2018-09-24T17:40:57.284Z,1537810857.284 [CommandLine](IMPORTANT): got command restart logs
2018-09-24T17:40:58.311Z,1537810858.311 [NAL9602](INFO): GPS fix at 20180924T174049: (36.847213, -121.927566)
2018-09-24T17:40:58.348Z,1537810858.348 [Default:CheckIn:Read_GPS] Stopped
2018-09-24T17:40:58.353Z,1537810858.353 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-24T17:41:17.764Z,1537810877.764 [NAL9602](INFO): SBD MO Status=2, MOMSN=1552, MT Status=2, MTMSN=0
2018-09-24T17:41:17.764Z,1537810877.764 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-24T17:41:37.927Z,1537810897.927 [NAL9602](INFO): SBD MO Status=1, MOMSN=1552, MT Status=0, MTMSN=0
2018-09-24T17:41:37.986Z,1537810897.986 [NAL9602](INFO): Sent 25 bytes from file Logs/20180924T165907/Courier0022.lzma
2018-09-24T17:41:37.987Z,1537810897.987 [NAL9602](INFO): Packets left to send: 0
2018-09-24T17:41:37.988Z,1537810897.988 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T165907/Courier0022.lzma.parts/0000.sbd
2018-09-24T17:41:37.988Z,1537810897.988 [NAL9602](DEBUG): Completed sending Logs/20180924T165907/Courier0022.lzma
2018-09-24T17:41:49.684Z,1537810909.684 [NAL9602](INFO): SBD MO Status=1, MOMSN=1553, MT Status=0, MTMSN=0
2018-09-24T17:41:49.733Z,1537810909.733 [NAL9602](INFO): Sent 25 bytes from file Logs/20180924T174057/Courier0000.lzma
2018-09-24T17:41:49.733Z,1537810909.733 [NAL9602](INFO): Packets left to send: 0
2018-09-24T17:41:49.735Z,1537810909.735 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T174057/Courier0000.lzma.parts/0000.sbd
2018-09-24T17:41:49.735Z,1537810909.735 [NAL9602](DEBUG): Completed sending Logs/20180924T174057/Courier0000.lzma
2018-09-24T17:41:55.411Z,1537810915.411 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T17:42:06.212Z,1537810926.212 [NAL9602](INFO): SBD MO Status=2, MOMSN=1554, MT Status=2, MTMSN=0
2018-09-24T17:42:06.212Z,1537810926.212 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-24T17:42:25.576Z,1537810945.576 [NAL9602](INFO): SBD MO Status=1, MOMSN=1554, MT Status=0, MTMSN=0
2018-09-24T17:42:25.633Z,1537810945.633 [NAL9602](INFO): Sent 198 bytes from file Logs/20180924T165907/Express0023.lzma
2018-09-24T17:42:25.633Z,1537810945.633 [NAL9602](INFO): Packets left to send: 0
2018-09-24T17:42:25.636Z,1537810945.636 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T165907/Express0023.lzma.parts/0000.sbd
2018-09-24T17:42:25.636Z,1537810945.636 [NAL9602](DEBUG): Completed sending Logs/20180924T165907/Express0023.lzma
2018-09-24T17:42:42.940Z,1537810962.940 [NAL9602](INFO): SBD MO Status=1, MOMSN=1555, MT Status=0, MTMSN=0
2018-09-24T17:42:42.997Z,1537810962.997 [NAL9602](INFO): Sent 25 bytes from file Logs/20180924T174057/Express0001.lzma
2018-09-24T17:42:42.997Z,1537810962.997 [NAL9602](INFO): Packets left to send: 0
2018-09-24T17:42:42.999Z,1537810962.999 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T174057/Express0001.lzma.parts/0000.sbd
2018-09-24T17:42:42.999Z,1537810962.999 [NAL9602](DEBUG): Completed sending Logs/20180924T174057/Express0001.lzma
2018-09-24T17:42:55.331Z,1537810975.331 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T17:42:59.336Z,1537810979.336 [NAL9602](INFO): SBD MO Status=2, MOMSN=1556, MT Status=2, MTMSN=0
2018-09-24T17:42:59.336Z,1537810979.336 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-24T17:43:18.140Z,1537810998.140 [NAL9602](INFO): SBD MO Status=0, MOMSN=1556, MT Status=0, MTMSN=0
2018-09-24T17:43:39.892Z,1537811019.892 [NAL9602](INFO): SBD MO Status=1, MOMSN=1557, MT Status=0, MTMSN=0
2018-09-24T17:43:39.942Z,1537811019.942 [NAL9602](INFO): Sent 213 bytes from file Logs/20180924T174057/Courier0003.lzma
2018-09-24T17:43:39.943Z,1537811019.943 [NAL9602](INFO): Packets left to send: 0
2018-09-24T17:43:39.945Z,1537811019.945 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T174057/Courier0003.lzma.parts/0000.sbd
2018-09-24T17:43:39.946Z,1537811019.946 [NAL9602](DEBUG): Completed sending Logs/20180924T174057/Courier0003.lzma
2018-09-24T17:43:55.631Z,1537811035.631 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T17:43:56.440Z,1537811036.440 [NAL9602](INFO): SBD MO Status=2, MOMSN=1558, MT Status=2, MTMSN=0
2018-09-24T17:43:56.440Z,1537811036.440 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-24T17:44:16.620Z,1537811056.620 [NAL9602](INFO): SBD MO Status=1, MOMSN=1558, MT Status=0, MTMSN=0
2018-09-24T17:44:16.669Z,1537811056.669 [NAL9602](INFO): Sent 331 bytes from file Logs/20180924T174057/Express0004.lzma
2018-09-24T17:44:16.670Z,1537811056.670 [NAL9602](INFO): Packets left to send: 0
2018-09-24T17:44:16.671Z,1537811056.671 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T174057/Express0004.lzma.parts/0000.sbd
2018-09-24T17:44:16.671Z,1537811056.671 [NAL9602](DEBUG): Completed sending Logs/20180924T174057/Express0004.lzma
2018-09-24T17:44:26.220Z,1537811066.220 [NAL9602](INFO): SBD MO Status=0, MOMSN=1559, MT Status=0, MTMSN=0
2018-09-24T17:44:26.330Z,1537811066.330 [Default:CheckIn:Read_Iridium] Stopped
2018-09-24T17:44:26.331Z,1537811066.331 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-24T17:44:26.331Z,1537811066.331 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-24T17:44:56.210Z,1537811096.210 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T17:44:57.013Z,1537811097.013 [NAL9602](INFO): Powering down
2018-09-24T17:45:42.373Z,1537811142.373 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.002704
2018-09-24T17:47:35.180Z,1537811255.180 [RDI_Pathfinder](ERROR): Failed to parse:
:BE,-32768,-32768,-32768,V
2018-09-24T17:47:36.761Z,1537811256.761 [DataOverHttps](IMPORTANT): SBD MTMSN=20180924T174728
2018-09-24T17:47:42.632Z,1537811262.632 [DataOverHttps](INFO): Received command:load Transport/keepstation.xml;set keepstation.NeedCommsTime 20 minute;run
2018-09-24T17:47:42.648Z,1537811262.648 [CommandLine](IMPORTANT): got command load ./Missions/Transport/keepstation.xml
2018-09-24T17:47:42.649Z,1537811262.649 [MissionManager](INFO): Loading Mission: ./Missions/Transport/keepstation.xml
2018-09-24T17:47:42.735Z,1537811262.735 [MissionManager](INFO): DefineArg keepstation.MissionTimeout = 4.000000 h
2018-09-24T17:47:42.739Z,1537811262.739 [MissionManager](INFO): DefineArg keepstation.NeedCommsTime = 45.000000 min
2018-09-24T17:47:42.742Z,1537811262.742 [MissionManager](INFO): DefineArg keepstation.Latitude = nan arcdeg
2018-09-24T17:47:42.745Z,1537811262.745 [MissionManager](INFO): DefineArg keepstation.Longitude = nan arcdeg
2018-09-24T17:47:42.748Z,1537811262.748 [MissionManager](INFO): DefineArg keepstation.Depth = 30.000000 m
2018-09-24T17:47:42.751Z,1537811262.751 [MissionManager](INFO): DefineArg keepstation.ApproachDepth = 15.000000 m
2018-09-24T17:47:42.755Z,1537811262.755 [MissionManager](INFO): DefineArg keepstation.DepthDeadband = 4.000000 m
2018-09-24T17:47:42.778Z,1537811262.778 [MissionManager](INFO): DefineArg keepstation.Speed = 0.750000 m/s
2018-09-24T17:47:42.785Z,1537811262.785 [MissionManager](INFO): DefineArg keepstation.Radius = 200.000000 m
2018-09-24T17:47:42.797Z,1537811262.797 [MissionManager](INFO): DefineArg keepstation.MaxDepth = 45.000000 m
2018-09-24T17:47:42.800Z,1537811262.800 [MissionManager](INFO): DefineArg keepstation.MinOffshore = 2.000000 km
2018-09-24T17:47:42.801Z,1537811262.801 [MissionManager](INFO): Inserting Stack: Missions/Insert/NeedComms.xml
2018-09-24T17:47:42.893Z,1537811262.893 [MissionManager](INFO): DefineArg keepstation:NeedComms.DiveInterval = 3.000000 h
2018-09-24T17:47:42.896Z,1537811262.896 [MissionManager](INFO): DefineArg keepstation:NeedComms.WaitForPitchUp = 10.000000 min
2018-09-24T17:47:42.900Z,1537811262.900 [MissionManager](INFO): DefineArg keepstation:NeedComms.SurfacePitch = 20.000000 arcdeg
2018-09-24T17:47:42.923Z,1537811262.923 [MissionManager](INFO): DefineArg keepstation:NeedComms.SurfaceDepthRate = nan m/s
2018-09-24T17:47:42.926Z,1537811262.926 [MissionManager](INFO): DefineArg keepstation:NeedComms.SurfaceSpeed = 1.000000 m/s
2018-09-24T17:47:42.929Z,1537811262.929 [MissionManager](INFO): DefineArg keepstation:NeedComms.GPSTimeout = 7.000000 min
2018-09-24T17:47:42.932Z,1537811262.932 [MissionManager](INFO): DefineArg keepstation:NeedComms.CommsTimeout = 30.000000 min
2018-09-24T17:47:42.953Z,1537811262.953 [keepstation:NeedComms:B.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-24T17:47:42.994Z,1537811262.994 [MissionManager](INFO): Inserting Stack: Missions/Insert/StandardEnvelopes.xml
2018-09-24T17:47:43.047Z,1537811263.047 [MissionManager](INFO): DefineArg keepstation:StandardEnvelopes.MinAltitude = 5.000000 m
2018-09-24T17:47:43.050Z,1537811263.050 [MissionManager](INFO): DefineArg keepstation:StandardEnvelopes.MaxDepth = 200.000000 m
2018-09-24T17:47:43.065Z,1537811263.065 [MissionManager](INFO): DefineArg keepstation:StandardEnvelopes.MinOffshore = 2000.000000 m
2018-09-24T17:47:43.066Z,1537811263.066 [keepstation:StandardEnvelopes:A.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-24T17:47:43.081Z,1537811263.081 [keepstation:StandardEnvelopes:B.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-24T17:47:43.105Z,1537811263.105 [keepstation:StandardEnvelopes:C.OffshoreEnvelope](DEBUG): Construct OffshoreEnvelope.
2018-09-24T17:47:43.115Z,1537811263.115 [keepstation:F.Pitch](DEBUG): Construct.
2018-09-24T17:47:43.133Z,1537811263.133 [keepstation:TransitToStation:A.Buoyancy](DEBUG): Construct Buoyancy.
2018-09-24T17:47:43.149Z,1537811263.149 [keepstation:TransitToStation:B.Pitch](DEBUG): Construct.
2018-09-24T17:47:43.154Z,1537811263.154 [keepstation:TransitToStation:C.SetSpeed](DEBUG): Construct.
2018-09-24T17:47:43.157Z,1537811263.157 [keepstation:TransitToStation:Wpt1.Waypoint](DEBUG): Construct Waypoint.
2018-09-24T17:47:43.178Z,1537811263.178 [keepstation:KeepStation:B.Pitch](DEBUG): Construct.
2018-09-24T17:47:43.184Z,1537811263.184 [keepstation:KeepStation:C.KeepStation](DEBUG): Construct KeepStation.
2018-09-24T17:47:43.200Z,1537811263.200 [keepstation:KeepStation:D.Wait](DEBUG): Construct Wait.
2018-09-24T17:47:43.226Z,1537811263.226 [MissionManager](DEBUG):
<?xml version="1.0" encoding="utf-8"?>
<Mission xmlns="Tethys"
xmlns:Control="Tethys/Control"
xmlns:Guidance="Tethys/Guidance"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="keepstation">
<Description>
Vehicle transits to desired waypoint (or stays put if none is commanded)
and stays within the specified radius.
</Description>
<DefineArg Name="MissionTimeout"><Description>
Maximum duration of mission
</Description><Units:hour/><Value>4</Value></DefineArg>
<DefineArg Name="NeedCommsTime"><Description>
How often to surface for commumications
</Description><Units:minute/><Value>45</Value></DefineArg>
<DefineArg Name="Latitude"><Description>
Latitude of waypoint to hold. If NaN, hold the latitude at start of
mission.
</Description><Units:degree/><Value>NaN</Value></DefineArg>
<DefineArg Name="Longitude"><Description>
Longitude of waypoint to hold. If NaN, hold the longitude at start of
mission.
</Description><Units:degree/><Value>NaN</Value></DefineArg>
<DefineArg Name="Depth"><Description>
Depth held during drift mode
</Description><Units:meter/><Value>30</Value></DefineArg>
<DefineArg Name="ApproachDepth"><Description>
Depth for initial approach to station.
</Description><Units:meter/><Value>15</Value></DefineArg>
<DefineArg Name="DepthDeadband"><Description>
How much vertical drift from the specified depth is allowed in drift
mode
</Description><Units:meter/><Value>4</Value></DefineArg>
<DefineArg Name="Speed"><Description>
Vehicle transit speed.
</Description><Units:meter_per_second/><Value>0.75</Value></DefineArg>
<DefineArg Name="Radius"><Description>
Radius of circle around waypoint to hold.
</Description><Units:meter/><Value>200</Value></DefineArg>
<DefineArg Name="MaxDepth"><Description>
Maximum allowable depth during the mission.
</Description><Units:meter/><Value>45</Value></DefineArg>
<DefineArg Name="MinOffshore"><Description>
Minimum distance from the shoreline to maintain
</Description><Units:kilometer/><Value>2</Value></DefineArg>
<!-- Missions should almost always start with a timeout and a NeedComms aggregate. -->
<Timeout Duration="MissionTimeout"/>
<Insert Filename="Insert/NeedComms.xml" Id="NeedComms"/>
<Assign><Sequence/><Arg Name="NeedComms:DiveInterval"/><Arg Name="NeedCommsTime"/></Assign>
<!-- Missions should almost always start with standard safety envelopes; most missions should not expose the parameters of these envelopes. -->
<Insert Filename="Insert/StandardEnvelopes.xml"/>
<Assign><Sequence/><Arg Name="StandardEnvelopes:MaxDepth"/><Arg Name="MaxDepth"/></Assign>
<Assign><Sequence/><Arg Name="StandardEnvelopes:MinOffshore"/><Arg Name="MinOffshore"/></Assign>
<!-- Most missions should not actively control mass or buoyancy. However, keepstation will want to control buoyancy, so only set mass here. -->
<Guidance:Pitch>
<Parallel/>
<Setting><Guidance:Pitch.massPosition/><Control:VerticalControl.massDefault/></Setting>
</Guidance:Pitch>
<!-- Check for additional instructions first. -->
<Call Id="StartingMission" RefId="NeedComms"/>
<!-- Then transit to specified location. TODO: Consider encapsulating in a standard Insert/ApproachTransit.xml -->
<Aggregate Id="TransitToStation">
<Description>
Need a separate aggregate for transit if we want to specify a
different depth for the approach.
</Description>
<Sequence/>
<Guidance:Buoyancy>
<Parallel/>
<Setting><Guidance:Buoyancy.position/><Control:VerticalControl.buoyancyNeutral/></Setting>
</Guidance:Buoyancy>
<Guidance:Pitch>
<Parallel/>
<Setting><Guidance:Pitch.depth/><Arg Name="ApproachDepth"/></Setting>
</Guidance:Pitch>
<Guidance:SetSpeed>
<Parallel/>
<Setting><Guidance:SetSpeed.speed/><Arg Name="Speed"/></Setting>
</Guidance:SetSpeed>
<Guidance:Waypoint Id="Wpt1">
<Sequence/>
<Setting><Guidance:Waypoint.latitude/><Arg Name="Latitude"/></Setting>
<Setting><Guidance:Waypoint.longitude/><Arg Name="Longitude"/></Setting>
</Guidance:Waypoint>
</Aggregate>
<Call Id="OnStation" RefId="NeedComms"/>
<Aggregate Id="KeepStation">
<Sequence/>
<!-- TODO: Consider making depth and depthDeadband into settings for the keepstation behavior. -->
<Assign><Parallel/><Control:VerticalControl.depthDeadband/><Arg Name="DepthDeadband"/></Assign>
<Guidance:Pitch>
<Parallel/>
<Setting><Guidance:Pitch.depth/><Arg Name="Depth"/></Setting>
</Guidance:Pitch>
<Guidance:KeepStation>
<Parallel/>
<Setting><Guidance:KeepStation.latitude/><Arg Name="Latitude"/></Setting>
<Setting><Guidance:KeepStation.longitude/><Arg Name="Longitude"/></Setting>
<Setting><Guidance:KeepStation.radius/><Arg Name="Radius"/></Setting>
<Setting><Guidance:KeepStation.speed/><Arg Name="Speed"/></Setting>
</Guidance:KeepStation>
<Guidance:Wait>
<Description>
Due to the way the KeepStation behavior is currently
implemented, we must run it in parallel and use a Wait to keep
from completing the mission before the timeout expires. However,
this new version of the mission uses a top-level timeout so that
the entire mission will not run for longer then MissionTimeout.
</Description>
<Sequence/>
<Setting><Guidance:Wait.duration/><Arg Name="MissionTimeout"/></Setting>
</Guidance:Wait>
</Aggregate>
</Mission>
2018-09-24T17:47:43.227Z,1537811263.227 [CommandLine](IMPORTANT): Loaded ./Missions/Transport/keepstation.xml
2018-09-24T17:47:45.471Z,1537811265.471 [CommandLine](IMPORTANT): got command set keepstation.NeedCommsTime 20.000000 minute
2018-09-24T17:47:45.472Z,1537811265.472 [CommandLine](IMPORTANT): got command run
2018-09-24T17:47:45.474Z,1537811265.474 [CommandLine](IMPORTANT): Running
2018-09-24T17:47:45.568Z,1537811265.568 [Default] Stopped
2018-09-24T17:47:45.568Z,1537811265.568 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-24T17:47:45.568Z,1537811265.568 [Default:B.GoToSurface] Stopped
2018-09-24T17:47:45.568Z,1537811265.568 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-24T17:47:45.569Z,1537811265.569 [Default:CheckIn] Stopped
2018-09-24T17:47:45.573Z,1537811265.573 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-24T17:47:45.573Z,1537811265.573 [Default:CheckIn:C.Wait] Stopped
2018-09-24T17:47:45.573Z,1537811265.573 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-24T17:47:45.573Z,1537811265.573 [MissionManager](IMPORTANT): Started mission keepstation
2018-09-24T17:47:45.574Z,1537811265.574 [keepstation] Running Loop=1
2018-09-24T17:47:45.574Z,1537811265.574 [keepstation](DEBUG): Aggregate::initialize keepstation
2018-09-24T17:47:45.574Z,1537811265.574 [keepstation:StandardEnvelopes] Running Loop=1
2018-09-24T17:47:45.574Z,1537811265.574 [keepstation:StandardEnvelopes](DEBUG): Aggregate::initialize keepstation:StandardEnvelopes
2018-09-24T17:47:45.574Z,1537811265.574 [keepstation:StandardEnvelopes:A.AltitudeEnvelope] Running Loop=1
2018-09-24T17:47:45.574Z,1537811265.574 [keepstation:StandardEnvelopes:A.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-24T17:47:45.575Z,1537811265.575 [keepstation:StandardEnvelopes:B.DepthEnvelope] Running Loop=1
2018-09-24T17:47:45.575Z,1537811265.575 [keepstation:StandardEnvelopes:B.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-24T17:47:45.575Z,1537811265.575 [keepstation:StandardEnvelopes:C.OffshoreEnvelope] Running Loop=1
2018-09-24T17:47:45.575Z,1537811265.575 [keepstation:StandardEnvelopes:C.OffshoreEnvelope](DEBUG): Initialize OffshoreEnvelopeComponent.
2018-09-24T17:47:45.575Z,1537811265.575 [keepstation:F.Pitch] Running Loop=1
2018-09-24T17:47:45.575Z,1537811265.575 [keepstation:F.Pitch](DEBUG): Initialize.
2018-09-24T17:47:45.575Z,1537811265.575 [keepstation:B] Running Loop=1
2018-09-24T17:47:45.576Z,1537811265.576 [keepstation:F.Pitch] Running Loop=1
2018-09-24T17:47:45.585Z,1537811265.585 [keepstation:StandardEnvelopes] Running Loop=1
2018-09-24T17:47:45.585Z,1537811265.585 [keepstation:StandardEnvelopes:C.OffshoreEnvelope] Running Loop=1
2018-09-24T17:47:45.598Z,1537811265.598 [keepstation:StandardEnvelopes:B.DepthEnvelope] Running Loop=1
2018-09-24T17:47:45.608Z,1537811265.608 [keepstation:StandardEnvelopes:A.AltitudeEnvelope] Running Loop=1
2018-09-24T17:47:45.623Z,1537811265.623 [keepstation:B] Stopped
2018-09-24T17:47:45.623Z,1537811265.623 [keepstation:D] Running Loop=1
2018-09-24T17:47:45.759Z,1537811265.759 [keepstation:D] Stopped
2018-09-24T17:47:45.759Z,1537811265.759 [keepstation:E] Running Loop=1
2018-09-24T17:47:46.175Z,1537811266.175 [keepstation:E] Stopped
2018-09-24T17:47:46.176Z,1537811266.176 [keepstation:StartingMission] Running Loop=1
2018-09-24T17:47:46.176Z,1537811266.176 [keepstation:StartingMission](DEBUG): Aggregate::initialize keepstation:StartingMission
2018-09-24T17:47:46.546Z,1537811266.546 [keepstation:NeedComms] Running Loop=1
2018-09-24T17:47:46.546Z,1537811266.546 [keepstation:NeedComms](DEBUG): Aggregate::initialize keepstation:NeedComms
2018-09-24T17:47:46.546Z,1537811266.546 [keepstation:NeedComms:B.GoToSurface] Running Loop=1
2018-09-24T17:47:46.546Z,1537811266.546 [keepstation:NeedComms:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-24T17:47:46.547Z,1537811266.547 [keepstation:NeedComms:B.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-24T17:47:46.547Z,1537811266.547 [keepstation:NeedComms:B.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-24T17:47:46.547Z,1537811266.547 [keepstation:NeedComms:B.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-24T17:47:46.548Z,1537811266.548 [keepstation:NeedComms:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-24T17:47:46.548Z,1537811266.548 [keepstation:NeedComms:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-24T17:47:46.549Z,1537811266.549 [keepstation:NeedComms:A] Running Loop=1
2018-09-24T17:47:46.555Z,1537811266.555 [keepstation:NeedComms:A](INFO): last time_fix was: 1537810849.000000 second since 1970/01/01T00:00:00Z
2018-09-24T17:47:46.556Z,1537811266.556 [keepstation:NeedComms:A] Stopped
2018-09-24T17:47:46.984Z,1537811266.984 [keepstation:NeedComms:C] Running Loop=1
2018-09-24T17:47:47.372Z,1537811267.372 [keepstation:NeedComms:C](DEBUG): Initialize ReadDataComponent to sense time_fix
2018-09-24T17:47:47.707Z,1537811267.707 [NAL9602](INFO): Powering up
2018-09-24T17:47:58.920Z,1537811278.920 [NAL9602](INFO): NAL9602 initialized
2018-09-24T17:48:49.852Z,1537811329.852 [NAL9602](INFO): SBD MO Status=2, MOMSN=1560, MT Status=2, MTMSN=0
2018-09-24T17:48:49.852Z,1537811329.852 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-24T17:49:07.058Z,1537811347.058 [NAL9602](INFO): SBD MO Status=2, MOMSN=1560, MT Status=2, MTMSN=0
2018-09-24T17:49:07.058Z,1537811347.058 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-24T17:49:54.124Z,1537811394.124 [NAL9602](INFO): SBD MO Status=0, MOMSN=1560, MT Status=0, MTMSN=0
2018-09-24T17:49:54.124Z,1537811394.124 [NAL9602](INFO): No messages in MT queue
2018-09-24T17:50:10.526Z,1537811410.526 [NAL9602](INFO): GPS fix at 20180924T175002: (36.847506, -121.927728)
2018-09-24T17:50:10.604Z,1537811410.604 [keepstation:NeedComms:C] Stopped
2018-09-24T17:50:10.609Z,1537811410.609 [keepstation:NeedComms:D] Running Loop=1
2018-09-24T17:50:11.009Z,1537811411.009 [keepstation:NeedComms:D](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-24T17:50:11.573Z,1537811411.573 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-24T17:50:11.573Z,1537811411.573 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-3768,-32768,V
2018-09-24T17:50:15.169Z,1537811415.169 [DataOverHttps](INFO): Sending 64 bytes from file Logs/20180924T174057/Courier0006.lzma
2018-09-24T17:50:15.941Z,1537811415.941 [DataOverHttps](INFO): Moved sent file to Logs/20180924T174057/Courier0006.lzma.bak
2018-09-24T17:50:15.942Z,1537811415.942 [DataOverHttps](INFO): SBD MOMSN=8574430
2018-09-24T17:50:26.275Z,1537811426.275 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180924T174057/Courier0009.lzma
2018-09-24T17:50:27.070Z,1537811427.070 [DataOverHttps](INFO): Moved sent file to Logs/20180924T174057/Courier0009.lzma.bak
2018-09-24T17:50:27.070Z,1537811427.070 [DataOverHttps](INFO): SBD MOMSN=8574433
2018-09-24T17:50:42.596Z,1537811442.596 [DataOverHttps](INFO): Sending 307 bytes from file Logs/20180924T174057/Express0007.lzma
2018-09-24T17:50:43.393Z,1537811443.393 [DataOverHttps](INFO): Moved sent file to Logs/20180924T174057/Express0007.lzma.bak
2018-09-24T17:50:43.393Z,1537811443.393 [DataOverHttps](INFO): SBD MOMSN=8574435
2018-09-24T17:50:47.467Z,1537811447.467 [NAL9602](INFO): Powering down
2018-09-24T17:50:54.569Z,1537811454.569 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180924T174057/Express0010.lzma
2018-09-24T17:50:55.366Z,1537811455.366 [DataOverHttps](INFO): Moved sent file to Logs/20180924T174057/Express0010.lzma.bak
2018-09-24T17:50:55.366Z,1537811455.366 [DataOverHttps](INFO): SBD MOMSN=8574444
2018-09-24T17:50:55.980Z,1537811455.980 [keepstation:NeedComms:D] Stopped
2018-09-24T17:50:55.981Z,1537811455.981 [keepstation:NeedComms:E] Running Loop=1
2018-09-24T17:50:56.227Z,1537811456.227 [keepstation:NeedComms:E](DEBUG): Initialize ReadDataComponent to sense time_fix
2018-09-24T17:50:56.567Z,1537811456.567 [NAL9602](INFO): Powering up
2018-09-24T17:51:07.523Z,1537811467.523 [NAL9602](INFO): NAL9602 initialized
2018-09-24T17:51:37.532Z,1537811497.532 [NAL9602](INFO): SBD MO Status=0, MOMSN=1561, MT Status=0, MTMSN=0
2018-09-24T17:51:37.532Z,1537811497.532 [NAL9602](INFO): No messages in MT queue
2018-09-24T17:52:30.985Z,1537811550.985 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for altitude
2018-09-24T17:52:30.986Z,1537811550.986 [RDI_Pathfinder](ERROR): Failed to parse:
:BD, +0.00, , +0.00, 0.00,2955.61
2018-09-24T17:55:33.482Z,1537811733.482 [NAL9602](INFO): GPS fix at 20180924T175524: (36.847741, -121.927949)
2018-09-24T17:55:33.563Z,1537811733.563 [keepstation:NeedComms:E] Stopped
2018-09-24T17:55:33.564Z,1537811733.564 [keepstation:NeedComms](INFO): Completed keepstation:NeedComms
2018-09-24T17:55:33.564Z,1537811733.564 [keepstation:NeedComms] Stopped
2018-09-24T17:55:33.564Z,1537811733.564 [keepstation:NeedComms](DEBUG): Aggregate::uninitialize keepstation:NeedComms
2018-09-24T17:55:33.564Z,1537811733.564 [keepstation:NeedComms:B.GoToSurface] Stopped
2018-09-24T17:55:33.564Z,1537811733.564 [keepstation:NeedComms:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-24T17:55:33.935Z,1537811733.935 [keepstation:StartingMission](INFO): Completed keepstation:StartingMission
2018-09-24T17:55:33.935Z,1537811733.935 [keepstation:StartingMission] Stopped
2018-09-24T17:55:33.935Z,1537811733.935 [keepstation:StartingMission](DEBUG): Aggregate::uninitialize keepstation:StartingMission
2018-09-24T17:55:33.936Z,1537811733.936 [keepstation:TransitToStation] Running Loop=1
2018-09-24T17:55:33.936Z,1537811733.936 [keepstation:TransitToStation](DEBUG): Aggregate::initialize keepstation:TransitToStation
2018-09-24T17:55:33.936Z,1537811733.936 [keepstation:TransitToStation:A.Buoyancy] Running Loop=1
2018-09-24T17:55:33.936Z,1537811733.936 [keepstation:TransitToStation:A.Buoyancy](DEBUG): Initialize Buoyancy Component.
2018-09-24T17:55:33.936Z,1537811733.936 [keepstation:TransitToStation:B.Pitch] Running Loop=1
2018-09-24T17:55:33.936Z,1537811733.936 [keepstation:TransitToStation:B.Pitch](DEBUG): Initialize.
2018-09-24T17:55:33.936Z,1537811733.936 [keepstation:TransitToStation:C.SetSpeed] Running Loop=1
2018-09-24T17:55:33.936Z,1537811733.936 [keepstation:TransitToStation:C.SetSpeed](DEBUG): Initialize.
2018-09-24T17:55:33.937Z,1537811733.937 [keepstation:TransitToStation:Wpt1.Waypoint] Running Loop=1
2018-09-24T17:55:33.937Z,1537811733.937 [keepstation:TransitToStation:Wpt1.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-24T17:55:34.356Z,1537811734.356 [keepstation:TransitToStation:C.SetSpeed] Running Loop=1
2018-09-24T17:55:34.371Z,1537811734.371 [keepstation:TransitToStation:B.Pitch] Running Loop=1
2018-09-24T17:55:34.381Z,1537811734.381 [keepstation:TransitToStation:A.Buoyancy] Running Loop=1
2018-09-24T17:55:37.925Z,1537811737.925 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for altitude
2018-09-24T17:55:37.926Z,1537811737.926 [RDI_Pathfinder](ERROR): Failed to parse:
:BD +0.00, +0.00, +0.00, 0.00,3142.57
2018-09-24T17:55:55.762Z,1537811755.762 [Radio_Surface](INFO): Powering down
2018-09-24T17:56:00.294Z,1537811760.294 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-24T17:56:00.294Z,1537811760.294 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,32768,-32768,V
2018-09-24T17:56:05.902Z,1537811765.902 [NAL9602](INFO): Powering down
2018-09-24T17:56:20.308Z,1537811780.308 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-24T17:56:20.309Z,1537811780.309 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092411015714,.1, 0.0,1448.9, 0
2018-09-24T17:56:26.671Z,1537811786.671 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T17:57:02.335Z,1537811822.335 [keepstation:TransitToStation:Wpt1.Waypoint] Stopped
2018-09-24T17:57:02.335Z,1537811822.335 [keepstation:TransitToStation:Wpt1.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-24T17:57:02.341Z,1537811822.341 [keepstation:TransitToStation](INFO): Completed keepstation:TransitToStation
2018-09-24T17:57:02.341Z,1537811822.341 [keepstation:TransitToStation] Stopped
2018-09-24T17:57:02.341Z,1537811822.341 [keepstation:TransitToStation](DEBUG): Aggregate::uninitialize keepstation:TransitToStation
2018-09-24T17:57:02.342Z,1537811822.342 [keepstation:TransitToStation:A.Buoyancy] Stopped
2018-09-24T17:57:02.342Z,1537811822.342 [keepstation:TransitToStation:A.Buoyancy](DEBUG): Uninitialize Buoyancy Component.
2018-09-24T17:57:02.342Z,1537811822.342 [keepstation:TransitToStation:B.Pitch] Stopped
2018-09-24T17:57:02.342Z,1537811822.342 [keepstation:TransitToStation:C.SetSpeed] Stopped
2018-09-24T17:57:02.342Z,1537811822.342 [keepstation:TransitToStation:C.SetSpeed](DEBUG): Uninitialize.
2018-09-24T17:57:02.342Z,1537811822.342 [keepstation:OnStation] Running Loop=1
2018-09-24T17:57:02.342Z,1537811822.342 [keepstation:OnStation](DEBUG): Aggregate::initialize keepstation:OnStation
2018-09-24T17:57:02.730Z,1537811822.730 [keepstation:NeedComms] Running Loop=1
2018-09-24T17:57:02.730Z,1537811822.730 [keepstation:NeedComms](DEBUG): Aggregate::initialize keepstation:NeedComms
2018-09-24T17:57:02.730Z,1537811822.730 [keepstation:NeedComms:B.GoToSurface] Running Loop=1
2018-09-24T17:57:02.730Z,1537811822.730 [keepstation:NeedComms:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-24T17:57:02.731Z,1537811822.731 [keepstation:NeedComms:B.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-24T17:57:02.731Z,1537811822.731 [keepstation:NeedComms:B.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-24T17:57:02.732Z,1537811822.732 [keepstation:NeedComms:B.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-24T17:57:02.732Z,1537811822.732 [keepstation:NeedComms:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-24T17:57:02.732Z,1537811822.732 [keepstation:NeedComms:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-24T17:57:02.733Z,1537811822.733 [keepstation:NeedComms:A] Running Loop=1
2018-09-24T17:57:02.735Z,1537811822.735 [keepstation:NeedComms:A](INFO): last time_fix was: 1537811724.000000 second since 1970/01/01T00:00:00Z
2018-09-24T17:57:02.735Z,1537811822.735 [keepstation:NeedComms:A] Stopped
2018-09-24T17:57:27.096Z,1537811847.096 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T17:57:29.166Z,1537811849.166 [keepstation:NeedComms:C] Running Loop=1
2018-09-24T17:57:29.558Z,1537811849.558 [Radio_Surface](INFO): Powering up
2018-09-24T17:57:29.934Z,1537811849.934 [NAL9602](INFO): Powering up
2018-09-24T17:57:41.106Z,1537811861.106 [NAL9602](INFO): NAL9602 initialized
2018-09-24T17:58:01.896Z,1537811881.896 [DataOverHttps](INFO): setting unavailable, lastComms_.elapsed()=180.025101
2018-09-24T17:58:04.326Z,1537811884.326 [RDI_Pathfinder](ERROR): Failed to parse:
2018-09-24T17:58:13.904Z,1537811893.904 [NAL9602](INFO): SBD MO Status=2, MOMSN=1562, MT Status=2, MTMSN=0
2018-09-24T17:58:13.904Z,1537811893.904 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-24T17:58:55.100Z,1537811935.100 [NAL9602](INFO): SBD MO Status=2, MOMSN=1562, MT Status=2, MTMSN=0
2018-09-24T17:58:55.100Z,1537811935.100 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-24T17:59:05.105Z,1537811945.105 [NAL9602](INFO): SBD MO Status=0, MOMSN=1562, MT Status=0, MTMSN=0
2018-09-24T17:59:05.105Z,1537811945.105 [NAL9602](INFO): No messages in MT queue
2018-09-24T17:59:06.322Z,1537811946.322 [NAL9602](INFO): GPS fix at 20180924T175856: (36.848363, -121.927784)
2018-09-24T17:59:06.371Z,1537811946.371 [keepstation:NeedComms:C] Stopped
2018-09-24T17:59:06.372Z,1537811946.372 [keepstation:NeedComms:D] Running Loop=1
2018-09-24T17:59:25.232Z,1537811965.232 [NAL9602](INFO): SBD MO Status=2, MOMSN=1563, MT Status=2, MTMSN=0
2018-09-24T17:59:25.232Z,1537811965.232 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-24T17:59:27.228Z,1537811967.228 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T17:59:37.352Z,1537811977.352 [NAL9602](INFO): SBD MO Status=1, MOMSN=1563, MT Status=0, MTMSN=0
2018-09-24T17:59:37.409Z,1537811977.409 [NAL9602](INFO): Sent 62 bytes from file Logs/20180924T174057/Courier0012.lzma
2018-09-24T17:59:37.409Z,1537811977.409 [NAL9602](INFO): Packets left to send: 0
2018-09-24T17:59:37.411Z,1537811977.411 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T174057/Courier0012.lzma.parts/0000.sbd
2018-09-24T17:59:37.411Z,1537811977.411 [NAL9602](DEBUG): Completed sending Logs/20180924T174057/Courier0012.lzma
2018-09-24T17:59:55.460Z,1537811995.460 [NAL9602](INFO): SBD MO Status=2, MOMSN=1564, MT Status=2, MTMSN=0
2018-09-24T17:59:55.461Z,1537811995.461 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-24T18:00:06.816Z,1537812006.816 [NAL9602](INFO): SBD MO Status=1, MOMSN=1564, MT Status=0, MTMSN=0
2018-09-24T18:00:06.870Z,1537812006.870 [NAL9602](INFO): Sent 141 bytes from file Logs/20180924T174057/Express0013.lzma
2018-09-24T18:00:06.870Z,1537812006.870 [NAL9602](INFO): Packets left to send: 0
2018-09-24T18:00:06.877Z,1537812006.877 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T174057/Express0013.lzma.parts/0000.sbd
2018-09-24T18:00:06.878Z,1537812006.878 [NAL9602](DEBUG): Completed sending Logs/20180924T174057/Express0013.lzma
2018-09-24T18:00:26.012Z,1537812026.012 [NAL9602](INFO): SBD MO Status=0, MOMSN=1565, MT Status=0, MTMSN=0
2018-09-24T18:00:26.125Z,1537812026.125 [keepstation:NeedComms:D] Stopped
2018-09-24T18:00:26.126Z,1537812026.126 [keepstation:NeedComms:E] Running Loop=1
2018-09-24T18:00:27.608Z,1537812027.608 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:00:28.414Z,1537812028.414 [NAL9602](INFO): GPS fix at 20180924T180019: (36.848437, -121.927762)
2018-09-24T18:00:28.491Z,1537812028.491 [keepstation:NeedComms:E] Stopped
2018-09-24T18:00:28.492Z,1537812028.492 [keepstation:NeedComms](INFO): Completed keepstation:NeedComms
2018-09-24T18:00:28.492Z,1537812028.492 [keepstation:NeedComms] Stopped
2018-09-24T18:00:28.492Z,1537812028.492 [keepstation:NeedComms](DEBUG): Aggregate::uninitialize keepstation:NeedComms
2018-09-24T18:00:28.492Z,1537812028.492 [keepstation:NeedComms:B.GoToSurface] Stopped
2018-09-24T18:00:28.492Z,1537812028.492 [keepstation:NeedComms:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-24T18:00:28.906Z,1537812028.906 [keepstation:OnStation](INFO): Completed keepstation:OnStation
2018-09-24T18:00:28.906Z,1537812028.906 [keepstation:OnStation] Stopped
2018-09-24T18:00:28.906Z,1537812028.906 [keepstation:OnStation](DEBUG): Aggregate::uninitialize keepstation:OnStation
2018-09-24T18:00:28.906Z,1537812028.906 [keepstation:KeepStation] Running Loop=1
2018-09-24T18:00:28.907Z,1537812028.907 [keepstation:KeepStation](DEBUG): Aggregate::initialize keepstation:KeepStation
2018-09-24T18:00:28.907Z,1537812028.907 [keepstation:KeepStation:A] Running Loop=1
2018-09-24T18:00:28.907Z,1537812028.907 [keepstation:KeepStation:B.Pitch] Running Loop=1
2018-09-24T18:00:28.907Z,1537812028.907 [keepstation:KeepStation:B.Pitch](DEBUG): Initialize.
2018-09-24T18:00:28.907Z,1537812028.907 [keepstation:KeepStation:C.KeepStation] Running Loop=1
2018-09-24T18:00:28.907Z,1537812028.907 [keepstation:KeepStation:C.KeepStation](DEBUG): Initialize KeepStationComponent.
2018-09-24T18:00:28.908Z,1537812028.908 [keepstation:KeepStation:D.Wait] Running Loop=1
2018-09-24T18:00:28.908Z,1537812028.908 [keepstation:KeepStation:D.Wait](DEBUG): Initialize Wait Component.
2018-09-24T18:00:29.298Z,1537812029.298 [keepstation:KeepStation:C.KeepStation] Running Loop=1
2018-09-24T18:00:29.309Z,1537812029.309 [keepstation:KeepStation:B.Pitch] Running Loop=1
2018-09-24T18:00:29.323Z,1537812029.323 [keepstation:KeepStation:A] Running Loop=1
2018-09-24T18:01:01.627Z,1537812061.627 [NAL9602](INFO): Powering down
2018-09-24T18:01:03.055Z,1537812063.055 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.002812
2018-09-24T18:01:45.912Z,1537812105.912 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for altitude
2018-09-24T18:01:45.912Z,1537812105.912 [RDI_Pathfinder](ERROR): Failed to parse:
:BD, +0.00, , +0.00, 0.00,3510.48
2018-09-24T18:04:28.297Z,1537812268.297 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:05:08.692Z,1537812308.692 [DataOverHttps](INFO): setting unavailable, lastComms_.elapsed()=180.399338
2018-09-24T18:06:16.483Z,1537812376.483 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.002784
2018-09-24T18:07:29.672Z,1537812449.672 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:08:29.683Z,1537812509.683 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:09:16.896Z,1537812556.896 [DataOverHttps](INFO): setting unavailable, lastComms_.elapsed()=180.415329
2018-09-24T18:09:23.030Z,1537812563.030 [Radio_Surface](INFO): Powering down
2018-09-24T18:09:44.043Z,1537812584.043 [Radio_Surface](INFO): Powering up
2018-09-24T18:10:30.068Z,1537812630.068 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:11:17.422Z,1537812677.422 [Radio_Surface](INFO): Powering down
2018-09-24T18:11:30.477Z,1537812690.477 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:11:32.370Z,1537812692.370 [Radio_Surface](INFO): Powering up
2018-09-24T18:12:05.538Z,1537812725.538 [Radio_Surface](INFO): Powering down
2018-09-24T18:12:30.618Z,1537812750.618 [Radio_Surface](INFO): Powering up
2018-09-24T18:12:30.884Z,1537812750.884 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:12:36.274Z,1537812756.274 [Radio_Surface](INFO): Powering down
2018-09-24T18:12:42.738Z,1537812762.738 [Radio_Surface](INFO): Powering up
2018-09-24T18:12:48.394Z,1537812768.394 [Radio_Surface](INFO): Powering down
2018-09-24T18:13:30.868Z,1537812810.868 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:14:20.519Z,1537812860.519 [BPC1](INFO): Calculating totals. Valid battery stick count: 56. Valid reserve battery stick count: 6.
2018-09-24T18:14:31.268Z,1537812871.268 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:15:31.268Z,1537812931.268 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:16:31.272Z,1537812991.272 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:17:31.678Z,1537813051.678 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:18:32.069Z,1537813112.069 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:19:32.091Z,1537813172.091 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:20:28.521Z,1537813228.521 [keepstation:NeedComms] Running Loop=1
2018-09-24T18:20:28.521Z,1537813228.521 [keepstation:NeedComms](DEBUG): Aggregate::initialize keepstation:NeedComms
2018-09-24T18:20:28.521Z,1537813228.521 [keepstation:NeedComms:B.GoToSurface] Running Loop=1
2018-09-24T18:20:28.521Z,1537813228.521 [keepstation:NeedComms:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-24T18:20:28.522Z,1537813228.522 [keepstation:NeedComms:B.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-24T18:20:28.522Z,1537813228.522 [keepstation:NeedComms:B.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-24T18:20:28.522Z,1537813228.522 [keepstation:NeedComms:B.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-24T18:20:28.523Z,1537813228.523 [keepstation:NeedComms:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-24T18:20:28.523Z,1537813228.523 [keepstation:NeedComms:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-24T18:20:28.524Z,1537813228.524 [keepstation:NeedComms:A] Running Loop=1
2018-09-24T18:20:28.525Z,1537813228.525 [keepstation:NeedComms:A](INFO): last time_fix was: 1537812019.000000 second since 1970/01/01T00:00:00Z
2018-09-24T18:20:28.526Z,1537813228.526 [keepstation:NeedComms:A] Stopped
2018-09-24T18:20:32.639Z,1537813232.639 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:21:00.271Z,1537813260.271 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-24T18:21:00.271Z,1537813260.271 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,1809241126371-0.1, 0.0,1448.9, 0
2018-09-24T18:21:32.819Z,1537813292.819 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:21:43.423Z,1537813303.423 [RDI_Pathfinder](ERROR): Failed to parse:
0e8c,0fff,*13.657,*-0.164,*0.000
2018-09-24T18:22:23.030Z,1537813343.030 [keepstation:NeedComms:C] Running Loop=1
2018-09-24T18:22:23.195Z,1537813343.195 [Radio_Surface](INFO): Powering up
2018-09-24T18:22:23.782Z,1537813343.782 [NAL9602](INFO): Powering up
2018-09-24T18:22:33.101Z,1537813353.101 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:22:34.706Z,1537813354.706 [NAL9602](INFO): NAL9602 initialized
2018-09-24T18:22:44.610Z,1537813364.610 [Radio_Surface](INFO): Powering down
2018-09-24T18:22:57.138Z,1537813377.138 [Radio_Surface](INFO): Powering up
2018-09-24T18:23:17.917Z,1537813397.917 [NAL9602](IMPORTANT): SBD MO Status=0, MOMSN=1566, MT Status=1, MTMSN=78
2018-09-24T18:23:17.917Z,1537813397.917 [NAL9602](INFO): Data available in MT queue
2018-09-24T18:23:18.401Z,1537813398.401 [NAL9602](INFO): Received command:stop
2018-09-24T18:23:18.461Z,1537813398.461 [CommandLine](IMPORTANT): got command stop
2018-09-24T18:23:18.461Z,1537813398.461 [Supervisor](INFO): Stop Mission called by CommandLine::commandStop
2018-09-24T18:23:18.762Z,1537813398.762 [MissionManager](INFO): MissionManager is completed.
2018-09-24T18:23:18.762Z,1537813398.762 [MissionManager](INFO): Uninitializing Mission keepstation
2018-09-24T18:23:18.763Z,1537813398.763 [keepstation] Stopped
2018-09-24T18:23:18.763Z,1537813398.763 [keepstation](DEBUG): Aggregate::uninitialize keepstation
2018-09-24T18:23:18.763Z,1537813398.763 [keepstation:NeedComms] Stopped
2018-09-24T18:23:18.763Z,1537813398.763 [keepstation:NeedComms](DEBUG): Aggregate::uninitialize keepstation:NeedComms
2018-09-24T18:23:18.763Z,1537813398.763 [keepstation:NeedComms:B.GoToSurface] Stopped
2018-09-24T18:23:18.763Z,1537813398.763 [keepstation:NeedComms:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-24T18:23:18.763Z,1537813398.763 [keepstation:NeedComms:C] Stopped
2018-09-24T18:23:18.763Z,1537813398.763 [keepstation:StandardEnvelopes] Stopped
2018-09-24T18:23:18.763Z,1537813398.763 [keepstation:StandardEnvelopes](DEBUG): Aggregate::uninitialize keepstation:StandardEnvelopes
2018-09-24T18:23:18.763Z,1537813398.763 [keepstation:StandardEnvelopes:A.AltitudeEnvelope] Stopped
2018-09-24T18:23:18.764Z,1537813398.764 [keepstation:StandardEnvelopes:A.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-24T18:23:18.764Z,1537813398.764 [keepstation:StandardEnvelopes:B.DepthEnvelope] Stopped
2018-09-24T18:23:18.764Z,1537813398.764 [keepstation:StandardEnvelopes:B.DepthEnvelope](DEBUG): Uninitialize.
2018-09-24T18:23:18.764Z,1537813398.764 [keepstation:StandardEnvelopes:C.OffshoreEnvelope] Stopped
2018-09-24T18:23:18.764Z,1537813398.764 [keepstation:StandardEnvelopes:C.OffshoreEnvelope](DEBUG): Uninitialize OffshoreEnvelopeComponent.
2018-09-24T18:23:18.764Z,1537813398.764 [keepstation:F.Pitch] Stopped
2018-09-24T18:23:18.764Z,1537813398.764 [keepstation:KeepStation] Stopped
2018-09-24T18:23:18.764Z,1537813398.764 [keepstation:KeepStation](DEBUG): Aggregate::uninitialize keepstation:KeepStation
2018-09-24T18:23:18.764Z,1537813398.764 [keepstation:KeepStation:A] Stopped
2018-09-24T18:23:18.764Z,1537813398.764 [keepstation:KeepStation:B.Pitch] Stopped
2018-09-24T18:23:18.764Z,1537813398.764 [keepstation:KeepStation:C.KeepStation] Stopped
2018-09-24T18:23:18.764Z,1537813398.764 [keepstation:KeepStation:C.KeepStation](DEBUG): Uninitialize KeepStationComponent.
2018-09-24T18:23:18.765Z,1537813398.765 [keepstation:KeepStation:D.Wait] Stopped
2018-09-24T18:23:18.765Z,1537813398.765 [keepstation:KeepStation:D.Wait](DEBUG): Uninitialize Wait Component.
2018-09-24T18:23:19.185Z,1537813399.185 [MissionManager](IMPORTANT): Started mission Default
2018-09-24T18:23:19.185Z,1537813399.185 [Default] Running Loop=1
2018-09-24T18:23:19.185Z,1537813399.185 [Default](DEBUG): Aggregate::initialize Default
2018-09-24T18:23:19.185Z,1537813399.185 [Default:B.GoToSurface] Running Loop=1
2018-09-24T18:23:19.186Z,1537813399.186 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-24T18:23:19.186Z,1537813399.186 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-24T18:23:19.186Z,1537813399.186 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-24T18:23:19.187Z,1537813399.187 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-24T18:23:19.187Z,1537813399.187 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-24T18:23:19.187Z,1537813399.187 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-24T18:23:19.188Z,1537813399.188 [Default:A.Wait] Running Loop=1
2018-09-24T18:23:19.188Z,1537813399.188 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-24T18:23:32.380Z,1537813412.380 [Default:A.Wait](INFO): Done Waiting.
2018-09-24T18:23:32.380Z,1537813412.380 [Default:A.Wait] Stopped
2018-09-24T18:23:32.380Z,1537813412.380 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-24T18:23:32.738Z,1537813412.738 [Default:CheckIn] Running Loop=1
2018-09-24T18:23:32.738Z,1537813412.738 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-24T18:23:32.738Z,1537813412.738 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-24T18:23:33.500Z,1537813413.500 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:24:33.500Z,1537813473.500 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:25:33.504Z,1537813533.504 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:26:33.904Z,1537813593.904 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:26:34.715Z,1537813594.715 [NAL9602](INFO): GPS fix at 20180924T182626: (36.849043, -121.929379)
2018-09-24T18:26:34.770Z,1537813594.770 [Default:CheckIn:Read_GPS] Stopped
2018-09-24T18:26:34.771Z,1537813594.771 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-24T18:27:19.256Z,1537813639.256 [NAL9602](INFO): SBD MO Status=2, MOMSN=1567, MT Status=2, MTMSN=0
2018-09-24T18:27:19.256Z,1537813639.256 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-24T18:27:34.451Z,1537813654.451 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:28:30.248Z,1537813710.248 [NAL9602](INFO): SBD MO Status=1, MOMSN=1567, MT Status=0, MTMSN=0
2018-09-24T18:28:30.301Z,1537813710.301 [NAL9602](INFO): Sent 225 bytes from file Logs/20180924T174057/Courier0015.lzma
2018-09-24T18:28:30.301Z,1537813710.301 [NAL9602](INFO): Packets left to send: 0
2018-09-24T18:28:30.303Z,1537813710.303 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T174057/Courier0015.lzma.parts/0000.sbd
2018-09-24T18:28:30.303Z,1537813710.303 [NAL9602](DEBUG): Completed sending Logs/20180924T174057/Courier0015.lzma
2018-09-24T18:28:34.785Z,1537813714.785 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:28:43.990Z,1537813723.990 [NAL9602](INFO): SBD MO Status=1, MOMSN=1568, MT Status=0, MTMSN=0
2018-09-24T18:28:44.041Z,1537813724.041 [NAL9602](INFO): Sent 287 bytes from file Logs/20180924T174057/Express0016.lzma
2018-09-24T18:28:44.041Z,1537813724.041 [NAL9602](INFO): Packets left to send: 0
2018-09-24T18:28:44.043Z,1537813724.043 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T174057/Express0016.lzma.parts/0000.sbd
2018-09-24T18:28:44.043Z,1537813724.043 [NAL9602](DEBUG): Completed sending Logs/20180924T174057/Express0016.lzma
2018-09-24T18:28:54.392Z,1537813734.392 [NAL9602](INFO): SBD MO Status=0, MOMSN=1569, MT Status=0, MTMSN=0
2018-09-24T18:29:24.199Z,1537813764.199 [NAL9602](INFO): SBD MO Status=1, MOMSN=1570, MT Status=0, MTMSN=0
2018-09-24T18:29:24.249Z,1537813764.249 [NAL9602](INFO): Sent 25 bytes from file Logs/20180924T174057/Courier0018.lzma
2018-09-24T18:29:24.249Z,1537813764.249 [NAL9602](INFO): Packets left to send: 0
2018-09-24T18:29:24.251Z,1537813764.251 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T174057/Courier0018.lzma.parts/0000.sbd
2018-09-24T18:29:24.251Z,1537813764.251 [NAL9602](DEBUG): Completed sending Logs/20180924T174057/Courier0018.lzma
2018-09-24T18:29:34.727Z,1537813774.727 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:29:35.540Z,1537813775.540 [NAL9602](INFO): SBD MO Status=1, MOMSN=1571, MT Status=0, MTMSN=0
2018-09-24T18:29:35.589Z,1537813775.589 [NAL9602](INFO): Sent 70 bytes from file Logs/20180924T174057/Express0019.lzma
2018-09-24T18:29:35.589Z,1537813775.589 [NAL9602](INFO): Packets left to send: 0
2018-09-24T18:29:35.591Z,1537813775.591 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T174057/Express0019.lzma.parts/0000.sbd
2018-09-24T18:29:35.591Z,1537813775.591 [NAL9602](DEBUG): Completed sending Logs/20180924T174057/Express0019.lzma
2018-09-24T18:29:47.129Z,1537813787.129 [NAL9602](INFO): SBD MO Status=0, MOMSN=1572, MT Status=0, MTMSN=0
2018-09-24T18:29:47.260Z,1537813787.260 [Default:CheckIn:Read_Iridium] Stopped
2018-09-24T18:29:47.269Z,1537813787.269 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-24T18:29:47.269Z,1537813787.269 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-24T18:30:17.922Z,1537813817.922 [NAL9602](INFO): Powering down
2018-09-24T18:30:35.116Z,1537813835.116 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:31:35.116Z,1537813895.116 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:32:35.516Z,1537813955.516 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:33:35.916Z,1537814015.916 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:34:36.315Z,1537814076.315 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:34:47.969Z,1537814087.969 [Default:CheckIn:C.Wait](INFO): Done Waiting.
2018-09-24T18:34:47.970Z,1537814087.970 [Default:CheckIn:C.Wait] Stopped
2018-09-24T18:34:47.970Z,1537814087.970 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-24T18:34:47.970Z,1537814087.970 [Default:CheckIn:D] Running Loop=1
2018-09-24T18:34:48.360Z,1537814088.360 [Default:CheckIn:D] Stopped
2018-09-24T18:34:48.360Z,1537814088.360 [Default:CheckIn:E] Running Loop=1
2018-09-24T18:34:48.768Z,1537814088.768 [Default:CheckIn:E](IMPORTANT): Default mission has been running for 11.486243 min
2018-09-24T18:34:48.769Z,1537814088.769 [Default:CheckIn:E] Stopped
2018-09-24T18:34:48.769Z,1537814088.769 [Default:CheckIn](INFO): Completed Default:CheckIn
2018-09-24T18:34:48.769Z,1537814088.769 [Default:CheckIn] Stopped
2018-09-24T18:34:48.769Z,1537814088.769 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-24T18:34:48.769Z,1537814088.769 [Default:CheckIn](INFO): Running loop #2
2018-09-24T18:34:48.770Z,1537814088.770 [Default:CheckIn] Running Loop=2
2018-09-24T18:34:48.770Z,1537814088.770 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-24T18:34:48.770Z,1537814088.770 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-24T18:34:49.518Z,1537814089.518 [NAL9602](INFO): Powering up
2018-09-24T18:35:00.331Z,1537814100.331 [NAL9602](INFO): NAL9602 initialized
2018-09-24T18:35:17.124Z,1537814117.124 [NAL9602](INFO): SBD MO Status=0, MOMSN=1573, MT Status=0, MTMSN=0
2018-09-24T18:35:17.124Z,1537814117.124 [NAL9602](INFO): No messages in MT queue
2018-09-24T18:35:36.316Z,1537814136.316 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:36:19.380Z,1537814179.380 [NAL9602](INFO): GPS fix at 20180924T183606: (36.849545, -121.929400)
2018-09-24T18:36:19.456Z,1537814179.456 [Default:CheckIn:Read_GPS] Stopped
2018-09-24T18:36:19.465Z,1537814179.465 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-24T18:36:40.428Z,1537814200.428 [NAL9602](INFO): SBD MO Status=2, MOMSN=1574, MT Status=2, MTMSN=0
2018-09-24T18:36:40.428Z,1537814200.428 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-24T18:36:59.364Z,1537814219.364 [NAL9602](INFO): SBD MO Status=2, MOMSN=1574, MT Status=2, MTMSN=0
2018-09-24T18:36:59.364Z,1537814219.364 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-24T18:37:11.204Z,1537814231.204 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.002652
2018-09-24T18:37:12.020Z,1537814232.020 [NAL9602](INFO): SBD MO Status=1, MOMSN=1574, MT Status=0, MTMSN=0
2018-09-24T18:37:12.081Z,1537814232.081 [NAL9602](INFO): Sent 64 bytes from file Logs/20180924T174057/Courier0021.lzma
2018-09-24T18:37:12.081Z,1537814232.081 [NAL9602](INFO): Packets left to send: 0
2018-09-24T18:37:12.086Z,1537814232.086 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T174057/Courier0021.lzma.parts/0000.sbd
2018-09-24T18:37:12.087Z,1537814232.087 [NAL9602](DEBUG): Completed sending Logs/20180924T174057/Courier0021.lzma
2018-09-24T18:37:15.524Z,1537814235.524 [DataOverHttps](INFO): Sending 172 bytes from file Logs/20180924T174057/Express0022.lzma
2018-09-24T18:37:16.293Z,1537814236.293 [DataOverHttps](INFO): Moved sent file to Logs/20180924T174057/Express0022.lzma.bak
2018-09-24T18:37:16.293Z,1537814236.293 [DataOverHttps](INFO): SBD MOMSN=8574624
2018-09-24T18:37:16.927Z,1537814236.927 [Default:CheckIn:Read_Iridium] Stopped
2018-09-24T18:37:16.928Z,1537814236.928 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-24T18:37:16.928Z,1537814236.928 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-24T18:37:45.554Z,1537814265.554 [NAL9602](INFO): Powering down
2018-09-24T18:38:22.190Z,1537814302.190 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-32768,V
2018-09-24T18:40:28.131Z,1537814428.131 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-32768,V
2018-09-24T18:42:17.354Z,1537814537.354 [Default:CheckIn:C.Wait](INFO): Done Waiting.
2018-09-24T18:42:17.354Z,1537814537.354 [Default:CheckIn:C.Wait] Stopped
2018-09-24T18:42:17.354Z,1537814537.354 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-24T18:42:17.354Z,1537814537.354 [Default:CheckIn:D] Running Loop=1
2018-09-24T18:42:17.764Z,1537814537.764 [Default:CheckIn:D] Stopped
2018-09-24T18:42:17.764Z,1537814537.764 [Default:CheckIn:E] Running Loop=1
2018-09-24T18:42:18.206Z,1537814538.206 [Default:CheckIn:E](IMPORTANT): Default mission has been running for 18.976316 min
2018-09-24T18:42:18.207Z,1537814538.207 [Default:CheckIn:E] Stopped
2018-09-24T18:42:18.207Z,1537814538.207 [Default:CheckIn](INFO): Completed Default:CheckIn
2018-09-24T18:42:18.207Z,1537814538.207 [Default:CheckIn] Stopped
2018-09-24T18:42:18.207Z,1537814538.207 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-24T18:42:18.207Z,1537814538.207 [Default:CheckIn](INFO): Running loop #3
2018-09-24T18:42:18.207Z,1537814538.207 [Default:CheckIn] Running Loop=3
2018-09-24T18:42:18.207Z,1537814538.207 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-24T18:42:18.208Z,1537814538.208 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-24T18:42:18.913Z,1537814538.913 [NAL9602](INFO): Powering up
2018-09-24T18:42:29.820Z,1537814549.820 [NAL9602](INFO): NAL9602 initialized
2018-09-24T18:42:41.035Z,1537814561.035 [NAL9602](INFO): SBD MO Status=0, MOMSN=1575, MT Status=0, MTMSN=0
2018-09-24T18:42:41.035Z,1537814561.035 [NAL9602](INFO): No messages in MT queue
2018-09-24T18:44:48.728Z,1537814688.728 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:45:12.735Z,1537814712.735 [NAL9602](INFO): GPS fix at 20180924T184503: (36.849968, -121.929361)
2018-09-24T18:45:12.785Z,1537814712.785 [Default:CheckIn:Read_GPS] Stopped
2018-09-24T18:45:12.785Z,1537814712.785 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-24T18:45:40.836Z,1537814740.836 [DataOverHttps](INFO): Sending 64 bytes from file Logs/20180924T174057/Courier0024.lzma
2018-09-24T18:45:43.984Z,1537814743.984 [DataOverHttps](INFO): Exceeded connection timeout, disconnecting.
2018-09-24T18:45:44.790Z,1537814744.790 [NAL9602](INFO): Powering down
2018-09-24T18:46:14.387Z,1537814774.387 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:46:26.795Z,1537814786.795 [DataOverHttps](INFO): setting unavailable, lastComms_.elapsed()=180.066193
2018-09-24T18:46:26.802Z,1537814786.802 [NAL9602](INFO): Powering up
2018-09-24T18:46:37.027Z,1537814797.027 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.002742
2018-09-24T18:46:37.845Z,1537814797.845 [NAL9602](INFO): NAL9602 initialized
2018-09-24T18:46:41.652Z,1537814801.652 [DataOverHttps](INFO): Sending 64 bytes from file Logs/20180924T174057/Courier0024.lzma
2018-09-24T18:46:42.443Z,1537814802.443 [DataOverHttps](INFO): Moved sent file to Logs/20180924T174057/Courier0024.lzma.bak
2018-09-24T18:46:42.443Z,1537814802.443 [DataOverHttps](INFO): SBD MOMSN=8574672
2018-09-24T18:46:51.499Z,1537814811.499 [DataOverHttps](INFO): Sending 138 bytes from file Logs/20180924T174057/Express0025.lzma
2018-09-24T18:46:52.269Z,1537814812.269 [DataOverHttps](INFO): Moved sent file to Logs/20180924T174057/Express0025.lzma.bak
2018-09-24T18:46:52.269Z,1537814812.269 [DataOverHttps](INFO): SBD MOMSN=8574676
2018-09-24T18:46:52.830Z,1537814812.830 [Default:CheckIn:Read_Iridium] Stopped
2018-09-24T18:46:52.831Z,1537814812.831 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-24T18:46:52.831Z,1537814812.831 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-24T18:47:11.582Z,1537814831.582 [NAL9602](INFO): Powering down
2018-09-24T18:49:30.622Z,1537814970.622 [CommandLine](IMPORTANT): got command load ./Missions/Science/trackPatch_yz.xml
2018-09-24T18:49:30.623Z,1537814970.623 [MissionManager](INFO): Loading Mission: ./Missions/Science/trackPatch_yz.xml
2018-09-24T18:49:31.038Z,1537814971.038 [MissionManager](INFO): DefineArg trackPatch.MinAltitude = 5.000000 m
2018-09-24T18:49:31.040Z,1537814971.040 [MissionManager](INFO): DefineArg trackPatch.MaxDepth = 65.000000 m
2018-09-24T18:49:31.042Z,1537814971.042 [MissionManager](INFO): DefineArg trackPatch.MinWaterDepth = 10.000000 m
2018-09-24T18:49:31.045Z,1537814971.045 [MissionManager](INFO): DefineArg trackPatch.MinOffshore = 2000.000000 m
2018-09-24T18:49:31.047Z,1537814971.047 [MissionManager](INFO): DefineArg trackPatch.NeedCommsTime = 180.000000 min
2018-09-24T18:49:31.090Z,1537814971.090 [MissionManager](INFO): DefineArg trackPatch.MissionTimeout = 56.000000 h
2018-09-24T18:49:31.093Z,1537814971.093 [MissionManager](INFO): DefineArg trackPatch.MassDefault = 0.000000 cm
2018-09-24T18:49:31.096Z,1537814971.096 [MissionManager](INFO): DefineArg trackPatch.BuoyancyNeutral = 205.000004 cc
2018-09-24T18:49:31.133Z,1537814971.133 [MissionManager](INFO): DefineArg trackPatch.YoYoMinDepth = 2.000000 m
2018-09-24T18:49:31.136Z,1537814971.136 [MissionManager](INFO): DefineArg trackPatch.YoYoMaxDepth = 10.000000 m
2018-09-24T18:49:31.138Z,1537814971.138 [MissionManager](INFO): DefineArg trackPatch.YoYoUpPitch = 20.000000 arcdeg
2018-09-24T18:49:31.140Z,1537814971.140 [MissionManager](INFO): DefineArg trackPatch.YoYoDownPitch = -20.000000 arcdeg
2018-09-24T18:49:31.179Z,1537814971.179 [MissionManager](INFO): DefineArg trackPatch.Speed = 1.000000 m/s
2018-09-24T18:49:31.181Z,1537814971.181 [MissionManager](INFO): DefineArg trackPatch.WpMaxDistance = 1000.000000 m
2018-09-24T18:49:31.183Z,1537814971.183 [MissionManager](INFO): DefineArg trackPatch.WpTimeout = 8000.000000 s
2018-09-24T18:49:31.185Z,1537814971.185 [MissionManager](INFO): DefineArg trackPatch.WaterFrame = 1 bool
2018-09-24T18:49:31.187Z,1537814971.187 [MissionManager](INFO): DefineArg trackPatch.Repeat = 20.000000 count
2018-09-24T18:49:31.202Z,1537814971.202 [MissionManager](INFO): DefineArg trackPatch.Turn = 90.000000 arcdeg
2018-09-24T18:49:31.204Z,1537814971.204 [MissionManager](INFO): DefineArg trackPatch.Reverse = 180.000000 arcdeg
2018-09-24T18:49:31.207Z,1537814971.207 [MissionManager](INFO): DefineArg trackPatch.TwoPi = 360.000000 arcdeg
2018-09-24T18:49:31.210Z,1537814971.210 [MissionManager](INFO): DefineArg trackPatch.LowPassWindowLen = 20.000000 count
2018-09-24T18:49:31.212Z,1537814971.212 [MissionManager](INFO): DefineArg trackPatch.PeakChlShallowBnd = 3.000000 m
2018-09-24T18:49:31.214Z,1537814971.214 [MissionManager](INFO): DefineArg trackPatch.PeakChlDeepBnd = 8.000000 m
2018-09-24T18:49:31.229Z,1537814971.229 [MissionManager](INFO): DefineArg trackPatch.FilterWidth = 4.000000 count
2018-09-24T18:49:31.231Z,1537814971.231 [MissionManager](INFO): DefineArg trackPatch.BeginThreshold = nan ug/l
2018-09-24T18:49:31.233Z,1537814971.233 [MissionManager](INFO): DefineArg trackPatch.OffPeakFraction = 80.000000 %
2018-09-24T18:49:31.235Z,1537814971.235 [MissionManager](INFO): DefineArg trackPatch.PatchMode = 0 bool
2018-09-24T18:49:31.238Z,1537814971.238 [MissionManager](INFO): DefineArg trackPatch.WpBearing = -90.000000 arcdeg
2018-09-24T18:49:31.240Z,1537814971.240 [MissionManager](INFO): DefineOutput trackPatch.PatchDetectOn = 0 bool
2018-09-24T18:49:31.280Z,1537814971.280 [MissionManager](INFO): DefineOutput trackPatch.WpDone = 0 bool
2018-09-24T18:49:31.283Z,1537814971.283 [MissionManager](INFO): DefineOutput trackPatch.PatchChl = nan ug/l
2018-09-24T18:49:31.312Z,1537814971.312 [MissionManager](INFO): DefineOutput trackPatch.PatchChlDepth = nan m
2018-09-24T18:49:31.315Z,1537814971.315 [MissionManager](INFO): DefineOutput trackPatch.PatchChlLatitude = nan arcdeg
2018-09-24T18:49:31.338Z,1537814971.338 [MissionManager](INFO): DefineOutput trackPatch.PatchChlLongitude = nan arcdeg
2018-09-24T18:49:31.341Z,1537814971.341 [MissionManager](INFO): DefineOutput trackPatch.PatchChlDistance = 0.000000 m
2018-09-24T18:49:31.342Z,1537814971.342 [trackPatch:A.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-24T18:49:31.361Z,1537814971.361 [trackPatch:B.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-24T18:49:31.366Z,1537814971.366 [MissionManager](INFO): Inserting Stack: Missions/Insert/Surface.xml
2018-09-24T18:49:31.521Z,1537814971.521 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.SurfaceDepthRate = nan m/s
2018-09-24T18:49:31.523Z,1537814971.523 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.SurfacePitch = 20.000000 arcdeg
2018-09-24T18:49:31.539Z,1537814971.539 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.SurfaceSpeed = 1.000000 m/s
2018-09-24T18:49:31.549Z,1537814971.549 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.IridiumTimeout = 30.000000 min
2018-09-24T18:49:31.551Z,1537814971.551 [MissionManager](INFO): DefineArg trackPatch:SurfaceCommsSplit.UnpackSplitAtSurface = 0 bool
2018-09-24T18:49:31.552Z,1537814971.552 [trackPatch:SurfaceCommsSplit:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-24T18:49:31.601Z,1537814971.601 [MissionManager](INFO): RedefineArg trackPatch:SurfaceCommsSplit.SurfacePitch = value:20.000000 arcdeg
2018-09-24T18:49:31.603Z,1537814971.603 [MissionManager](INFO): RedefineArg trackPatch:SurfaceCommsSplit.SurfaceSpeed = value:1.000000 m/s
2018-09-24T18:49:31.615Z,1537814971.615 [MissionManager](INFO): RedefineArg trackPatch:SurfaceCommsSplit.UnpackSplitAtSurface = value:1 bool
2018-09-24T18:49:31.616Z,1537814971.616 [MissionManager](INFO): Inserting Stack: Missions/Insert/Surface.xml
2018-09-24T18:49:31.696Z,1537814971.696 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.SurfaceDepthRate = nan m/s
2018-09-24T18:49:31.707Z,1537814971.707 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.SurfacePitch = 20.000000 arcdeg
2018-09-24T18:49:31.721Z,1537814971.721 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.SurfaceSpeed = 1.000000 m/s
2018-09-24T18:49:31.723Z,1537814971.723 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.IridiumTimeout = 30.000000 min
2018-09-24T18:49:31.737Z,1537814971.737 [MissionManager](INFO): DefineArg trackPatch:SurfaceComms:SurfaceComms.UnpackSplitAtSurface = 0 bool
2018-09-24T18:49:31.747Z,1537814971.747 [trackPatch:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-24T18:49:31.782Z,1537814971.782 [MissionManager](INFO): RedefineArg trackPatch:SurfaceComms:SurfaceComms.SurfacePitch = value:20.000000 arcdeg
2018-09-24T18:49:31.784Z,1537814971.784 [MissionManager](INFO): RedefineArg trackPatch:SurfaceComms:SurfaceComms.SurfaceSpeed = value:1.000000 m/s
2018-09-24T18:49:31.851Z,1537814971.851 [trackPatch:F.OffshoreEnvelope](DEBUG): Construct OffshoreEnvelope.
2018-09-24T18:49:31.877Z,1537814971.877 [trackPatch:G.WaterDepthEnvelope](DEBUG): Construct WaterDepthEnvelope.
2018-09-24T18:49:31.884Z,1537814971.884 [trackPatch:H.Pitch](DEBUG): Construct.
2018-09-24T18:49:31.902Z,1537814971.902 [trackPatch:I.Buoyancy](DEBUG): Construct Buoyancy.
2018-09-24T18:49:31.906Z,1537814971.906 [MissionManager](INFO): Inserting Stack: Missions/Insert/Science_yz.xml
2018-09-24T18:49:32.410Z,1537814972.410 [MissionManager](INFO): DefineArg trackPatch:Science.SampleISUS = 0 bool
2018-09-24T18:49:32.412Z,1537814972.412 [MissionManager](INFO): DefineArg trackPatch:Science.SampleISUSmaxPitch = 60.000000 arcdeg
2018-09-24T18:49:32.414Z,1537814972.414 [MissionManager](INFO): DefineArg trackPatch:Science.SampleISUSminPitch = -60.000000 arcdeg
2018-09-24T18:49:32.416Z,1537814972.416 [MissionManager](INFO): DefineArg trackPatch:Science.PeakDetectChlActive = 0 bool
2018-09-24T18:49:32.434Z,1537814972.434 [MissionManager](INFO): DefineArg trackPatch:Science.HighestChlPeakReportActive = 0 bool
2018-09-24T18:49:32.436Z,1537814972.436 [MissionManager](INFO): DefineArg trackPatch:Science.PatchTracking = 1 bool
2018-09-24T18:49:32.438Z,1537814972.438 [MissionManager](INFO): DefineArg trackPatch:Science.FilterWidthHorizontal = 3.000000 count
2018-09-24T18:49:32.440Z,1537814972.440 [MissionManager](INFO): DefineArg trackPatch:Science.NumProfilesSlidingwindow = 100.000000 count
2018-09-24T18:49:32.471Z,1537814972.471 [MissionManager](INFO): DefineArg trackPatch:Science.OffPeakFractionHorizontal = 80.000000 %
2018-09-24T18:49:32.472Z,1537814972.472 [MissionManager](INFO): DefineArg trackPatch:Science.PeakDetectNO3Active = 0 bool
2018-09-24T18:49:32.474Z,1537814972.474 [MissionManager](INFO): DefineArg trackPatch:Science.PeakDetectOilActive = 0 bool
2018-09-24T18:49:32.476Z,1537814972.476 [MissionManager](INFO): DefineArg trackPatch:Science.UpwardDerivativeOfTemperatureActive = 0 bool
2018-09-24T18:49:32.479Z,1537814972.479 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledAanderaaO2 = 0.000000 bool
2018-09-24T18:49:32.497Z,1537814972.497 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledNeilBrown = 0.000000 bool
2018-09-24T18:49:32.500Z,1537814972.500 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledSeabird = 0.000000 bool
2018-09-24T18:49:32.502Z,1537814972.502 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledTurbulence_NPS = 0.000000 bool
2018-09-24T18:49:32.505Z,1537814972.505 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledWetLabsBB2FL = 0.000000 bool
2018-09-24T18:49:32.507Z,1537814972.507 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledWetLabsSeaOWL_UV_A = 1.000000 bool
2018-09-24T18:49:32.521Z,1537814972.521 [MissionManager](INFO): DefineArg trackPatch:Science.EnabledISUS = 0.000000 bool
2018-09-24T18:49:32.524Z,1537814972.524 [MissionManager](INFO): DefineArg trackPatch:Science.LowPassWindowLength = 20.000000 count
2018-09-24T18:49:32.526Z,1537814972.526 [MissionManager](INFO): DefineArg trackPatch:Science.PeakChlShallowBound = 10.000000 m
2018-09-24T18:49:32.528Z,1537814972.528 [MissionManager](INFO): DefineArg trackPatch:Science.PeakChlDeepBound = 20.000000 m
2018-09-24T18:49:32.530Z,1537814972.530 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChl = 0.000000 ug/l
2018-09-24T18:49:32.532Z,1537814972.532 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlDepth = 0.000000 m
2018-09-24T18:49:32.547Z,1537814972.547 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlTemperature = 0.000000 degC
2018-09-24T18:49:32.549Z,1537814972.549 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlLatitude = nan arcdeg
2018-09-24T18:49:32.551Z,1537814972.551 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakChlLongitude = nan arcdeg
2018-09-24T18:49:32.554Z,1537814972.554 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3 = 0.000000 umol/l
2018-09-24T18:49:32.556Z,1537814972.556 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3Depth = 0.000000 m
2018-09-24T18:49:32.570Z,1537814972.570 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3Latitude = nan arcdeg
2018-09-24T18:49:32.572Z,1537814972.572 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakNO3Longitude = nan arcdeg
2018-09-24T18:49:32.575Z,1537814972.575 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChl = 0.000000 m
2018-09-24T18:49:32.577Z,1537814972.577 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlDepth = 0.000000 m
2018-09-24T18:49:32.579Z,1537814972.579 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlLatitude = nan arcdeg
2018-09-24T18:49:32.645Z,1537814972.645 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlLongitude = nan arcdeg
2018-09-24T18:49:32.648Z,1537814972.648 [MissionManager](INFO): DefineOutput trackPatch:Science.PatchChlDistance = nan m
2018-09-24T18:49:32.659Z,1537814972.659 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOil = 0.000000 kg/m3
2018-09-24T18:49:32.682Z,1537814972.682 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOilDepth = 0.000000 m
2018-09-24T18:49:32.684Z,1537814972.684 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOilLatitude = nan arcdeg
2018-09-24T18:49:32.698Z,1537814972.698 [MissionManager](INFO): DefineOutput trackPatch:Science.PeakOilLongitude = nan arcdeg
2018-09-24T18:49:32.752Z,1537814972.752 [trackPatch:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-24T18:49:32.786Z,1537814972.786 [trackPatch:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-24T18:49:32.822Z,1537814972.822 [trackPatch:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-24T18:49:32.878Z,1537814972.878 [trackPatch:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-24T18:49:32.910Z,1537814972.910 [MissionManager](INFO): RedefineArg trackPatch:Science.PeakDetectChlActive = value:1 bool
2018-09-24T18:49:32.912Z,1537814972.912 [MissionManager](INFO): RedefineArg trackPatch:Science.PatchTracking = value:1 bool
2018-09-24T18:49:32.921Z,1537814972.921 [MissionManager](INFO): RedefineArg trackPatch:Science.LowPassWindowLength = reader:trackPatch.LowPassWindowLen
2018-09-24T18:49:32.923Z,1537814972.923 [MissionManager](INFO): RedefineArg trackPatch:Science.PeakChlShallowBound = reader:trackPatch.PeakChlShallowBnd
2018-09-24T18:49:32.924Z,1537814972.924 [MissionManager](INFO): RedefineArg trackPatch:Science.PeakChlDeepBound = reader:trackPatch.PeakChlDeepBnd
2018-09-24T18:49:32.938Z,1537814972.938 [MissionManager](INFO): RedefineArg trackPatch:Science.OffPeakFractionHorizontal = reader:trackPatch.OffPeakFraction
2018-09-24T18:49:32.939Z,1537814972.939 [trackPatch:K.SetSpeed](DEBUG): Construct.
2018-09-24T18:49:32.951Z,1537814972.951 [trackPatch:L.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-24T18:49:32.960Z,1537814972.960 [trackPatch:M.YoYo](DEBUG): Construct YoYo.
2018-09-24T18:49:32.991Z,1537814972.991 [trackPatch:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-24T18:49:33.152Z,1537814973.152 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-24T18:49:33.180Z,1537814973.180 [trackPatch:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-24T18:49:33.257Z,1537814973.257 [trackPatch:PatchDetectHorizontal:InLegWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-24T18:49:33.309Z,1537814973.309 [trackPatch:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-24T18:49:33.455Z,1537814973.455 [MissionManager](DEBUG):
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
xmlns:Control="Tethys/Control"
xmlns:Guidance="Tethys/Guidance"
xmlns:Trigger="Tethys/Trigger"
xmlns:Units="Tethys/Units"
xmlns:Universal="Tethys/Universal"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
Tethys/Trigger http://okeanids.mbari.org/tethys/Xml/Trigger.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
Id="trackPatch">
<Description>
Vehicle runs yo-yos, with patch detect enabled for cholorphyll
concentration.
</Description>
<!-- Vehicle safety parameters -->
<DefineArg Name="MinAltitude"><Description>
Minimum altitude for the entire mission.
</Description><Units:meter/><Value>5</Value></DefineArg>
<DefineArg Name="MaxDepth"><Description>
Maximum depth for the entire mission.
</Description><Units:meter/><Value>65</Value></DefineArg>
<DefineArg Name="MinWaterDepth"><Description>
Minimum water depth for the entire mission.
</Description><Units:meter/><Value>10</Value></DefineArg>
<DefineArg Name="MinOffshore"><Description>
Minimum offshore distance for the entire mission.
</Description><Units:meter/><Value>2000</Value></DefineArg>
<DefineArg Name="NeedCommsTime"><Description>
Maximum time between surfacings for communications
</Description><Units:minute/><Value>180</Value></DefineArg>
<DefineArg Name="MissionTimeout"><Description>
Timeout for the entire mission
</Description><Units:hour/><Value>56</Value></DefineArg>
<DefineArg Name="MassDefault"><Description>
Static setting for mass during the mission. Defaults to massDefault
setting in the Config/Control.cfg file.
</Description><Control:VerticalControl.massDefault/></DefineArg>
<DefineArg Name="BuoyancyNeutral"><Description>
Buoyancy bladder position while performing the YoYo behavior. Defaults
to buoyancyNeutral setting in the Config/Control.cfg file.
</Description><Control:VerticalControl.buoyancyNeutral/></DefineArg>
<!-- Basic guidance settings -->
<DefineArg Name="YoYoMinDepth"><Description>
Minimum depth during yo-yo's.
</Description><Units:meter/><Value>2.0</Value></DefineArg>
<DefineArg Name="YoYoMaxDepth"><Description>
Maximum depth during yo-yo's.
</Description><Units:meter/><Value>10.0</Value></DefineArg>
<DefineArg Name="YoYoUpPitch"><Description>
Pitch when yo-yo's are ascending.
</Description><Units:degree/><Value>20.0</Value></DefineArg>
<DefineArg Name="YoYoDownPitch"><Description>
Pitch when yo-yo's are descending.
</Description><Units:degree/><Value>-20.0</Value></DefineArg>
<DefineArg Name="Speed"><Description>
Vehicle speed.
</Description><Units:meter_per_second/><Value>1</Value></DefineArg>
<DefineArg Name="WpMaxDistance"><Description>
Maximum length of each tracking leg
<!--debug
</Description><Units:meter/><Value>7500</Value></DefineArg>
-->
</Description><Units:meter/><Value>1000</Value></DefineArg>
<DefineArg Name="WpTimeout"><Description>
Maximum duration of each tracking leg
</Description><Units:second/><Value>8000</Value></DefineArg>
<DefineArg Name="WaterFrame"><Description>
Set WaterFrame true to drive towards waypoints in the water frame of
reference
</Description><True/></DefineArg>
<DefineArg Name="Repeat"><Description>
Maximum number of tracking legs
</Description><Units:count/><Value>20</Value></DefineArg>
<!-- Constant settings for each tracking leg -->
<DefineArg Name="Turn"><Description>
Amount to turn at each leg
</Description><Units:degree/><Value>90</Value></DefineArg>
<DefineArg Name="Reverse"><Description>
Change in bearing which reverses vehicle direction
</Description><Units:degree/><Value>180</Value></DefineArg>
<DefineArg Name="TwoPi"><Description>
Applied to stop run-up of angles
</Description><Units:degree/><Value>360</Value></DefineArg>
<DefineArg Name="LowPassWindowLen"><Description>
Low-pass window length (based on depth sensor sampling interval 0.4
second) for low-pass filtering.
</Description><Units:count/><Value>20</Value></DefineArg>
<DefineArg Name="PeakChlShallowBnd"><Description>
Shallow depth bound for detecting chl peak on each descent or ascent
profile.
<!--debug
</Description><Units:meter/><Value>NaN</Value></DefineArg>
-->
</Description><Units:meter/><Value>3</Value></DefineArg>
<DefineArg Name="PeakChlDeepBnd"><Description>
Deep depth bound for detecting chl peak on each descent or ascent
profile.
<!--debug
</Description><Units:meter/><Value>NaN</Value></DefineArg>
-->
</Description><Units:meter/><Value>8</Value></DefineArg>
<DefineArg Name="FilterWidth"><Description>
Width of boxcar filter used in horizontal patch detection
</Description><Units:count/><Value>4</Value></DefineArg>
<DefineArg Name="BeginThreshold"><Description>
If non-NaN, sets threshold for starting horizontal patch detection
</Description><Units:microgram_per_liter/><Value>NaN</Value></DefineArg>
<DefineArg Name="OffPeakFraction"><Description>
When filtered horizontal value is this fraction of the peak, consider it
outside the patch.
</Description><Units:percent/><Value>80</Value></DefineArg>
<DefineArg Name="PatchMode"><Description>
If true, use center of "in peak" range as the turn-around point. If
false use maximum horizontal peak location as the turn-around point.
</Description><False/></DefineArg>
<!-- Variable Settings for each tracking leg -->
<DefineArg Name="WpBearing"><Description>
Bearing being followed in the current leg. Set this to initialize start
direction of patch tracking.
</Description><Units:degree/><Value>-90</Value></DefineArg>
<DefineOutput Name="PatchDetectOn"><Description>
Mission sets this to true when the patch has been crossed.
</Description><False/></DefineOutput>
<DefineOutput Name="WpDone"><Description>
Mission sets this to true when the cross-patch waypoint has been
reached.
</Description><False/></DefineOutput>
<DefineOutput Name="PatchChl"><Units:microgram_per_liter/><Value>NaN</Value></DefineOutput>
<DefineOutput Name="PatchChlDepth"><Units:meter/><Value>NaN</Value></DefineOutput>
<DefineOutput Name="PatchChlLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>
<DefineOutput Name="PatchChlLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>
<DefineOutput Name="PatchChlDistance"><Units:meter/><Value>0</Value></DefineOutput>
<!-- The timeout -->
<Timeout Duration="MissionTimeout"/>
<!-- And now the mission -->
<Guidance:AltitudeEnvelope>
<Parallel/>
<Setting><Guidance:AltitudeEnvelope.minAltitude/><Arg Name="MinAltitude"/></Setting>
</Guidance:AltitudeEnvelope>
<Guidance:DepthEnvelope>
<Parallel/>
<Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="MaxDepth"/></Setting>
</Guidance:DepthEnvelope>
<Insert Filename="Insert/Surface.xml" Id="SurfaceCommsSplit">
<RedefineArg Name="SurfacePitch"><Units:degree/><Value>20</Value></RedefineArg>
<RedefineArg Name="SurfaceSpeed"><Units:meter_per_second/><Value>1</Value></RedefineArg>
<RedefineArg Name="UnpackSplitAtSurface"><True/></RedefineArg>
</Insert>
<Aggregate Id="SurfaceComms">
<When>
<Called/>
</When>
<Insert Filename="Insert/Surface.xml">
<RedefineArg Name="SurfacePitch"><Units:degree/><Value>20</Value></RedefineArg>
<RedefineArg Name="SurfaceSpeed"><Units:meter_per_second/><Value>1</Value></RedefineArg>
</Insert>
</Aggregate>
<!-- GPS Update. Don't go too long w/o a GPS fix. -->
<Aggregate Id="NeedComms">
<When>
<Universal:platform_pitch_angle/>
<Gt><Units:degree/><Value>0</Value></Gt>
<And><Elapsed><Universal:time_fix/></Elapsed><Gt><Arg Name="NeedCommsTime"/></Gt></And>
<Or><Elapsed><Universal:time_fix/></Elapsed><Gt><Arg Name="NeedCommsTime"/><Add><Units:minute/><Value>10</Value></Add></Gt></Or>
</When>
<Syslog Severity="Important">NeedComms Timeout Surfacing</Syslog>
<Call RefId="SurfaceComms"/>
</Aggregate>
<Guidance:OffshoreEnvelope>
<Parallel/>
<Setting><Guidance:OffshoreEnvelope.minOffshore/><Arg Name="MinOffshore"/></Setting>
</Guidance:OffshoreEnvelope>
<Guidance:WaterDepthEnvelope>
<Parallel/>
<Setting><Guidance:WaterDepthEnvelope.minWaterDepth/><Arg Name="MinWaterDepth"/></Setting>
</Guidance:WaterDepthEnvelope>
<Guidance:Pitch>
<Parallel/>
<Setting><Guidance:Pitch.massPosition/><Arg Name="MassDefault"/></Setting>
</Guidance:Pitch>
<Guidance:Buoyancy>
<Parallel/>
<Setting><Guidance:Buoyancy.position /><Arg Name="BuoyancyNeutral"/></Setting>
</Guidance:Buoyancy>
<!-- If we're executing here or below, lets' get science data! -->
<Insert Filename="Insert/Science_yz.xml">
<RedefineArg Name="PeakDetectChlActive"><True/></RedefineArg>
<RedefineArg Name="PatchTracking"><True/></RedefineArg>
<RedefineArg Name="LowPassWindowLength"><Arg Name="LowPassWindowLen"/></RedefineArg>
<RedefineArg Name="PeakChlShallowBound"><Arg Name="PeakChlShallowBnd"/></RedefineArg>
<RedefineArg Name="PeakChlDeepBound"><Arg Name="PeakChlDeepBnd"/></RedefineArg>
<RedefineArg Name="OffPeakFractionHorizontal"><Arg Name="OffPeakFraction"/></RedefineArg>
</Insert>
<Guidance:SetSpeed>
<Parallel/>
<Setting><Guidance:SetSpeed.speed/><Arg Name="Speed"/></Setting>
</Guidance:SetSpeed>
<Guidance:DepthEnvelope>
<Parallel/>
<Setting><Guidance:DepthEnvelope.minDepth/><Arg Name="YoYoMinDepth"/></Setting>
<Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="YoYoMaxDepth"/></Setting>
<Setting><Guidance:DepthEnvelope.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
<Setting><Guidance:DepthEnvelope.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
</Guidance:DepthEnvelope>
<Guidance:YoYo>
<Parallel/>
<Setting><Guidance:YoYo.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
<Setting><Guidance:YoYo.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
</Guidance:YoYo>
<Aggregate Id="PatchDetectHorizontal">
<Sequence Repeat="Repeat"/>
<Aggregate Id="PatchDetection">
<When>
<Arg Name="PatchDetectOn"/>
</When>
<Trigger:PeakDetectHorizontal Id="PeakDetectHorizontalTrigger">
<Sequence/>
<!--debug
<Break><Arg Name="WpDone"/>
</Break>
-->
<Setting><Trigger:PeakDetectHorizontal.patchTracking/><Units:bool/><Value>1</Value></Setting>
<Setting><Trigger:PeakDetectHorizontal.detectFrom/><Arg Name="Science:PeakChl"/></Setting>
<Setting><Trigger:PeakDetectHorizontal.depthFrom/><Arg Name="Science:PeakChlDepth"/></Setting>
<Setting><Trigger:PeakDetectHorizontal.latitudeFrom/><Arg Name="Science:PeakChlLatitude"/></Setting>
<Setting><Trigger:PeakDetectHorizontal.longitudeFrom/><Arg Name="Science:PeakChlLongitude"/></Setting>
<Setting><Trigger:PeakDetectHorizontal.beginThreshold/><Arg Name="BeginThreshold"/></Setting>
<Setting><Trigger:PeakDetectHorizontal.offPeakFraction/><Arg Name="OffPeakFraction"/></Setting>
<Setting><Trigger:PeakDetectHorizontal.filterWidth/><Arg Name="FilterWidth"/></Setting>
<Setting><Trigger:PeakDetectHorizontal.centerPeak/><Arg Name="PatchMode"/></Setting>
<OutputArg Name="PatchChl"><Trigger:PeakDetectHorizontal.peakDetect/></OutputArg>
<OutputArg Name="PatchChlDepth"><Trigger:PeakDetectHorizontal.peakDepth/></OutputArg>
<OutputArg Name="PatchChlLatitude"><Trigger:PeakDetectHorizontal.peakLatitude/></OutputArg>
<OutputArg Name="PatchChlLongitude"><Trigger:PeakDetectHorizontal.peakLongitude/></OutputArg>
<OutputArg Name="PatchChlDistance"><Trigger:PeakDetectHorizontal.peakDistance/></OutputArg>
</Trigger:PeakDetectHorizontal>
<Syslog Severity="Important">Fell below OffPeakFraction. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Arg Name="PatchChlDepth"/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog>
<SendData Service="Express"><Arg Name="PatchChl"/><Arg Name="PatchChlDepth"/><Arg Name="PatchChlLatitude"/><Arg Name="PatchChlLongitude"/>
</SendData>
<Assign Id="AssignPatchDetectOff"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>
</Aggregate>
<Assign Id="AssignPatchDetectOn"><Sequence/><Arg Name="PatchDetectOn"/><True/></Assign>
<Syslog Severity="Important">Next: bearing for CrossLeg: <Arg Name="WpBearing"/><Units:degree/>. WpMaxDistance = <Arg Name="WpMaxDistance"/><Units:meter/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>.</Syslog>
<Aggregate Id="CrossLeg">
<Description>
This is a long leg across the width of the patch. Also the first
leg in a mission run. Two waypoints run in parallel: a short run
to the surfacing point, and a longer run to the edge of the
patch.
</Description>
<Sequence/>
<Break><Arg Name="WpDone"/>
<Or><Arg Name="PatchDetectOn"/><Eq><False/></Eq></Or>
</Break>
<Guidance:Waypoint Id="CrossSurfaceWp">
<Sequence/>
<Timeout Duration="WpTimeout"/>
<Setting><Guidance:Waypoint.distanceDelta/><Arg Name="PatchChlDistance"/></Setting>
<Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
<Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
</Guidance:Waypoint>
<Call RefId="SurfaceComms"/>
<Guidance:Waypoint Id="CrossPeakWp">
<Sequence/>
<Timeout Duration="WpTimeout"/>
<Setting><Guidance:Waypoint.distanceDelta/><Arg Name="WpMaxDistance"/></Setting>
<Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
<Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
</Guidance:Waypoint>
<!--debug-->
<Syslog Severity="Important">CrossPeakWp done. Lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Arg Name="PatchChlDepth"/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog>
<Assign Id="AssignPatchDetectOffInCrossLeg"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>
<Assign Id="AssignWpDoneInCrossLeg"><Sequence/><Arg Name="WpDone"/><True/></Assign>
</Aggregate>
<Assign Id="AssignWpBearingForInLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Add><Arg Name="Reverse"/></Add><Mod><Arg Name="TwoPi"/>
</Mod></Assign>
<Syslog Severity="Important">Next: bearing for InLeg: <Arg Name="WpBearing"/><Units:degree/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Arg Name="PatchChlDepth"/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog>
<Guidance:Waypoint Id="InLegWp">
<Description>
Simply drive back towards the patch center
</Description>
<Sequence/>
<Timeout Duration="WpTimeout"/>
<Setting><Guidance:Waypoint.distanceDelta/><Arg Name="PatchChlDistance"/></Setting>
<Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
<Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
</Guidance:Waypoint>
<Assign Id="AssignWpBearingForOutLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Sub><Arg Name="Turn"/></Sub><Mod><Arg Name="TwoPi"/>
</Mod></Assign>
<Syslog Severity="Important">Next: bearing for OutLeg: <Arg Name="WpBearing"/><Units:degree/>. WpMaxDistance = <Arg Name="WpMaxDistance"/><Units:meter/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchChl"/><Units:microgram_per_liter/> at lat = <Arg Name="PatchChlLatitude"/><Units:degree/>, lon = <Arg Name="PatchChlLongitude"/><Units:degree/>, dep = <Arg Name="PatchChlDepth"/><Units:meter/>, distance = <Arg Name="PatchChlDistance"/><Units:meter/></Syslog>
<Call RefId="SurfaceCommsSplit"/>
<Assign Id="AssignPatchDetectOnForOutLeg"><Sequence/><Arg Name="PatchDetectOn"/><True/></Assign>
<Aggregate Id="OutLeg">
<Description>
Drive outward until edge of patch is detected.
</Description>
<Sequence/>
<Break><Arg Name="WpDone"/>
<Or><Arg Name="PatchDetectOn"/><Eq><False/></Eq></Or>
</Break>
<Guidance:Waypoint Id="OutLegWp">
<Sequence/>
<Timeout Duration="WpTimeout"/>
<Setting><Guidance:Waypoint.distanceDelta/><Arg Name="WpMaxDistance"/></Setting>
<Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
<Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
</Guidance:Waypoint>
<Assign Id="AssignPatchDetectOffInOutLeg"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>
<Assign Id="AssignWpDoneInOutLeg"><Sequence/><Arg Name="WpDone"/><True/></Assign>
</Aggregate>
<Assign Id="AssignWpBearingForCrossLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Add><Arg Name="Reverse"/></Add><Mod><Arg Name="TwoPi"/>
</Mod></Assign>
</Aggregate>
</Mission>
2018-09-24T18:49:33.456Z,1537814973.456 [CommandLine](IMPORTANT): Loaded ./Missions/Science/trackPatch_yz.xml
2018-09-24T18:49:37.985Z,1537814977.985 [CommandLine](IMPORTANT): got command show variable peakChl
2018-09-24T18:49:38.099Z,1537814978.099 [CommandLine](IMPORTANT): trackPatch.PeakChlShallowBnd (meter)
2018-09-24T18:49:38.100Z,1537814978.100 [CommandLine](IMPORTANT): trackPatch.PeakChlDeepBnd (meter)
2018-09-24T18:49:38.104Z,1537814978.104 [CommandLine](IMPORTANT): trackPatch:Science.PeakChlShallowBound (meter)
2018-09-24T18:49:38.105Z,1537814978.105 [CommandLine](IMPORTANT): trackPatch:Science.PeakChlDeepBound (meter)
2018-09-24T18:49:38.105Z,1537814978.105 [CommandLine](IMPORTANT): trackPatch:Science.PeakChl (microgram_per_liter)
2018-09-24T18:49:38.106Z,1537814978.106 [CommandLine](IMPORTANT): trackPatch:Science.PeakChlDepth (meter)
2018-09-24T18:49:38.106Z,1537814978.106 [CommandLine](IMPORTANT): trackPatch:Science.PeakChlTemperature (celsius)
2018-09-24T18:49:38.107Z,1537814978.107 [CommandLine](IMPORTANT): trackPatch:Science.PeakChlLatitude (degree)
2018-09-24T18:49:38.107Z,1537814978.107 [CommandLine](IMPORTANT): trackPatch:Science.PeakChlLongitude (degree)
2018-09-24T18:49:49.489Z,1537814989.489 [CommandLine](IMPORTANT): got command report touch trackPatch:Science.PeakChl
2018-09-24T18:50:20.258Z,1537815020.258 [CommandLine](IMPORTANT): got command set trackPatch.MissionTimeout 10.000000 minute
2018-09-24T18:51:53.404Z,1537815113.404 [Default:CheckIn:C.Wait](INFO): Done Waiting.
2018-09-24T18:51:53.404Z,1537815113.404 [Default:CheckIn:C.Wait] Stopped
2018-09-24T18:51:53.404Z,1537815113.404 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-24T18:51:53.404Z,1537815113.404 [Default:CheckIn:D] Running Loop=1
2018-09-24T18:51:53.790Z,1537815113.790 [Default:CheckIn:D] Stopped
2018-09-24T18:51:53.790Z,1537815113.790 [Default:CheckIn:E] Running Loop=1
2018-09-24T18:51:54.214Z,1537815114.214 [Default:CheckIn:E](IMPORTANT): Default mission has been running for 28.576750 min
2018-09-24T18:51:54.214Z,1537815114.214 [Default:CheckIn:E] Stopped
2018-09-24T18:51:54.214Z,1537815114.214 [Default:CheckIn](INFO): Completed Default:CheckIn
2018-09-24T18:51:54.214Z,1537815114.214 [Default:CheckIn] Stopped
2018-09-24T18:51:54.214Z,1537815114.214 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-24T18:51:54.214Z,1537815114.214 [Default:CheckIn](INFO): Running loop #4
2018-09-24T18:51:54.215Z,1537815114.215 [Default:CheckIn] Running Loop=4
2018-09-24T18:51:54.215Z,1537815114.215 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-24T18:51:54.215Z,1537815114.215 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-24T18:51:54.942Z,1537815114.942 [NAL9602](INFO): Powering up
2018-09-24T18:52:06.151Z,1537815126.151 [NAL9602](INFO): NAL9602 initialized
2018-09-24T18:52:24.540Z,1537815144.540 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:52:30.548Z,1537815150.548 [NAL9602](INFO): SBD MO Status=0, MOMSN=1576, MT Status=0, MTMSN=0
2018-09-24T18:52:30.548Z,1537815150.548 [NAL9602](INFO): No messages in MT queue
2018-09-24T18:53:00.944Z,1537815180.944 [DataOverHttps](INFO): setting unavailable, lastComms_.elapsed()=180.195190
2018-09-24T18:53:18.562Z,1537815198.562 [NAL9602](INFO): GPS fix at 20180924T185309: (36.850333, -121.929394)
2018-09-24T18:53:18.627Z,1537815198.627 [Default:CheckIn:Read_GPS] Stopped
2018-09-24T18:53:18.627Z,1537815198.627 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-24T18:53:45.881Z,1537815225.881 [NAL9602](INFO): SBD MO Status=1, MOMSN=1577, MT Status=0, MTMSN=0
2018-09-24T18:53:45.933Z,1537815225.933 [NAL9602](INFO): Sent 63 bytes from file Logs/20180924T174057/Courier0027.lzma
2018-09-24T18:53:45.934Z,1537815225.934 [NAL9602](INFO): Packets left to send: 0
2018-09-24T18:53:45.935Z,1537815225.935 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T174057/Courier0027.lzma.parts/0000.sbd
2018-09-24T18:53:45.935Z,1537815225.935 [NAL9602](DEBUG): Completed sending Logs/20180924T174057/Courier0027.lzma
2018-09-24T18:54:05.604Z,1537815245.604 [NAL9602](INFO): SBD MO Status=2, MOMSN=1578, MT Status=2, MTMSN=0
2018-09-24T18:54:05.604Z,1537815245.604 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-24T18:54:24.539Z,1537815264.539 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:54:24.947Z,1537815264.947 [NAL9602](INFO): SBD MO Status=1, MOMSN=1578, MT Status=0, MTMSN=0
2018-09-24T18:54:24.995Z,1537815264.995 [NAL9602](INFO): Sent 332 bytes from file Logs/20180924T174057/Express0028.lzma
2018-09-24T18:54:24.995Z,1537815264.995 [NAL9602](INFO): Packets left to send: 1
2018-09-24T18:54:24.997Z,1537815264.997 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T174057/Express0028.lzma.parts/0001.sbd
2018-09-24T18:54:29.129Z,1537815269.129 [RDI_Pathfinder](ERROR): Failed to parse:
:HM,G,D,0e8d,0fff, 13.710, -0.161, 0.000
2018-09-24T18:54:36.300Z,1537815276.300 [NAL9602](INFO): SBD MO Status=1, MOMSN=1579, MT Status=0, MTMSN=0
2018-09-24T18:54:36.353Z,1537815276.353 [NAL9602](INFO): Sent 88 bytes from file Logs/20180924T174057/Express0028.lzma
2018-09-24T18:54:36.353Z,1537815276.353 [NAL9602](INFO): Packets left to send: 0
2018-09-24T18:54:36.354Z,1537815276.354 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T174057/Express0028.lzma.parts/0000.sbd
2018-09-24T18:54:36.355Z,1537815276.355 [NAL9602](DEBUG): Completed sending Logs/20180924T174057/Express0028.lzma
2018-09-24T18:54:47.100Z,1537815287.100 [NAL9602](INFO): SBD MO Status=0, MOMSN=1580, MT Status=0, MTMSN=0
2018-09-24T18:54:47.210Z,1537815287.210 [Default:CheckIn:Read_Iridium] Stopped
2018-09-24T18:54:47.210Z,1537815287.210 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-24T18:54:47.210Z,1537815287.210 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-24T18:55:17.902Z,1537815317.902 [NAL9602](INFO): Powering down
2018-09-24T18:55:24.693Z,1537815324.693 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:56:25.091Z,1537815385.091 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T18:57:03.605Z,1537815423.605 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.002997
2018-09-24T18:58:07.459Z,1537815487.459 [CommandLine](IMPORTANT): got command failComponent
2018-09-24T18:58:07.461Z,1537815487.461 [CommandLine](IMPORTANT): Failed components:
2018-09-24T18:58:07.461Z,1537815487.461 [CommandLine](IMPORTANT): No failed Components.
2018-09-24T18:59:47.900Z,1537815587.900 [Default:CheckIn:C.Wait](INFO): Done Waiting.
2018-09-24T18:59:47.900Z,1537815587.900 [Default:CheckIn:C.Wait] Stopped
2018-09-24T18:59:47.900Z,1537815587.900 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-24T18:59:47.900Z,1537815587.900 [Default:CheckIn:D] Running Loop=1
2018-09-24T18:59:48.264Z,1537815588.264 [Default:CheckIn:D] Stopped
2018-09-24T18:59:48.264Z,1537815588.264 [Default:CheckIn:E] Running Loop=1
2018-09-24T18:59:48.668Z,1537815588.668 [Default:CheckIn:E](IMPORTANT): Default mission has been running for 36.484639 min
2018-09-24T18:59:48.669Z,1537815588.669 [Default:CheckIn:E] Stopped
2018-09-24T18:59:48.669Z,1537815588.669 [Default:CheckIn](INFO): Completed Default:CheckIn
2018-09-24T18:59:48.669Z,1537815588.669 [Default:CheckIn] Stopped
2018-09-24T18:59:48.669Z,1537815588.669 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-24T18:59:48.670Z,1537815588.670 [Default:CheckIn](INFO): Running loop #5
2018-09-24T18:59:48.670Z,1537815588.670 [Default:CheckIn] Running Loop=5
2018-09-24T18:59:48.670Z,1537815588.670 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-24T18:59:48.670Z,1537815588.670 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-24T18:59:49.426Z,1537815589.426 [NAL9602](INFO): Powering up
2018-09-24T19:00:01.347Z,1537815601.347 [NAL9602](INFO): NAL9602 initialized
2018-09-24T19:00:22.546Z,1537815622.546 [NAL9602](IMPORTANT): SBD MO Status=0, MOMSN=1581, MT Status=1, MTMSN=79
2018-09-24T19:00:22.546Z,1537815622.546 [NAL9602](INFO): Data available in MT queue
2018-09-24T19:00:23.246Z,1537815623.246 [NAL9602](INFO): Received command:load Science/sci2.xml;set sci2.MissionTimeout 1 hour;set sci2.NeedCommsTime 20 minute;set sci2.Lat1 36.844 degree;set sci2.Lon1 -121.888 angular_degree;set sci2.YoYoMaxDepth 20 meter;set sci2.MaxDepth 25 meter;run
2018-09-24T19:00:23.257Z,1537815623.257 [CommandLine](IMPORTANT): got command load ./Missions/Science/sci2.xml
2018-09-24T19:00:23.257Z,1537815623.257 [MissionManager](INFO): Uninitializing Mission trackPatch
2018-09-24T19:00:23.339Z,1537815623.339 [MissionManager](INFO): Loading Mission: ./Missions/Science/sci2.xml
2018-09-24T19:00:23.504Z,1537815623.504 [MissionManager](INFO): DefineArg sci2.MissionTimeout = 2.000000 h
2018-09-24T19:00:23.507Z,1537815623.507 [MissionManager](INFO): DefineArg sci2.NeedCommsTime = 60.000000 min
2018-09-24T19:00:23.510Z,1537815623.510 [MissionManager](INFO): DefineArg sci2.Repeat = 1.000000 count
2018-09-24T19:00:23.513Z,1537815623.513 [MissionManager](INFO): DefineArg sci2.Lat1 = nan arcdeg
2018-09-24T19:00:23.516Z,1537815623.516 [MissionManager](INFO): DefineArg sci2.Lon1 = nan arcdeg
2018-09-24T19:00:23.519Z,1537815623.519 [MissionManager](INFO): DefineArg sci2.Lat2 = nan arcdeg
2018-09-24T19:00:23.522Z,1537815623.522 [MissionManager](INFO): DefineArg sci2.Lon2 = nan arcdeg
2018-09-24T19:00:23.525Z,1537815623.525 [MissionManager](INFO): DefineArg sci2.Lat3 = nan arcdeg
2018-09-24T19:00:23.528Z,1537815623.528 [MissionManager](INFO): DefineArg sci2.Lon3 = nan arcdeg
2018-09-24T19:00:23.531Z,1537815623.531 [MissionManager](INFO): DefineArg sci2.Lat4 = nan arcdeg
2018-09-24T19:00:23.533Z,1537815623.533 [MissionManager](INFO): DefineArg sci2.Lon4 = nan arcdeg
2018-09-24T19:00:23.536Z,1537815623.536 [MissionManager](INFO): DefineArg sci2.Lat5 = nan arcdeg
2018-09-24T19:00:23.577Z,1537815623.577 [MissionManager](INFO): DefineArg sci2.Lon5 = nan arcdeg
2018-09-24T19:00:23.580Z,1537815623.580 [MissionManager](INFO): DefineArg sci2.Lat6 = nan arcdeg
2018-09-24T19:00:23.583Z,1537815623.583 [MissionManager](INFO): DefineArg sci2.Lon6 = nan arcdeg
2018-09-24T19:00:23.629Z,1537815623.629 [MissionManager](INFO): DefineArg sci2.Lat7 = nan arcdeg
2018-09-24T19:00:23.632Z,1537815623.632 [MissionManager](INFO): DefineArg sci2.Lon7 = nan arcdeg
2018-09-24T19:00:23.635Z,1537815623.635 [MissionManager](INFO): DefineArg sci2.Speed = 1.000000 m/s
2018-09-24T19:00:23.648Z,1537815623.648 [MissionManager](INFO): DefineArg sci2.YoYoMinDepth = 2.000000 m
2018-09-24T19:00:23.662Z,1537815623.662 [MissionManager](INFO): DefineArg sci2.YoYoMaxDepth = 200.000000 m
2018-09-24T19:00:23.665Z,1537815623.665 [MissionManager](INFO): DefineArg sci2.YoYoMinAltitude = 9.000000 m
2018-09-24T19:00:23.668Z,1537815623.668 [MissionManager](INFO): DefineArg sci2.YoYoUpPitch = 20.000000 arcdeg
2018-09-24T19:00:23.684Z,1537815623.684 [MissionManager](INFO): DefineArg sci2.YoYoDownPitch = -20.000000 arcdeg
2018-09-24T19:00:23.687Z,1537815623.687 [MissionManager](INFO): DefineArg sci2.BuoyancyNeutral = 205.000004 cc
2018-09-24T19:00:23.691Z,1537815623.691 [MissionManager](INFO): DefineArg sci2.MassDefault = 0.000000 cm
2018-09-24T19:00:23.715Z,1537815623.715 [MissionManager](INFO): DefineArg sci2.MinAltitude = 5.000000 m
2018-09-24T19:00:23.718Z,1537815623.718 [MissionManager](INFO): DefineArg sci2.MaxDepth = 205.000000 m
2018-09-24T19:00:23.721Z,1537815623.721 [MissionManager](INFO): DefineArg sci2.MinOffshore = 2.000000 km
2018-09-24T19:00:23.722Z,1537815623.722 [MissionManager](INFO): Inserting Stack: Missions/Insert/Science.xml
2018-09-24T19:00:24.076Z,1537815624.076 [MissionManager](INFO): DefineArg sci2:Science.SampleISUS = 0 bool
2018-09-24T19:00:24.083Z,1537815624.083 [MissionManager](INFO): DefineArg sci2:Science.SampleISUSmaxPitch = 60.000000 arcdeg
2018-09-24T19:00:24.096Z,1537815624.096 [MissionManager](INFO): DefineArg sci2:Science.SampleISUSminPitch = -60.000000 arcdeg
2018-09-24T19:00:24.107Z,1537815624.107 [MissionManager](INFO): DefineArg sci2:Science.PeakDetectChlActive = 0 bool
2018-09-24T19:00:24.110Z,1537815624.110 [MissionManager](INFO): DefineArg sci2:Science.HighestChlPeakReportActive = 0 bool
2018-09-24T19:00:24.117Z,1537815624.117 [MissionManager](INFO): DefineArg sci2:Science.PatchTracking = 0 bool
2018-09-24T19:00:24.120Z,1537815624.120 [MissionManager](INFO): DefineArg sci2:Science.FilterWidthHorizontal = 3.000000 count
2018-09-24T19:00:24.141Z,1537815624.141 [MissionManager](INFO): DefineArg sci2:Science.NumProfilesSlidingwindow = 100.000000 count
2018-09-24T19:00:24.149Z,1537815624.149 [MissionManager](INFO): DefineArg sci2:Science.PeakDetectNO3Active = 0 bool
2018-09-24T19:00:24.165Z,1537815624.165 [MissionManager](INFO): DefineArg sci2:Science.PeakDetectOilActive = 0 bool
2018-09-24T19:00:24.184Z,1537815624.184 [MissionManager](INFO): DefineArg sci2:Science.UpwardDerivativeOfTemperatureActive = 0 bool
2018-09-24T19:00:24.196Z,1537815624.196 [MissionManager](INFO): DefineArg sci2:Science.EnabledAanderaaO2 = 0.000000 bool
2018-09-24T19:00:24.200Z,1537815624.200 [MissionManager](INFO): DefineArg sci2:Science.EnabledNeilBrown = 0.000000 bool
2018-09-24T19:00:24.217Z,1537815624.217 [MissionManager](INFO): DefineArg sci2:Science.EnabledSeabird = 0.000000 bool
2018-09-24T19:00:24.220Z,1537815624.220 [MissionManager](INFO): DefineArg sci2:Science.EnabledTurbulence_NPS = 0.000000 bool
2018-09-24T19:00:24.224Z,1537815624.224 [MissionManager](INFO): DefineArg sci2:Science.EnabledWetLabsBB2FL = 0.000000 bool
2018-09-24T19:00:24.228Z,1537815624.228 [MissionManager](INFO): DefineArg sci2:Science.EnabledWetLabsSeaOWL_UV_A = 1.000000 bool
2018-09-24T19:00:24.239Z,1537815624.239 [MissionManager](INFO): DefineArg sci2:Science.EnabledISUS = 0.000000 bool
2018-09-24T19:00:24.250Z,1537815624.250 [MissionManager](INFO): DefineArg sci2:Science.LowPassWindowLength = 20.000000 count
2018-09-24T19:00:24.253Z,1537815624.253 [MissionManager](INFO): DefineArg sci2:Science.PeakChlShallowBound = nan m
2018-09-24T19:00:24.256Z,1537815624.256 [MissionManager](INFO): DefineArg sci2:Science.PeakChlDeepBound = nan m
2018-09-24T19:00:24.295Z,1537815624.295 [MissionManager](INFO): DefineOutput sci2:Science.PeakChl = 0.000000 ug/l
2018-09-24T19:00:24.298Z,1537815624.298 [MissionManager](INFO): DefineOutput sci2:Science.PeakChlDepth = 0.000000 m
2018-09-24T19:00:24.301Z,1537815624.301 [MissionManager](INFO): DefineOutput sci2:Science.PeakChlTemperature = 0.000000 degC
2018-09-24T19:00:24.304Z,1537815624.304 [MissionManager](INFO): DefineOutput sci2:Science.PeakChlLatitude = nan arcdeg
2018-09-24T19:00:24.320Z,1537815624.320 [MissionManager](INFO): DefineOutput sci2:Science.PeakChlLongitude = nan arcdeg
2018-09-24T19:00:24.323Z,1537815624.323 [MissionManager](INFO): DefineOutput sci2:Science.PeakNO3 = 0.000000 umol/l
2018-09-24T19:00:24.326Z,1537815624.326 [MissionManager](INFO): DefineOutput sci2:Science.PeakNO3Depth = 0.000000 m
2018-09-24T19:00:24.353Z,1537815624.353 [MissionManager](INFO): DefineOutput sci2:Science.PeakNO3Latitude = nan arcdeg
2018-09-24T19:00:24.356Z,1537815624.356 [MissionManager](INFO): DefineOutput sci2:Science.PeakNO3Longitude = nan arcdeg
2018-09-24T19:00:24.360Z,1537815624.360 [MissionManager](INFO): DefineOutput sci2:Science.PatchChl = 0.000000 m
2018-09-24T19:00:24.363Z,1537815624.363 [MissionManager](INFO): DefineOutput sci2:Science.PatchChlDepth = 0.000000 m
2018-09-24T19:00:24.372Z,1537815624.372 [MissionManager](INFO): DefineOutput sci2:Science.PatchChlLatitude = nan arcdeg
2018-09-24T19:00:24.375Z,1537815624.375 [MissionManager](INFO): DefineOutput sci2:Science.PatchChlLongitude = nan arcdeg
2018-09-24T19:00:24.378Z,1537815624.378 [MissionManager](INFO): DefineOutput sci2:Science.PatchChlDistance = nan m
2018-09-24T19:00:24.396Z,1537815624.396 [MissionManager](INFO): DefineOutput sci2:Science.PeakOil = 0.000000 kg/m3
2018-09-24T19:00:24.399Z,1537815624.399 [MissionManager](INFO): DefineOutput sci2:Science.PeakOilDepth = 0.000000 m
2018-09-24T19:00:24.402Z,1537815624.402 [MissionManager](INFO): DefineOutput sci2:Science.PeakOilLatitude = nan arcdeg
2018-09-24T19:00:24.421Z,1537815624.421 [MissionManager](INFO): DefineOutput sci2:Science.PeakOilLongitude = nan arcdeg
2018-09-24T19:00:24.462Z,1537815624.462 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-24T19:00:24.485Z,1537815624.485 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-24T19:00:24.519Z,1537815624.519 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-24T19:00:24.539Z,1537815624.539 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-24T19:00:24.548Z,1537815624.548 [MissionManager](INFO): RedefineArg sci2:Science.SampleISUS = value:1 bool
2018-09-24T19:00:24.571Z,1537815624.571 [MissionManager](INFO): RedefineArg sci2:Science.PeakDetectChlActive = value:1 bool
2018-09-24T19:00:24.572Z,1537815624.572 [MissionManager](INFO): Inserting Stack: Missions/Insert/NeedComms.xml
2018-09-24T19:00:24.649Z,1537815624.649 [MissionManager](INFO): DefineArg sci2:NeedComms.DiveInterval = 3.000000 h
2018-09-24T19:00:24.652Z,1537815624.652 [MissionManager](INFO): DefineArg sci2:NeedComms.WaitForPitchUp = 10.000000 min
2018-09-24T19:00:24.687Z,1537815624.687 [MissionManager](INFO): DefineArg sci2:NeedComms.SurfacePitch = 20.000000 arcdeg
2018-09-24T19:00:24.690Z,1537815624.690 [MissionManager](INFO): DefineArg sci2:NeedComms.SurfaceDepthRate = nan m/s
2018-09-24T19:00:24.693Z,1537815624.693 [MissionManager](INFO): DefineArg sci2:NeedComms.SurfaceSpeed = 1.000000 m/s
2018-09-24T19:00:24.696Z,1537815624.696 [MissionManager](INFO): DefineArg sci2:NeedComms.GPSTimeout = 7.000000 min
2018-09-24T19:00:24.711Z,1537815624.711 [MissionManager](INFO): DefineArg sci2:NeedComms.CommsTimeout = 30.000000 min
2018-09-24T19:00:24.717Z,1537815624.717 [sci2:NeedComms:B.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-24T19:00:24.753Z,1537815624.753 [MissionManager](INFO): Inserting Stack: Missions/Insert/StandardEnvelopes.xml
2018-09-24T19:00:24.850Z,1537815624.850 [MissionManager](INFO): DefineArg sci2:StandardEnvelopes.MinAltitude = 5.000000 m
2018-09-24T19:00:24.882Z,1537815624.882 [MissionManager](INFO): DefineArg sci2:StandardEnvelopes.MaxDepth = 200.000000 m
2018-09-24T19:00:24.886Z,1537815624.886 [MissionManager](INFO): DefineArg sci2:StandardEnvelopes.MinOffshore = 2000.000000 m
2018-09-24T19:00:24.887Z,1537815624.887 [sci2:StandardEnvelopes:A.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-24T19:00:24.914Z,1537815624.914 [sci2:StandardEnvelopes:B.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-24T19:00:24.922Z,1537815624.922 [sci2:StandardEnvelopes:C.OffshoreEnvelope](DEBUG): Construct OffshoreEnvelope.
2018-09-24T19:00:24.972Z,1537815624.972 [sci2:I.Pitch](DEBUG): Construct.
2018-09-24T19:00:24.977Z,1537815624.977 [sci2:J.Buoyancy](DEBUG): Construct Buoyancy.
2018-09-24T19:00:24.980Z,1537815624.980 [sci2:K.SetSpeed](DEBUG): Construct.
2018-09-24T19:00:24.995Z,1537815624.995 [sci2:L.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-24T19:00:25.027Z,1537815625.027 [sci2:M.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-24T19:00:25.034Z,1537815625.034 [sci2:N.YoYo](DEBUG): Construct YoYo.
2018-09-24T19:00:25.055Z,1537815625.055 [sci2:Lap:Wpt1:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-24T19:00:25.083Z,1537815625.083 [sci2:Lap:Wpt2:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-24T19:00:25.090Z,1537815625.090 [sci2:Lap:Wpt3:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-24T19:00:25.108Z,1537815625.108 [sci2:Lap:Wpt4:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-24T19:00:25.114Z,1537815625.114 [sci2:Lap:Wpt5:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-24T19:00:25.142Z,1537815625.142 [sci2:Lap:Wpt6:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-24T19:00:25.148Z,1537815625.148 [sci2:Lap:Wpt7:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-24T19:00:25.232Z,1537815625.232 [MissionManager](DEBUG):
<?xml version="1.0" encoding="UTF-8"?>
<!-- ====================
Generated by TethysL
==================== -->
<Mission xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xmlns="Tethys"
xmlns:Units="Tethys/Units"
xmlns:Control="Tethys/Control"
xmlns:Guidance="Tethys/Guidance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd"
Id="sci2">
<Description>
Vehicle yo-yo's to the specified waypoints, with science turned on.
</Description>
<DefineArg Name="MissionTimeout"><Description>
Maximum duration of mission
</Description><Units:hour/><Value>2</Value></DefineArg>
<DefineArg Name="NeedCommsTime"><Description>
How often to surface for commumications
</Description><Units:minute/><Value>60</Value></DefineArg>
<DefineArg Name="Repeat"><Description>
Number of times the vehicle should try to cycle through waypoints..
</Description><Units:count/><Value>1</Value></DefineArg>
<DefineArg Name="Lat1"><Description>
Latitude of waypoint 1. If nan, waypoint is skipped.
</Description><Units:degree/><Value>NaN</Value></DefineArg>
<DefineArg Name="Lon1"><Description>
Longitude of waypoint 1. If nan, waypoint is skipped.
</Description><Units:degree/><Value>NaN</Value></DefineArg>
<DefineArg Name="Lat2"><Description>
Latitude of waypoint 2. If nan, waypoint is skipped.
</Description><Units:degree/><Value>NaN</Value></DefineArg>
<DefineArg Name="Lon2"><Description>
Longitude of waypoint 2. If nan, waypoint is skipped.
</Description><Units:degree/><Value>NaN</Value></DefineArg>
<DefineArg Name="Lat3"><Description>
Latitude of waypoint 3. If nan, waypoint is skipped.
</Description><Units:degree/><Value>NaN</Value></DefineArg>
<DefineArg Name="Lon3"><Description>
Longitude of waypoint 3. If nan, waypoint is skipped.
</Description><Units:degree/><Value>NaN</Value></DefineArg>
<DefineArg Name="Lat4"><Description>
Latitude of waypoint 4. If nan, waypoint is skipped.
</Description><Units:degree/><Value>NaN</Value></DefineArg>
<DefineArg Name="Lon4"><Description>
Longitude of waypoint 4. If nan, waypoint is skipped.
</Description><Units:degree/><Value>NaN</Value></DefineArg>
<DefineArg Name="Lat5"><Description>
Latitude of waypoint 5. If nan, waypoint is skipped.
</Description><Units:degree/><Value>NaN</Value></DefineArg>
<DefineArg Name="Lon5"><Description>
Longitude of waypoint 5. If nan, waypoint is skipped.
</Description><Units:degree/><Value>NaN</Value></DefineArg>
<DefineArg Name="Lat6"><Description>
Latitude of waypoint 6. If nan, waypoint is skipped.
</Description><Units:degree/><Value>NaN</Value></DefineArg>
<DefineArg Name="Lon6"><Description>
Longitude of waypoint 6. If nan, waypoint is skipped.
</Description><Units:degree/><Value>NaN</Value></DefineArg>
<DefineArg Name="Lat7"><Description>
Latitude of waypoint 7. If nan, waypoint is skipped.
</Description><Units:degree/><Value>NaN</Value></DefineArg>
<DefineArg Name="Lon7"><Description>
Longitude of waypoint 7. If nan, waypoint is skipped.
</Description><Units:degree/><Value>NaN</Value></DefineArg>
<DefineArg Name="Speed"><Description>
Speed while performing the YoYo behavior.
</Description><Units:meter_per_second/><Value>1</Value></DefineArg>
<DefineArg Name="YoYoMinDepth"><Description>
Minimum depth while performing the YoYo behavior.
</Description><Units:meter/><Value>2</Value></DefineArg>
<DefineArg Name="YoYoMaxDepth"><Description>
Maximum depth while performing the YoYo behavior.
</Description><Units:meter/><Value>200</Value></DefineArg>
<DefineArg Name="YoYoMinAltitude"><Description>
Minimum altitude while performing the YoYo behavior (for
bottom-terminated YoYos).
</Description><Units:meter/><Value>9</Value></DefineArg>
<DefineArg Name="YoYoUpPitch"><Description>
Vehicle up pitch while performing the YoYo behavior.
</Description><Units:degree/><Value>20</Value></DefineArg>
<DefineArg Name="YoYoDownPitch"><Description>
Vehicle down pitch while performing the YoYo behavior.
</Description><Units:degree/><Value>-20</Value></DefineArg>
<DefineArg Name="BuoyancyNeutral"><Description>
Buoyancy bladder position while performing the YoYo behavior. Defaults
to buoyancyNeutral setting in the Config/Control.cfg file. Set to NaN cc
for active buoyancy
</Description><Control:VerticalControl.buoyancyNeutral/></DefineArg>
<DefineArg Name="MassDefault"><Description>
Static setting for mass during the mission. Set to NaN mm for active
mass position
</Description><Control:VerticalControl.massDefault/></DefineArg>
<DefineArg Name="MinAltitude"><Description>
Minimum height above the sea floor for the entire mission.
</Description><Units:meter/><Value>5</Value></DefineArg>
<DefineArg Name="MaxDepth"><Description>
Maximum depth for the entire mission.
</Description><Units:meter/><Value>205</Value></DefineArg>
<DefineArg Name="MinOffshore"><Description>
Minimum offshore distance for the entire mission.
</Description><Units:kilometer/><Value>2</Value></DefineArg>
<Timeout Duration="MissionTimeout"/>
<Insert Filename="Insert/Science.xml">
<Description>
Most missions will run the science sensors. If you don't place this
aggregate above NeedComms, science instruments get turned off on the
last upcast and while floating on the surface.
</Description>
<RedefineArg Name="SampleISUS"><True/></RedefineArg>
<RedefineArg Name="PeakDetectChlActive"><True/></RedefineArg>
</Insert>
<Insert Filename="Insert/NeedComms.xml" Id="NeedComms"/>
<Assign><Sequence/><Arg Name="NeedComms:DiveInterval"/><Arg Name="NeedCommsTime"/></Assign>
<Insert Filename="Insert/StandardEnvelopes.xml"/>
<Assign><Sequence/><Arg Name="StandardEnvelopes:MinAltitude"/><Arg Name="MinAltitude"/></Assign>
<Assign><Sequence/><Arg Name="StandardEnvelopes:MaxDepth"/><Arg Name="MaxDepth"/></Assign>
<Assign><Sequence/><Arg Name="StandardEnvelopes:MinOffshore"/><Arg Name="MinOffshore"/></Assign>
<Call Id="StartingMission" RefId="NeedComms"/>
<Guidance:Pitch>
<Parallel/>
<Setting><Guidance:Pitch.massPosition/><Arg Name="MassDefault"/></Setting>
</Guidance:Pitch>
<Guidance:Buoyancy>
<Parallel/>
<Setting><Guidance:Buoyancy.position/><Arg Name="BuoyancyNeutral"/></Setting>
</Guidance:Buoyancy>
<Guidance:SetSpeed>
<Parallel/>
<Setting><Guidance:SetSpeed.speed/><Arg Name="Speed"/></Setting>
</Guidance:SetSpeed>
<Guidance:DepthEnvelope>
<Description>
Another depth envelope for the YoYo behavior. This envelope should
fall within the limits of the standard safety envelopes in
Insert/StandardEnvelopes.xml in order to avoid commanding high pitch
angles for depth-terminated YoYos.
</Description>
<Parallel/>
<Setting><Guidance:DepthEnvelope.minDepth/><Arg Name="YoYoMinDepth"/></Setting>
<Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="YoYoMaxDepth"/></Setting>
<Setting><Guidance:DepthEnvelope.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
<Setting><Guidance:DepthEnvelope.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
</Guidance:DepthEnvelope>
<Guidance:AltitudeEnvelope>
<Description>
Another altitude envelope for the YoYo behavior. This envelope
should fall within the limits of the standard safety envelopes in
Insert/StandardEnvelopes.xml in order to avoid commanding high pitch
angles for bottom-terminated YoYos.
</Description>
<Parallel/>
<Setting><Guidance:AltitudeEnvelope.minAltitude/><Arg Name="YoYoMinAltitude"/></Setting>
<Setting><Guidance:AltitudeEnvelope.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
</Guidance:AltitudeEnvelope>
<Guidance:YoYo>
<Parallel/>
<Setting><Guidance:YoYo.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
<Setting><Guidance:YoYo.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
</Guidance:YoYo>
<Aggregate Id="Lap">
<Sequence Repeat="Repeat"/>
<Aggregate Id="Wpt1">
<Sequence/>
<Guidance:Waypoint>
<Sequence/>
<Setting><Guidance:Waypoint.latitude/><Arg Name="Lat1"/></Setting>
<Setting><Guidance:Waypoint.longitude/><Arg Name="Lon1"/></Setting>
</Guidance:Waypoint>
</Aggregate>
<Aggregate Id="Wpt2">
<Sequence/>
<Guidance:Waypoint>
<Sequence/>
<Setting><Guidance:Waypoint.latitude/><Arg Name="Lat2"/></Setting>
<Setting><Guidance:Waypoint.longitude/><Arg Name="Lon2"/></Setting>
</Guidance:Waypoint>
</Aggregate>
<Aggregate Id="Wpt3">
<Sequence/>
<Guidance:Waypoint>
<Sequence/>
<Setting><Guidance:Waypoint.latitude/><Arg Name="Lat3"/></Setting>
<Setting><Guidance:Waypoint.longitude/><Arg Name="Lon3"/></Setting>
</Guidance:Waypoint>
</Aggregate>
<Aggregate Id="Wpt4">
<Sequence/>
<Guidance:Waypoint>
<Sequence/>
<Setting><Guidance:Waypoint.latitude/><Arg Name="Lat4"/></Setting>
<Setting><Guidance:Waypoint.longitude/><Arg Name="Lon4"/></Setting>
</Guidance:Waypoint>
</Aggregate>
<Aggregate Id="Wpt5">
<Sequence/>
<Guidance:Waypoint>
<Sequence/>
<Setting><Guidance:Waypoint.latitude/><Arg Name="Lat5"/></Setting>
<Setting><Guidance:Waypoint.longitude/><Arg Name="Lon5"/></Setting>
</Guidance:Waypoint>
</Aggregate>
<Aggregate Id="Wpt6">
<Sequence/>
<Guidance:Waypoint>
<Sequence/>
<Setting><Guidance:Waypoint.latitude/><Arg Name="Lat6"/></Setting>
<Setting><Guidance:Waypoint.longitude/><Arg Name="Lon6"/></Setting>
</Guidance:Waypoint>
</Aggregate>
<Aggregate Id="Wpt7">
<Sequence/>
<Guidance:Waypoint>
<Sequence/>
<Setting><Guidance:Waypoint.latitude/><Arg Name="Lat7"/></Setting>
<Setting><Guidance:Waypoint.longitude/><Arg Name="Lon7"/></Setting>
</Guidance:Waypoint>
</Aggregate>
</Aggregate>
</Mission>
2018-09-24T19:00:25.233Z,1537815625.233 [CommandLine](IMPORTANT): Loaded ./Missions/Science/sci2.xml
2018-09-24T19:00:33.829Z,1537815633.829 [CommandLine](IMPORTANT): got command set sci2.MissionTimeout 1.000000 hour
2018-09-24T19:00:33.830Z,1537815633.830 [CommandLine](IMPORTANT): got command set sci2.NeedCommsTime 20.000000 minute
2018-09-24T19:00:33.831Z,1537815633.831 [CommandLine](IMPORTANT): got command set sci2.Lat1 36.844002 degree
2018-09-24T19:00:33.832Z,1537815633.832 [CommandLine](IMPORTANT): got command set sci2.Lon1 -121.888000 angular_degree
2018-09-24T19:00:33.833Z,1537815633.833 [CommandLine](IMPORTANT): got command set sci2.YoYoMaxDepth 20.000000 meter
2018-09-24T19:00:33.834Z,1537815633.834 [CommandLine](IMPORTANT): got command set sci2.MaxDepth 25.000000 meter
2018-09-24T19:00:33.834Z,1537815633.834 [CommandLine](IMPORTANT): got command run
2018-09-24T19:00:33.844Z,1537815633.844 [CommandLine](IMPORTANT): Running
2018-09-24T19:00:33.863Z,1537815633.863 [RDI_Pathfinder](ERROR): No DVL communication! Re-initializing
2018-09-24T19:00:33.863Z,1537815633.863 [RDI_Pathfinder] Communications Fault, FailCount= 1
2018-09-24T19:00:33.863Z,1537815633.863 [RDI_Pathfinder](ERROR): Communications Fault
2018-09-24T19:00:33.924Z,1537815633.924 [Default] Stopped
2018-09-24T19:00:33.924Z,1537815633.924 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-24T19:00:33.925Z,1537815633.925 [Default:B.GoToSurface] Stopped
2018-09-24T19:00:33.929Z,1537815633.929 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-24T19:00:33.929Z,1537815633.929 [Default:CheckIn] Stopped
2018-09-24T19:00:33.929Z,1537815633.929 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-24T19:00:33.929Z,1537815633.929 [Default:CheckIn:Read_GPS] Stopped
2018-09-24T19:00:33.929Z,1537815633.929 [MissionManager](IMPORTANT): Started mission sci2
2018-09-24T19:00:33.930Z,1537815633.930 [sci2] Running Loop=1
2018-09-24T19:00:33.930Z,1537815633.930 [sci2](DEBUG): Aggregate::initialize sci2
2018-09-24T19:00:33.930Z,1537815633.930 [sci2:Science] Running Loop=1
2018-09-24T19:00:33.930Z,1537815633.930 [sci2:Science](DEBUG): Aggregate::initialize sci2:Science
2018-09-24T19:00:33.930Z,1537815633.930 [sci2:Science:A] Running Loop=1
2018-09-24T19:00:33.930Z,1537815633.930 [sci2:Science:B] Running Loop=1
2018-09-24T19:00:33.930Z,1537815633.930 [sci2:Science:C] Running Loop=1
2018-09-24T19:00:33.930Z,1537815633.930 [sci2:Science:D] Running Loop=1
2018-09-24T19:00:33.931Z,1537815633.931 [sci2:Science:E] Running Loop=1
2018-09-24T19:00:33.931Z,1537815633.931 [sci2:Science:F] Running Loop=1
2018-09-24T19:00:33.931Z,1537815633.931 [sci2:Science:G] Running Loop=1
2018-09-24T19:00:33.931Z,1537815633.931 [sci2:Science:Read_Oil] Running Loop=1
2018-09-24T19:00:33.931Z,1537815633.931 [sci2:Science:PeakDetectChl] Running Loop=1
2018-09-24T19:00:33.931Z,1537815633.931 [sci2:Science:PeakDetectChl](DEBUG): Aggregate::initialize sci2:Science:PeakDetectChl
2018-09-24T19:00:33.931Z,1537815633.931 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2018-09-24T19:00:33.931Z,1537815633.931 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-24T19:00:33.952Z,1537815633.952 [sci2:Science:HighestChlPeakReport] Running Loop=1
2018-09-24T19:00:33.952Z,1537815633.952 [sci2:Science:HighestChlPeakReport](DEBUG): Aggregate::initialize sci2:Science:HighestChlPeakReport
2018-09-24T19:00:33.952Z,1537815633.952 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2018-09-24T19:00:33.952Z,1537815633.952 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2018-09-24T19:00:33.952Z,1537815633.952 [sci2:Science:PeakDetectNO3] Running Loop=1
2018-09-24T19:00:33.953Z,1537815633.953 [sci2:Science:PeakDetectNO3](DEBUG): Aggregate::initialize sci2:Science:PeakDetectNO3
2018-09-24T19:00:33.953Z,1537815633.953 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2018-09-24T19:00:33.953Z,1537815633.953 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-24T19:00:33.954Z,1537815633.954 [sci2:Science:PeakDetectOil] Running Loop=1
2018-09-24T19:00:33.954Z,1537815633.954 [sci2:Science:PeakDetectOil](DEBUG): Aggregate::initialize sci2:Science:PeakDetectOil
2018-09-24T19:00:33.955Z,1537815633.955 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2018-09-24T19:00:33.955Z,1537815633.955 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-24T19:00:33.956Z,1537815633.956 [sci2:StandardEnvelopes] Running Loop=1
2018-09-24T19:00:33.956Z,1537815633.956 [sci2:StandardEnvelopes](DEBUG): Aggregate::initialize sci2:StandardEnvelopes
2018-09-24T19:00:33.956Z,1537815633.956 [sci2:StandardEnvelopes:A.AltitudeEnvelope] Running Loop=1
2018-09-24T19:00:33.956Z,1537815633.956 [sci2:StandardEnvelopes:A.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-24T19:00:33.957Z,1537815633.957 [sci2:StandardEnvelopes:B.DepthEnvelope] Running Loop=1
2018-09-24T19:00:33.957Z,1537815633.957 [sci2:StandardEnvelopes:B.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-24T19:00:33.957Z,1537815633.957 [sci2:StandardEnvelopes:C.OffshoreEnvelope] Running Loop=1
2018-09-24T19:00:33.957Z,1537815633.957 [sci2:StandardEnvelopes:C.OffshoreEnvelope](DEBUG): Initialize OffshoreEnvelopeComponent.
2018-09-24T19:00:33.957Z,1537815633.957 [sci2:I.Pitch] Running Loop=1
2018-09-24T19:00:33.957Z,1537815633.957 [sci2:I.Pitch](DEBUG): Initialize.
2018-09-24T19:00:33.957Z,1537815633.957 [sci2:J.Buoyancy] Running Loop=1
2018-09-24T19:00:33.958Z,1537815633.958 [sci2:J.Buoyancy](DEBUG): Initialize Buoyancy Component.
2018-09-24T19:00:33.958Z,1537815633.958 [sci2:K.SetSpeed] Running Loop=1
2018-09-24T19:00:33.958Z,1537815633.958 [sci2:K.SetSpeed](DEBUG): Initialize.
2018-09-24T19:00:33.958Z,1537815633.958 [sci2:L.DepthEnvelope] Running Loop=1
2018-09-24T19:00:33.958Z,1537815633.958 [sci2:L.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-24T19:00:33.958Z,1537815633.958 [sci2:M.AltitudeEnvelope] Running Loop=1
2018-09-24T19:00:33.958Z,1537815633.958 [sci2:M.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-24T19:00:33.959Z,1537815633.959 [sci2:N.YoYo] Running Loop=1
2018-09-24T19:00:33.959Z,1537815633.959 [sci2:N.YoYo](DEBUG): Initialize YoYoComponent.
2018-09-24T19:00:33.959Z,1537815633.959 [sci2:C] Running Loop=1
2018-09-24T19:00:33.960Z,1537815633.960 [sci2:N.YoYo] Running Loop=1
2018-09-24T19:00:33.991Z,1537815633.991 [sci2:M.AltitudeEnvelope] Running Loop=1
2018-09-24T19:00:33.996Z,1537815633.996 [sci2:L.DepthEnvelope] Running Loop=1
2018-09-24T19:00:34.038Z,1537815634.038 [sci2:K.SetSpeed] Running Loop=1
2018-09-24T19:00:34.055Z,1537815634.055 [sci2:J.Buoyancy] Running Loop=1
2018-09-24T19:00:34.059Z,1537815634.059 [sci2:I.Pitch] Running Loop=1
2018-09-24T19:00:34.076Z,1537815634.076 [sci2:StandardEnvelopes] Running Loop=1
2018-09-24T19:00:34.076Z,1537815634.076 [sci2:StandardEnvelopes:C.OffshoreEnvelope] Running Loop=1
2018-09-24T19:00:34.081Z,1537815634.081 [sci2:StandardEnvelopes:B.DepthEnvelope] Running Loop=1
2018-09-24T19:00:34.096Z,1537815634.096 [sci2:StandardEnvelopes:A.AltitudeEnvelope] Running Loop=1
2018-09-24T19:00:34.115Z,1537815634.115 [sci2:C] Stopped
2018-09-24T19:00:34.115Z,1537815634.115 [sci2:E] Running Loop=1
2018-09-24T19:00:34.115Z,1537815634.115 [sci2:Science] Running Loop=1
2018-09-24T19:00:34.119Z,1537815634.119 [sci2:Science:PeakDetectOil] Stopped
2018-09-24T19:00:34.119Z,1537815634.119 [sci2:Science:PeakDetectOil](DEBUG): Aggregate::uninitialize sci2:Science:PeakDetectOil
2018-09-24T19:00:34.119Z,1537815634.119 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2018-09-24T19:00:34.119Z,1537815634.119 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-24T19:00:34.119Z,1537815634.119 [sci2:Science:PeakDetectNO3] Stopped
2018-09-24T19:00:34.120Z,1537815634.120 [sci2:Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize sci2:Science:PeakDetectNO3
2018-09-24T19:00:34.120Z,1537815634.120 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2018-09-24T19:00:34.120Z,1537815634.120 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-24T19:00:34.120Z,1537815634.120 [sci2:Science:HighestChlPeakReport] Stopped
2018-09-24T19:00:34.120Z,1537815634.120 [sci2:Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize sci2:Science:HighestChlPeakReport
2018-09-24T19:00:34.120Z,1537815634.120 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2018-09-24T19:00:34.120Z,1537815634.120 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-24T19:00:34.120Z,1537815634.120 [sci2:Science:PeakDetectChl] Running Loop=1
2018-09-24T19:00:34.137Z,1537815634.137 [sci2:Science:Read_Oil] Running Loop=1
2018-09-24T19:00:34.138Z,1537815634.138 [sci2:Science:Read_Oil](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-24T19:00:34.140Z,1537815634.140 [sci2:Science:G] Running Loop=1
2018-09-24T19:00:34.141Z,1537815634.141 [sci2:Science:G](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-24T19:00:34.143Z,1537815634.143 [sci2:Science:F] Stopped
2018-09-24T19:00:34.143Z,1537815634.143 [sci2:Science:E] Stopped
2018-09-24T19:00:34.143Z,1537815634.143 [sci2:Science:D] Stopped
2018-09-24T19:00:34.143Z,1537815634.143 [sci2:Science:C] Stopped
2018-09-24T19:00:34.143Z,1537815634.143 [sci2:Science:B] Stopped
2018-09-24T19:00:34.143Z,1537815634.143 [sci2:Science:A] Stopped
2018-09-24T19:00:34.193Z,1537815634.193 [CBIT](ERROR): Communications Fault in component: RDI_Pathfinder
2018-09-24T19:00:34.357Z,1537815634.357 [RDI_Pathfinder](INFO): Powering down
2018-09-24T19:00:34.388Z,1537815634.388 [sci2:E] Stopped
2018-09-24T19:00:34.388Z,1537815634.388 [sci2:F] Running Loop=1
2018-09-24T19:00:34.513Z,1537815634.513 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-24T19:00:34.513Z,1537815634.513 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-24T19:00:34.682Z,1537815634.682 [sci2:F] Stopped
2018-09-24T19:00:34.682Z,1537815634.682 [sci2:G] Running Loop=1
2018-09-24T19:00:35.017Z,1537815635.017 [ThrusterServo](ERROR): Thruster uart error: serial timeout
2018-09-24T19:00:35.017Z,1537815635.017 [ThrusterServo] Communications Fault, FailCount= 1
2018-09-24T19:00:35.017Z,1537815635.017 [ThrusterServo](ERROR): Communications Fault
2018-09-24T19:00:35.021Z,1537815635.021 [CBIT](ERROR): Communications Fault in component: ThrusterServo
2018-09-24T19:00:35.135Z,1537815635.135 [sci2:G] Stopped
2018-09-24T19:00:35.135Z,1537815635.135 [sci2:StartingMission] Running Loop=1
2018-09-24T19:00:35.135Z,1537815635.135 [sci2:StartingMission](DEBUG): Aggregate::initialize sci2:StartingMission
2018-09-24T19:00:35.244Z,1537815635.244 [ThrusterServo](DEBUG): Uninitialize Thruster Servo.
2018-09-24T19:00:35.245Z,1537815635.245 [ThrusterServo](INFO): Powering down
2018-09-24T19:00:35.249Z,1537815635.249 [CBIT](INFO): Clearing failed state for component RDI_Pathfinder
2018-09-24T19:00:35.249Z,1537815635.249 [RDI_Pathfinder] No Fault, FailCount= 1
2018-09-24T19:00:35.502Z,1537815635.502 [sci2:NeedComms] Running Loop=1
2018-09-24T19:00:35.502Z,1537815635.502 [sci2:NeedComms](DEBUG): Aggregate::initialize sci2:NeedComms
2018-09-24T19:00:35.503Z,1537815635.503 [sci2:NeedComms:B.GoToSurface] Running Loop=1
2018-09-24T19:00:35.503Z,1537815635.503 [sci2:NeedComms:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-24T19:00:35.503Z,1537815635.503 [sci2:NeedComms:B.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-24T19:00:35.503Z,1537815635.503 [sci2:NeedComms:B.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-24T19:00:35.504Z,1537815635.504 [sci2:NeedComms:B.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-24T19:00:35.504Z,1537815635.504 [sci2:NeedComms:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-24T19:00:35.505Z,1537815635.505 [sci2:NeedComms:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-24T19:00:35.505Z,1537815635.505 [sci2:NeedComms:A] Running Loop=1
2018-09-24T19:00:35.511Z,1537815635.511 [sci2:NeedComms:A](INFO): last time_fix was: 1537815189.000000 second since 1970/01/01T00:00:00Z
2018-09-24T19:00:35.513Z,1537815635.513 [sci2:NeedComms:A] Stopped
2018-09-24T19:00:35.898Z,1537815635.898 [sci2:NeedComms:C] Running Loop=1
2018-09-24T19:00:36.129Z,1537815636.129 [CBIT](INFO): Clearing failed state for component ThrusterServo
2018-09-24T19:00:36.129Z,1537815636.129 [ThrusterServo] No Fault, FailCount= 1
2018-09-24T19:00:36.302Z,1537815636.302 [sci2:NeedComms:C](DEBUG): Initialize ReadDataComponent to sense time_fix
2018-09-24T19:00:36.355Z,1537815636.355 [ThrusterServo](DEBUG): Initializing EZServoServo.
2018-09-24T19:00:36.361Z,1537815636.361 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2018-09-24T19:00:48.673Z,1537815648.673 [RDI_Pathfinder](ERROR): Failed to parse:Pathfinder
2018-09-24T19:01:02.027Z,1537815662.027 [CommandLine](IMPORTANT): got command stop
2018-09-24T19:01:02.027Z,1537815662.027 [Supervisor](INFO): Stop Mission called by CommandLine::commandStop
2018-09-24T19:01:02.130Z,1537815662.130 [MissionManager](INFO): MissionManager is completed.
2018-09-24T19:01:02.130Z,1537815662.130 [MissionManager](INFO): Uninitializing Mission sci2
2018-09-24T19:01:02.130Z,1537815662.130 [sci2] Stopped
2018-09-24T19:01:02.130Z,1537815662.130 [sci2](DEBUG): Aggregate::uninitialize sci2
2018-09-24T19:01:02.130Z,1537815662.130 [sci2:Science] Stopped
2018-09-24T19:01:02.130Z,1537815662.130 [sci2:Science](DEBUG): Aggregate::uninitialize sci2:Science
2018-09-24T19:01:02.130Z,1537815662.130 [sci2:Science:G] Stopped
2018-09-24T19:01:02.130Z,1537815662.130 [sci2:Science:Read_Oil] Stopped
2018-09-24T19:01:02.130Z,1537815662.130 [sci2:Science:PeakDetectChl] Stopped
2018-09-24T19:01:02.131Z,1537815662.131 [sci2:Science:PeakDetectChl](DEBUG): Aggregate::uninitialize sci2:Science:PeakDetectChl
2018-09-24T19:01:02.131Z,1537815662.131 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2018-09-24T19:01:02.131Z,1537815662.131 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-24T19:01:02.131Z,1537815662.131 [sci2:NeedComms] Stopped
2018-09-24T19:01:02.131Z,1537815662.131 [sci2:NeedComms](DEBUG): Aggregate::uninitialize sci2:NeedComms
2018-09-24T19:01:02.131Z,1537815662.131 [sci2:NeedComms:B.GoToSurface] Stopped
2018-09-24T19:01:02.131Z,1537815662.131 [sci2:NeedComms:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-24T19:01:02.131Z,1537815662.131 [sci2:NeedComms:C] Stopped
2018-09-24T19:01:02.131Z,1537815662.131 [sci2:StandardEnvelopes] Stopped
2018-09-24T19:01:02.131Z,1537815662.131 [sci2:StandardEnvelopes](DEBUG): Aggregate::uninitialize sci2:StandardEnvelopes
2018-09-24T19:01:02.132Z,1537815662.132 [sci2:StandardEnvelopes:A.AltitudeEnvelope] Stopped
2018-09-24T19:01:02.132Z,1537815662.132 [sci2:StandardEnvelopes:A.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-24T19:01:02.132Z,1537815662.132 [sci2:StandardEnvelopes:B.DepthEnvelope] Stopped
2018-09-24T19:01:02.132Z,1537815662.132 [sci2:StandardEnvelopes:B.DepthEnvelope](DEBUG): Uninitialize.
2018-09-24T19:01:02.132Z,1537815662.132 [sci2:StandardEnvelopes:C.OffshoreEnvelope] Stopped
2018-09-24T19:01:02.132Z,1537815662.132 [sci2:StandardEnvelopes:C.OffshoreEnvelope](DEBUG): Uninitialize OffshoreEnvelopeComponent.
2018-09-24T19:01:02.132Z,1537815662.132 [sci2:StartingMission] Stopped
2018-09-24T19:01:02.132Z,1537815662.132 [sci2:StartingMission](DEBUG): Aggregate::uninitialize sci2:StartingMission
2018-09-24T19:01:02.132Z,1537815662.132 [sci2:I.Pitch] Stopped
2018-09-24T19:01:02.132Z,1537815662.132 [sci2:J.Buoyancy] Stopped
2018-09-24T19:01:02.132Z,1537815662.132 [sci2:J.Buoyancy](DEBUG): Uninitialize Buoyancy Component.
2018-09-24T19:01:02.133Z,1537815662.133 [sci2:K.SetSpeed] Stopped
2018-09-24T19:01:02.137Z,1537815662.137 [sci2:K.SetSpeed](DEBUG): Uninitialize.
2018-09-24T19:01:02.137Z,1537815662.137 [sci2:L.DepthEnvelope] Stopped
2018-09-24T19:01:02.137Z,1537815662.137 [sci2:L.DepthEnvelope](DEBUG): Uninitialize.
2018-09-24T19:01:02.137Z,1537815662.137 [sci2:M.AltitudeEnvelope] Stopped
2018-09-24T19:01:02.137Z,1537815662.137 [sci2:M.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-24T19:01:02.137Z,1537815662.137 [sci2:N.YoYo] Stopped
2018-09-24T19:01:02.137Z,1537815662.137 [sci2:N.YoYo](DEBUG): Uninitialize YoYoComponent.
2018-09-24T19:01:02.341Z,1537815662.341 [MissionManager](IMPORTANT): Started mission Default
2018-09-24T19:01:02.342Z,1537815662.342 [Default] Running Loop=1
2018-09-24T19:01:02.342Z,1537815662.342 [Default](DEBUG): Aggregate::initialize Default
2018-09-24T19:01:02.342Z,1537815662.342 [Default:B.GoToSurface] Running Loop=1
2018-09-24T19:01:02.342Z,1537815662.342 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-24T19:01:02.342Z,1537815662.342 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-24T19:01:02.343Z,1537815662.343 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-24T19:01:02.343Z,1537815662.343 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-24T19:01:02.343Z,1537815662.343 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-24T19:01:02.344Z,1537815662.344 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-24T19:01:02.344Z,1537815662.344 [Default:A.Wait] Running Loop=1
2018-09-24T19:01:02.344Z,1537815662.344 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-24T19:01:02.565Z,1537815662.565 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-24T19:01:15.487Z,1537815675.487 [Default:A.Wait](INFO): Done Waiting.
2018-09-24T19:01:15.488Z,1537815675.488 [Default:A.Wait] Stopped
2018-09-24T19:01:15.488Z,1537815675.488 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-24T19:01:15.916Z,1537815675.916 [Default:CheckIn] Running Loop=1
2018-09-24T19:01:15.921Z,1537815675.921 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-24T19:01:15.921Z,1537815675.921 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-24T19:02:25.847Z,1537815745.847 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:03:26.248Z,1537815806.248 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:04:03.444Z,1537815843.444 [DataOverHttps](INFO): setting unavailable, lastComms_.elapsed()=180.399750
2018-09-24T19:04:41.454Z,1537815881.454 [NAL9602](INFO): GPS fix at 20180924T190433: (36.850932, -121.929148)
2018-09-24T19:04:41.539Z,1537815881.539 [Default:CheckIn:Read_GPS] Stopped
2018-09-24T19:04:41.539Z,1537815881.539 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-24T19:05:01.338Z,1537815901.338 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.005237
2018-09-24T19:05:05.475Z,1537815905.475 [DataOverHttps](INFO): Sending 64 bytes from file Logs/20180924T174057/Courier0030.lzma
2018-09-24T19:05:06.237Z,1537815906.237 [DataOverHttps](INFO): Moved sent file to Logs/20180924T174057/Courier0030.lzma.bak
2018-09-24T19:05:06.237Z,1537815906.237 [DataOverHttps](INFO): SBD MOMSN=8574778
2018-09-24T19:05:10.224Z,1537815910.224 [NAL9602](INFO): SBD MO Status=1, MOMSN=1582, MT Status=0, MTMSN=0
2018-09-24T19:05:10.284Z,1537815910.284 [NAL9602](INFO): Sent 64 bytes from file Logs/20180924T174057/Courier0030.lzma
2018-09-24T19:05:10.284Z,1537815910.284 [NAL9602](INFO): Packets left to send: 0
2018-09-24T19:05:10.286Z,1537815910.286 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T174057/Courier0030.lzma.parts/0000.sbd
2018-09-24T19:05:10.287Z,1537815910.287 [NAL9602](DEBUG): Completed sending Logs/20180924T174057/Courier0030.lzma
2018-09-24T19:05:15.605Z,1537815915.605 [DataOverHttps](INFO): Sending 665 bytes from file Logs/20180924T174057/Express0031.lzma
2018-09-24T19:05:16.381Z,1537815916.381 [DataOverHttps](INFO): Moved sent file to Logs/20180924T174057/Express0031.lzma.bak
2018-09-24T19:05:16.382Z,1537815916.382 [DataOverHttps](INFO): SBD MOMSN=8574781
2018-09-24T19:05:27.474Z,1537815927.474 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180924T174057/Courier0033.lzma
2018-09-24T19:05:28.661Z,1537815928.661 [DataOverHttps](INFO): Moved sent file to Logs/20180924T174057/Courier0033.lzma.bak
2018-09-24T19:05:28.661Z,1537815928.661 [DataOverHttps](INFO): SBD MOMSN=8574801
2018-09-24T19:05:40.227Z,1537815940.227 [DataOverHttps](INFO): Sending 70 bytes from file Logs/20180924T174057/Express0034.lzma
2018-09-24T19:05:40.663Z,1537815940.663 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-32768,V
2018-09-24T19:05:41.021Z,1537815941.021 [DataOverHttps](INFO): Moved sent file to Logs/20180924T174057/Express0034.lzma.bak
2018-09-24T19:05:41.021Z,1537815941.021 [DataOverHttps](INFO): SBD MOMSN=8574803
2018-09-24T19:05:41.542Z,1537815941.542 [NAL9602](INFO): Powering down
2018-09-24T19:05:41.649Z,1537815941.649 [Default:CheckIn:Read_Iridium] Stopped
2018-09-24T19:05:41.649Z,1537815941.649 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-24T19:05:41.649Z,1537815941.649 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-24T19:07:11.880Z,1537816031.880 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:08:12.283Z,1537816092.283 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:08:41.080Z,1537816121.080 [DataOverHttps](INFO): setting unavailable, lastComms_.elapsed()=180.059372
2018-09-24T19:09:08.801Z,1537816148.801 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.008624
2018-09-24T19:10:42.036Z,1537816242.036 [Default:CheckIn:C.Wait](INFO): Done Waiting.
2018-09-24T19:10:42.036Z,1537816242.036 [Default:CheckIn:C.Wait] Stopped
2018-09-24T19:10:42.036Z,1537816242.036 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-24T19:10:42.037Z,1537816242.037 [Default:CheckIn:D] Running Loop=1
2018-09-24T19:10:42.479Z,1537816242.479 [Default:CheckIn:D] Stopped
2018-09-24T19:10:42.479Z,1537816242.479 [Default:CheckIn:E] Running Loop=1
2018-09-24T19:10:42.848Z,1537816242.848 [Default:CheckIn:E](IMPORTANT): Default mission has been running for 9.668960 min
2018-09-24T19:10:42.848Z,1537816242.848 [Default:CheckIn:E] Stopped
2018-09-24T19:10:42.848Z,1537816242.848 [Default:CheckIn](INFO): Completed Default:CheckIn
2018-09-24T19:10:42.848Z,1537816242.848 [Default:CheckIn] Stopped
2018-09-24T19:10:42.848Z,1537816242.848 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-24T19:10:42.853Z,1537816242.853 [Default:CheckIn](INFO): Running loop #2
2018-09-24T19:10:42.853Z,1537816242.853 [Default:CheckIn] Running Loop=2
2018-09-24T19:10:42.853Z,1537816242.853 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-24T19:10:42.853Z,1537816242.853 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-24T19:10:43.602Z,1537816243.602 [NAL9602](INFO): Powering up
2018-09-24T19:10:54.807Z,1537816254.807 [NAL9602](INFO): NAL9602 initialized
2018-09-24T19:11:10.010Z,1537816270.010 [NAL9602](INFO): SBD MO Status=0, MOMSN=1583, MT Status=0, MTMSN=0
2018-09-24T19:11:10.010Z,1537816270.010 [NAL9602](INFO): No messages in MT queue
2018-09-24T19:11:12.796Z,1537816272.796 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:12:09.192Z,1537816329.192 [DataOverHttps](INFO): setting unavailable, lastComms_.elapsed()=180.400192
2018-09-24T19:12:35.598Z,1537816355.598 [NAL9602](INFO): GPS fix at 20180924T191226: (36.851431, -121.928828)
2018-09-24T19:12:35.690Z,1537816355.690 [Default:CheckIn:Read_GPS] Stopped
2018-09-24T19:12:35.690Z,1537816355.690 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-24T19:12:49.328Z,1537816369.328 [NAL9602](INFO): SBD MO Status=1, MOMSN=1584, MT Status=0, MTMSN=0
2018-09-24T19:12:49.374Z,1537816369.374 [NAL9602](INFO): Sent 64 bytes from file Logs/20180924T174057/Courier0036.lzma
2018-09-24T19:12:49.375Z,1537816369.375 [NAL9602](INFO): Packets left to send: 0
2018-09-24T19:12:49.378Z,1537816369.378 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T174057/Courier0036.lzma.parts/0000.sbd
2018-09-24T19:12:49.379Z,1537816369.379 [NAL9602](DEBUG): Completed sending Logs/20180924T174057/Courier0036.lzma
2018-09-24T19:12:57.072Z,1537816377.072 [NAL9602](INFO): SBD MO Status=1, MOMSN=1585, MT Status=0, MTMSN=0
2018-09-24T19:12:57.125Z,1537816377.125 [NAL9602](INFO): Sent 144 bytes from file Logs/20180924T174057/Express0037.lzma
2018-09-24T19:12:57.125Z,1537816377.125 [NAL9602](INFO): Packets left to send: 0
2018-09-24T19:12:57.127Z,1537816377.127 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T174057/Express0037.lzma.parts/0000.sbd
2018-09-24T19:12:57.127Z,1537816377.127 [NAL9602](DEBUG): Completed sending Logs/20180924T174057/Express0037.lzma
2018-09-24T19:13:04.289Z,1537816384.289 [NAL9602](INFO): SBD MO Status=0, MOMSN=1586, MT Status=0, MTMSN=0
2018-09-24T19:13:04.395Z,1537816384.395 [Default:CheckIn:Read_Iridium] Stopped
2018-09-24T19:13:04.395Z,1537816384.395 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-24T19:13:04.396Z,1537816384.396 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-24T19:13:13.880Z,1537816393.880 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:13:35.070Z,1537816415.070 [NAL9602](INFO): Powering down
2018-09-24T19:14:13.872Z,1537816453.872 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:15:14.268Z,1537816514.268 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:16:15.068Z,1537816575.068 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:17:15.068Z,1537816635.068 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:18:05.115Z,1537816685.115 [Default:CheckIn:C.Wait](INFO): Done Waiting.
2018-09-24T19:18:05.115Z,1537816685.115 [Default:CheckIn:C.Wait] Stopped
2018-09-24T19:18:05.115Z,1537816685.115 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-24T19:18:05.116Z,1537816685.116 [Default:CheckIn:D] Running Loop=1
2018-09-24T19:18:05.538Z,1537816685.538 [Default:CheckIn:D] Stopped
2018-09-24T19:18:05.538Z,1537816685.538 [Default:CheckIn:E] Running Loop=1
2018-09-24T19:18:05.957Z,1537816685.957 [Default:CheckIn:E](IMPORTANT): Default mission has been running for 17.053265 min
2018-09-24T19:18:05.957Z,1537816685.957 [Default:CheckIn:E] Stopped
2018-09-24T19:18:05.957Z,1537816685.957 [Default:CheckIn](INFO): Completed Default:CheckIn
2018-09-24T19:18:05.958Z,1537816685.958 [Default:CheckIn] Stopped
2018-09-24T19:18:05.958Z,1537816685.958 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-24T19:18:05.958Z,1537816685.958 [Default:CheckIn](INFO): Running loop #3
2018-09-24T19:18:05.958Z,1537816685.958 [Default:CheckIn] Running Loop=3
2018-09-24T19:18:05.958Z,1537816685.958 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-24T19:18:05.958Z,1537816685.958 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-24T19:18:06.679Z,1537816686.679 [NAL9602](INFO): Powering up
2018-09-24T19:18:15.072Z,1537816695.072 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:18:17.874Z,1537816697.874 [NAL9602](INFO): NAL9602 initialized
2018-09-24T19:18:30.280Z,1537816710.280 [NAL9602](IMPORTANT): SBD MO Status=0, MOMSN=1587, MT Status=1, MTMSN=80
2018-09-24T19:18:30.280Z,1537816710.280 [NAL9602](INFO): Data available in MT queue
2018-09-24T19:18:30.978Z,1537816710.978 [NAL9602](INFO): Received command:load Science/sci2.xml;set sci2.MissionTimeout 1 hour;set sci2.NeedCommsTime 20 minute;set sci2.Lat1 36.844 degree;set sci2.Lon1 -121.888 angular_degree;set sci2.YoYoMaxDepth 20 meter;set sci2.MaxDepth 25 meter;run
2018-09-24T19:18:30.999Z,1537816710.999 [CommandLine](IMPORTANT): got command load ./Missions/Science/sci2.xml
2018-09-24T19:18:30.000Z,1537816711.000 [MissionManager](INFO): Loading Mission: ./Missions/Science/sci2.xml
2018-09-24T19:18:31.143Z,1537816711.143 [MissionManager](INFO): DefineArg sci2.MissionTimeout = 2.000000 h
2018-09-24T19:18:31.145Z,1537816711.145 [MissionManager](INFO): DefineArg sci2.NeedCommsTime = 60.000000 min
2018-09-24T19:18:31.147Z,1537816711.147 [MissionManager](INFO): DefineArg sci2.Repeat = 1.000000 count
2018-09-24T19:18:31.149Z,1537816711.149 [MissionManager](INFO): DefineArg sci2.Lat1 = nan arcdeg
2018-09-24T19:18:31.151Z,1537816711.151 [MissionManager](INFO): DefineArg sci2.Lon1 = nan arcdeg
2018-09-24T19:18:31.153Z,1537816711.153 [MissionManager](INFO): DefineArg sci2.Lat2 = nan arcdeg
2018-09-24T19:18:31.155Z,1537816711.155 [MissionManager](INFO): DefineArg sci2.Lon2 = nan arcdeg
2018-09-24T19:18:31.158Z,1537816711.158 [MissionManager](INFO): DefineArg sci2.Lat3 = nan arcdeg
2018-09-24T19:18:31.160Z,1537816711.160 [MissionManager](INFO): DefineArg sci2.Lon3 = nan arcdeg
2018-09-24T19:18:31.162Z,1537816711.162 [MissionManager](INFO): DefineArg sci2.Lat4 = nan arcdeg
2018-09-24T19:18:31.164Z,1537816711.164 [MissionManager](INFO): DefineArg sci2.Lon4 = nan arcdeg
2018-09-24T19:18:31.166Z,1537816711.166 [MissionManager](INFO): DefineArg sci2.Lat5 = nan arcdeg
2018-09-24T19:18:31.168Z,1537816711.168 [MissionManager](INFO): DefineArg sci2.Lon5 = nan arcdeg
2018-09-24T19:18:31.219Z,1537816711.219 [MissionManager](INFO): DefineArg sci2.Lat6 = nan arcdeg
2018-09-24T19:18:31.221Z,1537816711.221 [MissionManager](INFO): DefineArg sci2.Lon6 = nan arcdeg
2018-09-24T19:18:31.223Z,1537816711.223 [MissionManager](INFO): DefineArg sci2.Lat7 = nan arcdeg
2018-09-24T19:18:31.225Z,1537816711.225 [MissionManager](INFO): DefineArg sci2.Lon7 = nan arcdeg
2018-09-24T19:18:31.227Z,1537816711.227 [MissionManager](INFO): DefineArg sci2.Speed = 1.000000 m/s
2018-09-24T19:18:31.245Z,1537816711.245 [MissionManager](INFO): DefineArg sci2.YoYoMinDepth = 2.000000 m
2018-09-24T19:18:31.248Z,1537816711.248 [MissionManager](INFO): DefineArg sci2.YoYoMaxDepth = 200.000000 m
2018-09-24T19:18:31.250Z,1537816711.250 [MissionManager](INFO): DefineArg sci2.YoYoMinAltitude = 9.000000 m
2018-09-24T19:18:31.252Z,1537816711.252 [MissionManager](INFO): DefineArg sci2.YoYoUpPitch = 20.000000 arcdeg
2018-09-24T19:18:31.271Z,1537816711.271 [MissionManager](INFO): DefineArg sci2.YoYoDownPitch = -20.000000 arcdeg
2018-09-24T19:18:31.273Z,1537816711.273 [MissionManager](INFO): DefineArg sci2.BuoyancyNeutral = 205.000004 cc
2018-09-24T19:18:31.276Z,1537816711.276 [MissionManager](INFO): DefineArg sci2.MassDefault = 0.000000 cm
2018-09-24T19:18:31.278Z,1537816711.278 [MissionManager](INFO): DefineArg sci2.MinAltitude = 5.000000 m
2018-09-24T19:18:31.280Z,1537816711.280 [MissionManager](INFO): DefineArg sci2.MaxDepth = 205.000000 m
2018-09-24T19:18:31.311Z,1537816711.311 [MissionManager](INFO): DefineArg sci2.MinOffshore = 2.000000 km
2018-09-24T19:18:31.311Z,1537816711.311 [MissionManager](INFO): Inserting Stack: Missions/Insert/Science.xml
2018-09-24T19:18:31.620Z,1537816711.620 [MissionManager](INFO): DefineArg sci2:Science.SampleISUS = 0 bool
2018-09-24T19:18:31.623Z,1537816711.623 [MissionManager](INFO): DefineArg sci2:Science.SampleISUSmaxPitch = 60.000000 arcdeg
2018-09-24T19:18:31.625Z,1537816711.625 [MissionManager](INFO): DefineArg sci2:Science.SampleISUSminPitch = -60.000000 arcdeg
2018-09-24T19:18:31.627Z,1537816711.627 [MissionManager](INFO): DefineArg sci2:Science.PeakDetectChlActive = 0 bool
2018-09-24T19:18:31.629Z,1537816711.629 [MissionManager](INFO): DefineArg sci2:Science.HighestChlPeakReportActive = 0 bool
2018-09-24T19:18:31.631Z,1537816711.631 [MissionManager](INFO): DefineArg sci2:Science.PatchTracking = 0 bool
2018-09-24T19:18:31.633Z,1537816711.633 [MissionManager](INFO): DefineArg sci2:Science.FilterWidthHorizontal = 3.000000 count
2018-09-24T19:18:31.635Z,1537816711.635 [MissionManager](INFO): DefineArg sci2:Science.NumProfilesSlidingwindow = 100.000000 count
2018-09-24T19:18:31.637Z,1537816711.637 [MissionManager](INFO): DefineArg sci2:Science.PeakDetectNO3Active = 0 bool
2018-09-24T19:18:31.639Z,1537816711.639 [MissionManager](INFO): DefineArg sci2:Science.PeakDetectOilActive = 0 bool
2018-09-24T19:18:31.640Z,1537816711.640 [MissionManager](INFO): DefineArg sci2:Science.UpwardDerivativeOfTemperatureActive = 0 bool
2018-09-24T19:18:31.645Z,1537816711.645 [MissionManager](INFO): DefineArg sci2:Science.EnabledAanderaaO2 = 0.000000 bool
2018-09-24T19:18:31.647Z,1537816711.647 [MissionManager](INFO): DefineArg sci2:Science.EnabledNeilBrown = 0.000000 bool
2018-09-24T19:18:31.650Z,1537816711.650 [MissionManager](INFO): DefineArg sci2:Science.EnabledSeabird = 0.000000 bool
2018-09-24T19:18:31.652Z,1537816711.652 [MissionManager](INFO): DefineArg sci2:Science.EnabledTurbulence_NPS = 0.000000 bool
2018-09-24T19:18:31.654Z,1537816711.654 [MissionManager](INFO): DefineArg sci2:Science.EnabledWetLabsBB2FL = 0.000000 bool
2018-09-24T19:18:31.657Z,1537816711.657 [MissionManager](INFO): DefineArg sci2:Science.EnabledWetLabsSeaOWL_UV_A = 1.000000 bool
2018-09-24T19:18:31.659Z,1537816711.659 [MissionManager](INFO): DefineArg sci2:Science.EnabledISUS = 0.000000 bool
2018-09-24T19:18:31.661Z,1537816711.661 [MissionManager](INFO): DefineArg sci2:Science.LowPassWindowLength = 20.000000 count
2018-09-24T19:18:31.663Z,1537816711.663 [MissionManager](INFO): DefineArg sci2:Science.PeakChlShallowBound = nan m
2018-09-24T19:18:31.666Z,1537816711.666 [MissionManager](INFO): DefineArg sci2:Science.PeakChlDeepBound = nan m
2018-09-24T19:18:31.668Z,1537816711.668 [MissionManager](INFO): DefineOutput sci2:Science.PeakChl = 0.000000 ug/l
2018-09-24T19:18:31.719Z,1537816711.719 [MissionManager](INFO): DefineOutput sci2:Science.PeakChlDepth = 0.000000 m
2018-09-24T19:18:31.721Z,1537816711.721 [MissionManager](INFO): DefineOutput sci2:Science.PeakChlTemperature = 0.000000 degC
2018-09-24T19:18:31.723Z,1537816711.723 [MissionManager](INFO): DefineOutput sci2:Science.PeakChlLatitude = nan arcdeg
2018-09-24T19:18:31.726Z,1537816711.726 [MissionManager](INFO): DefineOutput sci2:Science.PeakChlLongitude = nan arcdeg
2018-09-24T19:18:31.728Z,1537816711.728 [MissionManager](INFO): DefineOutput sci2:Science.PeakNO3 = 0.000000 umol/l
2018-09-24T19:18:31.751Z,1537816711.751 [MissionManager](INFO): DefineOutput sci2:Science.PeakNO3Depth = 0.000000 m
2018-09-24T19:18:31.753Z,1537816711.753 [MissionManager](INFO): DefineOutput sci2:Science.PeakNO3Latitude = nan arcdeg
2018-09-24T19:18:31.755Z,1537816711.755 [MissionManager](INFO): DefineOutput sci2:Science.PeakNO3Longitude = nan arcdeg
2018-09-24T19:18:31.757Z,1537816711.757 [MissionManager](INFO): DefineOutput sci2:Science.PatchChl = 0.000000 m
2018-09-24T19:18:31.760Z,1537816711.760 [MissionManager](INFO): DefineOutput sci2:Science.PatchChlDepth = 0.000000 m
2018-09-24T19:18:31.789Z,1537816711.789 [MissionManager](INFO): DefineOutput sci2:Science.PatchChlLatitude = nan arcdeg
2018-09-24T19:18:31.791Z,1537816711.791 [MissionManager](INFO): DefineOutput sci2:Science.PatchChlLongitude = nan arcdeg
2018-09-24T19:18:31.794Z,1537816711.794 [MissionManager](INFO): DefineOutput sci2:Science.PatchChlDistance = nan m
2018-09-24T19:18:31.796Z,1537816711.796 [MissionManager](INFO): DefineOutput sci2:Science.PeakOil = 0.000000 kg/m3
2018-09-24T19:18:31.814Z,1537816711.814 [MissionManager](INFO): DefineOutput sci2:Science.PeakOilDepth = 0.000000 m
2018-09-24T19:18:31.816Z,1537816711.816 [MissionManager](INFO): DefineOutput sci2:Science.PeakOilLatitude = nan arcdeg
2018-09-24T19:18:31.819Z,1537816711.819 [MissionManager](INFO): DefineOutput sci2:Science.PeakOilLongitude = nan arcdeg
2018-09-24T19:18:31.878Z,1537816711.878 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-24T19:18:31.887Z,1537816711.887 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-24T19:18:31.923Z,1537816711.923 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-24T19:18:31.951Z,1537816711.951 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-24T19:18:31.971Z,1537816711.971 [MissionManager](INFO): RedefineArg sci2:Science.SampleISUS = value:1 bool
2018-09-24T19:18:31.983Z,1537816711.983 [MissionManager](INFO): RedefineArg sci2:Science.PeakDetectChlActive = value:1 bool
2018-09-24T19:18:31.983Z,1537816711.983 [MissionManager](INFO): Inserting Stack: Missions/Insert/NeedComms.xml
2018-09-24T19:18:32.128Z,1537816712.128 [MissionManager](INFO): DefineArg sci2:NeedComms.DiveInterval = 3.000000 h
2018-09-24T19:18:32.138Z,1537816712.138 [MissionManager](INFO): DefineArg sci2:NeedComms.WaitForPitchUp = 10.000000 min
2018-09-24T19:18:32.140Z,1537816712.140 [MissionManager](INFO): DefineArg sci2:NeedComms.SurfacePitch = 20.000000 arcdeg
2018-09-24T19:18:32.142Z,1537816712.142 [MissionManager](INFO): DefineArg sci2:NeedComms.SurfaceDepthRate = nan m/s
2018-09-24T19:18:32.144Z,1537816712.144 [MissionManager](INFO): DefineArg sci2:NeedComms.SurfaceSpeed = 1.000000 m/s
2018-09-24T19:18:32.189Z,1537816712.189 [MissionManager](INFO): DefineArg sci2:NeedComms.GPSTimeout = 7.000000 min
2018-09-24T19:18:32.191Z,1537816712.191 [MissionManager](INFO): DefineArg sci2:NeedComms.CommsTimeout = 30.000000 min
2018-09-24T19:18:32.196Z,1537816712.196 [sci2:NeedComms:B.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-24T19:18:32.228Z,1537816712.228 [MissionManager](INFO): Inserting Stack: Missions/Insert/StandardEnvelopes.xml
2018-09-24T19:18:32.318Z,1537816712.318 [MissionManager](INFO): DefineArg sci2:StandardEnvelopes.MinAltitude = 5.000000 m
2018-09-24T19:18:32.321Z,1537816712.321 [MissionManager](INFO): DefineArg sci2:StandardEnvelopes.MaxDepth = 200.000000 m
2018-09-24T19:18:32.323Z,1537816712.323 [MissionManager](INFO): DefineArg sci2:StandardEnvelopes.MinOffshore = 2000.000000 m
2018-09-24T19:18:32.324Z,1537816712.324 [sci2:StandardEnvelopes:A.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-24T19:18:32.366Z,1537816712.366 [sci2:StandardEnvelopes:B.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-24T19:18:32.385Z,1537816712.385 [sci2:StandardEnvelopes:C.OffshoreEnvelope](DEBUG): Construct OffshoreEnvelope.
2018-09-24T19:18:32.413Z,1537816712.413 [sci2:I.Pitch](DEBUG): Construct.
2018-09-24T19:18:32.417Z,1537816712.417 [sci2:J.Buoyancy](DEBUG): Construct Buoyancy.
2018-09-24T19:18:32.419Z,1537816712.419 [sci2:K.SetSpeed](DEBUG): Construct.
2018-09-24T19:18:32.443Z,1537816712.443 [sci2:L.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-24T19:18:32.460Z,1537816712.460 [sci2:M.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-24T19:18:32.465Z,1537816712.465 [sci2:N.YoYo](DEBUG): Construct YoYo.
2018-09-24T19:18:32.472Z,1537816712.472 [sci2:Lap:Wpt1:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-24T19:18:32.477Z,1537816712.477 [sci2:Lap:Wpt2:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-24T19:18:32.482Z,1537816712.482 [sci2:Lap:Wpt3:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-24T19:18:32.486Z,1537816712.486 [sci2:Lap:Wpt4:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-24T19:18:32.491Z,1537816712.491 [sci2:Lap:Wpt5:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-24T19:18:32.496Z,1537816712.496 [sci2:Lap:Wpt6:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-24T19:18:32.500Z,1537816712.500 [sci2:Lap:Wpt7:A.Waypoint](DEBUG): Construct Waypoint.
2018-09-24T19:18:32.546Z,1537816712.546 [MissionManager](DEBUG):
<?xml version="1.0" encoding="UTF-8"?>
<!-- ====================
Generated by TethysL
==================== -->
<Mission xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xmlns="Tethys"
xmlns:Units="Tethys/Units"
xmlns:Control="Tethys/Control"
xmlns:Guidance="Tethys/Guidance"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd"
Id="sci2">
<Description>
Vehicle yo-yo's to the specified waypoints, with science turned on.
</Description>
<DefineArg Name="MissionTimeout"><Description>
Maximum duration of mission
</Description><Units:hour/><Value>2</Value></DefineArg>
<DefineArg Name="NeedCommsTime"><Description>
How often to surface for commumications
</Description><Units:minute/><Value>60</Value></DefineArg>
<DefineArg Name="Repeat"><Description>
Number of times the vehicle should try to cycle through waypoints..
</Description><Units:count/><Value>1</Value></DefineArg>
<DefineArg Name="Lat1"><Description>
Latitude of waypoint 1. If nan, waypoint is skipped.
</Description><Units:degree/><Value>NaN</Value></DefineArg>
<DefineArg Name="Lon1"><Description>
Longitude of waypoint 1. If nan, waypoint is skipped.
</Description><Units:degree/><Value>NaN</Value></DefineArg>
<DefineArg Name="Lat2"><Description>
Latitude of waypoint 2. If nan, waypoint is skipped.
</Description><Units:degree/><Value>NaN</Value></DefineArg>
<DefineArg Name="Lon2"><Description>
Longitude of waypoint 2. If nan, waypoint is skipped.
</Description><Units:degree/><Value>NaN</Value></DefineArg>
<DefineArg Name="Lat3"><Description>
Latitude of waypoint 3. If nan, waypoint is skipped.
</Description><Units:degree/><Value>NaN</Value></DefineArg>
<DefineArg Name="Lon3"><Description>
Longitude of waypoint 3. If nan, waypoint is skipped.
</Description><Units:degree/><Value>NaN</Value></DefineArg>
<DefineArg Name="Lat4"><Description>
Latitude of waypoint 4. If nan, waypoint is skipped.
</Description><Units:degree/><Value>NaN</Value></DefineArg>
<DefineArg Name="Lon4"><Description>
Longitude of waypoint 4. If nan, waypoint is skipped.
</Description><Units:degree/><Value>NaN</Value></DefineArg>
<DefineArg Name="Lat5"><Description>
Latitude of waypoint 5. If nan, waypoint is skipped.
</Description><Units:degree/><Value>NaN</Value></DefineArg>
<DefineArg Name="Lon5"><Description>
Longitude of waypoint 5. If nan, waypoint is skipped.
</Description><Units:degree/><Value>NaN</Value></DefineArg>
<DefineArg Name="Lat6"><Description>
Latitude of waypoint 6. If nan, waypoint is skipped.
</Description><Units:degree/><Value>NaN</Value></DefineArg>
<DefineArg Name="Lon6"><Description>
Longitude of waypoint 6. If nan, waypoint is skipped.
</Description><Units:degree/><Value>NaN</Value></DefineArg>
<DefineArg Name="Lat7"><Description>
Latitude of waypoint 7. If nan, waypoint is skipped.
</Description><Units:degree/><Value>NaN</Value></DefineArg>
<DefineArg Name="Lon7"><Description>
Longitude of waypoint 7. If nan, waypoint is skipped.
</Description><Units:degree/><Value>NaN</Value></DefineArg>
<DefineArg Name="Speed"><Description>
Speed while performing the YoYo behavior.
</Description><Units:meter_per_second/><Value>1</Value></DefineArg>
<DefineArg Name="YoYoMinDepth"><Description>
Minimum depth while performing the YoYo behavior.
</Description><Units:meter/><Value>2</Value></DefineArg>
<DefineArg Name="YoYoMaxDepth"><Description>
Maximum depth while performing the YoYo behavior.
</Description><Units:meter/><Value>200</Value></DefineArg>
<DefineArg Name="YoYoMinAltitude"><Description>
Minimum altitude while performing the YoYo behavior (for
bottom-terminated YoYos).
</Description><Units:meter/><Value>9</Value></DefineArg>
<DefineArg Name="YoYoUpPitch"><Description>
Vehicle up pitch while performing the YoYo behavior.
</Description><Units:degree/><Value>20</Value></DefineArg>
<DefineArg Name="YoYoDownPitch"><Description>
Vehicle down pitch while performing the YoYo behavior.
</Description><Units:degree/><Value>-20</Value></DefineArg>
<DefineArg Name="BuoyancyNeutral"><Description>
Buoyancy bladder position while performing the YoYo behavior. Defaults
to buoyancyNeutral setting in the Config/Control.cfg file. Set to NaN cc
for active buoyancy
</Description><Control:VerticalControl.buoyancyNeutral/></DefineArg>
<DefineArg Name="MassDefault"><Description>
Static setting for mass during the mission. Set to NaN mm for active
mass position
</Description><Control:VerticalControl.massDefault/></DefineArg>
<DefineArg Name="MinAltitude"><Description>
Minimum height above the sea floor for the entire mission.
</Description><Units:meter/><Value>5</Value></DefineArg>
<DefineArg Name="MaxDepth"><Description>
Maximum depth for the entire mission.
</Description><Units:meter/><Value>205</Value></DefineArg>
<DefineArg Name="MinOffshore"><Description>
Minimum offshore distance for the entire mission.
</Description><Units:kilometer/><Value>2</Value></DefineArg>
<Timeout Duration="MissionTimeout"/>
<Insert Filename="Insert/Science.xml">
<Description>
Most missions will run the science sensors. If you don't place this
aggregate above NeedComms, science instruments get turned off on the
last upcast and while floating on the surface.
</Description>
<RedefineArg Name="SampleISUS"><True/></RedefineArg>
<RedefineArg Name="PeakDetectChlActive"><True/></RedefineArg>
</Insert>
<Insert Filename="Insert/NeedComms.xml" Id="NeedComms"/>
<Assign><Sequence/><Arg Name="NeedComms:DiveInterval"/><Arg Name="NeedCommsTime"/></Assign>
<Insert Filename="Insert/StandardEnvelopes.xml"/>
<Assign><Sequence/><Arg Name="StandardEnvelopes:MinAltitude"/><Arg Name="MinAltitude"/></Assign>
<Assign><Sequence/><Arg Name="StandardEnvelopes:MaxDepth"/><Arg Name="MaxDepth"/></Assign>
<Assign><Sequence/><Arg Name="StandardEnvelopes:MinOffshore"/><Arg Name="MinOffshore"/></Assign>
<Call Id="StartingMission" RefId="NeedComms"/>
<Guidance:Pitch>
<Parallel/>
<Setting><Guidance:Pitch.massPosition/><Arg Name="MassDefault"/></Setting>
</Guidance:Pitch>
<Guidance:Buoyancy>
<Parallel/>
<Setting><Guidance:Buoyancy.position/><Arg Name="BuoyancyNeutral"/></Setting>
</Guidance:Buoyancy>
<Guidance:SetSpeed>
<Parallel/>
<Setting><Guidance:SetSpeed.speed/><Arg Name="Speed"/></Setting>
</Guidance:SetSpeed>
<Guidance:DepthEnvelope>
<Description>
Another depth envelope for the YoYo behavior. This envelope should
fall within the limits of the standard safety envelopes in
Insert/StandardEnvelopes.xml in order to avoid commanding high pitch
angles for depth-terminated YoYos.
</Description>
<Parallel/>
<Setting><Guidance:DepthEnvelope.minDepth/><Arg Name="YoYoMinDepth"/></Setting>
<Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="YoYoMaxDepth"/></Setting>
<Setting><Guidance:DepthEnvelope.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
<Setting><Guidance:DepthEnvelope.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
</Guidance:DepthEnvelope>
<Guidance:AltitudeEnvelope>
<Description>
Another altitude envelope for the YoYo behavior. This envelope
should fall within the limits of the standard safety envelopes in
Insert/StandardEnvelopes.xml in order to avoid commanding high pitch
angles for bottom-terminated YoYos.
</Description>
<Parallel/>
<Setting><Guidance:AltitudeEnvelope.minAltitude/><Arg Name="YoYoMinAltitude"/></Setting>
<Setting><Guidance:AltitudeEnvelope.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
</Guidance:AltitudeEnvelope>
<Guidance:YoYo>
<Parallel/>
<Setting><Guidance:YoYo.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
<Setting><Guidance:YoYo.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
</Guidance:YoYo>
<Aggregate Id="Lap">
<Sequence Repeat="Repeat"/>
<Aggregate Id="Wpt1">
<Sequence/>
<Guidance:Waypoint>
<Sequence/>
<Setting><Guidance:Waypoint.latitude/><Arg Name="Lat1"/></Setting>
<Setting><Guidance:Waypoint.longitude/><Arg Name="Lon1"/></Setting>
</Guidance:Waypoint>
</Aggregate>
<Aggregate Id="Wpt2">
<Sequence/>
<Guidance:Waypoint>
<Sequence/>
<Setting><Guidance:Waypoint.latitude/><Arg Name="Lat2"/></Setting>
<Setting><Guidance:Waypoint.longitude/><Arg Name="Lon2"/></Setting>
</Guidance:Waypoint>
</Aggregate>
<Aggregate Id="Wpt3">
<Sequence/>
<Guidance:Waypoint>
<Sequence/>
<Setting><Guidance:Waypoint.latitude/><Arg Name="Lat3"/></Setting>
<Setting><Guidance:Waypoint.longitude/><Arg Name="Lon3"/></Setting>
</Guidance:Waypoint>
</Aggregate>
<Aggregate Id="Wpt4">
<Sequence/>
<Guidance:Waypoint>
<Sequence/>
<Setting><Guidance:Waypoint.latitude/><Arg Name="Lat4"/></Setting>
<Setting><Guidance:Waypoint.longitude/><Arg Name="Lon4"/></Setting>
</Guidance:Waypoint>
</Aggregate>
<Aggregate Id="Wpt5">
<Sequence/>
<Guidance:Waypoint>
<Sequence/>
<Setting><Guidance:Waypoint.latitude/><Arg Name="Lat5"/></Setting>
<Setting><Guidance:Waypoint.longitude/><Arg Name="Lon5"/></Setting>
</Guidance:Waypoint>
</Aggregate>
<Aggregate Id="Wpt6">
<Sequence/>
<Guidance:Waypoint>
<Sequence/>
<Setting><Guidance:Waypoint.latitude/><Arg Name="Lat6"/></Setting>
<Setting><Guidance:Waypoint.longitude/><Arg Name="Lon6"/></Setting>
</Guidance:Waypoint>
</Aggregate>
<Aggregate Id="Wpt7">
<Sequence/>
<Guidance:Waypoint>
<Sequence/>
<Setting><Guidance:Waypoint.latitude/><Arg Name="Lat7"/></Setting>
<Setting><Guidance:Waypoint.longitude/><Arg Name="Lon7"/></Setting>
</Guidance:Waypoint>
</Aggregate>
</Aggregate>
</Mission>
2018-09-24T19:18:32.546Z,1537816712.546 [CommandLine](IMPORTANT): Loaded ./Missions/Science/sci2.xml
2018-09-24T19:18:40.367Z,1537816720.367 [CommandLine](IMPORTANT): got command set sci2.MissionTimeout 1.000000 hour
2018-09-24T19:18:40.369Z,1537816720.369 [CommandLine](IMPORTANT): got command set sci2.NeedCommsTime 20.000000 minute
2018-09-24T19:18:40.370Z,1537816720.370 [CommandLine](IMPORTANT): got command set sci2.Lat1 36.844002 degree
2018-09-24T19:18:40.372Z,1537816720.372 [CommandLine](IMPORTANT): got command set sci2.Lon1 -121.888000 angular_degree
2018-09-24T19:18:40.374Z,1537816720.374 [CommandLine](IMPORTANT): got command set sci2.YoYoMaxDepth 20.000000 meter
2018-09-24T19:18:40.376Z,1537816720.376 [CommandLine](IMPORTANT): got command set sci2.MaxDepth 25.000000 meter
2018-09-24T19:18:40.377Z,1537816720.377 [CommandLine](IMPORTANT): got command run
2018-09-24T19:18:40.379Z,1537816720.379 [CommandLine](IMPORTANT): Running
2018-09-24T19:18:40.434Z,1537816720.434 [RDI_Pathfinder](ERROR): No DVL communication! Re-initializing
2018-09-24T19:18:40.434Z,1537816720.434 [RDI_Pathfinder] Communications Fault, FailCount= 1
2018-09-24T19:18:40.434Z,1537816720.434 [RDI_Pathfinder](ERROR): Communications Fault
2018-09-24T19:18:40.477Z,1537816720.477 [Default] Stopped
2018-09-24T19:18:40.477Z,1537816720.477 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-24T19:18:40.477Z,1537816720.477 [Default:B.GoToSurface] Stopped
2018-09-24T19:18:40.477Z,1537816720.477 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-24T19:18:40.477Z,1537816720.477 [Default:CheckIn] Stopped
2018-09-24T19:18:40.478Z,1537816720.478 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-24T19:18:40.478Z,1537816720.478 [Default:CheckIn:Read_GPS] Stopped
2018-09-24T19:18:40.478Z,1537816720.478 [MissionManager](IMPORTANT): Started mission sci2
2018-09-24T19:18:40.478Z,1537816720.478 [sci2] Running Loop=1
2018-09-24T19:18:40.478Z,1537816720.478 [sci2](DEBUG): Aggregate::initialize sci2
2018-09-24T19:18:40.478Z,1537816720.478 [sci2:Science] Running Loop=1
2018-09-24T19:18:40.478Z,1537816720.478 [sci2:Science](DEBUG): Aggregate::initialize sci2:Science
2018-09-24T19:18:40.479Z,1537816720.479 [sci2:Science:A] Running Loop=1
2018-09-24T19:18:40.479Z,1537816720.479 [sci2:Science:B] Running Loop=1
2018-09-24T19:18:40.479Z,1537816720.479 [sci2:Science:C] Running Loop=1
2018-09-24T19:18:40.479Z,1537816720.479 [sci2:Science:D] Running Loop=1
2018-09-24T19:18:40.479Z,1537816720.479 [sci2:Science:E] Running Loop=1
2018-09-24T19:18:40.479Z,1537816720.479 [sci2:Science:F] Running Loop=1
2018-09-24T19:18:40.479Z,1537816720.479 [sci2:Science:G] Running Loop=1
2018-09-24T19:18:40.479Z,1537816720.479 [sci2:Science:Read_Oil] Running Loop=1
2018-09-24T19:18:40.479Z,1537816720.479 [sci2:Science:PeakDetectChl] Running Loop=1
2018-09-24T19:18:40.479Z,1537816720.479 [sci2:Science:PeakDetectChl](DEBUG): Aggregate::initialize sci2:Science:PeakDetectChl
2018-09-24T19:18:40.480Z,1537816720.480 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2018-09-24T19:18:40.480Z,1537816720.480 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-24T19:18:40.493Z,1537816720.493 [sci2:Science:HighestChlPeakReport] Running Loop=1
2018-09-24T19:18:40.493Z,1537816720.493 [sci2:Science:HighestChlPeakReport](DEBUG): Aggregate::initialize sci2:Science:HighestChlPeakReport
2018-09-24T19:18:40.493Z,1537816720.493 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2018-09-24T19:18:40.493Z,1537816720.493 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2018-09-24T19:18:40.494Z,1537816720.494 [sci2:Science:PeakDetectNO3] Running Loop=1
2018-09-24T19:18:40.494Z,1537816720.494 [sci2:Science:PeakDetectNO3](DEBUG): Aggregate::initialize sci2:Science:PeakDetectNO3
2018-09-24T19:18:40.494Z,1537816720.494 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2018-09-24T19:18:40.494Z,1537816720.494 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-24T19:18:40.495Z,1537816720.495 [sci2:Science:PeakDetectOil] Running Loop=1
2018-09-24T19:18:40.495Z,1537816720.495 [sci2:Science:PeakDetectOil](DEBUG): Aggregate::initialize sci2:Science:PeakDetectOil
2018-09-24T19:18:40.495Z,1537816720.495 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2018-09-24T19:18:40.496Z,1537816720.496 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-24T19:18:40.497Z,1537816720.497 [sci2:StandardEnvelopes] Running Loop=1
2018-09-24T19:18:40.509Z,1537816720.509 [sci2:StandardEnvelopes](DEBUG): Aggregate::initialize sci2:StandardEnvelopes
2018-09-24T19:18:40.509Z,1537816720.509 [sci2:StandardEnvelopes:A.AltitudeEnvelope] Running Loop=1
2018-09-24T19:18:40.509Z,1537816720.509 [sci2:StandardEnvelopes:A.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-24T19:18:40.509Z,1537816720.509 [sci2:StandardEnvelopes:B.DepthEnvelope] Running Loop=1
2018-09-24T19:18:40.509Z,1537816720.509 [sci2:StandardEnvelopes:B.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-24T19:18:40.510Z,1537816720.510 [sci2:StandardEnvelopes:C.OffshoreEnvelope] Running Loop=1
2018-09-24T19:18:40.510Z,1537816720.510 [sci2:StandardEnvelopes:C.OffshoreEnvelope](DEBUG): Initialize OffshoreEnvelopeComponent.
2018-09-24T19:18:40.510Z,1537816720.510 [sci2:I.Pitch] Running Loop=1
2018-09-24T19:18:40.510Z,1537816720.510 [sci2:I.Pitch](DEBUG): Initialize.
2018-09-24T19:18:40.510Z,1537816720.510 [sci2:J.Buoyancy] Running Loop=1
2018-09-24T19:18:40.510Z,1537816720.510 [sci2:J.Buoyancy](DEBUG): Initialize Buoyancy Component.
2018-09-24T19:18:40.510Z,1537816720.510 [sci2:K.SetSpeed] Running Loop=1
2018-09-24T19:18:40.510Z,1537816720.510 [sci2:K.SetSpeed](DEBUG): Initialize.
2018-09-24T19:18:40.510Z,1537816720.510 [sci2:L.DepthEnvelope] Running Loop=1
2018-09-24T19:18:40.511Z,1537816720.511 [sci2:L.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-24T19:18:40.511Z,1537816720.511 [sci2:M.AltitudeEnvelope] Running Loop=1
2018-09-24T19:18:40.511Z,1537816720.511 [sci2:M.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-24T19:18:40.511Z,1537816720.511 [sci2:N.YoYo] Running Loop=1
2018-09-24T19:18:40.511Z,1537816720.511 [sci2:N.YoYo](DEBUG): Initialize YoYoComponent.
2018-09-24T19:18:40.512Z,1537816720.512 [sci2:C] Running Loop=1
2018-09-24T19:18:40.512Z,1537816720.512 [sci2:N.YoYo] Running Loop=1
2018-09-24T19:18:40.522Z,1537816720.522 [sci2:M.AltitudeEnvelope] Running Loop=1
2018-09-24T19:18:40.523Z,1537816720.523 [sci2:L.DepthEnvelope] Running Loop=1
2018-09-24T19:18:40.524Z,1537816720.524 [sci2:K.SetSpeed] Running Loop=1
2018-09-24T19:18:40.530Z,1537816720.530 [sci2:J.Buoyancy] Running Loop=1
2018-09-24T19:18:40.531Z,1537816720.531 [sci2:I.Pitch] Running Loop=1
2018-09-24T19:18:40.532Z,1537816720.532 [sci2:StandardEnvelopes] Running Loop=1
2018-09-24T19:18:40.532Z,1537816720.532 [sci2:StandardEnvelopes:C.OffshoreEnvelope] Running Loop=1
2018-09-24T19:18:40.544Z,1537816720.544 [sci2:StandardEnvelopes:B.DepthEnvelope] Running Loop=1
2018-09-24T19:18:40.561Z,1537816720.561 [sci2:StandardEnvelopes:A.AltitudeEnvelope] Running Loop=1
2018-09-24T19:18:40.564Z,1537816720.564 [sci2:C] Stopped
2018-09-24T19:18:40.564Z,1537816720.564 [sci2:E] Running Loop=1
2018-09-24T19:18:40.564Z,1537816720.564 [sci2:Science] Running Loop=1
2018-09-24T19:18:40.571Z,1537816720.571 [sci2:Science:PeakDetectOil] Stopped
2018-09-24T19:18:40.571Z,1537816720.571 [sci2:Science:PeakDetectOil](DEBUG): Aggregate::uninitialize sci2:Science:PeakDetectOil
2018-09-24T19:18:40.571Z,1537816720.571 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2018-09-24T19:18:40.571Z,1537816720.571 [sci2:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-24T19:18:40.571Z,1537816720.571 [sci2:Science:PeakDetectNO3] Stopped
2018-09-24T19:18:40.571Z,1537816720.571 [sci2:Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize sci2:Science:PeakDetectNO3
2018-09-24T19:18:40.572Z,1537816720.572 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2018-09-24T19:18:40.572Z,1537816720.572 [sci2:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-24T19:18:40.572Z,1537816720.572 [sci2:Science:HighestChlPeakReport] Stopped
2018-09-24T19:18:40.572Z,1537816720.572 [sci2:Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize sci2:Science:HighestChlPeakReport
2018-09-24T19:18:40.572Z,1537816720.572 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2018-09-24T19:18:40.572Z,1537816720.572 [sci2:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-24T19:18:40.572Z,1537816720.572 [sci2:Science:PeakDetectChl] Running Loop=1
2018-09-24T19:18:40.583Z,1537816720.583 [sci2:Science:Read_Oil] Running Loop=1
2018-09-24T19:18:40.584Z,1537816720.584 [sci2:Science:Read_Oil](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-24T19:18:40.584Z,1537816720.584 [sci2:Science:G] Running Loop=1
2018-09-24T19:18:40.593Z,1537816720.593 [sci2:Science:G](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-24T19:18:40.594Z,1537816720.594 [sci2:Science:F] Stopped
2018-09-24T19:18:40.594Z,1537816720.594 [sci2:Science:E] Stopped
2018-09-24T19:18:40.594Z,1537816720.594 [sci2:Science:D] Stopped
2018-09-24T19:18:40.594Z,1537816720.594 [sci2:Science:C] Stopped
2018-09-24T19:18:40.594Z,1537816720.594 [sci2:Science:B] Stopped
2018-09-24T19:18:40.594Z,1537816720.594 [sci2:Science:A] Stopped
2018-09-24T19:18:40.617Z,1537816720.617 [CBIT](ERROR): Communications Fault in component: RDI_Pathfinder
2018-09-24T19:18:40.769Z,1537816720.769 [RDI_Pathfinder](INFO): Powering down
2018-09-24T19:18:40.793Z,1537816720.793 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-24T19:18:40.793Z,1537816720.793 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-24T19:18:40.804Z,1537816720.804 [sci2:E] Stopped
2018-09-24T19:18:40.809Z,1537816720.809 [sci2:F] Running Loop=1
2018-09-24T19:18:41.247Z,1537816721.247 [sci2:F] Stopped
2018-09-24T19:18:41.247Z,1537816721.247 [sci2:G] Running Loop=1
2018-09-24T19:18:41.532Z,1537816721.532 [sci2:G] Stopped
2018-09-24T19:18:41.532Z,1537816721.532 [sci2:StartingMission] Running Loop=1
2018-09-24T19:18:41.532Z,1537816721.532 [sci2:StartingMission](DEBUG): Aggregate::initialize sci2:StartingMission
2018-09-24T19:18:41.645Z,1537816721.645 [CBIT](INFO): Clearing failed state for component RDI_Pathfinder
2018-09-24T19:18:41.645Z,1537816721.645 [RDI_Pathfinder] No Fault, FailCount= 1
2018-09-24T19:18:41.932Z,1537816721.932 [sci2:NeedComms] Running Loop=1
2018-09-24T19:18:41.932Z,1537816721.932 [sci2:NeedComms](DEBUG): Aggregate::initialize sci2:NeedComms
2018-09-24T19:18:41.932Z,1537816721.932 [sci2:NeedComms:B.GoToSurface] Running Loop=1
2018-09-24T19:18:41.933Z,1537816721.933 [sci2:NeedComms:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-24T19:18:41.933Z,1537816721.933 [sci2:NeedComms:B.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-24T19:18:41.934Z,1537816721.934 [sci2:NeedComms:B.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-24T19:18:41.934Z,1537816721.934 [sci2:NeedComms:B.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-24T19:18:41.934Z,1537816721.934 [sci2:NeedComms:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-24T19:18:41.935Z,1537816721.935 [sci2:NeedComms:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-24T19:18:41.935Z,1537816721.935 [sci2:NeedComms:A] Running Loop=1
2018-09-24T19:18:41.937Z,1537816721.937 [sci2:NeedComms:A](INFO): last time_fix was: 1537816346.000000 second since 1970/01/01T00:00:00Z
2018-09-24T19:18:41.938Z,1537816721.938 [sci2:NeedComms:A] Stopped
2018-09-24T19:18:42.311Z,1537816722.311 [sci2:NeedComms:C] Running Loop=1
2018-09-24T19:18:42.704Z,1537816722.704 [sci2:NeedComms:C](DEBUG): Initialize ReadDataComponent to sense time_fix
2018-09-24T19:18:55.073Z,1537816735.073 [RDI_Pathfinder](ERROR): Failed to parse:Pathfinder
2018-09-24T19:19:15.451Z,1537816755.451 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:19:41.458Z,1537816781.458 [NAL9602](INFO): GPS fix at 20180924T191932: (36.851911, -121.928452)
2018-09-24T19:19:41.525Z,1537816781.525 [sci2:NeedComms:C] Stopped
2018-09-24T19:19:41.526Z,1537816781.526 [sci2:NeedComms:D] Running Loop=1
2018-09-24T19:19:41.911Z,1537816781.911 [sci2:NeedComms:D](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-24T19:19:53.266Z,1537816793.266 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-32768,V
2018-09-24T19:20:02.857Z,1537816802.857 [NAL9602](INFO): SBD MO Status=1, MOMSN=1588, MT Status=0, MTMSN=0
2018-09-24T19:20:02.905Z,1537816802.905 [NAL9602](INFO): Sent 62 bytes from file Logs/20180924T174057/Courier0039.lzma
2018-09-24T19:20:02.905Z,1537816802.905 [NAL9602](INFO): Packets left to send: 0
2018-09-24T19:20:02.907Z,1537816802.907 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T174057/Courier0039.lzma.parts/0000.sbd
2018-09-24T19:20:02.907Z,1537816802.907 [NAL9602](DEBUG): Completed sending Logs/20180924T174057/Courier0039.lzma
2018-09-24T19:20:14.628Z,1537816814.628 [NAL9602](INFO): SBD MO Status=1, MOMSN=1589, MT Status=0, MTMSN=0
2018-09-24T19:20:14.685Z,1537816814.685 [NAL9602](INFO): Sent 332 bytes from file Logs/20180924T174057/Express0040.lzma
2018-09-24T19:20:14.685Z,1537816814.685 [NAL9602](INFO): Packets left to send: 1
2018-09-24T19:20:14.687Z,1537816814.687 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T174057/Express0040.lzma.parts/0001.sbd
2018-09-24T19:20:18.006Z,1537816818.006 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:20:36.384Z,1537816836.384 [NAL9602](INFO): SBD MO Status=1, MOMSN=1590, MT Status=0, MTMSN=0
2018-09-24T19:20:36.455Z,1537816836.455 [NAL9602](INFO): Sent 193 bytes from file Logs/20180924T174057/Express0040.lzma
2018-09-24T19:20:36.455Z,1537816836.455 [NAL9602](INFO): Packets left to send: 0
2018-09-24T19:20:36.456Z,1537816836.456 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T174057/Express0040.lzma.parts/0000.sbd
2018-09-24T19:20:36.457Z,1537816836.457 [NAL9602](DEBUG): Completed sending Logs/20180924T174057/Express0040.lzma
2018-09-24T19:20:45.984Z,1537816845.984 [NAL9602](INFO): SBD MO Status=0, MOMSN=1591, MT Status=0, MTMSN=0
2018-09-24T19:20:56.532Z,1537816856.532 [NAL9602](INFO): SBD MO Status=1, MOMSN=1592, MT Status=0, MTMSN=0
2018-09-24T19:20:56.603Z,1537816856.603 [NAL9602](INFO): Sent 25 bytes from file Logs/20180924T174057/Courier0042.lzma
2018-09-24T19:20:56.603Z,1537816856.603 [NAL9602](INFO): Packets left to send: 0
2018-09-24T19:20:56.605Z,1537816856.605 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T174057/Courier0042.lzma.parts/0000.sbd
2018-09-24T19:20:56.605Z,1537816856.605 [NAL9602](DEBUG): Completed sending Logs/20180924T174057/Courier0042.lzma
2018-09-24T19:21:03.546Z,1537816863.546 [NAL9602](INFO): SBD MO Status=1, MOMSN=1593, MT Status=0, MTMSN=0
2018-09-24T19:21:03.601Z,1537816863.601 [NAL9602](INFO): Sent 168 bytes from file Logs/20180924T174057/Express0043.lzma
2018-09-24T19:21:03.602Z,1537816863.602 [NAL9602](INFO): Packets left to send: 0
2018-09-24T19:21:03.603Z,1537816863.603 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T174057/Express0043.lzma.parts/0000.sbd
2018-09-24T19:21:03.603Z,1537816863.603 [NAL9602](DEBUG): Completed sending Logs/20180924T174057/Express0043.lzma
2018-09-24T19:21:09.952Z,1537816869.952 [NAL9602](INFO): SBD MO Status=0, MOMSN=1594, MT Status=0, MTMSN=0
2018-09-24T19:21:10.142Z,1537816870.142 [sci2:NeedComms:D] Stopped
2018-09-24T19:21:10.143Z,1537816870.143 [sci2:NeedComms:E] Running Loop=1
2018-09-24T19:21:10.411Z,1537816870.411 [sci2:NeedComms:E](DEBUG): Initialize ReadDataComponent to sense time_fix
2018-09-24T19:21:12.406Z,1537816872.406 [NAL9602](INFO): GPS fix at 20180924T192103: (36.852011, -121.928357)
2018-09-24T19:21:12.558Z,1537816872.558 [sci2:NeedComms:E] Stopped
2018-09-24T19:21:12.559Z,1537816872.559 [sci2:NeedComms](INFO): Completed sci2:NeedComms
2018-09-24T19:21:12.559Z,1537816872.559 [sci2:NeedComms] Stopped
2018-09-24T19:21:12.559Z,1537816872.559 [sci2:NeedComms](DEBUG): Aggregate::uninitialize sci2:NeedComms
2018-09-24T19:21:12.560Z,1537816872.560 [sci2:NeedComms:B.GoToSurface] Stopped
2018-09-24T19:21:12.560Z,1537816872.560 [sci2:NeedComms:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-24T19:21:12.850Z,1537816872.850 [sci2:StartingMission](INFO): Completed sci2:StartingMission
2018-09-24T19:21:12.850Z,1537816872.850 [sci2:StartingMission] Stopped
2018-09-24T19:21:12.850Z,1537816872.850 [sci2:StartingMission](DEBUG): Aggregate::uninitialize sci2:StartingMission
2018-09-24T19:21:12.851Z,1537816872.851 [sci2:Lap] Running Loop=1
2018-09-24T19:21:12.851Z,1537816872.851 [sci2:Lap](DEBUG): Aggregate::initialize sci2:Lap
2018-09-24T19:21:12.851Z,1537816872.851 [sci2:Lap:Wpt1] Running Loop=1
2018-09-24T19:21:12.851Z,1537816872.851 [sci2:Lap:Wpt1](DEBUG): Aggregate::initialize sci2:Lap:Wpt1
2018-09-24T19:21:12.851Z,1537816872.851 [sci2:Lap:Wpt1:A.Waypoint] Running Loop=1
2018-09-24T19:21:12.851Z,1537816872.851 [sci2:Lap:Wpt1:A.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-24T19:21:15.170Z,1537816875.170 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-24T19:21:15.170Z,1537816875.170 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-3268,-32768,-32768,V
2018-09-24T19:21:16.340Z,1537816876.340 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:21:28.230Z,1537816888.230 [Radio_Surface](INFO): Powering down
2018-09-24T19:21:44.747Z,1537816904.747 [NAL9602](INFO): Powering down
2018-09-24T19:21:52.388Z,1537816912.388 [BPC1](INFO): Calculating totals. Valid battery stick count: 56. Valid reserve battery stick count: 6.
2018-09-24T19:22:05.180Z,1537816925.180 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-24T19:22:05.180Z,1537816925.180 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-3278,-32768,-32768,V
2018-09-24T19:22:16.748Z,1537816936.748 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:22:55.171Z,1537816975.171 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-24T19:22:55.171Z,1537816975.171 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092412283212,35.0, -0.1, 0.0,14
2018-09-24T19:23:05.178Z,1537816985.178 [RDI_Pathfinder](ERROR): only read 2 of 5 data items
2018-09-24T19:23:05.178Z,1537816985.178 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768-32768,V
2018-09-24T19:23:16.747Z,1537816996.747 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:23:45.165Z,1537817025.165 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-24T19:23:45.166Z,1537817025.166 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092412292212,35.0, -0.1, 48.9, 0
2018-09-24T19:23:56.803Z,1537817036.803 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for altitude
2018-09-24T19:23:56.803Z,1537817036.803 [RDI_Pathfinder](ERROR): Failed to parse:
:BD, +0.00, +0.00, , 0.00,302.00
2018-09-24T19:24:05.179Z,1537817045.179 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-24T19:24:05.180Z,1537817045.180 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-3278,-32768,-32768,V
2018-09-24T19:24:16.750Z,1537817056.750 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:25:17.140Z,1537817117.140 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:25:35.172Z,1537817135.172 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-24T19:25:35.173Z,1537817135.173 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768V
2018-09-24T19:25:37.985Z,1537817137.985 [RDI_Pathfinder](ERROR): Failed to parse:
0e8d,0ffe, -0.175, 0.000
2018-09-24T19:26:06.804Z,1537817166.804 [RDI_Pathfinder](ERROR): Unknown system health message
2018-09-24T19:26:06.804Z,1537817166.804 [RDI_Pathfinder] Hardware Fault, FailCount= 1
2018-09-24T19:26:06.804Z,1537817166.804 [RDI_Pathfinder](ERROR): Hardware Fault
2018-09-24T19:26:07.073Z,1537817167.073 [CBIT](ERROR): Hardware Fault in component: RDI_Pathfinder
2018-09-24T19:26:07.233Z,1537817167.233 [RDI_Pathfinder](INFO): Powering down
2018-09-24T19:26:08.085Z,1537817168.085 [CBIT](INFO): Clearing failed state for component RDI_Pathfinder
2018-09-24T19:26:08.085Z,1537817168.085 [RDI_Pathfinder] No Fault, FailCount= 0
2018-09-24T19:26:17.140Z,1537817177.140 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:26:21.562Z,1537817181.562 [RDI_Pathfinder](ERROR): Failed to parse:Pathfinder
2018-09-24T19:27:17.145Z,1537817237.145 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:28:17.188Z,1537817297.188 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:28:18.824Z,1537817298.824 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-24T19:28:18.824Z,1537817298.824 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092412335561,35.0, -0.1, 0.0,144
2018-09-24T19:28:48.822Z,1537817328.822 [RDI_Pathfinder](ERROR): Failed to parse:
:HM,G,D,0e8d,0ffe,*13.596,*-0.169,*0.000
2018-09-24T19:29:17.588Z,1537817357.588 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:30:17.592Z,1537817417.592 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:30:38.835Z,1537817438.835 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-24T19:30:38.835Z,1537817438.835 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092412361561,35.0, -0.1, 0.0, 0
2018-09-24T19:31:08.468Z,1537817468.468 [RDI_Pathfinder](ERROR): Failed to parse:
:HM,G,D,0e8d,0fff,*13.556,*-0.177,*0.000
2018-09-24T19:31:18.391Z,1537817478.391 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:32:18.394Z,1537817538.394 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:33:00.326Z,1537817580.326 [WetLabsSeaOWL_UV_A](DEBUG): Error parsing data: SEAOWLA2K-019 3853 313 2711 2711 2675 222 1772 1772 3297 3297 75
2018-09-24T19:33:18.403Z,1537817598.403 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:34:18.788Z,1537817658.788 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:34:31.612Z,1537817671.612 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-24T19:34:31.613Z,1537817671.613 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092412400861,35.0, -0.32768,-32768,V
2018-09-24T19:35:18.791Z,1537817718.791 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:36:15.630Z,1537817775.630 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-24T19:36:15.630Z,1537817775.630 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-3768,-32768,V
2018-09-24T19:36:18.802Z,1537817778.802 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:37:19.191Z,1537817839.191 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:38:19.189Z,1537817899.189 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:38:55.643Z,1537817935.643 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-24T19:38:55.643Z,1537817935.643 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092412443261,35.0, -0.,1448.9, 0
2018-09-24T19:39:19.615Z,1537817959.615 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:39:43.630Z,1537817983.630 [RDI_Pathfinder](ERROR): Failed to parse:
:HM,G,D,0e8d,0ffe, 13.697, -0.162, 0.000
2018-09-24T19:40:19.988Z,1537818019.988 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:41:19.989Z,1537818079.989 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:42:02.476Z,1537818122.476 [sci2:NeedComms] Running Loop=1
2018-09-24T19:42:02.476Z,1537818122.476 [sci2:NeedComms](DEBUG): Aggregate::initialize sci2:NeedComms
2018-09-24T19:42:02.476Z,1537818122.476 [sci2:NeedComms:B.GoToSurface] Running Loop=1
2018-09-24T19:42:02.476Z,1537818122.476 [sci2:NeedComms:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-24T19:42:02.481Z,1537818122.481 [sci2:NeedComms:B.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-24T19:42:02.481Z,1537818122.481 [sci2:NeedComms:B.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-24T19:42:02.482Z,1537818122.482 [sci2:NeedComms:B.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-24T19:42:02.482Z,1537818122.482 [sci2:NeedComms:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-24T19:42:02.483Z,1537818122.483 [sci2:NeedComms:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-24T19:42:02.483Z,1537818122.483 [sci2:NeedComms:A] Running Loop=1
2018-09-24T19:42:02.486Z,1537818122.486 [sci2:NeedComms:A](INFO): last time_fix was: 1537816863.000000 second since 1970/01/01T00:00:00Z
2018-09-24T19:42:02.486Z,1537818122.486 [sci2:NeedComms:A] Stopped
2018-09-24T19:42:20.544Z,1537818140.544 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:42:30.982Z,1537818150.982 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-24T19:42:30.982Z,1537818150.982 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092412480761,31, 0.0,1448.9, 0
2018-09-24T19:43:08.879Z,1537818188.879 [sci2:NeedComms:C] Running Loop=1
2018-09-24T19:43:09.126Z,1537818189.126 [Radio_Surface](INFO): Powering up
2018-09-24T19:43:09.618Z,1537818189.618 [NAL9602](INFO): Powering up
2018-09-24T19:43:14.642Z,1537818194.642 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for altitude
2018-09-24T19:43:14.642Z,1537818194.642 [RDI_Pathfinder](ERROR): Failed to parse:
:BD, , +0.00, +0.00,1012.96
2018-09-24T19:43:20.614Z,1537818200.614 [NAL9602](INFO): NAL9602 initialized
2018-09-24T19:43:20.992Z,1537818200.992 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:43:22.189Z,1537818202.189 [BuoyancyServo](ERROR): getPosition uart error serial timeout
2018-09-24T19:43:22.189Z,1537818202.189 [BuoyancyServo](FAULT): Buoyancy getPosition uart error.serial timeout
2018-09-24T19:43:22.189Z,1537818202.189 [BuoyancyServo] Communications Fault, FailCount= 1
2018-09-24T19:43:22.189Z,1537818202.189 [BuoyancyServo](ERROR): Communications Fault
2018-09-24T19:43:22.228Z,1537818202.228 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-09-24T19:43:22.382Z,1537818202.382 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-24T19:43:22.383Z,1537818202.383 [BuoyancyServo](INFO): Powering down
2018-09-24T19:43:23.959Z,1537818203.959 [BuoyancyServo](FAULT): LCB fault: Current Limiter Activated.
2018-09-24T19:43:23.959Z,1537818203.959 [BuoyancyServo] Hardware Fault, FailCount= 1
2018-09-24T19:43:23.959Z,1537818203.959 [BuoyancyServo](ERROR): Hardware Fault
2018-09-24T19:43:24.409Z,1537818204.409 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-24T19:43:24.410Z,1537818204.410 [BuoyancyServo] No Fault, FailCount= 1
2018-09-24T19:43:24.730Z,1537818204.730 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-24T19:43:24.853Z,1537818204.853 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-24T19:44:13.867Z,1537818253.867 [NAL9602](INFO): SBD MO Status=2, MOMSN=1595, MT Status=2, MTMSN=0
2018-09-24T19:44:13.868Z,1537818253.868 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-24T19:44:21.056Z,1537818261.056 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:44:57.464Z,1537818297.464 [NAL9602](INFO): SBD MO Status=2, MOMSN=1595, MT Status=2, MTMSN=0
2018-09-24T19:44:57.464Z,1537818297.464 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-24T19:45:21.456Z,1537818321.456 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:45:34.660Z,1537818334.660 [NAL9602](INFO): SBD MO Status=2, MOMSN=1595, MT Status=2, MTMSN=0
2018-09-24T19:45:34.660Z,1537818334.660 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-24T19:45:52.265Z,1537818352.265 [NAL9602](INFO): SBD MO Status=2, MOMSN=1595, MT Status=2, MTMSN=0
2018-09-24T19:45:52.265Z,1537818352.265 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-24T19:46:21.469Z,1537818381.469 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:46:31.068Z,1537818391.068 [NAL9602](INFO): SBD MO Status=2, MOMSN=1595, MT Status=2, MTMSN=0
2018-09-24T19:46:31.068Z,1537818391.068 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-24T19:46:43.469Z,1537818403.469 [NAL9602](IMPORTANT): SBD MO Status=0, MOMSN=1595, MT Status=1, MTMSN=81
2018-09-24T19:46:43.470Z,1537818403.470 [NAL9602](INFO): Data available in MT queue
2018-09-24T19:46:43.949Z,1537818403.949 [NAL9602](INFO): Received command:stop
2018-09-24T19:46:44.030Z,1537818404.030 [CommandLine](IMPORTANT): got command stop
2018-09-24T19:46:44.030Z,1537818404.030 [Supervisor](INFO): Stop Mission called by CommandLine::commandStop
2018-09-24T19:46:44.344Z,1537818404.344 [MissionManager](INFO): MissionManager is completed.
2018-09-24T19:46:44.344Z,1537818404.344 [MissionManager](INFO): Uninitializing Mission sci2
2018-09-24T19:46:44.344Z,1537818404.344 [sci2] Stopped
2018-09-24T19:46:44.344Z,1537818404.344 [sci2](DEBUG): Aggregate::uninitialize sci2
2018-09-24T19:46:44.344Z,1537818404.344 [sci2:Science] Stopped
2018-09-24T19:46:44.344Z,1537818404.344 [sci2:Science](DEBUG): Aggregate::uninitialize sci2:Science
2018-09-24T19:46:44.344Z,1537818404.344 [sci2:Science:G] Stopped
2018-09-24T19:46:44.344Z,1537818404.344 [sci2:Science:Read_Oil] Stopped
2018-09-24T19:46:44.344Z,1537818404.344 [sci2:Science:PeakDetectChl] Stopped
2018-09-24T19:46:44.349Z,1537818404.349 [sci2:Science:PeakDetectChl](DEBUG): Aggregate::uninitialize sci2:Science:PeakDetectChl
2018-09-24T19:46:44.349Z,1537818404.349 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2018-09-24T19:46:44.349Z,1537818404.349 [sci2:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-24T19:46:44.349Z,1537818404.349 [sci2:NeedComms] Stopped
2018-09-24T19:46:44.349Z,1537818404.349 [sci2:NeedComms](DEBUG): Aggregate::uninitialize sci2:NeedComms
2018-09-24T19:46:44.349Z,1537818404.349 [sci2:NeedComms:B.GoToSurface] Stopped
2018-09-24T19:46:44.349Z,1537818404.349 [sci2:NeedComms:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-24T19:46:44.349Z,1537818404.349 [sci2:NeedComms:C] Stopped
2018-09-24T19:46:44.350Z,1537818404.350 [sci2:StandardEnvelopes] Stopped
2018-09-24T19:46:44.350Z,1537818404.350 [sci2:StandardEnvelopes](DEBUG): Aggregate::uninitialize sci2:StandardEnvelopes
2018-09-24T19:46:44.350Z,1537818404.350 [sci2:StandardEnvelopes:A.AltitudeEnvelope] Stopped
2018-09-24T19:46:44.350Z,1537818404.350 [sci2:StandardEnvelopes:A.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-24T19:46:44.350Z,1537818404.350 [sci2:StandardEnvelopes:B.DepthEnvelope] Stopped
2018-09-24T19:46:44.350Z,1537818404.350 [sci2:StandardEnvelopes:B.DepthEnvelope](DEBUG): Uninitialize.
2018-09-24T19:46:44.350Z,1537818404.350 [sci2:StandardEnvelopes:C.OffshoreEnvelope] Stopped
2018-09-24T19:46:44.350Z,1537818404.350 [sci2:StandardEnvelopes:C.OffshoreEnvelope](DEBUG): Uninitialize OffshoreEnvelopeComponent.
2018-09-24T19:46:44.350Z,1537818404.350 [sci2:I.Pitch] Stopped
2018-09-24T19:46:44.350Z,1537818404.350 [sci2:J.Buoyancy] Stopped
2018-09-24T19:46:44.350Z,1537818404.350 [sci2:J.Buoyancy](DEBUG): Uninitialize Buoyancy Component.
2018-09-24T19:46:44.351Z,1537818404.351 [sci2:K.SetSpeed] Stopped
2018-09-24T19:46:44.351Z,1537818404.351 [sci2:K.SetSpeed](DEBUG): Uninitialize.
2018-09-24T19:46:44.351Z,1537818404.351 [sci2:L.DepthEnvelope] Stopped
2018-09-24T19:46:44.351Z,1537818404.351 [sci2:L.DepthEnvelope](DEBUG): Uninitialize.
2018-09-24T19:46:44.351Z,1537818404.351 [sci2:M.AltitudeEnvelope] Stopped
2018-09-24T19:46:44.351Z,1537818404.351 [sci2:M.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-24T19:46:44.351Z,1537818404.351 [sci2:N.YoYo] Stopped
2018-09-24T19:46:44.351Z,1537818404.351 [sci2:N.YoYo](DEBUG): Uninitialize YoYoComponent.
2018-09-24T19:46:44.351Z,1537818404.351 [sci2:Lap] Stopped
2018-09-24T19:46:44.351Z,1537818404.351 [sci2:Lap](DEBUG): Aggregate::uninitialize sci2:Lap
2018-09-24T19:46:44.351Z,1537818404.351 [sci2:Lap:Wpt1] Stopped
2018-09-24T19:46:44.352Z,1537818404.352 [sci2:Lap:Wpt1](DEBUG): Aggregate::uninitialize sci2:Lap:Wpt1
2018-09-24T19:46:44.352Z,1537818404.352 [sci2:Lap:Wpt1:A.Waypoint] Stopped
2018-09-24T19:46:44.352Z,1537818404.352 [sci2:Lap:Wpt1:A.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-24T19:46:44.609Z,1537818404.609 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-24T19:46:44.713Z,1537818404.713 [MissionManager](IMPORTANT): Started mission Default
2018-09-24T19:46:44.713Z,1537818404.713 [Default] Running Loop=1
2018-09-24T19:46:44.713Z,1537818404.713 [Default](DEBUG): Aggregate::initialize Default
2018-09-24T19:46:44.713Z,1537818404.713 [Default:B.GoToSurface] Running Loop=1
2018-09-24T19:46:44.713Z,1537818404.713 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-24T19:46:44.714Z,1537818404.714 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-24T19:46:44.714Z,1537818404.714 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-24T19:46:44.714Z,1537818404.714 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-24T19:46:44.715Z,1537818404.715 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-24T19:46:44.715Z,1537818404.715 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-24T19:46:44.716Z,1537818404.716 [Default:A.Wait] Running Loop=1
2018-09-24T19:46:44.716Z,1537818404.716 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-24T19:46:45.063Z,1537818405.063 [NAL9602](INFO): GPS fix at 20180924T194635: (36.850393, -121.916005)
2018-09-24T19:46:45.120Z,1537818405.120 [UniversalFixResidualReporter](INFO): Fix residual: 10.6 %DT, over the last 1250.0 m. Residual distance 132.4 m at bearing 147.1 degrees. Fix at (36.8504, -121.9160) with 1113.7 m made good.
2018-09-24T19:46:57.913Z,1537818417.913 [Default:A.Wait](INFO): Done Waiting.
2018-09-24T19:46:57.913Z,1537818417.913 [Default:A.Wait] Stopped
2018-09-24T19:46:57.913Z,1537818417.913 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-24T19:46:58.313Z,1537818418.313 [Default:CheckIn] Running Loop=1
2018-09-24T19:46:58.313Z,1537818418.313 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-24T19:46:58.313Z,1537818418.313 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-24T19:47:00.262Z,1537818420.262 [NAL9602](INFO): GPS fix at 20180924T194650: (36.850398, -121.916003)
2018-09-24T19:47:00.330Z,1537818420.330 [Default:CheckIn:Read_GPS] Stopped
2018-09-24T19:47:00.330Z,1537818420.330 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-24T19:47:22.024Z,1537818442.024 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:47:22.428Z,1537818442.428 [NAL9602](INFO): SBD MO Status=1, MOMSN=1596, MT Status=0, MTMSN=0
2018-09-24T19:47:22.485Z,1537818442.485 [NAL9602](INFO): Sent 213 bytes from file Logs/20180924T174057/Courier0045.lzma
2018-09-24T19:47:22.485Z,1537818442.485 [NAL9602](INFO): Packets left to send: 0
2018-09-24T19:47:22.487Z,1537818442.487 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T174057/Courier0045.lzma.parts/0000.sbd
2018-09-24T19:47:22.487Z,1537818442.487 [NAL9602](DEBUG): Completed sending Logs/20180924T174057/Courier0045.lzma
2018-09-24T19:47:43.404Z,1537818463.404 [NAL9602](INFO): SBD MO Status=1, MOMSN=1597, MT Status=0, MTMSN=0
2018-09-24T19:47:43.461Z,1537818463.461 [NAL9602](INFO): Sent 332 bytes from file Logs/20180924T174057/Express0046.lzma
2018-09-24T19:47:43.461Z,1537818463.461 [NAL9602](INFO): Packets left to send: 7
2018-09-24T19:47:43.463Z,1537818463.463 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T174057/Express0046.lzma.parts/0007.sbd
2018-09-24T19:47:51.552Z,1537818471.552 [NAL9602](INFO): SBD MO Status=1, MOMSN=1598, MT Status=0, MTMSN=0
2018-09-24T19:47:51.605Z,1537818471.605 [NAL9602](INFO): Sent 332 bytes from file Logs/20180924T174057/Express0046.lzma
2018-09-24T19:47:51.605Z,1537818471.605 [NAL9602](INFO): Packets left to send: 6
2018-09-24T19:47:51.606Z,1537818471.606 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T174057/Express0046.lzma.parts/0006.sbd
2018-09-24T19:48:04.524Z,1537818484.524 [NAL9602](INFO): SBD MO Status=1, MOMSN=1599, MT Status=0, MTMSN=0
2018-09-24T19:48:04.573Z,1537818484.573 [NAL9602](INFO): Sent 332 bytes from file Logs/20180924T174057/Express0046.lzma
2018-09-24T19:48:04.573Z,1537818484.573 [NAL9602](INFO): Packets left to send: 5
2018-09-24T19:48:04.574Z,1537818484.574 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T174057/Express0046.lzma.parts/0005.sbd
2018-09-24T19:48:14.676Z,1537818494.676 [NAL9602](INFO): SBD MO Status=1, MOMSN=1600, MT Status=0, MTMSN=0
2018-09-24T19:48:14.725Z,1537818494.725 [NAL9602](INFO): Sent 332 bytes from file Logs/20180924T174057/Express0046.lzma
2018-09-24T19:48:14.725Z,1537818494.725 [NAL9602](INFO): Packets left to send: 4
2018-09-24T19:48:14.727Z,1537818494.727 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T174057/Express0046.lzma.parts/0004.sbd
2018-09-24T19:48:22.008Z,1537818502.008 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:48:25.616Z,1537818505.616 [NAL9602](INFO): SBD MO Status=1, MOMSN=1601, MT Status=0, MTMSN=0
2018-09-24T19:48:25.669Z,1537818505.669 [NAL9602](INFO): Sent 332 bytes from file Logs/20180924T174057/Express0046.lzma
2018-09-24T19:48:25.669Z,1537818505.669 [NAL9602](INFO): Packets left to send: 3
2018-09-24T19:48:25.671Z,1537818505.671 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T174057/Express0046.lzma.parts/0003.sbd
2018-09-24T19:48:37.348Z,1537818517.348 [NAL9602](INFO): SBD MO Status=1, MOMSN=1602, MT Status=0, MTMSN=0
2018-09-24T19:48:37.401Z,1537818517.401 [NAL9602](INFO): Sent 332 bytes from file Logs/20180924T174057/Express0046.lzma
2018-09-24T19:48:37.401Z,1537818517.401 [NAL9602](INFO): Packets left to send: 2
2018-09-24T19:48:37.403Z,1537818517.403 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T174057/Express0046.lzma.parts/0002.sbd
2018-09-24T19:48:53.944Z,1537818533.944 [NAL9602](INFO): SBD MO Status=2, MOMSN=1603, MT Status=2, MTMSN=0
2018-09-24T19:48:53.944Z,1537818533.944 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-24T19:49:04.256Z,1537818544.256 [RDI_Pathfinder](ERROR): only read 1 of 1 data item for altitude
2018-09-24T19:49:04.256Z,1537818544.256 [RDI_Pathfinder](ERROR): Failed to parse:
:HM,G0ffe, 13.784, -0.160, 0.000
2018-09-24T19:49:22.588Z,1537818562.588 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:49:24.000Z,1537818565.000 [NAL9602](INFO): SBD MO Status=1, MOMSN=1603, MT Status=0, MTMSN=0
2018-09-24T19:49:25.050Z,1537818565.050 [NAL9602](INFO): Sent 332 bytes from file Logs/20180924T174057/Express0046.lzma
2018-09-24T19:49:25.050Z,1537818565.050 [NAL9602](INFO): Packets left to send: 1
2018-09-24T19:49:25.051Z,1537818565.051 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T174057/Express0046.lzma.parts/0001.sbd
2018-09-24T19:49:34.742Z,1537818574.742 [NAL9602](INFO): SBD MO Status=1, MOMSN=1604, MT Status=0, MTMSN=0
2018-09-24T19:49:34.797Z,1537818574.797 [NAL9602](INFO): Sent 199 bytes from file Logs/20180924T174057/Express0046.lzma
2018-09-24T19:49:34.797Z,1537818574.797 [NAL9602](INFO): Packets left to send: 0
2018-09-24T19:49:34.799Z,1537818574.799 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T174057/Express0046.lzma.parts/0000.sbd
2018-09-24T19:49:34.799Z,1537818574.799 [NAL9602](DEBUG): Completed sending Logs/20180924T174057/Express0046.lzma
2018-09-24T19:49:42.740Z,1537818582.740 [NAL9602](INFO): SBD MO Status=0, MOMSN=1605, MT Status=0, MTMSN=0
2018-09-24T19:50:00.884Z,1537818600.884 [NAL9602](INFO): SBD MO Status=1, MOMSN=1606, MT Status=0, MTMSN=0
2018-09-24T19:50:00.933Z,1537818600.933 [NAL9602](INFO): Sent 25 bytes from file Logs/20180924T174057/Courier0048.lzma
2018-09-24T19:50:00.933Z,1537818600.933 [NAL9602](INFO): Packets left to send: 0
2018-09-24T19:50:00.935Z,1537818600.935 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T174057/Courier0048.lzma.parts/0000.sbd
2018-09-24T19:50:00.935Z,1537818600.935 [NAL9602](DEBUG): Completed sending Logs/20180924T174057/Courier0048.lzma
2018-09-24T19:50:11.428Z,1537818611.428 [NAL9602](INFO): SBD MO Status=1, MOMSN=1607, MT Status=0, MTMSN=0
2018-09-24T19:50:11.481Z,1537818611.481 [NAL9602](INFO): Sent 70 bytes from file Logs/20180924T174057/Express0049.lzma
2018-09-24T19:50:11.481Z,1537818611.481 [NAL9602](INFO): Packets left to send: 0
2018-09-24T19:50:11.484Z,1537818611.484 [NAL9602](DEBUG): Stored copy of sent data in Logs/20180924T174057/Express0049.lzma.parts/0000.sbd
2018-09-24T19:50:11.484Z,1537818611.484 [NAL9602](DEBUG): Completed sending Logs/20180924T174057/Express0049.lzma
2018-09-24T19:50:20.232Z,1537818620.232 [NAL9602](INFO): SBD MO Status=0, MOMSN=1608, MT Status=0, MTMSN=0
2018-09-24T19:50:20.332Z,1537818620.332 [Default:CheckIn:Read_Iridium] Stopped
2018-09-24T19:50:20.332Z,1537818620.332 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-24T19:50:20.333Z,1537818620.333 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-24T19:50:22.624Z,1537818622.624 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-24T19:50:50.634Z,1537818650.634 [NAL9602](INFO): Powering down
2018-09-24T19:51:07.692Z,1537818667.692 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003328
2018-09-24T19:52:00.932Z,1537818720.932 [RDI_Pathfinder](ERROR): Failed to parse:
2018-09-24T19:54:31.180Z,1537818871.180 [CommandLine](IMPORTANT): got command show variable peakChl
2018-09-24T19:54:45.011Z,1537818885.011 [CommandLine](IMPORTANT): got command run ./Missions/Insert/Science_yz.xml
2018-09-24T19:54:45.012Z,1537818885.012 [MissionManager](INFO): Loading Mission: ./Missions/Insert/Science_yz.xml
2018-09-24T19:54:45.314Z,1537818885.314 [MissionManager](INFO): DefineArg Science.SampleISUS = 0 bool
2018-09-24T19:54:45.326Z,1537818885.326 [MissionManager](INFO): DefineArg Science.SampleISUSmaxPitch = 60.000000 arcdeg
2018-09-24T19:54:45.330Z,1537818885.330 [MissionManager](INFO): DefineArg Science.SampleISUSminPitch = -60.000000 arcdeg
2018-09-24T19:54:45.342Z,1537818885.342 [MissionManager](INFO): DefineArg Science.PeakDetectChlActive = 0 bool
2018-09-24T19:54:45.349Z,1537818885.349 [MissionManager](INFO): DefineArg Science.HighestChlPeakReportActive = 0 bool
2018-09-24T19:54:45.352Z,1537818885.352 [MissionManager](INFO): DefineArg Science.PatchTracking = 1 bool
2018-09-24T19:54:45.360Z,1537818885.360 [MissionManager](INFO): DefineArg Science.FilterWidthHorizontal = 3.000000 count
2018-09-24T19:54:45.368Z,1537818885.368 [MissionManager](INFO): DefineArg Science.NumProfilesSlidingwindow = 100.000000 count
2018-09-24T19:54:45.376Z,1537818885.376 [MissionManager](INFO): DefineArg Science.OffPeakFractionHorizontal = 80.000000 %
2018-09-24T19:54:45.380Z,1537818885.380 [MissionManager](INFO): DefineArg Science.PeakDetectNO3Active = 0 bool
2018-09-24T19:54:45.397Z,1537818885.397 [MissionManager](INFO): DefineArg Science.PeakDetectOilActive = 0 bool
2018-09-24T19:54:45.400Z,1537818885.400 [MissionManager](INFO): DefineArg Science.UpwardDerivativeOfTemperatureActive = 0 bool
2018-09-24T19:54:45.404Z,1537818885.404 [MissionManager](INFO): DefineArg Science.EnabledAanderaaO2 = 0.000000 bool
2018-09-24T19:54:45.421Z,1537818885.421 [MissionManager](INFO): DefineArg Science.EnabledNeilBrown = 0.000000 bool
2018-09-24T19:54:45.425Z,1537818885.425 [MissionManager](INFO): DefineArg Science.EnabledSeabird = 0.000000 bool
2018-09-24T19:54:45.450Z,1537818885.450 [MissionManager](INFO): DefineArg Science.EnabledTurbulence_NPS = 0.000000 bool
2018-09-24T19:54:45.454Z,1537818885.454 [MissionManager](INFO): DefineArg Science.EnabledWetLabsBB2FL = 0.000000 bool
2018-09-24T19:54:45.458Z,1537818885.458 [MissionManager](INFO): DefineArg Science.EnabledWetLabsSeaOWL_UV_A = 1.000000 bool
2018-09-24T19:54:45.475Z,1537818885.475 [MissionManager](INFO): DefineArg Science.EnabledISUS = 0.000000 bool
2018-09-24T19:54:45.478Z,1537818885.478 [MissionManager](INFO): DefineArg Science.LowPassWindowLength = 20.000000 count
2018-09-24T19:54:45.482Z,1537818885.482 [MissionManager](INFO): DefineArg Science.PeakChlShallowBound = 10.000000 m
2018-09-24T19:54:45.506Z,1537818885.506 [MissionManager](INFO): DefineArg Science.PeakChlDeepBound = 20.000000 m
2018-09-24T19:54:45.509Z,1537818885.509 [MissionManager](INFO): DefineOutput Science.PeakChl = 0.000000 ug/l
2018-09-24T19:54:45.513Z,1537818885.513 [MissionManager](INFO): DefineOutput Science.PeakChlDepth = 0.000000 m
2018-09-24T19:54:45.539Z,1537818885.539 [MissionManager](INFO): DefineOutput Science.PeakChlTemperature = 0.000000 degC
2018-09-24T19:54:45.549Z,1537818885.549 [MissionManager](INFO): DefineOutput Science.PeakChlLatitude = nan arcdeg
2018-09-24T19:54:45.553Z,1537818885.553 [MissionManager](INFO): DefineOutput Science.PeakChlLongitude = nan arcdeg
2018-09-24T19:54:45.556Z,1537818885.556 [MissionManager](INFO): DefineOutput Science.PeakNO3 = 0.000000 umol/l
2018-09-24T19:54:45.612Z,1537818885.612 [MissionManager](INFO): DefineOutput Science.PeakNO3Depth = 0.000000 m
2018-09-24T19:54:45.615Z,1537818885.615 [MissionManager](INFO): DefineOutput Science.PeakNO3Latitude = nan arcdeg
2018-09-24T19:54:45.663Z,1537818885.663 [MissionManager](INFO): DefineOutput Science.PeakNO3Longitude = nan arcdeg
2018-09-24T19:54:45.667Z,1537818885.667 [MissionManager](INFO): DefineOutput Science.PatchChl = 0.000000 m
2018-09-24T19:54:45.687Z,1537818885.687 [MissionManager](INFO): DefineOutput Science.PatchChlDepth = 0.000000 m
2018-09-24T19:54:45.691Z,1537818885.691 [MissionManager](INFO): DefineOutput Science.PatchChlLatitude = nan arcdeg
2018-09-24T19:54:45.728Z,1537818885.728 [MissionManager](INFO): DefineOutput Science.PatchChlLongitude = nan arcdeg
2018-09-24T19:54:45.732Z,1537818885.732 [MissionManager](INFO): DefineOutput Science.PatchChlDistance = nan m
2018-09-24T19:54:45.736Z,1537818885.736 [MissionManager](INFO): DefineOutput Science.PeakOil = 0.000000 kg/m3
2018-09-24T19:54:45.748Z,1537818885.748 [MissionManager](INFO): DefineOutput Science.PeakOilDepth = 0.000000 m
2018-09-24T19:54:45.751Z,1537818885.751 [MissionManager](INFO): DefineOutput Science.PeakOilLatitude = nan arcdeg
2018-09-24T19:54:45.755Z,1537818885.755 [MissionManager](INFO): DefineOutput Science.PeakOilLongitude = nan arcdeg
2018-09-24T19:54:45.811Z,1537818885.811 [Science:PeakDetectChl:B.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-24T19:54:45.844Z,1537818885.844 [Science:HighestChlPeakReport:B.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-24T19:54:45.893Z,1537818885.893 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-24T19:54:45.929Z,1537818885.929 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-24T19:54:46.031Z,1537818886.031 [MissionManager](DEBUG):
<?xml version="1.0" encoding="UTF-8"?>
<!-- ====================
Generated by TethysL
==================== -->
<Aggregate xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xmlns="Tethys"
xmlns:Units="Tethys/Units"
xmlns:Science="Tethys/Science"
xmlns:Universal="Tethys/Universal"
xmlns:Trigger="Tethys/Trigger"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Science http://okeanids.mbari.org/tethys/Xml/Science.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd
Tethys/Trigger http://okeanids.mbari.org/tethys/Xml/Trigger.xsd"
Id="Science">
<DefineArg Name="SampleISUS"><Description>
Set either this or PeakDetectNO3Active to True in order to sample
Nitrate. EnabledISUS must also be true.
</Description><False/></DefineArg>
<DefineArg Name="SampleISUSmaxPitch"><Description>
Maximum pitch to sample ISUS. (EnabledISUS must also be true.)
</Description><Units:degree/><Value>60.0</Value></DefineArg>
<DefineArg Name="SampleISUSminPitch"><Description>
Minimum pitch to sample ISUS. (EnabledISUS must also be true.)
</Description><Units:degree/><Value>-60.0</Value></DefineArg>
<DefineArg Name="PeakDetectChlActive"><Description>
Turns on peak detection of Cholorphyll.
</Description><False/></DefineArg>
<DefineArg Name="HighestChlPeakReportActive"><Description>
Turns on reporting of the highest peak value on yo-yo profiles in a
horizontal sliding window (of length numProfilesSlidingwindow)
</Description><False/></DefineArg>
<DefineArg Name="PatchTracking"><Description>
If tracking a patch
<!--debug
</Description><False/></DefineArg>
-->
</Description><True/></DefineArg>
<DefineArg Name="FilterWidthHorizontal"><Description>
Width of boxcar filter applied to yoyo-wise chl peaks to pick out the
highest peak.
</Description><Units:count/><Value>3</Value></DefineArg>
<DefineArg Name="NumProfilesSlidingwindow"><Description>
Length of horizontal sliding window. The highest yoyo-wise chl peak
(after low-pass filtering by a filter of length FilterWidthHorizontal)
within this window.
</Description><Units:count/><Value>100</Value></DefineArg>
<DefineArg Name="OffPeakFractionHorizontal"><Description>
When filtered horizontal value is this fraction of the peak, consider it
outside the patch.
</Description><Units:percent/><Value>80</Value></DefineArg>
<DefineArg Name="PeakDetectNO3Active"><Description>
Turns on peak detection of Nitrate (and turns on ISUS).
</Description><False/></DefineArg>
<DefineArg Name="PeakDetectOilActive"><Description>
Turns on peak detection of Dissolved Oil.
</Description><False/></DefineArg>
<DefineArg Name="UpwardDerivativeOfTemperatureActive"><Description>
Turns on seawater temperature derivative.
</Description><False/></DefineArg>
<DefineArg Name="EnabledAanderaaO2"><Description>
Automatically set to True if the Aanderaa O2 sensor is installed. Set to
false to disable reading Aandera O2.
</Description><Science:Aanderaa_O2.loadAtStartup/></DefineArg>
<DefineArg Name="EnabledNeilBrown"><Description>
Automatically set to true if the Neil Brown CTD is enabled. Set to false
to disable reading from the Neil Brown.
</Description><Science:CTD_NeilBrown.loadAtStartup/></DefineArg>
<DefineArg Name="EnabledSeabird"><Description>
Automatically set to true if the CTD is enabled. Set to false to disable
reading from the CTD.
</Description><Science:CTD_Seabird.loadAtStartup/></DefineArg>
<DefineArg Name="EnabledTurbulence_NPS"><Description>
Automatically set to true if the NPS Turbulence sensor is enabled. Set
to false to disable reading from the NPS Turbulence sensor.
</Description><Science:Turbulence_NPS.loadAtStartup/></DefineArg>
<DefineArg Name="EnabledWetLabsBB2FL"><Description>
Automatically set to true if the the WetLabs BB2FL is enabled. Set to
false to disable the WetLabs BB2FL.
</Description><Science:WetLabsBB2FL.loadAtStartup/></DefineArg>
<DefineArg Name="EnabledWetLabsSeaOWL_UV_A"><Description>
Automatically set to true if the the WetLabs SeaOWL UV-A is enabled. Set
to false to disable the WetLabs SeaOWL UV-A.
</Description><Science:WetLabsSeaOWL_UV_A.loadAtStartup/></DefineArg>
<DefineArg Name="EnabledISUS"><Description>
Automatically set to True if ISUS is enabled. Set to false to disable
ISUS.
</Description><Science:ISUS.loadAtStartup/></DefineArg>
<DefineArg Name="LowPassWindowLength"><Description>
Low-pass window length (based on depth sensor sampling interval 0.4
second) for low-pass filtering.
</Description><Units:count/><Value>20</Value></DefineArg>
<DefineArg Name="PeakChlShallowBound"><Description>
Shallow depth bound for detecting chl peak on each descent or ascent
profile.
<!--debug
</Description><Units:meter/><Value>NaN</Value></DefineArg>
-->
</Description><Units:meter/><Value>10</Value></DefineArg>
<DefineArg Name="PeakChlDeepBound"><Description>
Deep depth bound for detecting chl peak on each descent or ascent
profile.
<!--debug
</Description><Units:meter/><Value>NaN</Value></DefineArg>
-->
</Description><Units:meter/><Value>20</Value></DefineArg>
<DefineOutput Name="PeakChl"><Units:microgram_per_liter/><Value>0</Value></DefineOutput>
<DefineOutput Name="PeakChlDepth"><Units:meter/><Value>0</Value></DefineOutput>
<DefineOutput Name="PeakChlTemperature"><Units:celsius/><Value>0</Value></DefineOutput>
<DefineOutput Name="PeakChlLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>
<DefineOutput Name="PeakChlLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>
<DefineOutput Name="PeakNO3"><Units:micromole_per_liter/><Value>0</Value></DefineOutput>
<DefineOutput Name="PeakNO3Depth"><Units:meter/><Value>0</Value></DefineOutput>
<DefineOutput Name="PeakNO3Latitude"><Units:degree/><Value>NaN</Value></DefineOutput>
<DefineOutput Name="PeakNO3Longitude"><Units:degree/><Value>NaN</Value></DefineOutput>
<DefineOutput Name="PatchChl"><Units:meter/><Value>0</Value></DefineOutput>
<DefineOutput Name="PatchChlDepth"><Units:meter/><Value>0</Value></DefineOutput>
<DefineOutput Name="PatchChlLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>
<DefineOutput Name="PatchChlLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>
<DefineOutput Name="PatchChlDistance"><Units:meter/><Value>NaN</Value></DefineOutput>
<DefineOutput Name="PeakOil"><Units:kilogram_per_cubic_meter/><Value>0</Value></DefineOutput>
<DefineOutput Name="PeakOilDepth"><Units:meter/><Value>0</Value></DefineOutput>
<DefineOutput Name="PeakOilLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>
<DefineOutput Name="PeakOilLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>
<Parallel/>
<ReadData Strategy="MinError">
<While>
<Arg Name="EnabledAanderaaO2"/>
</While>
<Universal:mass_concentration_of_oxygen_in_sea_water/>
</ReadData>
<ReadData>
<While>
<Arg Name="EnabledISUS"/>
<And>
<Universal:platform_pitch_angle/>
<Lt>
<Arg Name="SampleISUSmaxPitch"/>
</Lt>
<And>
<Universal:platform_pitch_angle/>
<Gt>
<Arg Name="SampleISUSminPitch"/>
</Gt>
<And>
<Arg Name="SampleISUS"/>
<Or>
<Arg Name="PeakDetectNO3Active"/>
</Or>
</And>
</And>
</And>
</While>
<Universal:mole_concentration_of_nitrate_in_sea_water/>
</ReadData>
<ReadData Strategy="MinError">
<While>
<Arg Name="EnabledNeilBrown"/>
<Or>
<Arg Name="EnabledSeabird"/>
</Or>
</While>
<Universal:sea_water_temperature/>
<Universal:sea_water_salinity/>
</ReadData>
<ReadData Strategy="MinError">
<While>
<Arg Name="EnabledSeabird"/>
</While>
<Science:CTD_Seabird.sea_water_temperature/>
<Science:CTD_Seabird.sea_water_salinity/>
</ReadData>
<ReadData Strategy="MinError">
<While>
<Arg Name="EnabledNeilBrown"/>
<Or>
<Arg Name="EnabledSeabird"/>
</Or>
<And>
<Arg Name="UpwardDerivativeOfTemperatureActive"/>
</And>
</While>
<Universal:upward_derivative_of_sea_water_temperature/>
</ReadData>
<ReadData Strategy="MinError">
<While>
<Arg Name="EnabledTurbulence_NPS"/>
</While>
<Science:Turbulence_NPS.MicroCond/>
</ReadData>
<ReadData Strategy="MinError">
<While>
<Arg Name="EnabledWetLabsBB2FL"/>
<Or>
<Arg Name="PeakDetectChlActive"/>
</Or>
</While>
<Universal:mass_concentration_of_chlorophyll_in_sea_water/>
</ReadData>
<!--debug-->
<ReadData Id="Read_Oil" Strategy="MinError">
<While>
<Arg Name="EnabledWetLabsSeaOWL_UV_A"/>
<Or>
<Arg Name="PeakDetectOilActive"/>
</Or>
<Or>
<Arg Name="PeakDetectChlActive"/>
</Or>
</While>
<Universal:mass_concentration_of_chlorophyll_in_sea_water/>
</ReadData>
<Aggregate Id="PeakDetectChl">
<While>
<Arg Name="PeakDetectChlActive"/>
</While>
<Syslog Severity="Important">Calling peak detect vs depth</Syslog>
<Trigger:PeakDetectVsDepth>
<Sequence/>
<Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mass_concentration_of_chlorophyll_in_sea_water/></Setting>
<Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
<Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakChlShallowBound"/></Setting>
<Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakChlDeepBound"/></Setting>
<OutputArg Name="PeakChl"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
<OutputArg Name="PeakChlDepth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
<OutputArg Name="PeakChlTemperature"><Trigger:PeakDetectVsDepth.peakTemperature/></OutputArg>
<OutputArg Name="PeakChlLatitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
<OutputArg Name="PeakChlLongitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
</Trigger:PeakDetectVsDepth>
<!--debug-->
<Syslog Severity="Important">PeakChl, PeakChlLatitude, PeakChlLongitude = <Arg Name="PeakChl"/><Units:microgram_per_liter/>, <Arg Name="PeakChlLatitude"/><Units:degree/>, <Arg Name="PeakChlLongitude"/><Units:degree/></Syslog>
<SendData Service="Express">
<Arg Name="PeakChl"/><Arg Name="PeakChlDepth"/>
</SendData>
</Aggregate>
<Aggregate Id="HighestChlPeakReport">
<While>
<Arg Name="HighestChlPeakReportActive"/>
</While>
<Syslog Severity="Important">Calling peak detect horizontal</Syslog>
<Trigger:PeakDetectHorizontal>
<Sequence/>
<Setting><Trigger:PeakDetectHorizontal.detectFrom/><Arg Name="PeakChl"/></Setting>
<Setting><Trigger:PeakDetectHorizontal.depthFrom/><Arg Name="PeakChlDepth"/></Setting>
<Setting><Trigger:PeakDetectHorizontal.latitudeFrom/><Arg Name="PeakChlLatitude"/></Setting>
<Setting><Trigger:PeakDetectHorizontal.longitudeFrom/><Arg Name="PeakChlLongitude"/></Setting>
<Setting><Trigger:PeakDetectHorizontal.patchTracking/><Arg Name="PatchTracking"/></Setting>
<Setting><Trigger:PeakDetectHorizontal.filterWidth/><Arg Name="FilterWidthHorizontal"/></Setting>
<Setting><Trigger:PeakDetectHorizontal.numProfilesSlidingwindow/><Arg Name="NumProfilesSlidingwindow"/></Setting>
<Setting><Trigger:PeakDetectHorizontal.offPeakFraction/><Arg Name="OffPeakFractionHorizontal"/></Setting>
<OutputArg Name="PatchChl"><Trigger:PeakDetectHorizontal.peakDetect/></OutputArg>
<OutputArg Name="PatchChlDepth"><Trigger:PeakDetectHorizontal.peakDepth/></OutputArg>
<OutputArg Name="PatchChlLatitude"><Trigger:PeakDetectHorizontal.peakLatitude/></OutputArg>
<OutputArg Name="PatchChlLongitude"><Trigger:PeakDetectHorizontal.peakLongitude/></OutputArg>
<OutputArg Name="PatchChlDistance"><Trigger:PeakDetectHorizontal.peakDistance/></OutputArg>
</Trigger:PeakDetectHorizontal>
</Aggregate>
<Aggregate Id="PeakDetectNO3">
<While>
<Arg Name="PeakDetectNO3Active"/>
</While>
<Trigger:PeakDetectVsDepth>
<Sequence/>
<Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mole_concentration_of_nitrate_in_sea_water/></Setting>
<OutputArg Name="PeakNO3"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
<OutputArg Name="PeakNO3Depth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
<OutputArg Name="PeakNO3Latitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
<OutputArg Name="PeakNO3Longitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
</Trigger:PeakDetectVsDepth>
<SendData Service="Express">
<Arg Name="PeakNO3"/><Arg Name="PeakNO3Depth"/>
</SendData>
</Aggregate>
<Aggregate Id="PeakDetectOil">
<While>
<Arg Name="PeakDetectOilActive"/>
</While>
<Trigger:PeakDetectVsDepth>
<Sequence/>
<Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mass_concentration_of_petroleum_hydrocarbons_in_sea_water/></Setting>
<Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
<OutputArg Name="PeakOil"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
<OutputArg Name="PeakOilDepth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
<OutputArg Name="PeakOilLatitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
<OutputArg Name="PeakOilLongitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
</Trigger:PeakDetectVsDepth>
<SendData Service="Express">
<Arg Name="PeakOil"/><Arg Name="PeakOilDepth"/>
</SendData>
</Aggregate>
</Aggregate>
2018-09-24T19:54:46.050Z,1537818886.050 [CommandLine](IMPORTANT): Running ./Missions/Insert/Science_yz.xml
2018-09-24T19:54:46.051Z,1537818886.051 [Default] Stopped
2018-09-24T19:54:46.051Z,1537818886.051 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-24T19:54:46.051Z,1537818886.051 [Default:B.GoToSurface] Stopped
2018-09-24T19:54:46.051Z,1537818886.051 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-24T19:54:46.051Z,1537818886.051 [Default:CheckIn] Stopped
2018-09-24T19:54:46.051Z,1537818886.051 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-24T19:54:46.051Z,1537818886.051 [Default:CheckIn:C.Wait] Stopped
2018-09-24T19:54:46.051Z,1537818886.051 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-24T19:54:46.051Z,1537818886.051 [MissionManager](IMPORTANT): Started mission Science
2018-09-24T19:54:46.052Z,1537818886.052 [Science] Running Loop=1
2018-09-24T19:54:46.052Z,1537818886.052 [Science](DEBUG): Aggregate::initialize Science
2018-09-24T19:54:46.052Z,1537818886.052 [Science:A] Running Loop=1
2018-09-24T19:54:46.052Z,1537818886.052 [Science:B] Running Loop=1
2018-09-24T19:54:46.052Z,1537818886.052 [Science:C] Running Loop=1
2018-09-24T19:54:46.052Z,1537818886.052 [Science:D] Running Loop=1
2018-09-24T19:54:46.052Z,1537818886.052 [Science:E] Running Loop=1
2018-09-24T19:54:46.052Z,1537818886.052 [Science:F] Running Loop=1
2018-09-24T19:54:46.052Z,1537818886.052 [Science:G] Running Loop=1
2018-09-24T19:54:46.052Z,1537818886.052 [Science:Read_Oil] Running Loop=1
2018-09-24T19:54:46.061Z,1537818886.061 [Science:PeakDetectChl] Running Loop=1
2018-09-24T19:54:46.061Z,1537818886.061 [Science:PeakDetectChl](DEBUG): Aggregate::initialize Science:PeakDetectChl
2018-09-24T19:54:46.061Z,1537818886.061 [Science:PeakDetectChl:A] Running Loop=1
2018-09-24T19:54:46.061Z,1537818886.061 [Science:HighestChlPeakReport] Running Loop=1
2018-09-24T19:54:46.062Z,1537818886.062 [Science:HighestChlPeakReport](DEBUG): Aggregate::initialize Science:HighestChlPeakReport
2018-09-24T19:54:46.062Z,1537818886.062 [Science:HighestChlPeakReport:A] Running Loop=1
2018-09-24T19:54:46.062Z,1537818886.062 [Science:PeakDetectNO3] Running Loop=1
2018-09-24T19:54:46.062Z,1537818886.062 [Science:PeakDetectNO3](DEBUG): Aggregate::initialize Science:PeakDetectNO3
2018-09-24T19:54:46.062Z,1537818886.062 [Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2018-09-24T19:54:46.062Z,1537818886.062 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-24T19:54:46.063Z,1537818886.063 [Science:PeakDetectOil] Running Loop=1
2018-09-24T19:54:46.064Z,1537818886.064 [Science:PeakDetectOil](DEBUG): Aggregate::initialize Science:PeakDetectOil
2018-09-24T19:54:46.064Z,1537818886.064 [Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2018-09-24T19:54:46.064Z,1537818886.064 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-24T19:54:46.070Z,1537818886.070 [Science:PeakDetectOil] Stopped
2018-09-24T19:54:46.070Z,1537818886.070 [Science:PeakDetectOil](DEBUG): Aggregate::uninitialize Science:PeakDetectOil
2018-09-24T19:54:46.071Z,1537818886.071 [Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2018-09-24T19:54:46.071Z,1537818886.071 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-24T19:54:46.071Z,1537818886.071 [Science:PeakDetectNO3] Stopped
2018-09-24T19:54:46.071Z,1537818886.071 [Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize Science:PeakDetectNO3
2018-09-24T19:54:46.071Z,1537818886.071 [Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2018-09-24T19:54:46.071Z,1537818886.071 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-24T19:54:46.071Z,1537818886.071 [Science:HighestChlPeakReport] Stopped
2018-09-24T19:54:46.071Z,1537818886.071 [Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize Science:HighestChlPeakReport
2018-09-24T19:54:46.071Z,1537818886.071 [Science:HighestChlPeakReport:A] Stopped
2018-09-24T19:54:46.071Z,1537818886.071 [Science:PeakDetectChl] Stopped
2018-09-24T19:54:46.072Z,1537818886.072 [Science:PeakDetectChl](DEBUG): Aggregate::uninitialize Science:PeakDetectChl
2018-09-24T19:54:46.072Z,1537818886.072 [Science:PeakDetectChl:A] Stopped
2018-09-24T19:54:46.072Z,1537818886.072 [Science:Read_Oil] Running Loop=1
2018-09-24T19:54:46.072Z,1537818886.072 [Science:Read_Oil](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-24T19:54:46.087Z,1537818886.087 [Science:G] Stopped
2018-09-24T19:54:46.087Z,1537818886.087 [Science:F] Stopped
2018-09-24T19:54:46.087Z,1537818886.087 [Science:E] Stopped
2018-09-24T19:54:46.087Z,1537818886.087 [Science:D] Stopped
2018-09-24T19:54:46.087Z,1537818886.087 [Science:C] Stopped
2018-09-24T19:54:46.087Z,1537818886.087 [Science:B] Stopped
2018-09-24T19:54:46.087Z,1537818886.087 [Science:A] Stopped
2018-09-24T19:54:46.449Z,1537818886.449 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-24T19:54:46.449Z,1537818886.449 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-24T19:55:06.519Z,1537818906.519 [CommandLine](IMPORTANT): got command show variable peakChl
2018-09-24T19:55:06.788Z,1537818906.788 [CommandLine](IMPORTANT): Science.PeakChlShallowBound (meter)
2018-09-24T19:55:06.793Z,1537818906.793 [CommandLine](IMPORTANT): Science.PeakChlDeepBound (meter)
2018-09-24T19:55:06.798Z,1537818906.798 [CommandLine](IMPORTANT): Science.PeakChl (microgram_per_liter)
2018-09-24T19:55:06.798Z,1537818906.798 [CommandLine](IMPORTANT): Science.PeakChlDepth (meter)
2018-09-24T19:55:06.798Z,1537818906.798 [CommandLine](IMPORTANT): Science.PeakChlTemperature (celsius)
2018-09-24T19:55:06.799Z,1537818906.799 [CommandLine](IMPORTANT): Science.PeakChlLatitude (degree)
2018-09-24T19:55:06.799Z,1537818906.799 [CommandLine](IMPORTANT): Science.PeakChlLongitude (degree)
2018-09-24T19:55:16.313Z,1537818916.313 [CommandLine](IMPORTANT): got command report touch Science.PeakChl
2018-09-24T19:55:21.775Z,1537818921.775 [CommandLine](IMPORTANT): got command get Science.PeakChl
2018-09-24T19:55:21.776Z,1537818921.776 [CommandLine](IMPORTANT): Science.PeakChl 0.000000 ug/l
2018-09-24T19:55:32.011Z,1537818932.011 [CommandLine](IMPORTANT): got command show variable peakDetect
2018-09-24T19:55:32.250Z,1537818932.250 [CommandLine](IMPORTANT): Science.PeakDetectChlActive (bool)
2018-09-24T19:55:32.251Z,1537818932.251 [CommandLine](IMPORTANT): Science.PeakDetectNO3Active (bool)
2018-09-24T19:55:32.251Z,1537818932.251 [CommandLine](IMPORTANT): Science.PeakDetectOilActive (bool)
2018-09-24T19:55:38.434Z,1537818938.434 [CommandLine](IMPORTANT): got command get Science.PeakDetectChlActive
2018-09-24T19:55:38.435Z,1537818938.435 [CommandLine](IMPORTANT): Science.PeakDetectChlActive 0 bool
2018-09-24T19:55:57.871Z,1537818957.871 [CommandLine](IMPORTANT): got command set Science.PeakDetectChlActive 1.000000 bool
2018-09-24T19:56:01.055Z,1537818961.055 [Science:PeakDetectChl] Running Loop=1
2018-09-24T19:56:01.055Z,1537818961.055 [Science:PeakDetectChl](DEBUG): Aggregate::initialize Science:PeakDetectChl
2018-09-24T19:56:01.055Z,1537818961.055 [Science:PeakDetectChl:A] Running Loop=1
2018-09-24T19:56:01.055Z,1537818961.055 [Science:PeakDetectChl] Running Loop=1
2018-09-24T19:56:01.055Z,1537818961.055 [Science:PeakDetectChl:A](IMPORTANT): Calling peak detect vs depth
2018-09-24T19:56:01.057Z,1537818961.057 [Science:PeakDetectChl:A] Stopped
2018-09-24T19:56:01.057Z,1537818961.057 [Science:PeakDetectChl:B.PeakDetectVsDepth] Running Loop=1
2018-09-24T19:56:01.057Z,1537818961.057 [Science:PeakDetectChl:B.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-24T19:56:01.059Z,1537818961.059 [Science:G] Running Loop=1
2018-09-24T19:56:01.059Z,1537818961.059 [Science:G] Running Loop=1
2018-09-24T19:56:01.060Z,1537818961.060 [Science:G](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-24T20:00:25.198Z,1537819225.198 [CommandLine](IMPORTANT): got command show variable shallowB
2018-09-24T20:00:25.238Z,1537819225.238 [CommandLine](IMPORTANT): TempGradientCalculator.depShallowBndForAvg (meter)
2018-09-24T20:00:25.423Z,1537819225.423 [CommandLine](IMPORTANT): Science.PeakChlShallowBound (meter)
2018-09-24T20:00:34.228Z,1537819234.228 [CommandLine](IMPORTANT): got command get Science.PeakChlShallowBound
2018-09-24T20:00:34.229Z,1537819234.229 [CommandLine](IMPORTANT): Science.PeakChlShallowBound 10.000000 m
2018-09-24T20:00:52.167Z,1537819252.167 [CommandLine](IMPORTANT): got command set Science.PeakChlShallowBound 0.000000 meter
2018-09-24T20:01:04.574Z,1537819264.574 [CommandLine](IMPORTANT): got command get Science.PeakChlShallowBound
2018-09-24T20:01:04.575Z,1537819264.575 [CommandLine](IMPORTANT): Science.PeakChlShallowBound 0.000000 m
2018-09-24T20:01:10.508Z,1537819270.508 [CommandLine](IMPORTANT): got command stop
2018-09-24T20:01:10.508Z,1537819270.508 [Supervisor](INFO): Stop Mission called by CommandLine::commandStop
2018-09-24T20:01:10.744Z,1537819270.744 [MissionManager](INFO): MissionManager is completed.
2018-09-24T20:01:10.749Z,1537819270.749 [MissionManager](INFO): Uninitializing Mission Science
2018-09-24T20:01:10.749Z,1537819270.749 [Science] Stopped
2018-09-24T20:01:10.749Z,1537819270.749 [Science](DEBUG): Aggregate::uninitialize Science
2018-09-24T20:01:10.749Z,1537819270.749 [Science:G] Stopped
2018-09-24T20:01:10.749Z,1537819270.749 [Science:Read_Oil] Stopped
2018-09-24T20:01:10.749Z,1537819270.749 [Science:PeakDetectChl] Stopped
2018-09-24T20:01:10.749Z,1537819270.749 [Science:PeakDetectChl](DEBUG): Aggregate::uninitialize Science:PeakDetectChl
2018-09-24T20:01:10.750Z,1537819270.750 [Science:PeakDetectChl:B.PeakDetectVsDepth] Stopped
2018-09-24T20:01:10.750Z,1537819270.750 [Science:PeakDetectChl:B.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-24T20:01:11.065Z,1537819271.065 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-24T20:01:11.140Z,1537819271.140 [MissionManager](IMPORTANT): Started mission Default
2018-09-24T20:01:11.140Z,1537819271.140 [Default] Running Loop=1
2018-09-24T20:01:11.140Z,1537819271.140 [Default](DEBUG): Aggregate::initialize Default
2018-09-24T20:01:11.145Z,1537819271.145 [Default:B.GoToSurface] Running Loop=1
2018-09-24T20:01:11.145Z,1537819271.145 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-24T20:01:11.145Z,1537819271.145 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-24T20:01:11.146Z,1537819271.146 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-24T20:01:11.146Z,1537819271.146 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-24T20:01:11.146Z,1537819271.146 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-24T20:01:11.147Z,1537819271.147 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-24T20:01:11.147Z,1537819271.147 [Default:A.Wait] Running Loop=1
2018-09-24T20:01:11.147Z,1537819271.147 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-24T20:01:22.229Z,1537819282.229 [CommandLine](IMPORTANT): got command load ./Missions/Insert/Science_yz.xml
2018-09-24T20:01:22.230Z,1537819282.230 [MissionManager](INFO): Loading Mission: ./Missions/Insert/Science_yz.xml
2018-09-24T20:01:22.547Z,1537819282.547 [MissionManager](INFO): DefineArg Science.SampleISUS = 0 bool
2018-09-24T20:01:22.550Z,1537819282.550 [MissionManager](INFO): DefineArg Science.SampleISUSmaxPitch = 60.000000 arcdeg
2018-09-24T20:01:22.552Z,1537819282.552 [MissionManager](INFO): DefineArg Science.SampleISUSminPitch = -60.000000 arcdeg
2018-09-24T20:01:22.581Z,1537819282.581 [MissionManager](INFO): DefineArg Science.PeakDetectChlActive = 0 bool
2018-09-24T20:01:22.583Z,1537819282.583 [MissionManager](INFO): DefineArg Science.HighestChlPeakReportActive = 0 bool
2018-09-24T20:01:22.585Z,1537819282.585 [MissionManager](INFO): DefineArg Science.PatchTracking = 1 bool
2018-09-24T20:01:22.588Z,1537819282.588 [MissionManager](INFO): DefineArg Science.FilterWidthHorizontal = 3.000000 count
2018-09-24T20:01:22.590Z,1537819282.590 [MissionManager](INFO): DefineArg Science.NumProfilesSlidingwindow = 100.000000 count
2018-09-24T20:01:22.592Z,1537819282.592 [MissionManager](INFO): DefineArg Science.OffPeakFractionHorizontal = 80.000000 %
2018-09-24T20:01:22.594Z,1537819282.594 [MissionManager](INFO): DefineArg Science.PeakDetectNO3Active = 0 bool
2018-09-24T20:01:22.596Z,1537819282.596 [MissionManager](INFO): DefineArg Science.PeakDetectOilActive = 0 bool
2018-09-24T20:01:22.598Z,1537819282.598 [MissionManager](INFO): DefineArg Science.UpwardDerivativeOfTemperatureActive = 0 bool
2018-09-24T20:01:22.601Z,1537819282.601 [MissionManager](INFO): DefineArg Science.EnabledAanderaaO2 = 0.000000 bool
2018-09-24T20:01:22.603Z,1537819282.603 [MissionManager](INFO): DefineArg Science.EnabledNeilBrown = 0.000000 bool
2018-09-24T20:01:22.654Z,1537819282.654 [MissionManager](INFO): DefineArg Science.EnabledSeabird = 0.000000 bool
2018-09-24T20:01:22.657Z,1537819282.657 [MissionManager](INFO): DefineArg Science.EnabledTurbulence_NPS = 0.000000 bool
2018-09-24T20:01:22.660Z,1537819282.660 [MissionManager](INFO): DefineArg Science.EnabledWetLabsBB2FL = 0.000000 bool
2018-09-24T20:01:22.734Z,1537819282.734 [MissionManager](INFO): DefineArg Science.EnabledWetLabsSeaOWL_UV_A = 1.000000 bool
2018-09-24T20:01:22.753Z,1537819282.753 [MissionManager](INFO): DefineArg Science.EnabledISUS = 0.000000 bool
2018-09-24T20:01:22.755Z,1537819282.755 [MissionManager](INFO): DefineArg Science.LowPassWindowLength = 20.000000 count
2018-09-24T20:01:22.771Z,1537819282.771 [MissionManager](INFO): DefineArg Science.PeakChlShallowBound = 10.000000 m
2018-09-24T20:01:22.774Z,1537819282.774 [MissionManager](INFO): DefineArg Science.PeakChlDeepBound = 20.000000 m
2018-09-24T20:01:22.776Z,1537819282.776 [MissionManager](INFO): DefineOutput Science.PeakChl = 0.000000 ug/l
2018-09-24T20:01:22.783Z,1537819282.783 [MissionManager](INFO): DefineOutput Science.PeakChlDepth = 0.000000 m
2018-09-24T20:01:22.802Z,1537819282.802 [MissionManager](INFO): DefineOutput Science.PeakChlTemperature = 0.000000 degC
2018-09-24T20:01:22.804Z,1537819282.804 [MissionManager](INFO): DefineOutput Science.PeakChlLatitude = nan arcdeg
2018-09-24T20:01:22.812Z,1537819282.812 [MissionManager](INFO): DefineOutput Science.PeakChlLongitude = nan arcdeg
2018-09-24T20:01:22.827Z,1537819282.827 [MissionManager](INFO): DefineOutput Science.PeakNO3 = 0.000000 umol/l
2018-09-24T20:01:22.856Z,1537819282.856 [MissionManager](INFO): DefineOutput Science.PeakNO3Depth = 0.000000 m
2018-09-24T20:01:22.864Z,1537819282.864 [MissionManager](INFO): DefineOutput Science.PeakNO3Latitude = nan arcdeg
2018-09-24T20:01:22.871Z,1537819282.871 [MissionManager](INFO): DefineOutput Science.PeakNO3Longitude = nan arcdeg
2018-09-24T20:01:22.878Z,1537819282.878 [MissionManager](INFO): DefineOutput Science.PatchChl = 0.000000 m
2018-09-24T20:01:22.880Z,1537819282.880 [MissionManager](INFO): DefineOutput Science.PatchChlDepth = 0.000000 m
2018-09-24T20:01:22.891Z,1537819282.891 [MissionManager](INFO): DefineOutput Science.PatchChlLatitude = nan arcdeg
2018-09-24T20:01:22.894Z,1537819282.894 [MissionManager](INFO): DefineOutput Science.PatchChlLongitude = nan arcdeg
2018-09-24T20:01:22.896Z,1537819282.896 [MissionManager](INFO): DefineOutput Science.PatchChlDistance = nan m
2018-09-24T20:01:22.899Z,1537819282.899 [MissionManager](INFO): DefineOutput Science.PeakOil = 0.000000 kg/m3
2018-09-24T20:01:22.913Z,1537819282.913 [MissionManager](INFO): DefineOutput Science.PeakOilDepth = 0.000000 m
2018-09-24T20:01:22.916Z,1537819282.916 [MissionManager](INFO): DefineOutput Science.PeakOilLatitude = nan arcdeg
2018-09-24T20:01:22.918Z,1537819282.918 [MissionManager](INFO): DefineOutput Science.PeakOilLongitude = nan arcdeg
2018-09-24T20:01:22.948Z,1537819282.948 [Science:PeakDetectChl:B.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-24T20:01:22.987Z,1537819282.987 [Science:HighestChlPeakReport:B.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-24T20:01:23.047Z,1537819283.047 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-24T20:01:23.114Z,1537819283.114 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-24T20:01:23.237Z,1537819283.237 [Reporter](INFO): Science.PeakChl 0.000000 ug/l
2018-09-24T20:01:23.255Z,1537819283.255 [MissionManager](DEBUG):
<?xml version="1.0" encoding="UTF-8"?>
<!-- ====================
Generated by TethysL
==================== -->
<Aggregate xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xmlns="Tethys"
xmlns:Units="Tethys/Units"
xmlns:Science="Tethys/Science"
xmlns:Universal="Tethys/Universal"
xmlns:Trigger="Tethys/Trigger"
xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
Tethys/Science http://okeanids.mbari.org/tethys/Xml/Science.xsd
Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd
Tethys/Trigger http://okeanids.mbari.org/tethys/Xml/Trigger.xsd"
Id="Science">
<DefineArg Name="SampleISUS"><Description>
Set either this or PeakDetectNO3Active to True in order to sample
Nitrate. EnabledISUS must also be true.
</Description><False/></DefineArg>
<DefineArg Name="SampleISUSmaxPitch"><Description>
Maximum pitch to sample ISUS. (EnabledISUS must also be true.)
</Description><Units:degree/><Value>60.0</Value></DefineArg>
<DefineArg Name="SampleISUSminPitch"><Description>
Minimum pitch to sample ISUS. (EnabledISUS must also be true.)
</Description><Units:degree/><Value>-60.0</Value></DefineArg>
<DefineArg Name="PeakDetectChlActive"><Description>
Turns on peak detection of Cholorphyll.
</Description><False/></DefineArg>
<DefineArg Name="HighestChlPeakReportActive"><Description>
Turns on reporting of the highest peak value on yo-yo profiles in a
horizontal sliding window (of length numProfilesSlidingwindow)
</Description><False/></DefineArg>
<DefineArg Name="PatchTracking"><Description>
If tracking a patch
<!--debug
</Description><False/></DefineArg>
-->
</Description><True/></DefineArg>
<DefineArg Name="FilterWidthHorizontal"><Description>
Width of boxcar filter applied to yoyo-wise chl peaks to pick out the
highest peak.
</Description><Units:count/><Value>3</Value></DefineArg>
<DefineArg Name="NumProfilesSlidingwindow"><Description>
Length of horizontal sliding window. The highest yoyo-wise chl peak
(after low-pass filtering by a filter of length FilterWidthHorizontal)
within this window.
</Description><Units:count/><Value>100</Value></DefineArg>
<DefineArg Name="OffPeakFractionHorizontal"><Description>
When filtered horizontal value is this fraction of the peak, consider it
outside the patch.
</Description><Units:percent/><Value>80</Value></DefineArg>
<DefineArg Name="PeakDetectNO3Active"><Description>
Turns on peak detection of Nitrate (and turns on ISUS).
</Description><False/></DefineArg>
<DefineArg Name="PeakDetectOilActive"><Description>
Turns on peak detection of Dissolved Oil.
</Description><False/></DefineArg>
<DefineArg Name="UpwardDerivativeOfTemperatureActive"><Description>
Turns on seawater temperature derivative.
</Description><False/></DefineArg>
<DefineArg Name="EnabledAanderaaO2"><Description>
Automatically set to True if the Aanderaa O2 sensor is installed. Set to
false to disable reading Aandera O2.
</Description><Science:Aanderaa_O2.loadAtStartup/></DefineArg>
<DefineArg Name="EnabledNeilBrown"><Description>
Automatically set to true if the Neil Brown CTD is enabled. Set to false
to disable reading from the Neil Brown.
</Description><Science:CTD_NeilBrown.loadAtStartup/></DefineArg>
<DefineArg Name="EnabledSeabird"><Description>
Automatically set to true if the CTD is enabled. Set to false to disable
reading from the CTD.
</Description><Science:CTD_Seabird.loadAtStartup/></DefineArg>
<DefineArg Name="EnabledTurbulence_NPS"><Description>
Automatically set to true if the NPS Turbulence sensor is enabled. Set
to false to disable reading from the NPS Turbulence sensor.
</Description><Science:Turbulence_NPS.loadAtStartup/></DefineArg>
<DefineArg Name="EnabledWetLabsBB2FL"><Description>
Automatically set to true if the the WetLabs BB2FL is enabled. Set to
false to disable the WetLabs BB2FL.
</Description><Science:WetLabsBB2FL.loadAtStartup/></DefineArg>
<DefineArg Name="EnabledWetLabsSeaOWL_UV_A"><Description>
Automatically set to true if the the WetLabs SeaOWL UV-A is enabled. Set
to false to disable the WetLabs SeaOWL UV-A.
</Description><Science:WetLabsSeaOWL_UV_A.loadAtStartup/></DefineArg>
<DefineArg Name="EnabledISUS"><Description>
Automatically set to True if ISUS is enabled. Set to false to disable
ISUS.
</Description><Science:ISUS.loadAtStartup/></DefineArg>
<DefineArg Name="LowPassWindowLength"><Description>
Low-pass window length (based on depth sensor sampling interval 0.4
second) for low-pass filtering.
</Description><Units:count/><Value>20</Value></DefineArg>
<DefineArg Name="PeakChlShallowBound"><Description>
Shallow depth bound for detecting chl peak on each descent or ascent
profile.
<!--debug
</Description><Units:meter/><Value>NaN</Value></DefineArg>
-->
</Description><Units:meter/><Value>10</Value></DefineArg>
<DefineArg Name="PeakChlDeepBound"><Description>
Deep depth bound for detecting chl peak on each descent or ascent
profile.
<!--debug
</Description><Units:meter/><Value>NaN</Value></DefineArg>
-->
</Description><Units:meter/><Value>20</Value></DefineArg>
<DefineOutput Name="PeakChl"><Units:microgram_per_liter/><Value>0</Value></DefineOutput>
<DefineOutput Name="PeakChlDepth"><Units:meter/><Value>0</Value></DefineOutput>
<DefineOutput Name="PeakChlTemperature"><Units:celsius/><Value>0</Value></DefineOutput>
<DefineOutput Name="PeakChlLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>
<DefineOutput Name="PeakChlLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>
<DefineOutput Name="PeakNO3"><Units:micromole_per_liter/><Value>0</Value></DefineOutput>
<DefineOutput Name="PeakNO3Depth"><Units:meter/><Value>0</Value></DefineOutput>
<DefineOutput Name="PeakNO3Latitude"><Units:degree/><Value>NaN</Value></DefineOutput>
<DefineOutput Name="PeakNO3Longitude"><Units:degree/><Value>NaN</Value></DefineOutput>
<DefineOutput Name="PatchChl"><Units:meter/><Value>0</Value></DefineOutput>
<DefineOutput Name="PatchChlDepth"><Units:meter/><Value>0</Value></DefineOutput>
<DefineOutput Name="PatchChlLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>
<DefineOutput Name="PatchChlLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>
<DefineOutput Name="PatchChlDistance"><Units:meter/><Value>NaN</Value></DefineOutput>
<DefineOutput Name="PeakOil"><Units:kilogram_per_cubic_meter/><Value>0</Value></DefineOutput>
<DefineOutput Name="PeakOilDepth"><Units:meter/><Value>0</Value></DefineOutput>
<DefineOutput Name="PeakOilLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>
<DefineOutput Name="PeakOilLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>
<Parallel/>
<ReadData Strategy="MinError">
<While>
<Arg Name="EnabledAanderaaO2"/>
</While>
<Universal:mass_concentration_of_oxygen_in_sea_water/>
</ReadData>
<ReadData>
<While>
<Arg Name="EnabledISUS"/>
<And>
<Universal:platform_pitch_angle/>
<Lt>
<Arg Name="SampleISUSmaxPitch"/>
</Lt>
<And>
<Universal:platform_pitch_angle/>
<Gt>
<Arg Name="SampleISUSminPitch"/>
</Gt>
<And>
<Arg Name="SampleISUS"/>
<Or>
<Arg Name="PeakDetectNO3Active"/>
</Or>
</And>
</And>
</And>
</While>
<Universal:mole_concentration_of_nitrate_in_sea_water/>
</ReadData>
<ReadData Strategy="MinError">
<While>
<Arg Name="EnabledNeilBrown"/>
<Or>
<Arg Name="EnabledSeabird"/>
</Or>
</While>
<Universal:sea_water_temperature/>
<Universal:sea_water_salinity/>
</ReadData>
<ReadData Strategy="MinError">
<While>
<Arg Name="EnabledSeabird"/>
</While>
<Science:CTD_Seabird.sea_water_temperature/>
<Science:CTD_Seabird.sea_water_salinity/>
</ReadData>
<ReadData Strategy="MinError">
<While>
<Arg Name="EnabledNeilBrown"/>
<Or>
<Arg Name="EnabledSeabird"/>
</Or>
<And>
<Arg Name="UpwardDerivativeOfTemperatureActive"/>
</And>
</While>
<Universal:upward_derivative_of_sea_water_temperature/>
</ReadData>
<ReadData Strategy="MinError">
<While>
<Arg Name="EnabledTurbulence_NPS"/>
</While>
<Science:Turbulence_NPS.MicroCond/>
</ReadData>
<ReadData Strategy="MinError">
<While>
<Arg Name="EnabledWetLabsBB2FL"/>
<Or>
<Arg Name="PeakDetectChlActive"/>
</Or>
</While>
<Universal:mass_concentration_of_chlorophyll_in_sea_water/>
</ReadData>
<!--debug-->
<ReadData Id="Read_Oil" Strategy="MinError">
<While>
<Arg Name="EnabledWetLabsSeaOWL_UV_A"/>
<Or>
<Arg Name="PeakDetectOilActive"/>
</Or>
<Or>
<Arg Name="PeakDetectChlActive"/>
</Or>
</While>
<Universal:mass_concentration_of_chlorophyll_in_sea_water/>
</ReadData>
<Aggregate Id="PeakDetectChl">
<While>
<Arg Name="PeakDetectChlActive"/>
</While>
<Syslog Severity="Important">Calling peak detect vs depth</Syslog>
<Trigger:PeakDetectVsDepth>
<Sequence/>
<Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mass_concentration_of_chlorophyll_in_sea_water/></Setting>
<Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
<Setting><Trigger:PeakDetectVsDepth.shallowBound/><Arg Name="PeakChlShallowBound"/></Setting>
<Setting><Trigger:PeakDetectVsDepth.deepBound/><Arg Name="PeakChlDeepBound"/></Setting>
<OutputArg Name="PeakChl"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
<OutputArg Name="PeakChlDepth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
<OutputArg Name="PeakChlTemperature"><Trigger:PeakDetectVsDepth.peakTemperature/></OutputArg>
<OutputArg Name="PeakChlLatitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
<OutputArg Name="PeakChlLongitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
</Trigger:PeakDetectVsDepth>
<!--debug-->
<Syslog Severity="Important">PeakChl, PeakChlLatitude, PeakChlLongitude = <Arg Name="PeakChl"/><Units:microgram_per_liter/>, <Arg Name="PeakChlLatitude"/><Units:degree/>, <Arg Name="PeakChlLongitude"/><Units:degree/></Syslog>
<SendData Service="Express">
<Arg Name="PeakChl"/><Arg Name="PeakChlDepth"/>
</SendData>
</Aggregate>
<Aggregate Id="HighestChlPeakReport">
<While>
<Arg Name="HighestChlPeakReportActive"/>
</While>
<Syslog Severity="Important">Calling peak detect horizontal</Syslog>
<Trigger:PeakDetectHorizontal>
<Sequence/>
<Setting><Trigger:PeakDetectHorizontal.detectFrom/><Arg Name="PeakChl"/></Setting>
<Setting><Trigger:PeakDetectHorizontal.depthFrom/><Arg Name="PeakChlDepth"/></Setting>
<Setting><Trigger:PeakDetectHorizontal.latitudeFrom/><Arg Name="PeakChlLatitude"/></Setting>
<Setting><Trigger:PeakDetectHorizontal.longitudeFrom/><Arg Name="PeakChlLongitude"/></Setting>
<Setting><Trigger:PeakDetectHorizontal.patchTracking/><Arg Name="PatchTracking"/></Setting>
<Setting><Trigger:PeakDetectHorizontal.filterWidth/><Arg Name="FilterWidthHorizontal"/></Setting>
<Setting><Trigger:PeakDetectHorizontal.numProfilesSlidingwindow/><Arg Name="NumProfilesSlidingwindow"/></Setting>
<Setting><Trigger:PeakDetectHorizontal.offPeakFraction/><Arg Name="OffPeakFractionHorizontal"/></Setting>
<OutputArg Name="PatchChl"><Trigger:PeakDetectHorizontal.peakDetect/></OutputArg>
<OutputArg Name="PatchChlDepth"><Trigger:PeakDetectHorizontal.peakDepth/></OutputArg>
<OutputArg Name="PatchChlLatitude"><Trigger:PeakDetectHorizontal.peakLatitude/></OutputArg>
<OutputArg Name="PatchChlLongitude"><Trigger:PeakDetectHorizontal.peakLongitude/></OutputArg>
<OutputArg Name="PatchChlDistance"><Trigger:PeakDetectHorizontal.peakDistance/></OutputArg>
</Trigger:PeakDetectHorizontal>
</Aggregate>
<Aggregate Id="PeakDetectNO3">
<While>
<Arg Name="PeakDetectNO3Active"/>
</While>
<Trigger:PeakDetectVsDepth>
<Sequence/>
<Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mole_concentration_of_nitrate_in_sea_water/></Setting>
<OutputArg Name="PeakNO3"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
<OutputArg Name="PeakNO3Depth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
<OutputArg Name="PeakNO3Latitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
<OutputArg Name="PeakNO3Longitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
</Trigger:PeakDetectVsDepth>
<SendData Service="Express">
<Arg Name="PeakNO3"/><Arg Name="PeakNO3Depth"/>
</SendData>
</Aggregate>
<Aggregate Id="PeakDetectOil">
<While>
<Arg Name="PeakDetectOilActive"/>
</While>
<Trigger:PeakDetectVsDepth>
<Sequence/>
<Setting><Trigger:PeakDetectVsDepth.detect/><Universal:mass_concentration_of_petroleum_hydrocarbons_in_sea_water/></Setting>
<Setting><Trigger:PeakDetectVsDepth.windowLength/><Arg Name="LowPassWindowLength"/></Setting>
<OutputArg Name="PeakOil"><Trigger:PeakDetectVsDepth.peakDetect/></OutputArg>
<OutputArg Name="PeakOilDepth"><Trigger:PeakDetectVsDepth.peakDepth/></OutputArg>
<OutputArg Name="PeakOilLatitude"><Trigger:PeakDetectVsDepth.peakLatitude/></OutputArg>
<OutputArg Name="PeakOilLongitude"><Trigger:PeakDetectVsDepth.peakLongitude/></OutputArg>
</Trigger:PeakDetectVsDepth>
<SendData Service="Express">
<Arg Name="PeakOil"/><Arg Name="PeakOilDepth"/>
</SendData>
</Aggregate>
</Aggregate>
2018-09-24T20:01:23.256Z,1537819283.256 [CommandLine](IMPORTANT): Loaded ./Missions/Insert/Science_yz.xml
2018-09-24T20:01:24.339Z,1537819284.339 [Default:A.Wait](INFO): Done Waiting.
2018-09-24T20:01:24.339Z,1537819284.339 [Default:A.Wait] Stopped
2018-09-24T20:01:24.339Z,1537819284.339 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-24T20:01:24.731Z,1537819284.731 [Default:CheckIn] Running Loop=1
2018-09-24T20:01:24.732Z,1537819284.732 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-24T20:01:24.732Z,1537819284.732 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-24T20:01:25.486Z,1537819285.486 [NAL9602](INFO): Powering up
2018-09-24T20:01:28.834Z,1537819288.834 [CommandLine](IMPORTANT): got command show variable shallowB
2018-09-24T20:01:28.848Z,1537819288.848 [CommandLine](IMPORTANT): TempGradientCalculator.depShallowBndForAvg (meter)
2018-09-24T20:01:29.004Z,1537819289.004 [CommandLine](IMPORTANT): Science.PeakChlShallowBound (meter)
2018-09-24T20:01:36.299Z,1537819296.299 [NAL9602](INFO): NAL9602 initialized
2018-09-24T20:01:45.284Z,1537819305.284 [CommandLine](IMPORTANT): got command set Science.PeakChlShallowBound 0.000000 meter
2018-09-24T20:02:17.052Z,1537819337.052 [NAL9602](INFO): SBD MO Status=2, MOMSN=1609, MT Status=2, MTMSN=0
2018-09-24T20:02:17.052Z,1537819337.052 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-24T20:02:18.574Z,1537819338.574 [CommandLine](IMPORTANT): got command show variable depB
2018-09-24T20:02:24.383Z,1537819344.383 [CommandLine](IMPORTANT): got command show variable deepB
2018-09-24T20:02:24.392Z,1537819344.392 [CommandLine](IMPORTANT): TempGradientCalculator.depDeepBndForAvg (meter)
2018-09-24T20:02:24.555Z,1537819344.555 [CommandLine](IMPORTANT): Science.PeakChlDeepBound (meter)
2018-09-24T20:02:27.454Z,1537819347.454 [NAL9602](INFO): SBD MO Status=0, MOMSN=1609, MT Status=0, MTMSN=0
2018-09-24T20:02:27.454Z,1537819347.454 [NAL9602](INFO): No messages in MT queue
2018-09-24T20:02:33.134Z,1537819353.134 [CommandLine](IMPORTANT): got command get Science.PeakChlDeepBound
2018-09-24T20:02:33.135Z,1537819353.135 [CommandLine](IMPORTANT): Science.PeakChlDeepBound 20.000000 m
2018-09-24T20:02:41.754Z,1537819361.754 [CommandLine](IMPORTANT): got command show variable peakChl
2018-09-24T20:02:42.012Z,1537819362.012 [CommandLine](IMPORTANT): Science.PeakChlShallowBound (meter)
2018-09-24T20:02:42.013Z,1537819362.013 [CommandLine](IMPORTANT): Science.PeakChlDeepBound (meter)
2018-09-24T20:02:42.013Z,1537819362.013 [CommandLine](IMPORTANT): Science.PeakChl (microgram_per_liter)
2018-09-24T20:02:42.014Z,1537819362.014 [CommandLine](IMPORTANT): Science.PeakChlDepth (meter)
2018-09-24T20:02:42.014Z,1537819362.014 [CommandLine](IMPORTANT): Science.PeakChlTemperature (celsius)
2018-09-24T20:02:42.015Z,1537819362.015 [CommandLine](IMPORTANT): Science.PeakChlLatitude (degree)
2018-09-24T20:02:42.015Z,1537819362.015 [CommandLine](IMPORTANT): Science.PeakChlLongitude (degree)
2018-09-24T20:02:53.391Z,1537819373.391 [CommandLine](IMPORTANT): got command report touch Science.PeakChl
2018-09-24T20:02:56.926Z,1537819376.926 [CommandLine](IMPORTANT): got command show variable peakDet
2018-09-24T20:02:57.176Z,1537819377.176 [CommandLine](IMPORTANT): Science.PeakDetectChlActive (bool)
2018-09-24T20:02:57.181Z,1537819377.181 [CommandLine](IMPORTANT): Science.PeakDetectNO3Active (bool)
2018-09-24T20:02:57.181Z,1537819377.181 [CommandLine](IMPORTANT): Science.PeakDetectOilActive (bool)
2018-09-24T20:03:04.510Z,1537819384.510 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-32768,V
2018-09-24T20:03:32.164Z,1537819412.164 [CommandLine](IMPORTANT): got command set Science.PeakDetectChlActive 1.000000 bool
2018-09-24T20:03:42.364Z,1537819422.364 [CommandLine](IMPORTANT): got command show variable mass_conce
2018-09-24T20:03:42.367Z,1537819422.367 [CommandLine](IMPORTANT): mass_concentration_of_chlorophyll_in_sea_water (unknown)
2018-09-24T20:03:42.367Z,1537819422.367 [CommandLine](IMPORTANT): mass_concentration_of_oxygen_in_sea_water (unknown)
2018-09-24T20:03:42.367Z,1537819422.367 [CommandLine](IMPORTANT): mass_concentration_of_petroleum_hydrocarbons_in_sea_water (unknown)
2018-09-24T20:03:42.582Z,1537819422.582 [CommandLine](IMPORTANT): WetLabsSeaOWL_UV_A.mass_concentration_of_petroleum_hydrocarbons_in_sea_water (kilogram_per_cubic_meter)
2018-09-24T20:03:42.582Z,1537819422.582 [CommandLine](IMPORTANT): WetLabsSeaOWL_UV_A.mass_concentration_of_chlorophyll_in_sea_water (microgram_per_liter)
2018-09-24T20:03:55.802Z,1537819435.802 [CommandLine](IMPORTANT): got command show best mass_concentration_of_chlorophyll_in_sea_water
2018-09-24T20:03:55.802Z,1537819435.802 [CommandLine](IMPORTANT): mass_concentration_of_chlorophyll_in_sea_water best is null
2018-09-24T20:03:55.803Z,1537819435.803 [CommandLine](IMPORTANT): got command get mass_concentration_of_chlorophyll_in_sea_water
2018-09-24T20:03:55.803Z,1537819435.803 [CommandLine](FAULT): Element has no value
2018-09-24T20:04:01.207Z,1537819441.207 [CommandLine](IMPORTANT): got command run
2018-09-24T20:04:01.212Z,1537819441.212 [CommandLine](IMPORTANT): Running
2018-09-24T20:04:03.682Z,1537819443.682 [Default] Stopped
2018-09-24T20:04:03.682Z,1537819443.682 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-24T20:04:03.682Z,1537819443.682 [Default:B.GoToSurface] Stopped
2018-09-24T20:04:03.682Z,1537819443.682 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-24T20:04:03.682Z,1537819443.682 [Default:CheckIn] Stopped
2018-09-24T20:04:03.682Z,1537819443.682 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-24T20:04:03.682Z,1537819443.682 [Default:CheckIn:Read_GPS] Stopped
2018-09-24T20:04:03.683Z,1537819443.683 [MissionManager](IMPORTANT): Started mission Science
2018-09-24T20:04:03.683Z,1537819443.683 [Science] Running Loop=1
2018-09-24T20:04:03.683Z,1537819443.683 [Science](DEBUG): Aggregate::initialize Science
2018-09-24T20:04:03.683Z,1537819443.683 [Science:A] Running Loop=1
2018-09-24T20:04:03.683Z,1537819443.683 [Science:B] Running Loop=1
2018-09-24T20:04:03.683Z,1537819443.683 [Science:C] Running Loop=1
2018-09-24T20:04:03.683Z,1537819443.683 [Science:D] Running Loop=1
2018-09-24T20:04:03.683Z,1537819443.683 [Science:E] Running Loop=1
2018-09-24T20:04:03.684Z,1537819443.684 [Science:F] Running Loop=1
2018-09-24T20:04:03.684Z,1537819443.684 [Science:G] Running Loop=1
2018-09-24T20:04:03.684Z,1537819443.684 [Science:Read_Oil] Running Loop=1
2018-09-24T20:04:03.684Z,1537819443.684 [Science:PeakDetectChl] Running Loop=1
2018-09-24T20:04:03.684Z,1537819443.684 [Science:PeakDetectChl](DEBUG): Aggregate::initialize Science:PeakDetectChl
2018-09-24T20:04:03.684Z,1537819443.684 [Science:PeakDetectChl:A] Running Loop=1
2018-09-24T20:04:03.684Z,1537819443.684 [Science:HighestChlPeakReport] Running Loop=1
2018-09-24T20:04:03.684Z,1537819443.684 [Science:HighestChlPeakReport](DEBUG): Aggregate::initialize Science:HighestChlPeakReport
2018-09-24T20:04:03.684Z,1537819443.684 [Science:HighestChlPeakReport:A] Running Loop=1
2018-09-24T20:04:03.685Z,1537819443.685 [Science:PeakDetectNO3] Running Loop=1
2018-09-24T20:04:03.685Z,1537819443.685 [Science:PeakDetectNO3](DEBUG): Aggregate::initialize Science:PeakDetectNO3
2018-09-24T20:04:03.685Z,1537819443.685 [Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2018-09-24T20:04:03.685Z,1537819443.685 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-24T20:04:03.686Z,1537819443.686 [Science:PeakDetectOil] Running Loop=1
2018-09-24T20:04:03.686Z,1537819443.686 [Science:PeakDetectOil](DEBUG): Aggregate::initialize Science:PeakDetectOil
2018-09-24T20:04:03.686Z,1537819443.686 [Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2018-09-24T20:04:03.686Z,1537819443.686 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-24T20:04:03.688Z,1537819443.688 [Science:PeakDetectOil] Stopped
2018-09-24T20:04:03.688Z,1537819443.688 [Science:PeakDetectOil](DEBUG): Aggregate::uninitialize Science:PeakDetectOil
2018-09-24T20:04:03.688Z,1537819443.688 [Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2018-09-24T20:04:03.689Z,1537819443.689 [Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-24T20:04:03.689Z,1537819443.689 [Science:PeakDetectNO3] Stopped
2018-09-24T20:04:03.689Z,1537819443.689 [Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize Science:PeakDetectNO3
2018-09-24T20:04:03.689Z,1537819443.689 [Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2018-09-24T20:04:03.689Z,1537819443.689 [Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-24T20:04:03.689Z,1537819443.689 [Science:HighestChlPeakReport] Stopped
2018-09-24T20:04:03.689Z,1537819443.689 [Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize Science:HighestChlPeakReport
2018-09-24T20:04:03.690Z,1537819443.690 [Science:HighestChlPeakReport:A] Stopped
2018-09-24T20:04:03.690Z,1537819443.690 [Science:PeakDetectChl] Running Loop=1
2018-09-24T20:04:03.690Z,1537819443.690 [Science:PeakDetectChl:A](IMPORTANT): Calling peak detect vs depth
2018-09-24T20:04:03.691Z,1537819443.691 [Science:PeakDetectChl:A] Stopped
2018-09-24T20:04:03.691Z,1537819443.691 [Science:PeakDetectChl:B.PeakDetectVsDepth] Running Loop=1
2018-09-24T20:04:03.691Z,1537819443.691 [Science:PeakDetectChl:B.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-24T20:04:03.692Z,1537819443.692 [Science:Read_Oil] Running Loop=1
2018-09-24T20:04:03.692Z,1537819443.692 [Science:Read_Oil](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-24T20:04:03.694Z,1537819443.694 [Science:G] Running Loop=1
2018-09-24T20:04:03.694Z,1537819443.694 [Science:G](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-24T20:04:03.695Z,1537819443.695 [Science:F] Stopped
2018-09-24T20:04:03.695Z,1537819443.695 [Science:E] Stopped
2018-09-24T20:04:03.695Z,1537819443.695 [Science:D] Stopped
2018-09-24T20:04:03.695Z,1537819443.695 [Science:C] Stopped
2018-09-24T20:04:03.695Z,1537819443.695 [Science:B] Stopped
2018-09-24T20:04:03.695Z,1537819443.695 [Science:A] Stopped
2018-09-24T20:04:04.066Z,1537819444.066 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-24T20:04:04.066Z,1537819444.066 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-24T20:04:13.283Z,1537819453.283 [CommandLine](IMPORTANT): got command show best mass_concentration_of_chlorophyll_in_sea_water
2018-09-24T20:04:13.284Z,1537819453.284 [CommandLine](IMPORTANT): mass_concentration_of_chlorophyll_in_sea_water best is WetLabsSeaOWL_UV_A.mass_concentration_of_chlorophyll_in_sea_water
2018-09-24T20:04:13.284Z,1537819453.284 [CommandLine](IMPORTANT): got command get mass_concentration_of_chlorophyll_in_sea_water
2018-09-24T20:04:13.285Z,1537819453.285 [CommandLine](IMPORTANT): mass_concentration_of_chlorophyll_in_sea_water 4.878160 ug/l
2018-09-24T20:04:35.758Z,1537819475.758 [NAL9602](INFO): Powering down
2018-09-24T20:04:59.218Z,1537819499.218 [CommandLine](IMPORTANT): got command get depth
2018-09-24T20:04:59.218Z,1537819499.218 [CommandLine](IMPORTANT): depth 0.305382 m
2018-09-24T20:08:22.049Z,1537819702.049 [CommandLine](IMPORTANT): got command show variable sea_water_temp
2018-09-24T20:08:22.059Z,1537819702.059 [CommandLine](IMPORTANT): upward_derivative_of_sea_water_temperature (unknown)
2018-09-24T20:08:22.169Z,1537819702.169 [CommandLine](IMPORTANT): TempGradientCalculator.upward_derivative_of_sea_water_temperature (celsius_per_meter)
2018-09-24T20:08:45.923Z,1537819725.923 [CommandLine](IMPORTANT): got command show variable temperature
2018-09-24T20:08:45.946Z,1537819725.946 [CommandLine](IMPORTANT): platform_temperature (unknown)
2018-09-24T20:08:45.954Z,1537819725.954 [CommandLine](IMPORTANT): sea_water_potential_temperature (unknown)
2018-09-24T20:08:45.955Z,1537819725.955 [CommandLine](IMPORTANT): upward_derivative_of_sea_water_temperature (unknown)
2018-09-24T20:08:45.983Z,1537819725.983 [CommandLine](IMPORTANT): VerticalTemperatureHomogeneityIndexCalculator.loadAtStartup (bool)
2018-09-24T20:08:45.983Z,1537819725.983 [CommandLine](IMPORTANT): VerticalTemperatureHomogeneityIndexCalculator.verbosity (count)
2018-09-24T20:08:45.984Z,1537819725.984 [CommandLine](IMPORTANT): VerticalTemperatureHomogeneityIndexCalculator.depth1 (meter)
2018-09-24T20:08:45.984Z,1537819725.984 [CommandLine](IMPORTANT): VerticalTemperatureHomogeneityIndexCalculator.depth2 (meter)
2018-09-24T20:08:45.993Z,1537819725.993 [CommandLine](IMPORTANT): VerticalTemperatureHomogeneityIndexCalculator.depth3 (meter)
2018-09-24T20:08:45.994Z,1537819725.994 [CommandLine](IMPORTANT): VerticalTemperatureHomogeneityIndexCalculator.depth4 (meter)
2018-09-24T20:08:45.994Z,1537819725.994 [CommandLine](IMPORTANT): VerticalTemperatureHomogeneityIndexCalculator.depthWindow (meter)
2018-09-24T20:08:46.266Z,1537819726.266 [CommandLine](IMPORTANT): Onboard.Temperature (celsius)
2018-09-24T20:08:46.335Z,1537819726.335 [CommandLine](IMPORTANT): TempGradientCalculator.upward_derivative_of_sea_water_temperature (celsius_per_meter)
2018-09-24T20:08:46.373Z,1537819726.373 [CommandLine](IMPORTANT): AHRS_M2.CompassTemperature (celsius)
2018-09-24T20:08:46.572Z,1537819726.572 [CommandLine](IMPORTANT): Science.UpwardDerivativeOfTemperatureActive (bool)
2018-09-24T20:08:46.573Z,1537819726.573 [CommandLine](IMPORTANT): Science.PeakChlTemperature (celsius)
2018-09-24T20:12:47.497Z,1537819967.497 [CommandLine](IMPORTANT): got command show variable sea_water_temperature
2018-09-24T20:12:47.508Z,1537819967.508 [CommandLine](IMPORTANT): upward_derivative_of_sea_water_temperature (unknown)
2018-09-24T20:12:47.767Z,1537819967.767 [CommandLine](IMPORTANT): TempGradientCalculator.upward_derivative_of_sea_water_temperature (celsius_per_meter)
2018-09-24T20:14:33.597Z,1537820073.597 [RDI_Pathfinder](ERROR): only read 4 of 5 data items
2018-09-24T20:14:33.597Z,1537820073.597 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-3:BS,-3276,-32768,V
2018-09-24T20:15:56.045Z,1537820156.045 [CommandLine](IMPORTANT): got command show variable temperature
2018-09-24T20:15:56.055Z,1537820156.055 [CommandLine](IMPORTANT): platform_temperature (unknown)
2018-09-24T20:15:56.058Z,1537820156.058 [CommandLine](IMPORTANT): sea_water_potential_temperature (unknown)
2018-09-24T20:15:56.060Z,1537820156.060 [CommandLine](IMPORTANT): upward_derivative_of_sea_water_temperature (unknown)
2018-09-24T20:15:56.067Z,1537820156.067 [CommandLine](IMPORTANT): VerticalTemperatureHomogeneityIndexCalculator.loadAtStartup (bool)
2018-09-24T20:15:56.068Z,1537820156.068 [CommandLine](IMPORTANT): VerticalTemperatureHomogeneityIndexCalculator.verbosity (count)
2018-09-24T20:15:56.068Z,1537820156.068 [CommandLine](IMPORTANT): VerticalTemperatureHomogeneityIndexCalculator.depth1 (meter)
2018-09-24T20:15:56.069Z,1537820156.069 [CommandLine](IMPORTANT): VerticalTemperatureHomogeneityIndexCalculator.depth2 (meter)
2018-09-24T20:15:56.069Z,1537820156.069 [CommandLine](IMPORTANT): VerticalTemperatureHomogeneityIndexCalculator.depth3 (meter)
2018-09-24T20:15:56.070Z,1537820156.070 [CommandLine](IMPORTANT): VerticalTemperatureHomogeneityIndexCalculator.depth4 (meter)
2018-09-24T20:15:56.070Z,1537820156.070 [CommandLine](IMPORTANT): VerticalTemperatureHomogeneityIndexCalculator.depthWindow (meter)
2018-09-24T20:15:56.404Z,1537820156.404 [CommandLine](IMPORTANT): Onboard.Temperature (celsius)
2018-09-24T20:15:56.425Z,1537820156.425 [CommandLine](IMPORTANT): TempGradientCalculator.upward_derivative_of_sea_water_temperature (celsius_per_meter)
2018-09-24T20:15:56.444Z,1537820156.444 [CommandLine](IMPORTANT): AHRS_M2.CompassTemperature (celsius)
2018-09-24T20:15:56.590Z,1537820156.590 [CommandLine](IMPORTANT): Science.UpwardDerivativeOfTemperatureActive (bool)
2018-09-24T20:15:56.591Z,1537820156.591 [CommandLine](IMPORTANT): Science.PeakChlTemperature (celsius)
2018-09-24T20:16:13.401Z,1537820173.401 [DataOverHttps](IMPORTANT): SBD MTMSN=20180924T201604
2018-09-24T20:16:22.472Z,1537820182.472 [DataOverHttps](INFO): Received command:configSet CTD_NeilBrown.loadAtStartup 1 bool persist;configSet CTD_NeilBrown.simulateHardware 1 bool persist
2018-09-24T20:16:23.071Z,1537820183.071 [CommandLine](IMPORTANT): got command configSet CTD_NeilBrown.loadAtStartup 1.000000 bool persist
2018-09-24T20:16:23.071Z,1537820183.071 [CommandLine](IMPORTANT): configSet CTD_NeilBrown.loadAtStartup requires a restart to take effect.
2018-09-24T20:16:23.074Z,1537820183.074 [CommandLine](IMPORTANT): got command configSet CTD_NeilBrown.simulateHardware 1.000000 bool persist
2018-09-24T20:16:34.355Z,1537820194.355 [CommandLine](IMPORTANT): got command get AHRS_M2.CompassTemperature
2018-09-24T20:16:34.355Z,1537820194.355 [CommandLine](IMPORTANT): AHRS_M2.CompassTemperature 18.454706 degC
2018-09-24T20:16:46.828Z,1537820206.828 [CommandLine](IMPORTANT): got command get AHRS_M2.CompassTemperature fahrenheit
2018-09-24T20:16:46.828Z,1537820206.828 [CommandLine](IMPORTANT): AHRS_M2.CompassTemperature 65.212977 degF
2018-09-24T20:19:21.534Z,1537820361.534 [DataOverHttps](IMPORTANT): SBD MTMSN=20180924T201912
2018-09-24T20:19:27.779Z,1537820367.779 [DataOverHttps](INFO): Received command:restart app
2018-09-24T20:19:27.878Z,1537820367.878 [CommandLine](IMPORTANT): got command restart application
2018-09-24T20:19:28.881Z,1537820368.881 [Supervisor](INFO): Stop Mission called by Supervisor::terminate
2018-09-24T20:19:28.893Z,1537820368.893 [CommandLine ThreadHandler](INFO): Uninitializing protected caller thread.
2018-09-24T20:19:28.893Z,1537820368.893 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-09-24T20:19:28.913Z,1537820368.913 [Supervisor](DEBUG): Uninitializing supervisor and starting cleanup. Bye!
2018-09-24T20:19:28.913Z,1537820368.913 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-09-24T20:19:28.914Z,1537820368.914 [CommandLine](INFO): Join timeout helper Thread ID is 2919
2018-09-24T20:19:28.914Z,1537820368.914 [ComponentRegistry](INFO): Shutting down NavChartDb ThreadHandler
2018-09-24T20:19:28.914Z,1537820368.914 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-09-24T20:19:28.915Z,1537820368.915 [NavChartDb](INFO): Join timeout helper Thread ID is 2920
2018-09-24T20:19:29.020Z,1537820369.020 [MissionManager](INFO): MissionManager is completed.
2018-09-24T20:19:29.020Z,1537820369.020 [MissionManager](INFO): Uninitializing Mission Science
2018-09-24T20:19:29.020Z,1537820369.020 [Science] Stopped
2018-09-24T20:19:29.020Z,1537820369.020 [Science](DEBUG): Aggregate::uninitialize Science
2018-09-24T20:19:29.020Z,1537820369.020 [Science:G] Stopped
2018-09-24T20:19:29.020Z,1537820369.020 [Science:Read_Oil] Stopped
2018-09-24T20:19:29.020Z,1537820369.020 [Science:PeakDetectChl] Stopped
2018-09-24T20:19:29.021Z,1537820369.021 [Science:PeakDetectChl](DEBUG): Aggregate::uninitialize Science:PeakDetectChl
2018-09-24T20:19:29.021Z,1537820369.021 [Science:PeakDetectChl:B.PeakDetectVsDepth] Stopped
2018-09-24T20:19:29.021Z,1537820369.021 [Science:PeakDetectChl:B.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-24T20:19:29.229Z,1537820369.229 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-24T20:19:29.241Z,1537820369.241 [NavChartDb ThreadHandler](INFO): Uninitializing protected caller thread.
2018-09-24T20:19:29.241Z,1537820369.241 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-09-24T20:19:29.253Z,1537820369.253 [ComponentRegistry](INFO): Shutting down Radio_Surface ThreadHandler
2018-09-24T20:19:29.253Z,1537820369.253 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-09-24T20:19:29.253Z,1537820369.253 [Radio_Surface](INFO): Join timeout helper Thread ID is 2921
2018-09-24T20:19:29.257Z,1537820369.257 [Radio_Surface ThreadHandler](INFO): Uninitializing protected caller thread.
2018-09-24T20:19:29.257Z,1537820369.257 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-09-24T20:19:29.263Z,1537820369.263 [ComponentRegistry](INFO): Shutting down WetLabsSeaOWL_UV_A ThreadHandler
2018-09-24T20:19:29.263Z,1537820369.263 [WetLabsSeaOWL_UV_A ThreadHandler](INFO): Thread cancelled.
2018-09-24T20:19:29.263Z,1537820369.263 [WetLabsSeaOWL_UV_A](INFO): Join timeout helper Thread ID is 2922
2018-09-24T20:19:29.428Z,1537820369.428 [MissionManager](IMPORTANT): Started mission Default
2018-09-24T20:19:29.429Z,1537820369.429 [Default] Running Loop=1
2018-09-24T20:19:29.429Z,1537820369.429 [Default](DEBUG): Aggregate::initialize Default
2018-09-24T20:19:29.429Z,1537820369.429 [Default:B.GoToSurface] Running Loop=1
2018-09-24T20:19:29.429Z,1537820369.429 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-24T20:19:29.430Z,1537820369.430 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-24T20:19:29.430Z,1537820369.430 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-24T20:19:29.430Z,1537820369.430 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-24T20:19:29.431Z,1537820369.431 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-24T20:19:29.431Z,1537820369.431 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-24T20:19:29.432Z,1537820369.432 [Default:A.Wait] Running Loop=1
2018-09-24T20:19:29.432Z,1537820369.432 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-24T20:19:29.633Z,1537820369.633 [WetLabsSeaOWL_UV_A ThreadHandler](INFO): Uninitializing protected caller thread.
2018-09-24T20:19:29.633Z,1537820369.633 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-24T20:19:29.634Z,1537820369.634 [WetLabsSeaOWL_UV_A ThreadHandler](INFO): Thread cancelled.
2018-09-24T20:19:29.641Z,1537820369.641 [ComponentRegistry](INFO): Shutting down logger ThreadHandler
2018-09-24T20:19:29.641Z,1537820369.641 [logger ThreadHandler](INFO): Thread cancelled.
2018-09-24T20:19:29.641Z,1537820369.641 [logger](INFO): Join timeout helper Thread ID is 2923
2018-09-24T20:19:29.645Z,1537820369.645 [logger ThreadHandler](INFO): Uninitializing protected caller thread.
2018-09-24T20:19:29.645Z,1537820369.645 [logger ThreadHandler](INFO): Thread cancelled.
2018-09-24T20:19:29.662Z,1537820369.662 [ComponentRegistry](INFO): Shutting down CommandLine ThreadHandler
2018-09-24T20:19:29.662Z,1537820369.662 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-09-24T20:19:29.662Z,1537820369.662 [ComponentRegistry](INFO): Shutting down controlThread ThreadHandler
2018-09-24T20:19:29.662Z,1537820369.662 [controlThread ThreadHandler](INFO): Thread cancelled.
2018-09-24T20:19:29.662Z,1537820369.662 [controlThread](INFO): Join timeout helper Thread ID is 2924
2018-09-24T20:19:29.761Z,1537820369.761 [controlThread ThreadHandler](INFO): Uninitializing protected caller thread.
2018-09-24T20:19:29.761Z,1537820369.761 [controlThread](DEBUG): Uninitializing ControlThread
2018-09-24T20:19:29.762Z,1537820369.762 [AHRS_M2](INFO): Powering down
2018-09-24T20:19:29.834Z,1537820369.834 [NAL9602](INFO): Powering down
2018-09-24T20:19:29.905Z,1537820369.905 [RDI_Pathfinder](INFO): Powering down
2018-09-24T20:19:29.906Z,1537820369.906 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2018-09-24T20:19:29.907Z,1537820369.907 [ElevatorOffsetCalculator](DEBUG): Uninitializing ElevatorOffsetCalculator.
2018-09-24T20:19:29.908Z,1537820369.908 [NavChart](DEBUG): Uninitialize NavChart Navigation.
2018-09-24T20:19:29.909Z,1537820369.909 [MissionManager](INFO): Uninitializing Mission Default
2018-09-24T20:19:29.909Z,1537820369.909 [Default] Stopped
2018-09-24T20:19:29.909Z,1537820369.909 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-24T20:19:29.909Z,1537820369.909 [Default:A.Wait] Stopped
2018-09-24T20:19:29.909Z,1537820369.909 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-24T20:19:29.909Z,1537820369.909 [Default:B.GoToSurface] Stopped
2018-09-24T20:19:29.909Z,1537820369.909 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-24T20:19:29.913Z,1537820369.913 [VerticalControl](DEBUG): Uninitialize VerticalControlComponent.
2018-09-24T20:19:29.913Z,1537820369.913 [HorizontalControl](DEBUG): Uninitialize HorizontalControlComponent.
2018-09-24T20:19:29.913Z,1537820369.913 [SpeedControl](DEBUG): Uninitialize SpeedControlComponent.
2018-09-24T20:19:29.914Z,1537820369.914 [LoopControl](DEBUG): Uninitialize LoopControlComponent.
2018-09-24T20:19:29.914Z,1537820369.914 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-24T20:19:29.914Z,1537820369.914 [BuoyancyServo](INFO): Powering down
2018-09-24T20:19:29.929Z,1537820369.929 [ElevatorServo](DEBUG): Uninitialize Elevator Servo.
2018-09-24T20:19:29.929Z,1537820369.929 [ElevatorServo](INFO): Powering down
2018-09-24T20:19:29.930Z,1537820369.930 [MassServo](DEBUG): Uninitialize Mass Servo.
2018-09-24T20:19:29.930Z,1537820369.930 [MassServo](INFO): Powering down
2018-09-24T20:19:29.931Z,1537820369.931 [RudderServo](DEBUG): Uninitialize Rudder Servo.
2018-09-24T20:19:29.931Z,1537820369.931 [RudderServo](INFO): Powering down
2018-09-24T20:19:29.932Z,1537820369.932 [ThrusterServo](DEBUG): Uninitialize Thruster Servo.
2018-09-24T20:19:29.932Z,1537820369.932 [ThrusterServo](INFO): Powering down
2018-09-24T20:19:29.933Z,1537820369.933 [SBIT](DEBUG): Uninitialize SBIT Component.
2018-09-24T20:19:29.933Z,1537820369.933 [IBIT](DEBUG): Uninitialize IBIT Component.
2018-09-24T20:19:29.934Z,1537820369.934 [CBIT](DEBUG): Uninitialize CBIT Component.
2018-09-24T20:19:29.935Z,1537820369.935 [controlThread ThreadHandler](INFO): Thread cancelled.
2018-09-24T20:19:29.987Z,1537820369.987 [WetLabsSeaOWL_UV_A ThreadHandler](INFO): Thread cancelled.
2018-09-24T20:19:30.046Z,1537820370.046 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-09-24T20:19:30.089Z,1537820370.089 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-09-24T20:19:30.157Z,1537820370.157 [logger ThreadHandler](INFO): Thread cancelled.