PatchDetectHorizontal:CrossLeg:B] Running Loop=1
2018-09-23T15:25:27.328Z,1537716327.328 [trackPatch:PatchDetectHorizontal:CrossLeg:B](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal:CrossLeg:B
2018-09-23T15:25:27.719Z,1537716327.719 [trackPatch:SurfaceComms] Running Loop=1
2018-09-23T15:25:27.719Z,1537716327.719 [trackPatch:SurfaceComms](DEBUG): Aggregate::initialize trackPatch:SurfaceComms
2018-09-23T15:25:27.720Z,1537716327.720 [trackPatch:SurfaceComms:SurfaceComms] Running Loop=1
2018-09-23T15:25:27.720Z,1537716327.720 [trackPatch:SurfaceComms:SurfaceComms](DEBUG): Aggregate::initialize trackPatch:SurfaceComms:SurfaceComms
2018-09-23T15:25:27.720Z,1537716327.720 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface] Running Loop=1
2018-09-23T15:25:27.720Z,1537716327.720 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T15:25:27.720Z,1537716327.720 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-23T15:25:27.729Z,1537716327.729 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-23T15:25:27.729Z,1537716327.729 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-23T15:25:27.730Z,1537716327.730 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T15:25:27.730Z,1537716327.730 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T15:25:27.743Z,1537716327.743 [trackPatch:SurfaceComms:SurfaceComms:B] Running Loop=1
2018-09-23T15:25:27.743Z,1537716327.743 [trackPatch:SurfaceComms:SurfaceComms:B](DEBUG): Aggregate::initialize trackPatch:SurfaceComms:SurfaceComms:B
2018-09-23T15:25:27.743Z,1537716327.743 [trackPatch:SurfaceComms:SurfaceComms:B:A] Running Loop=1
2018-09-23T15:25:28.119Z,1537716328.119 [trackPatch:SurfaceComms:SurfaceComms:B] Stopped
2018-09-23T15:25:28.119Z,1537716328.119 [trackPatch:SurfaceComms:SurfaceComms:B](DEBUG): Aggregate::uninitialize trackPatch:SurfaceComms:SurfaceComms:B
2018-09-23T15:25:28.119Z,1537716328.119 [trackPatch:SurfaceComms:SurfaceComms:B:A] Stopped
2018-09-23T15:25:28.119Z,1537716328.119 [trackPatch:SurfaceComms:SurfaceComms:C] Running Loop=1
2018-09-23T15:25:28.119Z,1537716328.119 [trackPatch:SurfaceComms:SurfaceComms:C](DEBUG): Aggregate::initialize trackPatch:SurfaceComms:SurfaceComms:C
2018-09-23T15:25:28.119Z,1537716328.119 [trackPatch:SurfaceComms:SurfaceComms:C:A] Running Loop=1
2018-09-23T15:25:28.542Z,1537716328.542 [trackPatch:M.YoYo] Preempted
2018-09-23T15:25:28.542Z,1537716328.542 [trackPatch:L.DepthEnvelope] Preempted
2018-09-23T15:25:28.542Z,1537716328.542 [trackPatch:K.SetSpeed] Preempted
2018-09-23T15:25:28.542Z,1537716328.542 [trackPatch:Science] Preempted
2018-09-23T15:25:28.543Z,1537716328.543 [trackPatch:Science:G] Preempted
2018-09-23T15:25:28.543Z,1537716328.543 [trackPatch:Science:Read_Oil] Preempted
2018-09-23T15:25:28.543Z,1537716328.543 [trackPatch:Science:PeakDetectChl] Preempted
2018-09-23T15:25:28.543Z,1537716328.543 [trackPatch:I.Buoyancy] Preempted
2018-09-23T15:25:28.543Z,1537716328.543 [trackPatch:H.Pitch] Preempted
2018-09-23T15:25:28.543Z,1537716328.543 [trackPatch:G.WaterDepthEnvelope] Preempted
2018-09-23T15:25:28.543Z,1537716328.543 [trackPatch:F.OffshoreEnvelope] Preempted
2018-09-23T15:25:28.544Z,1537716328.544 [trackPatch:SurfaceComms:SurfaceComms:C:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-23T15:25:29.069Z,1537716329.069 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-23T15:25:30.070Z,1537716330.070 [NAL9602](INFO): GPS fix at 20180923T152519: (36.843984, -121.905256)
2018-09-23T15:25:30.184Z,1537716330.184 [trackPatch:SurfaceComms:SurfaceComms:C:A] Stopped
2018-09-23T15:25:30.184Z,1537716330.184 [trackPatch:SurfaceComms:SurfaceComms:C:B] Running Loop=1
2018-09-23T15:25:30.529Z,1537716330.529 [trackPatch:SurfaceComms:SurfaceComms:C:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-23T15:25:30.745Z,1537716330.745 [CommandLine](IMPORTANT): got command set NAL9602.platform_communications 1.000000 bool
2018-09-23T15:25:34.879Z,1537716334.879 [DataOverHttps](INFO): Sending 64 bytes from file Logs/20180923T135420/Courier0058.lzma
2018-09-23T15:25:35.601Z,1537716335.601 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Courier0058.lzma.bak
2018-09-23T15:25:35.601Z,1537716335.601 [DataOverHttps](INFO): SBD MOMSN=8567836
2018-09-23T15:25:44.811Z,1537716344.811 [DataOverHttps](INFO): Sending 241 bytes from file Logs/20180923T135420/Express0059.lzma
2018-09-23T15:25:45.559Z,1537716345.559 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Express0059.lzma.bak
2018-09-23T15:25:45.559Z,1537716345.559 [DataOverHttps](INFO): SBD MOMSN=8567839
2018-09-23T15:25:46.119Z,1537716346.119 [trackPatch:SurfaceComms:SurfaceComms:C:B] Stopped
2018-09-23T15:25:46.120Z,1537716346.120 [trackPatch:SurfaceComms:SurfaceComms:C:C] Running Loop=1
2018-09-23T15:25:46.414Z,1537716346.414 [trackPatch:SurfaceComms:SurfaceComms:C:C](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-23T15:25:50.554Z,1537716350.555 [NAL9602](INFO): GPS fix at 20180923T152540: (36.843991, -121.905281)
2018-09-23T15:25:50.606Z,1537716350.606 [trackPatch:SurfaceComms:SurfaceComms:C:C] Stopped
2018-09-23T15:25:50.606Z,1537716350.606 [trackPatch:SurfaceComms:SurfaceComms:C](INFO): Completed trackPatch:SurfaceComms:SurfaceComms:C
2018-09-23T15:25:50.607Z,1537716350.607 [trackPatch:SurfaceComms:SurfaceComms:C] Stopped
2018-09-23T15:25:50.607Z,1537716350.607 [trackPatch:SurfaceComms:SurfaceComms:C](DEBUG): Aggregate::uninitialize trackPatch:SurfaceComms:SurfaceComms:C
2018-09-23T15:25:50.608Z,1537716350.608 [trackPatch:SurfaceComms:SurfaceComms](INFO): Completed trackPatch:SurfaceComms:SurfaceComms
2018-09-23T15:25:50.608Z,1537716350.608 [trackPatch:SurfaceComms:SurfaceComms] Stopped
2018-09-23T15:25:50.608Z,1537716350.608 [trackPatch:SurfaceComms:SurfaceComms](DEBUG): Aggregate::uninitialize trackPatch:SurfaceComms:SurfaceComms
2018-09-23T15:25:50.608Z,1537716350.608 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface] Stopped
2018-09-23T15:25:50.608Z,1537716350.608 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-23T15:25:50.608Z,1537716350.608 [trackPatch:SurfaceComms](INFO): Completed trackPatch:SurfaceComms
2018-09-23T15:25:50.608Z,1537716350.608 [trackPatch:SurfaceComms] Stopped
2018-09-23T15:25:50.608Z,1537716350.608 [trackPatch:SurfaceComms](DEBUG): Aggregate::uninitialize trackPatch:SurfaceComms
2018-09-23T15:25:51.013Z,1537716351.013 [trackPatch:PatchDetectHorizontal:CrossLeg:B](INFO): Completed trackPatch:PatchDetectHorizontal:CrossLeg:B
2018-09-23T15:25:51.013Z,1537716351.013 [trackPatch:PatchDetectHorizontal:CrossLeg:B] Stopped
2018-09-23T15:25:51.014Z,1537716351.014 [trackPatch:PatchDetectHorizontal:CrossLeg:B](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal:CrossLeg:B
2018-09-23T15:25:51.014Z,1537716351.014 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint] Running Loop=1
2018-09-23T15:25:51.014Z,1537716351.014 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-23T15:25:51.015Z,1537716351.015 [trackPatch:M.YoYo] Running Loop=1
2018-09-23T15:25:51.015Z,1537716351.015 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-23T15:25:51.016Z,1537716351.016 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-23T15:25:51.021Z,1537716351.021 [trackPatch:Science] Running Loop=1
2018-09-23T15:25:51.023Z,1537716351.023 [trackPatch:Science:PeakDetectChl] Running Loop=1
2018-09-23T15:25:51.023Z,1537716351.023 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-23T15:25:51.023Z,1537716351.023 [trackPatch:Science:G] Running Loop=1
2018-09-23T15:25:51.023Z,1537716351.023 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-23T15:25:51.024Z,1537716351.024 [trackPatch:H.Pitch] Running Loop=1
2018-09-23T15:25:51.024Z,1537716351.024 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-23T15:25:51.029Z,1537716351.029 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-23T15:25:51.290Z,1537716351.290 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-23T15:25:51.290Z,1537716351.290 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-23T15:26:02.741Z,1537716362.741 [CommandLine](IMPORTANT): got command show best mass_concentration_of_chlorophyll_in_sea_water
2018-09-23T15:26:02.742Z,1537716362.742 [CommandLine](IMPORTANT): mass_concentration_of_chlorophyll_in_sea_water best is WetLabsSeaOWL_UV_A.mass_concentration_of_chlorophyll_in_sea_water
2018-09-23T15:26:08.063Z,1537716368.063 [CommandLine](IMPORTANT): got command report
2018-09-23T15:26:08.064Z,1537716368.064 [Reporter](INFO): trackPatch:Science.PeakChl reporting changes
2018-09-23T15:26:12.673Z,1537716372.673 [BuoyancyServo](FAULT): Invalid EZ Servo response:""
2018-09-23T15:26:12.673Z,1537716372.673 [BuoyancyServo] Communications Fault, FailCount= 1
2018-09-23T15:26:12.674Z,1537716372.674 [BuoyancyServo](ERROR): Communications Fault
2018-09-23T15:26:12.674Z,1537716372.674 [BuoyancyServo](FAULT): Buoyancy engine reporting null position
2018-09-23T15:26:12.674Z,1537716372.674 [BuoyancyServo] Hardware Fault, FailCount= 1
2018-09-23T15:26:12.674Z,1537716372.674 [BuoyancyServo](ERROR): Hardware Fault
2018-09-23T15:26:12.881Z,1537716372.881 [CBIT](ERROR): Hardware Fault in component: BuoyancyServo
2018-09-23T15:26:13.010Z,1537716373.010 [Radio_Surface](INFO): Powering down
2018-09-23T15:26:13.098Z,1537716373.098 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-23T15:26:13.098Z,1537716373.098 [BuoyancyServo](INFO): Powering down
2018-09-23T15:26:15.133Z,1537716375.133 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-23T15:26:15.133Z,1537716375.133 [BuoyancyServo] No Fault, FailCount= 1
2018-09-23T15:26:15.450Z,1537716375.450 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-23T15:26:15.570Z,1537716375.570 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-23T15:26:22.966Z,1537716382.966 [NAL9602](INFO): Powering down
2018-09-23T15:27:16.556Z,1537716436.556 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T15:28:16.167Z,1537716496.167 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T15:28:50.559Z,1537716530.559 [DataOverHttps](INFO): setting unavailable, lastComms_.elapsed()=180.022614
2018-09-23T15:30:17.227Z,1537716617.227 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T15:31:16.856Z,1537716676.856 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T15:32:16.851Z,1537716736.851 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T15:33:17.261Z,1537716797.261 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T15:34:17.261Z,1537716857.261 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T15:35:17.252Z,1537716917.252 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T15:35:55.691Z,1537716955.691 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-23T15:35:55.691Z,1537716955.691 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-3768,V
2018-09-23T15:36:17.654Z,1537716977.654 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T15:37:17.652Z,1537717037.652 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T15:38:18.055Z,1537717098.055 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T15:39:18.452Z,1537717158.452 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T15:40:18.452Z,1537717218.452 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T15:41:18.852Z,1537717278.852 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T15:42:18.852Z,1537717338.852 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T15:42:32.491Z,1537717352.491 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint] Stopped
2018-09-23T15:42:32.491Z,1537717352.491 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-23T15:42:32.491Z,1537717352.491 [trackPatch:PatchDetectHorizontal:CrossLeg:D] Running Loop=1
2018-09-23T15:42:32.892Z,1537717352.892 [trackPatch:PatchDetectHorizontal:CrossLeg:D](IMPORTANT): CrossPeakWp done. Lat, lon = 36.843947 arcdeg , -121.916012 arcdeg . Patch value is nan ug/l at lat = nan arcdeg , lon = nan arcdeg , dep = nan m , distance = 0.000000 m 
2018-09-23T15:42:32.894Z,1537717352.894 [trackPatch:PatchDetectHorizontal:CrossLeg:D] Stopped
2018-09-23T15:42:32.894Z,1537717352.894 [trackPatch:PatchDetectHorizontal:CrossLeg:AssignPatchDetectOffInCrossLeg] Running Loop=1
2018-09-23T15:42:33.321Z,1537717353.321 [trackPatch:PatchDetectHorizontal:CrossLeg:AssignPatchDetectOffInCrossLeg] Stopped
2018-09-23T15:42:33.325Z,1537717353.325 [trackPatch:PatchDetectHorizontal:CrossLeg:AssignWpDoneInCrossLeg] Running Loop=1
2018-09-23T15:42:33.718Z,1537717353.718 [trackPatch:PatchDetectHorizontal:CrossLeg] Stopped
2018-09-23T15:42:33.718Z,1537717353.718 [trackPatch:PatchDetectHorizontal:CrossLeg](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal:CrossLeg
2018-09-23T15:42:33.718Z,1537717353.718 [trackPatch:PatchDetectHorizontal:CrossLeg:AssignWpDoneInCrossLeg] Stopped
2018-09-23T15:42:33.718Z,1537717353.718 [trackPatch:PatchDetectHorizontal:AssignWpBearingForInLeg] Running Loop=1
2018-09-23T15:42:34.101Z,1537717354.101 [trackPatch:PatchDetectHorizontal:AssignWpBearingForInLeg] Stopped
2018-09-23T15:42:34.101Z,1537717354.101 [trackPatch:PatchDetectHorizontal:F] Running Loop=1
2018-09-23T15:42:34.531Z,1537717354.531 [trackPatch:PatchDetectHorizontal:F](IMPORTANT): Next: bearing for InLeg: 90.000000 arcdeg . Current lat, lon = 36.843947 arcdeg , -121.916029 arcdeg . Patch value is nan ug/l at lat = nan arcdeg , lon = nan arcdeg , dep = nan m , distance = 0.000000 m 
2018-09-23T15:42:34.532Z,1537717354.532 [trackPatch:PatchDetectHorizontal:F] Stopped
2018-09-23T15:42:34.537Z,1537717354.537 [trackPatch:PatchDetectHorizontal:InLegWp.Waypoint] Running Loop=1
2018-09-23T15:42:34.537Z,1537717354.537 [trackPatch:PatchDetectHorizontal:InLegWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-23T15:42:34.915Z,1537717354.915 [trackPatch:PatchDetectHorizontal:InLegWp.Waypoint] Stopped
2018-09-23T15:42:34.915Z,1537717354.915 [trackPatch:PatchDetectHorizontal:InLegWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-23T15:42:34.915Z,1537717354.915 [trackPatch:PatchDetectHorizontal:AssignWpBearingForOutLeg] Running Loop=1
2018-09-23T15:42:35.339Z,1537717355.339 [trackPatch:PatchDetectHorizontal:AssignWpBearingForOutLeg] Stopped
2018-09-23T15:42:35.339Z,1537717355.339 [trackPatch:PatchDetectHorizontal:I] Running Loop=1
2018-09-23T15:42:35.728Z,1537717355.728 [trackPatch:PatchDetectHorizontal:I](IMPORTANT): Next: bearing for OutLeg: 0.000000 arcdeg . WpMaxDistance = 1000.000000 m . Current lat, lon = 36.843947 arcdeg , -121.916042 arcdeg . Patch value is nan ug/l at lat = nan arcdeg , lon = nan arcdeg , dep = nan m , distance = 0.000000 m 
2018-09-23T15:42:35.733Z,1537717355.733 [trackPatch:PatchDetectHorizontal:I] Stopped
2018-09-23T15:42:35.734Z,1537717355.734 [trackPatch:PatchDetectHorizontal:J] Running Loop=1
2018-09-23T15:42:35.734Z,1537717355.734 [trackPatch:PatchDetectHorizontal:J](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal:J
2018-09-23T15:42:36.128Z,1537717356.128 [trackPatch:SurfaceCommsSplit] Running Loop=1
2018-09-23T15:42:36.128Z,1537717356.128 [trackPatch:SurfaceCommsSplit](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit
2018-09-23T15:42:36.128Z,1537717356.128 [trackPatch:SurfaceCommsSplit:A.GoToSurface] Running Loop=1
2018-09-23T15:42:36.128Z,1537717356.128 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T15:42:36.129Z,1537717356.129 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-23T15:42:36.129Z,1537717356.129 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-23T15:42:36.130Z,1537717356.130 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-23T15:42:36.130Z,1537717356.130 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T15:42:36.131Z,1537717356.131 [trackPatch:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T15:42:47.069Z,1537717367.069 [trackPatch:SurfaceCommsSplit:B] Running Loop=1
2018-09-23T15:42:47.070Z,1537717367.070 [trackPatch:SurfaceCommsSplit:B](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit:B
2018-09-23T15:42:47.070Z,1537717367.070 [trackPatch:SurfaceCommsSplit:B:A] Running Loop=1
2018-09-23T15:42:47.402Z,1537717367.402 [Radio_Surface](INFO): Powering up
2018-09-23T15:42:47.450Z,1537717367.450 [trackPatch:SurfaceCommsSplit:B:A](INFO): ##UnpackSplit##
2018-09-23T15:42:47.451Z,1537717367.451 [trackPatch:SurfaceCommsSplit:B:A] Stopped
2018-09-23T15:42:47.451Z,1537717367.451 [trackPatch:SurfaceCommsSplit:B](INFO): Completed trackPatch:SurfaceCommsSplit:B
2018-09-23T15:42:47.451Z,1537717367.451 [trackPatch:SurfaceCommsSplit:B] Stopped
2018-09-23T15:42:47.451Z,1537717367.451 [trackPatch:SurfaceCommsSplit:B](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit:B
2018-09-23T15:42:47.451Z,1537717367.451 [trackPatch:SurfaceCommsSplit:C] Running Loop=1
2018-09-23T15:42:47.451Z,1537717367.451 [trackPatch:SurfaceCommsSplit:C](DEBUG): Aggregate::initialize trackPatch:SurfaceCommsSplit:C
2018-09-23T15:42:47.451Z,1537717367.451 [trackPatch:SurfaceCommsSplit:C:A] Running Loop=1
2018-09-23T15:42:47.824Z,1537717367.824 [trackPatch:M.YoYo] Preempted
2018-09-23T15:42:47.824Z,1537717367.824 [trackPatch:L.DepthEnvelope] Preempted
2018-09-23T15:42:47.824Z,1537717367.824 [trackPatch:K.SetSpeed] Preempted
2018-09-23T15:42:47.824Z,1537717367.824 [trackPatch:Science] Preempted
2018-09-23T15:42:47.824Z,1537717367.824 [trackPatch:Science:G] Preempted
2018-09-23T15:42:47.824Z,1537717367.824 [trackPatch:Science:Read_Oil] Preempted
2018-09-23T15:42:47.824Z,1537717367.824 [trackPatch:Science:PeakDetectChl] Preempted
2018-09-23T15:42:47.824Z,1537717367.824 [trackPatch:I.Buoyancy] Preempted
2018-09-23T15:42:47.825Z,1537717367.825 [trackPatch:H.Pitch] Preempted
2018-09-23T15:42:47.826Z,1537717367.826 [trackPatch:G.WaterDepthEnvelope] Preempted
2018-09-23T15:42:47.826Z,1537717367.826 [trackPatch:F.OffshoreEnvelope] Preempted
2018-09-23T15:42:48.061Z,1537717368.061 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-23T15:42:48.168Z,1537717368.168 [NAL9602](INFO): Powering up
2018-09-23T15:42:57.425Z,1537717377.425 [BuoyancyServo](ERROR): getPosition uart error serial timeout
2018-09-23T15:42:57.425Z,1537717377.425 [BuoyancyServo](FAULT): Buoyancy getPosition uart error.serial timeout
2018-09-23T15:42:57.425Z,1537717377.425 [BuoyancyServo] Communications Fault, FailCount= 2
2018-09-23T15:42:57.425Z,1537717377.425 [BuoyancyServo](ERROR): Communications Fault
2018-09-23T15:42:57.431Z,1537717377.431 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-09-23T15:42:57.559Z,1537717377.559 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-23T15:42:57.560Z,1537717377.560 [BuoyancyServo](INFO): Powering down
2018-09-23T15:42:59.078Z,1537717379.078 [NAL9602](INFO): NAL9602 initialized
2018-09-23T15:42:59.167Z,1537717379.167 [BuoyancyServo](FAULT): LCB fault:  Current Limiter Activated.
2018-09-23T15:42:59.167Z,1537717379.167 [BuoyancyServo] Hardware Fault, FailCount= 2
2018-09-23T15:42:59.167Z,1537717379.167 [BuoyancyServo](ERROR): Hardware Fault
2018-09-23T15:42:59.532Z,1537717379.532 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-23T15:42:59.532Z,1537717379.532 [BuoyancyServo] No Fault, FailCount= 2
2018-09-23T15:42:59.977Z,1537717379.977 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-23T15:43:00.100Z,1537717380.100 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-23T15:43:13.512Z,1537717393.512 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-23T15:43:13.512Z,1537717393.512 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092308484832,35.0, -0.1,   0.0  0
2018-09-23T15:43:19.068Z,1537717399.068 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T15:43:45.072Z,1537717425.072 [NAL9602](INFO): SBD MO Status=2, MOMSN=1296, MT Status=2, MTMSN=0
2018-09-23T15:43:45.072Z,1537717425.072 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-23T15:44:13.475Z,1537717453.475 [NAL9602](INFO): SBD MO Status=0, MOMSN=1296, MT Status=0, MTMSN=0
2018-09-23T15:44:13.475Z,1537717453.475 [NAL9602](INFO): No messages in MT queue
2018-09-23T15:44:14.674Z,1537717454.674 [NAL9602](INFO): GPS fix at 20180923T154404: (36.844390, -121.915926)
2018-09-23T15:44:14.749Z,1537717454.749 [UniversalFixResidualReporter](INFO): Fix residual: 5.4 %DT, over the last 970.4 m. Residual distance 52.8 m at bearing -155.7 degrees. Fix at (36.8444, -121.9159) with 948.3 m made good.
2018-09-23T15:44:14.751Z,1537717454.751 [trackPatch:SurfaceCommsSplit:C:A] Stopped
2018-09-23T15:44:14.751Z,1537717454.751 [trackPatch:SurfaceCommsSplit:C:B] Running Loop=1
2018-09-23T15:44:20.884Z,1537717460.884 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T15:44:43.264Z,1537717483.264 [NAL9602](INFO): SBD MO Status=1, MOMSN=1297, MT Status=0, MTMSN=0
2018-09-23T15:44:43.313Z,1537717483.313 [NAL9602](INFO): Sent 73 bytes from file Logs/20180923T135420/Courier0061.lzma
2018-09-23T15:44:43.313Z,1537717483.313 [NAL9602](INFO): Packets left to send: 0
2018-09-23T15:44:43.315Z,1537717483.315 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180923T135420/Courier0061.lzma.parts/0000.sbd
2018-09-23T15:44:43.315Z,1537717483.315 [NAL9602](DEBUG): Completed sending Logs/20180923T135420/Courier0061.lzma
2018-09-23T15:45:00.629Z,1537717500.629 [NAL9602](INFO): SBD MO Status=2, MOMSN=1298, MT Status=2, MTMSN=0
2018-09-23T15:45:00.630Z,1537717500.630 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-23T15:45:19.580Z,1537717519.580 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T15:45:29.584Z,1537717529.584 [NAL9602](INFO): SBD MO Status=2, MOMSN=1298, MT Status=2, MTMSN=0
2018-09-23T15:45:29.584Z,1537717529.584 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-23T15:46:00.168Z,1537717560.168 [NAL9602](INFO): SBD MO Status=1, MOMSN=1298, MT Status=0, MTMSN=0
2018-09-23T15:46:00.217Z,1537717560.217 [NAL9602](INFO): Sent 332 bytes from file Logs/20180923T135420/Express0062.lzma
2018-09-23T15:46:00.217Z,1537717560.217 [NAL9602](INFO): Packets left to send: 4
2018-09-23T15:46:00.219Z,1537717560.219 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180923T135420/Express0062.lzma.parts/0004.sbd
2018-09-23T15:46:14.839Z,1537717574.839 [NAL9602](INFO): SBD MO Status=1, MOMSN=1299, MT Status=0, MTMSN=0
2018-09-23T15:46:14.889Z,1537717574.889 [NAL9602](INFO): Sent 332 bytes from file Logs/20180923T135420/Express0062.lzma
2018-09-23T15:46:14.890Z,1537717574.890 [NAL9602](INFO): Packets left to send: 3
2018-09-23T15:46:14.891Z,1537717574.891 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180923T135420/Express0062.lzma.parts/0003.sbd
2018-09-23T15:46:15.620Z,1537717575.620 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.002658
2018-09-23T15:46:21.664Z,1537717581.664 [DataOverHttps](INFO): Sending 1583 bytes from file Logs/20180923T135420/Express0062.lzma
2018-09-23T15:46:22.408Z,1537717582.408 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Express0062.lzma.bak
2018-09-23T15:46:22.408Z,1537717582.408 [DataOverHttps](INFO): SBD MOMSN=8567925
2018-09-23T15:46:22.930Z,1537717582.930 [trackPatch:SurfaceCommsSplit:C:B] Stopped
2018-09-23T15:46:22.930Z,1537717582.930 [trackPatch:SurfaceCommsSplit:C:C] Running Loop=1
2018-09-23T15:46:26.515Z,1537717586.515 [NAL9602](INFO): SBD MO Status=1, MOMSN=1300, MT Status=0, MTMSN=0
2018-09-23T15:46:26.565Z,1537717586.565 [NAL9602](INFO): Sent 332 bytes from file Logs/20180923T135420/Express0062.lzma
2018-09-23T15:46:26.565Z,1537717586.565 [NAL9602](INFO): Packets left to send: 2
2018-09-23T15:46:26.567Z,1537717586.567 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180923T135420/Express0062.lzma.parts/0002.sbd
2018-09-23T15:46:27.547Z,1537717587.547 [NAL9602](INFO): GPS fix at 20180923T154618: (36.844522, -121.916109)
2018-09-23T15:46:27.620Z,1537717587.620 [trackPatch:SurfaceCommsSplit:C:C] Stopped
2018-09-23T15:46:27.620Z,1537717587.620 [trackPatch:SurfaceCommsSplit:C](INFO): Completed trackPatch:SurfaceCommsSplit:C
2018-09-23T15:46:27.620Z,1537717587.620 [trackPatch:SurfaceCommsSplit:C] Stopped
2018-09-23T15:46:27.621Z,1537717587.621 [trackPatch:SurfaceCommsSplit:C](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit:C
2018-09-23T15:46:27.622Z,1537717587.622 [trackPatch:SurfaceCommsSplit](INFO): Completed trackPatch:SurfaceCommsSplit
2018-09-23T15:46:27.622Z,1537717587.622 [trackPatch:SurfaceCommsSplit] Stopped
2018-09-23T15:46:27.623Z,1537717587.623 [trackPatch:SurfaceCommsSplit](DEBUG): Aggregate::uninitialize trackPatch:SurfaceCommsSplit
2018-09-23T15:46:27.623Z,1537717587.623 [trackPatch:SurfaceCommsSplit:A.GoToSurface] Stopped
2018-09-23T15:46:27.623Z,1537717587.623 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-23T15:46:28.044Z,1537717588.044 [trackPatch:PatchDetectHorizontal:J](INFO): Completed trackPatch:PatchDetectHorizontal:J
2018-09-23T15:46:28.044Z,1537717588.044 [trackPatch:PatchDetectHorizontal:J] Stopped
2018-09-23T15:46:28.044Z,1537717588.044 [trackPatch:PatchDetectHorizontal:J](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal:J
2018-09-23T15:46:28.046Z,1537717588.046 [trackPatch:PatchDetectHorizontal:AssignPatchDetectOnForOutLeg] Running Loop=1
2018-09-23T15:46:28.046Z,1537717588.046 [trackPatch:M.YoYo] Running Loop=1
2018-09-23T15:46:28.047Z,1537717588.047 [trackPatch:L.DepthEnvelope] Running Loop=1
2018-09-23T15:46:28.048Z,1537717588.048 [trackPatch:K.SetSpeed] Running Loop=1
2018-09-23T15:46:28.048Z,1537717588.048 [trackPatch:Science] Running Loop=1
2018-09-23T15:46:28.058Z,1537717588.058 [trackPatch:Science:PeakDetectChl] Running Loop=1
2018-09-23T15:46:28.058Z,1537717588.058 [trackPatch:Science:Read_Oil] Running Loop=1
2018-09-23T15:46:28.058Z,1537717588.058 [trackPatch:Science:G] Running Loop=1
2018-09-23T15:46:28.059Z,1537717588.059 [trackPatch:I.Buoyancy] Running Loop=1
2018-09-23T15:46:28.059Z,1537717588.059 [trackPatch:H.Pitch] Running Loop=1
2018-09-23T15:46:28.060Z,1537717588.060 [trackPatch:G.WaterDepthEnvelope] Running Loop=1
2018-09-23T15:46:28.060Z,1537717588.060 [trackPatch:F.OffshoreEnvelope] Running Loop=1
2018-09-23T15:46:28.287Z,1537717588.287 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-23T15:46:28.287Z,1537717588.287 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-23T15:46:28.402Z,1537717588.402 [trackPatch:PatchDetectHorizontal:AssignPatchDetectOnForOutLeg] Stopped
2018-09-23T15:46:28.403Z,1537717588.403 [trackPatch:PatchDetectHorizontal:OutLeg] Running Loop=1
2018-09-23T15:46:28.403Z,1537717588.403 [trackPatch:PatchDetectHorizontal:OutLeg](DEBUG): Aggregate::initialize trackPatch:PatchDetectHorizontal:OutLeg
2018-09-23T15:46:28.403Z,1537717588.403 [trackPatch:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint] Running Loop=1
2018-09-23T15:46:28.403Z,1537717588.403 [trackPatch:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-23T15:47:00.338Z,1537717620.338 [NAL9602](INFO): Powering down
2018-09-23T15:47:05.378Z,1537717625.378 [Radio_Surface](INFO): Powering down
2018-09-23T15:47:53.142Z,1537717673.142 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T15:48:53.544Z,1537717733.544 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T15:49:27.957Z,1537717767.957 [DataOverHttps](INFO): setting unavailable, lastComms_.elapsed()=180.420395
2018-09-23T15:50:53.192Z,1537717853.192 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T15:51:53.196Z,1537717913.196 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T15:52:53.608Z,1537717973.608 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T15:53:05.669Z,1537717985.669 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-23T15:53:05.669Z,1537717985.669 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092308584032,35.0, -0.1,   0.0,10
2018-09-23T15:53:10.118Z,1537717990.118 [trackPatch](INFO): Timed out from 2018-09-23T15:23:09.7Z
2018-09-23T15:53:10.118Z,1537717990.118 [MissionManager](INFO): trackPatch is completed.
2018-09-23T15:53:10.118Z,1537717990.118 [MissionManager](INFO): Uninitializing Mission trackPatch
2018-09-23T15:53:10.118Z,1537717990.118 [trackPatch] Stopped
2018-09-23T15:53:10.119Z,1537717990.119 [trackPatch](DEBUG): Aggregate::uninitialize trackPatch
2018-09-23T15:53:10.119Z,1537717990.119 [trackPatch:A.AltitudeEnvelope] Stopped
2018-09-23T15:53:10.119Z,1537717990.119 [trackPatch:A.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-23T15:53:10.119Z,1537717990.119 [trackPatch:B.DepthEnvelope] Stopped
2018-09-23T15:53:10.119Z,1537717990.119 [trackPatch:B.DepthEnvelope](DEBUG): Uninitialize.
2018-09-23T15:53:10.119Z,1537717990.119 [trackPatch:F.OffshoreEnvelope] Stopped
2018-09-23T15:53:10.119Z,1537717990.119 [trackPatch:F.OffshoreEnvelope](DEBUG): Uninitialize OffshoreEnvelopeComponent.
2018-09-23T15:53:10.119Z,1537717990.119 [trackPatch:G.WaterDepthEnvelope] Stopped
2018-09-23T15:53:10.119Z,1537717990.119 [trackPatch:G.WaterDepthEnvelope](DEBUG): Uninitialize WaterDepthEnvelopeComponent.
2018-09-23T15:53:10.119Z,1537717990.119 [trackPatch:H.Pitch] Stopped
2018-09-23T15:53:10.119Z,1537717990.119 [trackPatch:I.Buoyancy] Stopped
2018-09-23T15:53:10.119Z,1537717990.119 [trackPatch:I.Buoyancy](DEBUG): Uninitialize Buoyancy Component.
2018-09-23T15:53:10.120Z,1537717990.120 [trackPatch:Science] Stopped
2018-09-23T15:53:10.120Z,1537717990.120 [trackPatch:Science](DEBUG): Aggregate::uninitialize trackPatch:Science
2018-09-23T15:53:10.120Z,1537717990.120 [trackPatch:Science:G] Stopped
2018-09-23T15:53:10.120Z,1537717990.120 [trackPatch:Science:Read_Oil] Stopped
2018-09-23T15:53:10.120Z,1537717990.120 [trackPatch:Science:PeakDetectChl] Stopped
2018-09-23T15:53:10.120Z,1537717990.120 [trackPatch:Science:PeakDetectChl](DEBUG): Aggregate::uninitialize trackPatch:Science:PeakDetectChl
2018-09-23T15:53:10.120Z,1537717990.120 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2018-09-23T15:53:10.120Z,1537717990.120 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-23T15:53:10.120Z,1537717990.120 [trackPatch:K.SetSpeed] Stopped
2018-09-23T15:53:10.120Z,1537717990.120 [trackPatch:K.SetSpeed](DEBUG): Uninitialize.
2018-09-23T15:53:10.120Z,1537717990.120 [trackPatch:L.DepthEnvelope] Stopped
2018-09-23T15:53:10.121Z,1537717990.121 [trackPatch:L.DepthEnvelope](DEBUG): Uninitialize.
2018-09-23T15:53:10.125Z,1537717990.125 [trackPatch:M.YoYo] Stopped
2018-09-23T15:53:10.125Z,1537717990.125 [trackPatch:M.YoYo](DEBUG): Uninitialize YoYoComponent.
2018-09-23T15:53:10.125Z,1537717990.125 [trackPatch:PatchDetectHorizontal] Stopped
2018-09-23T15:53:10.125Z,1537717990.125 [trackPatch:PatchDetectHorizontal](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal
2018-09-23T15:53:10.125Z,1537717990.125 [trackPatch:PatchDetectHorizontal:PatchDetection] Stopped
2018-09-23T15:53:10.125Z,1537717990.125 [trackPatch:PatchDetectHorizontal:PatchDetection](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal:PatchDetection
2018-09-23T15:53:10.126Z,1537717990.126 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal] Stopped
2018-09-23T15:53:10.126Z,1537717990.126 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-23T15:53:10.126Z,1537717990.126 [trackPatch:PatchDetectHorizontal:OutLeg] Stopped
2018-09-23T15:53:10.126Z,1537717990.126 [trackPatch:PatchDetectHorizontal:OutLeg](DEBUG): Aggregate::uninitialize trackPatch:PatchDetectHorizontal:OutLeg
2018-09-23T15:53:10.126Z,1537717990.126 [trackPatch:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint] Stopped
2018-09-23T15:53:10.126Z,1537717990.126 [trackPatch:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-23T15:53:10.225Z,1537717990.225 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-23T15:53:10.470Z,1537717990.470 [Reporter](INFO): trackPatch:Science.PeakChl no_value
2018-09-23T15:53:10.536Z,1537717990.536 [MissionManager](IMPORTANT): Started mission Default
2018-09-23T15:53:10.541Z,1537717990.541 [Default] Running Loop=1
2018-09-23T15:53:10.542Z,1537717990.542 [Default](DEBUG): Aggregate::initialize Default
2018-09-23T15:53:10.542Z,1537717990.542 [Default:B.GoToSurface] Running Loop=1
2018-09-23T15:53:10.542Z,1537717990.542 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-23T15:53:10.544Z,1537717990.544 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-23T15:53:10.548Z,1537717990.548 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-23T15:53:10.548Z,1537717990.548 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-23T15:53:10.553Z,1537717990.553 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-23T15:53:10.554Z,1537717990.554 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-23T15:53:10.554Z,1537717990.554 [Default:A.Wait] Running Loop=1
2018-09-23T15:53:10.554Z,1537717990.554 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-23T15:53:10.947Z,1537717990.947 [ElevatorOffsetCalculator](INFO): New estimator for commanded vars: speed 1.00 m/s, pitch 30.00 deg, mass-position -22.00 mm (3 active estimators).
2018-09-23T15:53:23.866Z,1537718003.866 [Default:A.Wait](INFO): Done Waiting.
2018-09-23T15:53:23.866Z,1537718003.866 [Default:A.Wait] Stopped
2018-09-23T15:53:23.866Z,1537718003.866 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-23T15:53:46.269Z,1537718026.269 [Default:CheckIn] Running Loop=1
2018-09-23T15:53:46.270Z,1537718026.270 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-23T15:53:46.270Z,1537718026.270 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-23T15:53:46.338Z,1537718026.338 [Radio_Surface](INFO): Powering up
2018-09-23T15:53:47.014Z,1537718027.014 [NAL9602](INFO): Powering up
2018-09-23T15:53:53.547Z,1537718033.547 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T15:53:57.958Z,1537718037.958 [NAL9602](INFO): NAL9602 initialized
2018-09-23T15:54:53.944Z,1537718093.944 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T15:55:16.356Z,1537718116.356 [NAL9602](INFO): SBD MO Status=2, MOMSN=1301, MT Status=2, MTMSN=0
2018-09-23T15:55:16.356Z,1537718116.356 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-23T15:55:31.556Z,1537718131.556 [NAL9602](INFO): SBD MO Status=2, MOMSN=1301, MT Status=2, MTMSN=0
2018-09-23T15:55:31.556Z,1537718131.556 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-23T15:55:46.348Z,1537718146.348 [NAL9602](INFO): SBD MO Status=0, MOMSN=1301, MT Status=0, MTMSN=0
2018-09-23T15:55:46.348Z,1537718146.348 [NAL9602](INFO): No messages in MT queue
2018-09-23T15:55:47.562Z,1537718147.562 [NAL9602](INFO): GPS fix at 20180923T155537: (36.848172, -121.915991)
2018-09-23T15:55:47.606Z,1537718147.606 [Default:CheckIn:Read_GPS] Stopped
2018-09-23T15:55:47.606Z,1537718147.606 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-23T15:55:54.344Z,1537718154.344 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T15:56:24.480Z,1537718184.480 [NAL9602](INFO): SBD MO Status=2, MOMSN=1302, MT Status=2, MTMSN=0
2018-09-23T15:56:24.480Z,1537718184.480 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-23T15:56:34.604Z,1537718194.604 [NAL9602](INFO): SBD MO Status=1, MOMSN=1302, MT Status=0, MTMSN=0
2018-09-23T15:56:34.657Z,1537718194.657 [NAL9602](INFO): Sent 65 bytes from file Logs/20180923T135420/Courier0064.lzma
2018-09-23T15:56:34.657Z,1537718194.657 [NAL9602](INFO): Packets left to send: 0
2018-09-23T15:56:34.659Z,1537718194.659 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180923T135420/Courier0064.lzma.parts/0000.sbd
2018-09-23T15:56:34.659Z,1537718194.659 [NAL9602](DEBUG): Completed sending Logs/20180923T135420/Courier0064.lzma
2018-09-23T15:56:44.348Z,1537718204.348 [NAL9602](INFO): SBD MO Status=1, MOMSN=1303, MT Status=0, MTMSN=0
2018-09-23T15:56:44.401Z,1537718204.401 [NAL9602](INFO): Sent 332 bytes from file Logs/20180923T135420/Express0065.lzma
2018-09-23T15:56:44.401Z,1537718204.401 [NAL9602](INFO): Packets left to send: 1
2018-09-23T15:56:44.403Z,1537718204.403 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180923T135420/Express0065.lzma.parts/0001.sbd
2018-09-23T15:56:54.084Z,1537718214.084 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T15:57:03.702Z,1537718223.702 [NAL9602](INFO): SBD MO Status=1, MOMSN=1304, MT Status=0, MTMSN=0
2018-09-23T15:57:03.753Z,1537718223.753 [NAL9602](INFO): Sent 206 bytes from file Logs/20180923T135420/Express0065.lzma
2018-09-23T15:57:03.753Z,1537718223.753 [NAL9602](INFO): Packets left to send: 0
2018-09-23T15:57:03.755Z,1537718223.755 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180923T135420/Express0065.lzma.parts/0000.sbd
2018-09-23T15:57:03.755Z,1537718223.755 [NAL9602](DEBUG): Completed sending Logs/20180923T135420/Express0065.lzma
2018-09-23T15:57:17.317Z,1537718237.317 [RDI_Pathfinder](ERROR): Failed to parse:
68,-32768,-32768,-32768,V
2018-09-23T15:57:18.492Z,1537718238.492 [NAL9602](INFO): SBD MO Status=0, MOMSN=1305, MT Status=0, MTMSN=0
2018-09-23T15:57:18.596Z,1537718238.596 [Default:CheckIn:Read_Iridium] Stopped
2018-09-23T15:57:18.597Z,1537718238.597 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-23T15:57:18.597Z,1537718238.597 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-23T15:57:49.290Z,1537718269.290 [NAL9602](INFO): Powering down
2018-09-23T15:57:54.084Z,1537718274.084 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T15:58:54.484Z,1537718334.484 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T15:59:54.484Z,1537718394.484 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-23T16:00:29.026Z,1537718429.026 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.002788
2018-09-23T16:02:19.198Z,1537718539.198 [Default:CheckIn:C.Wait](INFO): Done Waiting.
2018-09-23T16:02:19.199Z,1537718539.199 [Default:CheckIn:C.Wait] Stopped
2018-09-23T16:02:19.199Z,1537718539.199 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-23T16:02:19.199Z,1537718539.199 [Default:CheckIn:D] Running Loop=1
2018-09-23T16:02:19.602Z,1537718539.602 [Default:CheckIn:D] Stopped
2018-09-23T16:02:19.602Z,1537718539.602 [Default:CheckIn:E] Running Loop=1
2018-09-23T16:02:20.018Z,1537718540.018 [Default:CheckIn:E](IMPORTANT): Default mission has been running for 9.151082 min 
2018-09-23T16:02:20.018Z,1537718540.018 [Default:CheckIn:E] Stopped
2018-09-23T16:02:20.019Z,1537718540.019 [Default:CheckIn](INFO): Completed Default:CheckIn
2018-09-23T16:02:20.019Z,1537718540.019 [Default:CheckIn] Stopped
2018-09-23T16:02:20.019Z,1537718540.019 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-23T16:02:20.019Z,1537718540.019 [Default:CheckIn](INFO): Running loop #2
2018-09-23T16:02:20.019Z,1537718540.019 [Default:CheckIn] Running Loop=2
2018-09-23T16:02:20.019Z,1537718540.019 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-23T16:02:20.019Z,1537718540.019 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-23T16:02:20.750Z,1537718540.750 [NAL9602](INFO): Powering up
2018-09-23T16:02:27.322Z,1537718547.322 [CommandLine](IMPORTANT): got command get 
2018-09-23T16:02:27.322Z,1537718547.322 [CommandLine](FAULT): Incomplete syntax. Try: help get
2018-09-23T16:02:29.345Z,1537718549.345 [CommandLine](IMPORTANT): got command show stack
2018-09-23T16:02:29.346Z,1537718549.346 [CommandLine](IMPORTANT): Behavior Stack:

2018-09-23T16:02:29.346Z,1537718549.346 [Default](IMPORTANT): Priority 0: Default:B.GoToSurface
2018-09-23T16:02:29.346Z,1537718549.346 [Default:CheckIn](IMPORTANT): Priority 1: Default:CheckIn:Read_GPS
2018-09-23T16:02:31.802Z,1537718551.802 [NAL9602](INFO): NAL9602 initialized
2018-09-23T16:02:51.804Z,1537718571.804 [NAL9602](INFO): SBD MO Status=2, MOMSN=1306, MT Status=2, MTMSN=0
2018-09-23T16:02:51.804Z,1537718571.804 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-23T16:03:01.404Z,1537718581.404 [NAL9602](INFO): SBD MO Status=0, MOMSN=1306, MT Status=0, MTMSN=0
2018-09-23T16:03:01.404Z,1537718581.404 [NAL9602](INFO): No messages in MT queue
2018-09-23T16:03:05.822Z,1537718585.822 [NAL9602](INFO): GPS fix at 20180923T160255: (36.848425, -121.916346)
2018-09-23T16:03:05.873Z,1537718585.873 [Default:CheckIn:Read_GPS] Stopped
2018-09-23T16:03:05.874Z,1537718585.874 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-23T16:03:10.444Z,1537718590.444 [DataOverHttps](INFO): Sending 64 bytes from file Logs/20180923T135420/Courier0067.lzma
2018-09-23T16:03:11.231Z,1537718591.231 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Courier0067.lzma.bak
2018-09-23T16:03:11.231Z,1537718591.231 [DataOverHttps](INFO): SBD MOMSN=8567984
2018-09-23T16:03:14.450Z,1537718594.450 [CommandLine](IMPORTANT): got command report
2018-09-23T16:03:14.450Z,1537718594.450 [Reporter](INFO): trackPatch:Science.PeakChl reporting changes
2018-09-23T16:03:20.540Z,1537718600.540 [DataOverHttps](INFO): Sending 303 bytes from file Logs/20180923T135420/Express0068.lzma
2018-09-23T16:03:21.293Z,1537718601.293 [DataOverHttps](INFO): Moved sent file to Logs/20180923T135420/Express0068.lzma.bak
2018-09-23T16:03:21.294Z,1537718601.294 [DataOverHttps](INFO): SBD MOMSN=8567987
2018-09-23T16:03:21.826Z,1537718601.826 [Default:CheckIn:Read_Iridium] Stopped
2018-09-23T16:03:21.826Z,1537718601.826 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-23T16:03:21.826Z,1537718601.826 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-23T16:03:40.774Z,1537718620.774 [NAL9602](INFO): Powering down
2018-09-23T16:04:26.489Z,1537718666.489 [DataOverHttps](IMPORTANT): SBD MTMSN=20180923T160416
2018-09-23T16:04:31.066Z,1537718671.066 [DataOverHttps](INFO): Received command:restart logs