2018-09-26T19:07:06.050Z,1537988826.050 [CommandLine](IMPORTANT): got command restart logs
2018-09-26T19:10:02.968Z,1537989002.968 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,   +43,   +60,   -23,    -2,A
2018-09-26T19:10:12.163Z,1537989012.163 [Default:CheckIn:C.Wait](INFO): Done Waiting.
2018-09-26T19:10:12.163Z,1537989012.163 [Default:CheckIn:C.Wait] Stopped
2018-09-26T19:10:12.163Z,1537989012.163 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-26T19:10:12.163Z,1537989012.163 [Default:CheckIn:D] Running Loop=1
2018-09-26T19:10:12.553Z,1537989012.553 [Default:CheckIn:D] Stopped
2018-09-26T19:10:12.553Z,1537989012.553 [Default:CheckIn:E] Running Loop=1
2018-09-26T19:10:12.993Z,1537989012.993 [Default:CheckIn:E](IMPORTANT): Default mission has been running for 82.229932 min 
2018-09-26T19:10:12.994Z,1537989012.994 [Default:CheckIn:E] Stopped
2018-09-26T19:10:12.994Z,1537989012.994 [Default:CheckIn](INFO): Completed Default:CheckIn
2018-09-26T19:10:12.994Z,1537989012.994 [Default:CheckIn] Stopped
2018-09-26T19:10:12.994Z,1537989012.994 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-26T19:10:12.994Z,1537989012.994 [Default:CheckIn](INFO): Running loop #12
2018-09-26T19:10:12.995Z,1537989012.995 [Default:CheckIn] Running Loop=12
2018-09-26T19:10:12.995Z,1537989012.995 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-26T19:10:12.995Z,1537989012.995 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-26T19:10:13.710Z,1537989013.710 [NAL9602](INFO): Powering up
2018-09-26T19:10:24.510Z,1537989024.510 [NAL9602](INFO): NAL9602 initialized
2018-09-26T19:10:38.239Z,1537989038.239 [DataOverHttps](IMPORTANT): SBD MTMSN=20180926T191038
2018-09-26T19:10:42.422Z,1537989042.422 [DataOverHttps](INFO): Received command:sched asap "load Science/trackPatchFDOM.xml;set trackPatchFDOM.MaxDepth 15 meter;set trackPatchFDOM.MinOffshore 1000 meter;set trackPatchFDOM.NeedCommsTime 20 minute;set trackPatchFDOM.MissionTimeout 3 hour" 1h9k 1 2
2018-09-26T19:10:42.490Z,1537989042.490 [CommandLine](IMPORTANT): got command schedule asap "load Science/trackPatchFDOM.xml;set trackPatchFDOM.MaxDepth 15 meter;set trackPatchFDOM.MinOffshore 1000 meter;set trackPatchFDOM.NeedCommsTime 20 minute;set trackPatchFDOM.MissionTimeout 3 hour" 1h9k 1 2.000000
2018-09-26T19:10:42.490Z,1537989042.490 [CommandLine](IMPORTANT): Scheduling command #1 of 2 with id=1h9k
2018-09-26T19:10:42.491Z,1537989042.491 [CommandLine](IMPORTANT): Scheduled #1 (#1 of 2 with id='1h9k'): "load Science/trackPatchFDOM.xml;set trackPatchFDOM.MaxDepth 15 meter;set trackPatchFDOM.MinOffshore 1000 meter;set trackPatchFDOM.NeedCommsTime 20 minute;set trackPatchFDOM.MissionTimeout 3 hour" ASAP
2018-09-26T19:10:43.190Z,1537989043.190 [DataOverHttps](IMPORTANT): SBD MTMSN=20180926T191043
2018-09-26T19:10:47.191Z,1537989047.191 [NAL9602](INFO): SBD MO Status=2, MOMSN=1727, MT Status=2, MTMSN=0
2018-09-26T19:10:47.192Z,1537989047.192 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-26T19:10:47.355Z,1537989047.355 [DataOverHttps](INFO): Received command:sched asap "set trackPatchFDOM.YoYoMinDepth .3 meter;set trackPatchFDOM.YoYoMaxDepth 4 meter;set trackPatchFDOM.WpMaxDistance 200 meter;set trackPatchFDOM.WpTimeout 15 minute;run " 1h9k 2 2
2018-09-26T19:10:47.398Z,1537989047.398 [CommandLine](IMPORTANT): got command schedule asap "set trackPatchFDOM.YoYoMinDepth .3 meter;set trackPatchFDOM.YoYoMaxDepth 4 meter;set trackPatchFDOM.WpMaxDistance 200 meter;set trackPatchFDOM.WpTimeout 15 minute;run " 1h9k 2 2.000000
2018-09-26T19:10:47.398Z,1537989047.398 [CommandLine](IMPORTANT): Scheduling command #2 of 2 with id=1h9k
2018-09-26T19:10:47.399Z,1537989047.399 [CommandLine](IMPORTANT): Scheduled #2 (#2 of 2 with id='1h9k'): "set trackPatchFDOM.YoYoMinDepth .3 meter;set trackPatchFDOM.YoYoMaxDepth 4 meter;set trackPatchFDOM.WpMaxDistance 200 meter;set trackPatchFDOM.WpTimeout 15 minute;run " ASAP
2018-09-26T19:10:47.493Z,1537989047.493 [CommandLine](IMPORTANT): got command load ./Missions/Science/trackPatchFDOM.xml
2018-09-26T19:10:47.494Z,1537989047.494 [MissionManager](INFO): Loading Mission: ./Missions/Science/trackPatchFDOM.xml
2018-09-26T19:10:47.871Z,1537989047.871 [MissionManager](INFO): DefineArg trackPatchFDOM.MinAltitude = 5.000000 m
2018-09-26T19:10:47.874Z,1537989047.874 [MissionManager](INFO): DefineArg trackPatchFDOM.MaxDepth = 65.000000 m
2018-09-26T19:10:47.877Z,1537989047.877 [MissionManager](INFO): DefineArg trackPatchFDOM.MinWaterDepth = 10.000000 m
2018-09-26T19:10:47.880Z,1537989047.880 [MissionManager](INFO): DefineArg trackPatchFDOM.MinOffshore = 2000.000000 m
2018-09-26T19:10:47.883Z,1537989047.883 [MissionManager](INFO): DefineArg trackPatchFDOM.NeedCommsTime = 180.000000 min
2018-09-26T19:10:47.899Z,1537989047.899 [MissionManager](INFO): DefineArg trackPatchFDOM.MissionTimeout = 56.000000 h
2018-09-26T19:10:47.922Z,1537989047.922 [MissionManager](INFO): DefineArg trackPatchFDOM.MassDefault = 0.200000 cm
2018-09-26T19:10:47.939Z,1537989047.939 [MissionManager](INFO): DefineArg trackPatchFDOM.BuoyancyNeutral = 274.999999 cc
2018-09-26T19:10:47.952Z,1537989047.952 [MissionManager](INFO): DefineArg trackPatchFDOM.YoYoMinDepth = 5.000000 m
2018-09-26T19:10:47.964Z,1537989047.964 [MissionManager](INFO): DefineArg trackPatchFDOM.YoYoMaxDepth = 25.000000 m
2018-09-26T19:10:47.971Z,1537989047.971 [MissionManager](INFO): DefineArg trackPatchFDOM.YoYoUpPitch = 20.000000 arcdeg
2018-09-26T19:10:47.975Z,1537989047.975 [MissionManager](INFO): DefineArg trackPatchFDOM.YoYoDownPitch = -20.000000 arcdeg
2018-09-26T19:10:47.986Z,1537989047.986 [MissionManager](INFO): DefineArg trackPatchFDOM.Speed = 1.000000 m/s
2018-09-26T19:10:47.994Z,1537989047.994 [MissionManager](INFO): DefineArg trackPatchFDOM.WpMaxDistance = 1000.000000 m
2018-09-26T19:10:47.997Z,1537989047.997 [MissionManager](INFO): DefineArg trackPatchFDOM.WpTimeout = 8000.000000 s
2018-09-26T19:10:47.000Z,1537989048.000 [MissionManager](INFO): DefineArg trackPatchFDOM.WaterFrame = 1 bool
2018-09-26T19:10:48.003Z,1537989048.003 [MissionManager](INFO): DefineArg trackPatchFDOM.Repeat = 20.000000 count
2018-09-26T19:10:48.026Z,1537989048.026 [MissionManager](INFO): DefineArg trackPatchFDOM.Turn = 144.000000 arcdeg
2018-09-26T19:10:48.029Z,1537989048.029 [MissionManager](INFO): DefineArg trackPatchFDOM.Reverse = 180.000000 arcdeg
2018-09-26T19:10:48.032Z,1537989048.032 [MissionManager](INFO): DefineArg trackPatchFDOM.TwoPi = 360.000000 arcdeg
2018-09-26T19:10:48.035Z,1537989048.035 [MissionManager](INFO): DefineArg trackPatchFDOM.TimeWindowPeakRpt = nan min
2018-09-26T19:10:48.050Z,1537989048.050 [MissionManager](INFO): DefineArg trackPatchFDOM.LowPassWindowLen = 20.000000 count
2018-09-26T19:10:48.053Z,1537989048.053 [MissionManager](INFO): DefineArg trackPatchFDOM.PeakShallowBnd = 2.000000 m
2018-09-26T19:10:48.056Z,1537989048.056 [MissionManager](INFO): DefineArg trackPatchFDOM.PeakDeepBnd = 4.000000 m
2018-09-26T19:10:48.059Z,1537989048.059 [MissionManager](INFO): DefineArg trackPatchFDOM.FilterWidth = 4.000000 count
2018-09-26T19:10:48.079Z,1537989048.079 [MissionManager](INFO): DefineArg trackPatchFDOM.BeginThreshold = nan ug/l
2018-09-26T19:10:48.083Z,1537989048.083 [MissionManager](INFO): DefineArg trackPatchFDOM.OffPeakFraction = 80.000000 %
2018-09-26T19:10:48.085Z,1537989048.085 [MissionManager](INFO): DefineArg trackPatchFDOM.PatchMode = 0 bool
2018-09-26T19:10:48.088Z,1537989048.088 [MissionManager](INFO): DefineArg trackPatchFDOM.PatchTrackingHorizontal = 1 bool
2018-09-26T19:10:48.146Z,1537989048.146 [MissionManager](INFO): DefineArg trackPatchFDOM.WpBearing = -90.000000 arcdeg
2018-09-26T19:10:48.157Z,1537989048.157 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchDetectOn = 0 bool
2018-09-26T19:10:48.160Z,1537989048.160 [MissionManager](INFO): DefineOutput trackPatchFDOM.WpDone = 0 bool
2018-09-26T19:10:48.172Z,1537989048.172 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchFDOM = nan ug/l
2018-09-26T19:10:48.183Z,1537989048.183 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchFDOMDepth = nan m
2018-09-26T19:10:48.191Z,1537989048.191 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchFDOMLatitude = nan arcdeg
2018-09-26T19:10:48.210Z,1537989048.210 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchFDOMLongitude = nan arcdeg
2018-09-26T19:10:48.218Z,1537989048.218 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchFDOMDistance = 0.000000 m
2018-09-26T19:10:48.219Z,1537989048.219 [trackPatchFDOM:A.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-26T19:10:48.246Z,1537989048.246 [trackPatchFDOM:B.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-26T19:10:48.262Z,1537989048.262 [MissionManager](INFO): Inserting Stack: Missions/Insert/Surface.xml
2018-09-26T19:10:48.310Z,1537989048.310 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceCommsSplit.SurfaceDepthRate = nan m/s
2018-09-26T19:10:48.322Z,1537989048.322 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceCommsSplit.SurfacePitch = 20.000000 arcdeg
2018-09-26T19:10:48.325Z,1537989048.325 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceCommsSplit.SurfaceSpeed = 1.000000 m/s
2018-09-26T19:10:48.328Z,1537989048.328 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceCommsSplit.IridiumTimeout = 30.000000 min
2018-09-26T19:10:48.331Z,1537989048.331 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceCommsSplit.UnpackSplitAtSurface = 0 bool
2018-09-26T19:10:48.332Z,1537989048.332 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-26T19:10:48.391Z,1537989048.391 [MissionManager](INFO): RedefineArg trackPatchFDOM:SurfaceCommsSplit.SurfacePitch = value:20.000000 arcdeg
2018-09-26T19:10:48.393Z,1537989048.393 [MissionManager](INFO): RedefineArg trackPatchFDOM:SurfaceCommsSplit.SurfaceSpeed = value:1.000000 m/s
2018-09-26T19:10:48.395Z,1537989048.395 [MissionManager](INFO): RedefineArg trackPatchFDOM:SurfaceCommsSplit.UnpackSplitAtSurface = value:1 bool
2018-09-26T19:10:48.396Z,1537989048.396 [MissionManager](INFO): Inserting Stack: Missions/Insert/Surface.xml
2018-09-26T19:10:48.439Z,1537989048.439 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.SurfaceDepthRate = nan m/s
2018-09-26T19:10:48.463Z,1537989048.463 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.SurfacePitch = 20.000000 arcdeg
2018-09-26T19:10:48.466Z,1537989048.466 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.SurfaceSpeed = 1.000000 m/s
2018-09-26T19:10:48.473Z,1537989048.473 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.IridiumTimeout = 30.000000 min
2018-09-26T19:10:48.476Z,1537989048.476 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.UnpackSplitAtSurface = 0 bool
2018-09-26T19:10:48.477Z,1537989048.477 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-26T19:10:48.551Z,1537989048.551 [MissionManager](INFO): RedefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.SurfacePitch = value:20.000000 arcdeg
2018-09-26T19:10:48.559Z,1537989048.559 [MissionManager](INFO): RedefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.SurfaceSpeed = value:1.000000 m/s
2018-09-26T19:10:48.586Z,1537989048.586 [trackPatchFDOM:F.OffshoreEnvelope](DEBUG): Construct OffshoreEnvelope.
2018-09-26T19:10:48.601Z,1537989048.601 [trackPatchFDOM:G.WaterDepthEnvelope](DEBUG): Construct WaterDepthEnvelope.
2018-09-26T19:10:48.611Z,1537989048.611 [trackPatchFDOM:H.Pitch](DEBUG): Construct.
2018-09-26T19:10:48.625Z,1537989048.625 [trackPatchFDOM:I.Buoyancy](DEBUG): Construct Buoyancy.
2018-09-26T19:10:48.628Z,1537989048.628 [MissionManager](INFO): Inserting Stack: Missions/Insert/Science.xml
2018-09-26T19:10:49.042Z,1537989049.042 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.SampleISUS = 0 bool
2018-09-26T19:10:49.049Z,1537989049.049 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.SampleISUSmaxPitch = 60.000000 arcdeg
2018-09-26T19:10:49.052Z,1537989049.052 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.SampleISUSminPitch = -60.000000 arcdeg
2018-09-26T19:10:49.059Z,1537989049.059 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakDetectChlActive = 0 bool
2018-09-26T19:10:49.063Z,1537989049.063 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.TimeWindowPeakReport = nan min
2018-09-26T19:10:49.078Z,1537989049.078 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.HighestChlPeakReportActive = 0 bool
2018-09-26T19:10:49.080Z,1537989049.080 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PatchTracking = 0 bool
2018-09-26T19:10:49.088Z,1537989049.088 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.FilterWidthHorizontal = 3.000000 count
2018-09-26T19:10:49.092Z,1537989049.092 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.NumProfilesSlidingwindow = 100.000000 count
2018-09-26T19:10:49.103Z,1537989049.103 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.OffPeakFractionHorizontal = 80.000000 %
2018-09-26T19:10:49.108Z,1537989049.108 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakDetectNO3Active = 0 bool
2018-09-26T19:10:49.126Z,1537989049.126 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakDetectOilActive = 0 bool
2018-09-26T19:10:49.133Z,1537989049.133 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakDetectFDOMActive = 0 bool
2018-09-26T19:10:49.136Z,1537989049.136 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.UpwardDerivativeOfTemperatureActive = 0 bool
2018-09-26T19:10:49.144Z,1537989049.144 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledAanderaaO2 = 1.000000 bool
2018-09-26T19:10:49.148Z,1537989049.148 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledNeilBrown = 1.000000 bool
2018-09-26T19:10:49.163Z,1537989049.163 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledSeabird = 0.000000 bool
2018-09-26T19:10:49.167Z,1537989049.167 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledTurbulence_NPS = 0.000000 bool
2018-09-26T19:10:49.170Z,1537989049.170 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledWetLabsBB2FL = 0.000000 bool
2018-09-26T19:10:49.185Z,1537989049.185 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledWetLabsSeaOWL_UV_A = 1.000000 bool
2018-09-26T19:10:49.189Z,1537989049.189 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledISUS = 0.000000 bool
2018-09-26T19:10:49.192Z,1537989049.192 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.LowPassWindowLength = 20.000000 count
2018-09-26T19:10:49.195Z,1537989049.195 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakChlShallowBound = nan m
2018-09-26T19:10:49.210Z,1537989049.210 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakChlDeepBound = nan m
2018-09-26T19:10:49.213Z,1537989049.213 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakShallowBound = nan m
2018-09-26T19:10:49.216Z,1537989049.216 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakDeepBound = nan m
2018-09-26T19:10:49.219Z,1537989049.219 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakChl = 0.000000 ug/l
2018-09-26T19:10:49.234Z,1537989049.234 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakChlDepth = 0.000000 m
2018-09-26T19:10:49.237Z,1537989049.237 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakChlTemperature = 0.000000 degC
2018-09-26T19:10:49.240Z,1537989049.240 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakChlLatitude = nan arcdeg
2018-09-26T19:10:49.266Z,1537989049.266 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakChlLongitude = nan arcdeg
2018-09-26T19:10:49.269Z,1537989049.269 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakNO3 = 0.000000 umol/l
2018-09-26T19:10:49.272Z,1537989049.272 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakNO3Depth = 0.000000 m
2018-09-26T19:10:49.288Z,1537989049.288 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakNO3Latitude = nan arcdeg
2018-09-26T19:10:49.326Z,1537989049.326 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakNO3Longitude = nan arcdeg
2018-09-26T19:10:49.329Z,1537989049.329 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchChl = 0.000000 m
2018-09-26T19:10:49.332Z,1537989049.332 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchChlDepth = 0.000000 m
2018-09-26T19:10:49.363Z,1537989049.363 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchChlLatitude = nan arcdeg
2018-09-26T19:10:49.370Z,1537989049.370 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchChlLongitude = nan arcdeg
2018-09-26T19:10:49.383Z,1537989049.383 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchChlDistance = nan m
2018-09-26T19:10:49.395Z,1537989049.395 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakOil = 0.000000 kg/m3
2018-09-26T19:10:49.402Z,1537989049.402 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakOilDepth = 0.000000 m
2018-09-26T19:10:49.418Z,1537989049.418 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakOilLatitude = nan arcdeg
2018-09-26T19:10:49.421Z,1537989049.421 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakOilLongitude = nan arcdeg
2018-09-26T19:10:49.424Z,1537989049.424 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakFDOM = 0.000000 ppb
2018-09-26T19:10:49.431Z,1537989049.431 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakFDOMDepth = 0.000000 m
2018-09-26T19:10:49.435Z,1537989049.435 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakFDOMLatitude = nan arcdeg
2018-09-26T19:10:49.446Z,1537989049.446 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakFDOMLongitude = nan arcdeg
2018-09-26T19:10:49.453Z,1537989049.453 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchFDOMDistance = nan m
2018-09-26T19:10:49.488Z,1537989049.488 [trackPatchFDOM:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-26T19:10:49.517Z,1537989049.517 [trackPatchFDOM:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-26T19:10:49.550Z,1537989049.550 [trackPatchFDOM:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-26T19:10:49.560Z,1537989049.560 [trackPatchFDOM:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-26T19:10:49.591Z,1537989049.591 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-26T19:10:49.603Z,1537989049.603 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.PeakDetectFDOMActive = value:1 bool
2018-09-26T19:10:49.627Z,1537989049.627 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.TimeWindowPeakReport = reader:trackPatchFDOM.TimeWindowPeakRpt
2018-09-26T19:10:49.629Z,1537989049.629 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.PatchTracking = value:1 bool
2018-09-26T19:10:49.630Z,1537989049.630 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.LowPassWindowLength = reader:trackPatchFDOM.LowPassWindowLen
2018-09-26T19:10:49.632Z,1537989049.632 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.PeakShallowBound = reader:trackPatchFDOM.PeakShallowBnd
2018-09-26T19:10:49.634Z,1537989049.634 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.PeakDeepBound = reader:trackPatchFDOM.PeakDeepBnd
2018-09-26T19:10:49.636Z,1537989049.636 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.OffPeakFractionHorizontal = reader:trackPatchFDOM.OffPeakFraction
2018-09-26T19:10:49.649Z,1537989049.649 [trackPatchFDOM:K.SetSpeed](DEBUG): Construct.
2018-09-26T19:10:49.652Z,1537989049.652 [trackPatchFDOM:L.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-26T19:10:49.675Z,1537989049.675 [trackPatchFDOM:M.YoYo](DEBUG): Construct YoYo.
2018-09-26T19:10:49.697Z,1537989049.697 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-26T19:10:49.817Z,1537989049.817 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-26T19:10:49.834Z,1537989049.834 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-26T19:10:49.871Z,1537989049.871 [trackPatchFDOM:PatchDetectHorizontal:InLegWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-26T19:10:49.949Z,1537989049.949 [trackPatchFDOM:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-26T19:10:50.078Z,1537989050.078 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Trigger="Tethys/Trigger" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Trigger http://okeanids.mbari.org/tethys/Xml/Trigger.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="trackPatchFDOM">

    <Description>
        Vehicle runs yo-yos, with patch detect enabled for FDOM
        concentration_of_colored_dissolved_organic_matter_in_sea_water_expressed_as_equivalent_mass_fraction_of_quinine_sulfate_dihydrate
        concentration.
    </Description>

<!-- Vehicle safety parameters -->

    <DefineArg Name="MinAltitude"><Description>
        Minimum altitude for the entire mission.
    </Description><Units:meter/><Value>5</Value></DefineArg>

    <DefineArg Name="MaxDepth"><Description>
        Maximum depth for the entire mission.
    </Description><Units:meter/><Value>65</Value></DefineArg>

    <DefineArg Name="MinWaterDepth"><Description>
        Minimum water depth for the entire mission.
    </Description><Units:meter/><Value>10</Value></DefineArg>

    <DefineArg Name="MinOffshore"><Description>
        Minimum offshore distance for the entire mission.
    </Description><Units:meter/><Value>2000</Value></DefineArg>

    <DefineArg Name="NeedCommsTime"><Description>
        Maximum time between surfacings for communications
    </Description><Units:minute/><Value>180</Value></DefineArg>

    <DefineArg Name="MissionTimeout"><Description>
        Timeout for the entire mission
    </Description><Units:hour/><Value>56</Value></DefineArg>

    <DefineArg Name="MassDefault"><Description>
        Static setting for mass during the mission. Defaults to massDefault
        setting in the Config/Control.cfg file.
    </Description><Control:VerticalControl.massDefault/></DefineArg>

    <DefineArg Name="BuoyancyNeutral"><Description>
        Buoyancy bladder position while performing the YoYo behavior. Defaults
        to buoyancyNeutral setting in the Config/Control.cfg file.
    </Description><Control:VerticalControl.buoyancyNeutral/></DefineArg>

<!-- Basic guidance settings -->

    <DefineArg Name="YoYoMinDepth"><Description>
        Minimum depth during yo-yo's.
    </Description><Units:meter/><Value>5.0</Value></DefineArg>

    <DefineArg Name="YoYoMaxDepth"><Description>
        Maximum depth during yo-yo's.
    </Description><Units:meter/><Value>25.0</Value></DefineArg>

    <DefineArg Name="YoYoUpPitch"><Description>
        Pitch when yo-yo's are ascending.
    </Description><Units:degree/><Value>20.0</Value></DefineArg>

    <DefineArg Name="YoYoDownPitch"><Description>
        Pitch when yo-yo's are descending.
    </Description><Units:degree/><Value>-20.0</Value></DefineArg>

    <DefineArg Name="Speed"><Description>
        Vehicle speed.
    </Description><Units:meter_per_second/><Value>1</Value></DefineArg>

    <DefineArg Name="WpMaxDistance"><Description>
        Maximum length of each tracking leg
<!--debug
    </Description><Units:meter/><Value>7500</Value></DefineArg>
-->
    </Description><Units:meter/><Value>1000</Value></DefineArg>

    <DefineArg Name="WpTimeout"><Description>
        Maximum duration of each tracking leg
    </Description><Units:second/><Value>8000</Value></DefineArg>

    <DefineArg Name="WaterFrame"><Description>
        Set WaterFrame true to drive towards waypoints in the water frame of
        reference
    </Description><True/></DefineArg>

    <DefineArg Name="Repeat"><Description>
        Maximum number of tracking legs
    </Description><Units:count/><Value>20</Value></DefineArg>

<!-- Constant settings for each tracking leg -->

    <DefineArg Name="Turn"><Description>
        Amount to turn at each leg
    </Description><Units:degree/><Value>144</Value></DefineArg>

    <DefineArg Name="Reverse"><Description>
        Change in bearing which reverses vehicle direction
    </Description><Units:degree/><Value>180</Value></DefineArg>

    <DefineArg Name="TwoPi"><Description>
        Applied to stop run-up of angles
    </Description><Units:degree/><Value>360</Value></DefineArg>

    <DefineArg Name="TimeWindowPeakRpt"><Description>
        If greater than zero, report a peak every window. If NaN or zero, this
        variable is ignored.
    </Description><Units:minute/><Value>NaN</Value></DefineArg>

<!--debug
    </Description><Units:minute/><Value>1</Value></DefineArg>
-->

    <DefineArg Name="LowPassWindowLen"><Description>
        Low-pass window length (based on depth sensor sampling interval 0.4
        second) for low-pass filtering.
    </Description><Units:count/><Value>20</Value></DefineArg>

    <DefineArg Name="PeakShallowBnd"><Description>
        Shallow depth bound for detecting peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>2</Value></DefineArg>

    <DefineArg Name="PeakDeepBnd"><Description>
        Deep depth bound for detecting peak on each descent or ascent profile.
    </Description><Units:meter/><Value>4</Value></DefineArg>

    <DefineArg Name="FilterWidth"><Description>
        Width of boxcar filter used in horizontal patch detection
    </Description><Units:count/><Value>4</Value></DefineArg>

    <DefineArg Name="BeginThreshold"><Description>
        If non-NaN, sets threshold for starting horizontal patch detection
    </Description><Units:microgram_per_liter/><Value>NaN</Value></DefineArg>

    <DefineArg Name="OffPeakFraction"><Description>
        When filtered horizontal value is this fraction of the peak, consider it
        outside the patch.
    </Description><Units:percent/><Value>80</Value></DefineArg>

    <DefineArg Name="PatchMode"><Description>
        If true, use center of "in peak" range as the turn-around point. If
        false use maximum horizontal peak location as the turn-around point.
    </Description><False/></DefineArg>

    <DefineArg Name="PatchTrackingHorizontal"><Description>
        Set true to turn on horizontal patch tracking
    </Description><True/></DefineArg>

<!-- Variable Settings for each tracking leg -->

    <DefineArg Name="WpBearing"><Description>
        Bearing being followed in the current leg. Set this to initialize start
        direction of patch tracking.
    </Description><Units:degree/><Value>-90</Value></DefineArg>

    <DefineOutput Name="PatchDetectOn"><Description>
        Mission sets this to true when the patch has been crossed.
    </Description><False/></DefineOutput>

    <DefineOutput Name="WpDone"><Description>
        Mission sets this to true when the cross-patch waypoint has been
        reached.
    </Description><False/></DefineOutput>

    <DefineOutput Name="PatchFDOM"><Units:microgram_per_liter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchFDOMDepth"><Units:meter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchFDOMLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchFDOMLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchFDOMDistance"><Units:meter/><Value>0</Value></DefineOutput>

<!-- The timeout -->

    <Timeout Duration="MissionTimeout"/>

<!-- And now the mission -->

    <Guidance:AltitudeEnvelope>
        <Parallel/>
        <Setting><Guidance:AltitudeEnvelope.minAltitude/><Arg Name="MinAltitude"/></Setting>
    </Guidance:AltitudeEnvelope>

    <Guidance:DepthEnvelope>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="MaxDepth"/></Setting>
    </Guidance:DepthEnvelope>

    <Insert Filename="Insert/Surface.xml" Id="SurfaceCommsSplit">
        <RedefineArg Name="SurfacePitch"><Units:degree/><Value>20</Value></RedefineArg>
        <RedefineArg Name="SurfaceSpeed"><Units:meter_per_second/><Value>1</Value></RedefineArg>
        <RedefineArg Name="UnpackSplitAtSurface"><True/></RedefineArg>
    </Insert>

    <Aggregate Id="SurfaceComms">

        <When>
            <Called/>
        </When>

        <Insert Filename="Insert/Surface.xml">
            <RedefineArg Name="SurfacePitch"><Units:degree/><Value>20</Value></RedefineArg>
            <RedefineArg Name="SurfaceSpeed"><Units:meter_per_second/><Value>1</Value></RedefineArg>
        </Insert>

    </Aggregate>

<!-- GPS Update.  Don't go too long w/o a GPS fix. -->

    <Aggregate Id="NeedComms">

        <When>
            <Universal:platform_pitch_angle/>
            <Gt><Units:degree/><Value>0</Value></Gt>
            <And><Elapsed><Universal:time_fix/></Elapsed><Gt><Arg Name="NeedCommsTime"/></Gt></And>
            <Or><Elapsed><Universal:time_fix/></Elapsed><Gt><Arg Name="NeedCommsTime"/><Add><Units:minute/><Value>10</Value></Add></Gt></Or>
        </When>

        <Syslog Severity="Important">NeedComms Timeout Surfacing</Syslog>

        <Call RefId="SurfaceComms"/>

    </Aggregate>

    <Guidance:OffshoreEnvelope>
        <Parallel/>
        <Setting><Guidance:OffshoreEnvelope.minOffshore/><Arg Name="MinOffshore"/></Setting>
    </Guidance:OffshoreEnvelope>

    <Guidance:WaterDepthEnvelope>
        <Parallel/>
        <Setting><Guidance:WaterDepthEnvelope.minWaterDepth/><Arg Name="MinWaterDepth"/></Setting>
    </Guidance:WaterDepthEnvelope>

    <Guidance:Pitch>
        <Parallel/>
        <Setting><Guidance:Pitch.massPosition/><Arg Name="MassDefault"/></Setting>
    </Guidance:Pitch>

    <Guidance:Buoyancy>
        <Parallel/>
        <Setting><Guidance:Buoyancy.position /><Arg Name="BuoyancyNeutral"/></Setting>
    </Guidance:Buoyancy>

<!-- If we're executing here or below, lets' get science data! -->

    <Insert Filename="Insert/Science.xml">
        <RedefineArg Name="PeakDetectFDOMActive"><True/></RedefineArg>
        <RedefineArg Name="TimeWindowPeakReport"><Arg Name="TimeWindowPeakRpt"/></RedefineArg>
        <RedefineArg Name="PatchTracking"><True/></RedefineArg>
        <RedefineArg Name="LowPassWindowLength"><Arg Name="LowPassWindowLen"/></RedefineArg>
        <RedefineArg Name="PeakShallowBound"><Arg Name="PeakShallowBnd"/></RedefineArg>
        <RedefineArg Name="PeakDeepBound"><Arg Name="PeakDeepBnd"/></RedefineArg>
        <RedefineArg Name="OffPeakFractionHorizontal"><Arg Name="OffPeakFraction"/></RedefineArg>
    </Insert>

    <Guidance:SetSpeed>
        <Parallel/>
        <Setting><Guidance:SetSpeed.speed/><Arg Name="Speed"/></Setting>
    </Guidance:SetSpeed>

    <Guidance:DepthEnvelope>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.minDepth/><Arg Name="YoYoMinDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="YoYoMaxDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:DepthEnvelope.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:DepthEnvelope>

    <Guidance:YoYo>
        <Parallel/>
        <Setting><Guidance:YoYo.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:YoYo.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:YoYo>

    <Aggregate Id="PatchDetectHorizontal">

        <Sequence Repeat="Repeat"/>

        <Aggregate Id="PatchDetection">

            <When>
                <Arg Name="PatchDetectOn"/>
            </When>

            <Trigger:PeakDetectHorizontal Id="PeakDetectHorizontalTrigger">
                <Sequence/>
                <Break><Arg Name="WpDone"/>
                </Break>
                <Setting><Trigger:PeakDetectHorizontal.patchTracking/><Arg Name="PatchTrackingHorizontal"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.detectFrom/><Arg Name="Science:PeakFDOM"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.depthFrom/><Arg Name="Science:PeakFDOMDepth"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.latitudeFrom/><Arg Name="Science:PeakFDOMLatitude"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.longitudeFrom/><Arg Name="Science:PeakFDOMLongitude"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.beginThreshold/><Arg Name="BeginThreshold"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.offPeakFraction/><Arg Name="OffPeakFraction"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.filterWidth/><Arg Name="FilterWidth"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.centerPeak/><Arg Name="PatchMode"/></Setting>
                <OutputArg Name="PatchFDOM"><Trigger:PeakDetectHorizontal.peakDetect/></OutputArg>
                <OutputArg Name="PatchFDOMDepth"><Trigger:PeakDetectHorizontal.peakDepth/></OutputArg>
                <OutputArg Name="PatchFDOMLatitude"><Trigger:PeakDetectHorizontal.peakLatitude/></OutputArg>
                <OutputArg Name="PatchFDOMLongitude"><Trigger:PeakDetectHorizontal.peakLongitude/></OutputArg>
                <OutputArg Name="PatchFDOMDistance"><Trigger:PeakDetectHorizontal.peakDistance/></OutputArg>
            </Trigger:PeakDetectHorizontal>

            <Syslog Severity="Important">Fell below OffPeakFraction. Patch value is <Arg Name="PatchFDOM"/><Units:part_per_billion/> at lat = <Arg Name="PatchFDOMLatitude"/><Units:degree/>, lon = <Arg Name="PatchFDOMLongitude"/><Units:degree/>, dep = <Arg Name="PatchFDOMDepth"/><Units:meter/>, distance = <Arg Name="PatchFDOMDistance"/><Units:meter/></Syslog>

            <SendData Service="Express"><Arg Name="PatchFDOM"/><Arg Name="PatchFDOMDepth"/><Arg Name="PatchFDOMLatitude"/><Arg Name="PatchFDOMLongitude"/>
            </SendData>

            <Assign Id="AssignPatchDetectOff"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

        </Aggregate>

        <Assign Id="AssignPatchDetectOn"><Sequence/><Arg Name="PatchDetectOn"/><True/></Assign>

        <Syslog Severity="Important">Next: bearing for CrossLeg: <Arg Name="WpBearing"/><Units:degree/>. WpMaxDistance = <Arg Name="WpMaxDistance"/><Units:meter/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>.</Syslog>

        <Aggregate Id="CrossLeg">

            <Description>
                This is a long leg across the width of the patch. Also the first
                leg in a mission run. Two waypoints run in parallel: a short run
                to the surfacing point, and a longer run to the edge of the
                patch.
            </Description>

            <Sequence/>

            <Break><Arg Name="WpDone"/>
                <Or><Arg Name="PatchDetectOn"/><Eq><False/></Eq></Or>
            </Break>

            <Guidance:Waypoint Id="CrossSurfaceWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="PatchFDOMDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Call RefId="SurfaceComms"/>

            <Guidance:Waypoint Id="CrossPeakWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="WpMaxDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Syslog Severity="Important">CrossPeakWp done. Lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchFDOM"/><Units:part_per_billion/> at lat = <Arg Name="PatchFDOMLatitude"/><Units:degree/>, lon = <Arg Name="PatchFDOMLongitude"/><Units:degree/>, dep = <Arg Name="PatchFDOMDepth"/><Units:meter/>, distance = <Arg Name="PatchFDOMDistance"/><Units:meter/></Syslog>

            <Assign Id="AssignPatchDetectOffInCrossLeg"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

            <Assign Id="AssignWpDoneInCrossLeg"><Sequence/><Arg Name="WpDone"/><True/></Assign>

        </Aggregate>

        <Assign Id="AssignWpBearingForInLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Add><Arg Name="Reverse"/></Add><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

        <Syslog Severity="Important">Next: bearing for InLeg: <Arg Name="WpBearing"/><Units:degree/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchFDOM"/><Units:part_per_billion/> at lat = <Arg Name="PatchFDOMLatitude"/><Units:degree/>, lon = <Arg Name="PatchFDOMLongitude"/><Units:degree/>, dep = <Arg Name="PatchFDOMDepth"/><Units:meter/>, distance = <Arg Name="PatchFDOMDistance"/><Units:meter/></Syslog>

        <Guidance:Waypoint Id="InLegWp">
            <Description>
                Simply drive back towards the patch center
            </Description>
            <Sequence/>
            <Timeout Duration="WpTimeout"/>
            <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="PatchFDOMDistance"/></Setting>
            <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
            <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
        </Guidance:Waypoint>

        <Assign Id="AssignWpBearingForOutLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Sub><Arg Name="Turn"/></Sub><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

        <Syslog Severity="Important">Next: bearing for OutLeg: <Arg Name="WpBearing"/><Units:degree/>. WpMaxDistance = <Arg Name="WpMaxDistance"/><Units:meter/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchFDOM"/><Units:part_per_billion/> at lat = <Arg Name="PatchFDOMLatitude"/><Units:degree/>, lon = <Arg Name="PatchFDOMLongitude"/><Units:degree/>, dep = <Arg Name="PatchFDOMDepth"/><Units:meter/>, distance = <Arg Name="PatchFDOMDistance"/><Units:meter/></Syslog>

        <Call RefId="SurfaceCommsSplit"/>

        <Assign Id="AssignPatchDetectOnForOutLeg"><Sequence/><Arg Name="PatchDetectOn"/><True/></Assign>

        <Aggregate Id="OutLeg">

            <Description>
                Drive outward until edge of patch is detected.
            </Description>

            <Sequence/>

            <Break><Arg Name="WpDone"/>
                <Or><Arg Name="PatchDetectOn"/><Eq><False/></Eq></Or>
            </Break>

            <Guidance:Waypoint Id="OutLegWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="WpMaxDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Assign Id="AssignPatchDetectOffInOutLeg"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

            <Assign Id="AssignWpDoneInOutLeg"><Sequence/><Arg Name="WpDone"/><True/></Assign>

        </Aggregate>

        <Assign Id="AssignWpBearingForCrossLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Add><Arg Name="Reverse"/></Add><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

    </Aggregate>

</Mission>


2018-09-26T19:10:50.079Z,1537989050.079 [CommandLine](IMPORTANT): Loaded ./Missions/Science/trackPatchFDOM.xml
2018-09-26T19:11:03.199Z,1537989063.199 [CommandLine](IMPORTANT): got command set trackPatchFDOM.MaxDepth 15.000000 meter
2018-09-26T19:11:03.200Z,1537989063.200 [CommandLine](IMPORTANT): got command set trackPatchFDOM.MinOffshore 1000.000000 meter
2018-09-26T19:11:03.201Z,1537989063.201 [CommandLine](IMPORTANT): got command set trackPatchFDOM.NeedCommsTime 20.000000 minute
2018-09-26T19:11:03.202Z,1537989063.202 [CommandLine](IMPORTANT): got command set trackPatchFDOM.MissionTimeout 3.000000 hour
2018-09-26T19:11:08.132Z,1537989068.132 [NAL9602](INFO): SBD MO Status=2, MOMSN=1727, MT Status=2, MTMSN=0
2018-09-26T19:11:08.132Z,1537989068.132 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-26T19:11:14.412Z,1537989074.412 [CommandLine](IMPORTANT): got command set trackPatchFDOM.YoYoMinDepth 0.300000 meter
2018-09-26T19:11:14.413Z,1537989074.413 [CommandLine](IMPORTANT): got command set trackPatchFDOM.YoYoMaxDepth 4.000000 meter
2018-09-26T19:11:14.414Z,1537989074.414 [CommandLine](IMPORTANT): got command set trackPatchFDOM.WpMaxDistance 200.000000 meter
2018-09-26T19:11:14.415Z,1537989074.415 [CommandLine](IMPORTANT): got command set trackPatchFDOM.WpTimeout 15.000000 minute
2018-09-26T19:11:14.415Z,1537989074.415 [CommandLine](IMPORTANT): got command run 
2018-09-26T19:11:14.419Z,1537989074.419 [CommandLine](IMPORTANT): Running 
2018-09-26T19:11:14.575Z,1537989074.575 [Default] Stopped
2018-09-26T19:11:14.575Z,1537989074.575 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-26T19:11:14.575Z,1537989074.575 [Default:B.GoToSurface] Stopped
2018-09-26T19:11:14.575Z,1537989074.575 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-26T19:11:14.575Z,1537989074.575 [Default:CheckIn] Stopped
2018-09-26T19:11:14.575Z,1537989074.575 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-26T19:11:14.575Z,1537989074.575 [Default:CheckIn:Read_GPS] Stopped
2018-09-26T19:11:14.575Z,1537989074.575 [MissionManager](IMPORTANT): Started mission trackPatchFDOM
2018-09-26T19:11:14.576Z,1537989074.576 [trackPatchFDOM] Running Loop=1
2018-09-26T19:11:14.576Z,1537989074.576 [trackPatchFDOM](DEBUG): Aggregate::initialize trackPatchFDOM
2018-09-26T19:11:14.576Z,1537989074.576 [trackPatchFDOM:A.AltitudeEnvelope] Running Loop=1
2018-09-26T19:11:14.576Z,1537989074.576 [trackPatchFDOM:A.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-26T19:11:14.576Z,1537989074.576 [trackPatchFDOM:B.DepthEnvelope] Running Loop=1
2018-09-26T19:11:14.581Z,1537989074.581 [trackPatchFDOM:B.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-26T19:11:14.581Z,1537989074.581 [trackPatchFDOM:F.OffshoreEnvelope] Running Loop=1
2018-09-26T19:11:14.581Z,1537989074.581 [trackPatchFDOM:F.OffshoreEnvelope](DEBUG): Initialize OffshoreEnvelopeComponent.
2018-09-26T19:11:14.581Z,1537989074.581 [trackPatchFDOM:G.WaterDepthEnvelope] Running Loop=1
2018-09-26T19:11:14.581Z,1537989074.581 [trackPatchFDOM:G.WaterDepthEnvelope](DEBUG): Initialize WaterDepthEnvelopeComponent.
2018-09-26T19:11:14.581Z,1537989074.581 [trackPatchFDOM:H.Pitch] Running Loop=1
2018-09-26T19:11:14.581Z,1537989074.581 [trackPatchFDOM:H.Pitch](DEBUG): Initialize.
2018-09-26T19:11:14.582Z,1537989074.582 [trackPatchFDOM:I.Buoyancy] Running Loop=1
2018-09-26T19:11:14.582Z,1537989074.582 [trackPatchFDOM:I.Buoyancy](DEBUG): Initialize Buoyancy Component.
2018-09-26T19:11:14.582Z,1537989074.582 [trackPatchFDOM:Science] Running Loop=1
2018-09-26T19:11:14.582Z,1537989074.582 [trackPatchFDOM:Science](DEBUG): Aggregate::initialize trackPatchFDOM:Science
2018-09-26T19:11:14.582Z,1537989074.582 [trackPatchFDOM:Science:A] Running Loop=1
2018-09-26T19:11:14.582Z,1537989074.582 [trackPatchFDOM:Science:B] Running Loop=1
2018-09-26T19:11:14.582Z,1537989074.582 [trackPatchFDOM:Science:C] Running Loop=1
2018-09-26T19:11:14.582Z,1537989074.582 [trackPatchFDOM:Science:D] Running Loop=1
2018-09-26T19:11:14.582Z,1537989074.582 [trackPatchFDOM:Science:E] Running Loop=1
2018-09-26T19:11:14.583Z,1537989074.583 [trackPatchFDOM:Science:F] Running Loop=1
2018-09-26T19:11:14.583Z,1537989074.583 [trackPatchFDOM:Science:G] Running Loop=1
2018-09-26T19:11:14.583Z,1537989074.583 [trackPatchFDOM:Science:Read_Oil] Running Loop=1
2018-09-26T19:11:14.583Z,1537989074.583 [trackPatchFDOM:Science:PeakDetectChl] Running Loop=1
2018-09-26T19:11:14.583Z,1537989074.583 [trackPatchFDOM:Science:PeakDetectChl](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectChl
2018-09-26T19:11:14.583Z,1537989074.583 [trackPatchFDOM:Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:11:14.583Z,1537989074.583 [trackPatchFDOM:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:11:14.586Z,1537989074.586 [trackPatchFDOM:Science:HighestChlPeakReport] Running Loop=1
2018-09-26T19:11:14.586Z,1537989074.586 [trackPatchFDOM:Science:HighestChlPeakReport](DEBUG): Aggregate::initialize trackPatchFDOM:Science:HighestChlPeakReport
2018-09-26T19:11:14.586Z,1537989074.586 [trackPatchFDOM:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2018-09-26T19:11:14.586Z,1537989074.586 [trackPatchFDOM:Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2018-09-26T19:11:14.586Z,1537989074.586 [trackPatchFDOM:Science:PeakDetectNO3] Running Loop=1
2018-09-26T19:11:14.587Z,1537989074.587 [trackPatchFDOM:Science:PeakDetectNO3](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectNO3
2018-09-26T19:11:14.587Z,1537989074.587 [trackPatchFDOM:Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:11:14.587Z,1537989074.587 [trackPatchFDOM:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:11:14.597Z,1537989074.597 [trackPatchFDOM:Science:PeakDetectOil] Running Loop=1
2018-09-26T19:11:14.597Z,1537989074.597 [trackPatchFDOM:Science:PeakDetectOil](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectOil
2018-09-26T19:11:14.597Z,1537989074.597 [trackPatchFDOM:Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:11:14.597Z,1537989074.597 [trackPatchFDOM:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:11:14.602Z,1537989074.602 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:11:14.602Z,1537989074.602 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:11:14.602Z,1537989074.602 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:11:14.602Z,1537989074.602 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:11:14.604Z,1537989074.604 [trackPatchFDOM:K.SetSpeed] Running Loop=1
2018-09-26T19:11:14.604Z,1537989074.604 [trackPatchFDOM:K.SetSpeed](DEBUG): Initialize.
2018-09-26T19:11:14.604Z,1537989074.604 [trackPatchFDOM:L.DepthEnvelope] Running Loop=1
2018-09-26T19:11:14.604Z,1537989074.604 [trackPatchFDOM:L.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-26T19:11:14.605Z,1537989074.605 [trackPatchFDOM:M.YoYo] Running Loop=1
2018-09-26T19:11:14.605Z,1537989074.605 [trackPatchFDOM:M.YoYo](DEBUG): Initialize YoYoComponent.
2018-09-26T19:11:14.605Z,1537989074.605 [trackPatchFDOM:SurfaceCommsSplit] Running Loop=1
2018-09-26T19:11:14.606Z,1537989074.606 [trackPatchFDOM:SurfaceCommsSplit](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceCommsSplit
2018-09-26T19:11:14.606Z,1537989074.606 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface] Running Loop=1
2018-09-26T19:11:14.606Z,1537989074.606 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-26T19:11:14.606Z,1537989074.606 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-26T19:11:14.607Z,1537989074.607 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-26T19:11:14.607Z,1537989074.607 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-26T19:11:14.607Z,1537989074.607 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-26T19:11:14.608Z,1537989074.608 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-26T19:11:14.613Z,1537989074.613 [trackPatchFDOM:M.YoYo] Running Loop=1
2018-09-26T19:11:14.626Z,1537989074.626 [trackPatchFDOM:L.DepthEnvelope] Running Loop=1
2018-09-26T19:11:14.631Z,1537989074.631 [trackPatchFDOM:K.SetSpeed] Running Loop=1
2018-09-26T19:11:14.640Z,1537989074.640 [trackPatchFDOM:Science] Running Loop=1
2018-09-26T19:11:14.669Z,1537989074.669 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:11:14.678Z,1537989074.678 [trackPatchFDOM:Science:PeakDetectOil] Stopped
2018-09-26T19:11:14.678Z,1537989074.678 [trackPatchFDOM:Science:PeakDetectOil](DEBUG): Aggregate::uninitialize trackPatchFDOM:Science:PeakDetectOil
2018-09-26T19:11:14.679Z,1537989074.679 [trackPatchFDOM:Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2018-09-26T19:11:14.679Z,1537989074.679 [trackPatchFDOM:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:11:14.679Z,1537989074.679 [trackPatchFDOM:Science:PeakDetectNO3] Stopped
2018-09-26T19:11:14.679Z,1537989074.679 [trackPatchFDOM:Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize trackPatchFDOM:Science:PeakDetectNO3
2018-09-26T19:11:14.679Z,1537989074.679 [trackPatchFDOM:Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2018-09-26T19:11:14.679Z,1537989074.679 [trackPatchFDOM:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:11:14.679Z,1537989074.679 [trackPatchFDOM:Science:HighestChlPeakReport] Stopped
2018-09-26T19:11:14.679Z,1537989074.679 [trackPatchFDOM:Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize trackPatchFDOM:Science:HighestChlPeakReport
2018-09-26T19:11:14.679Z,1537989074.679 [trackPatchFDOM:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2018-09-26T19:11:14.679Z,1537989074.679 [trackPatchFDOM:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-26T19:11:14.680Z,1537989074.680 [trackPatchFDOM:Science:PeakDetectChl] Stopped
2018-09-26T19:11:14.680Z,1537989074.680 [trackPatchFDOM:Science:PeakDetectChl](DEBUG): Aggregate::uninitialize trackPatchFDOM:Science:PeakDetectChl
2018-09-26T19:11:14.680Z,1537989074.680 [trackPatchFDOM:Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2018-09-26T19:11:14.680Z,1537989074.680 [trackPatchFDOM:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:11:14.680Z,1537989074.680 [trackPatchFDOM:Science:Read_Oil] Running Loop=1
2018-09-26T19:11:14.686Z,1537989074.686 [trackPatchFDOM:Science:Read_Oil](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-26T19:11:14.688Z,1537989074.688 [trackPatchFDOM:Science:G] Stopped
2018-09-26T19:11:14.688Z,1537989074.688 [trackPatchFDOM:Science:F] Stopped
2018-09-26T19:11:14.688Z,1537989074.688 [trackPatchFDOM:Science:E] Stopped
2018-09-26T19:11:14.688Z,1537989074.688 [trackPatchFDOM:Science:D] Stopped
2018-09-26T19:11:14.688Z,1537989074.688 [trackPatchFDOM:Science:C] Running Loop=1
2018-09-26T19:11:14.697Z,1537989074.697 [trackPatchFDOM:Science:C](DEBUG): Initialize ReadDataComponent to sense sea_water_temperature
2018-09-26T19:11:14.698Z,1537989074.698 [trackPatchFDOM:Science:C](DEBUG): Initialize ReadDataComponent to sense sea_water_salinity
2018-09-26T19:11:14.699Z,1537989074.699 [trackPatchFDOM:Science:B] Stopped
2018-09-26T19:11:14.699Z,1537989074.699 [trackPatchFDOM:Science:A] Running Loop=1
2018-09-26T19:11:14.700Z,1537989074.700 [trackPatchFDOM:Science:A](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_oxygen_in_sea_water
2018-09-26T19:11:14.706Z,1537989074.706 [trackPatchFDOM:I.Buoyancy] Running Loop=1
2018-09-26T19:11:14.715Z,1537989074.715 [trackPatchFDOM:H.Pitch] Running Loop=1
2018-09-26T19:11:14.724Z,1537989074.724 [trackPatchFDOM:G.WaterDepthEnvelope] Running Loop=1
2018-09-26T19:11:14.733Z,1537989074.733 [trackPatchFDOM:F.OffshoreEnvelope] Running Loop=1
2018-09-26T19:11:14.773Z,1537989074.773 [CTD_NeilBrown](DEBUG): Initializing CTD_NeilBrown.
2018-09-26T19:11:14.776Z,1537989074.776 [trackPatchFDOM:SurfaceCommsSplit:B] Running Loop=1
2018-09-26T19:11:14.776Z,1537989074.776 [trackPatchFDOM:SurfaceCommsSplit:B](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceCommsSplit:B
2018-09-26T19:11:14.776Z,1537989074.776 [trackPatchFDOM:SurfaceCommsSplit:B:A] Running Loop=1
2018-09-26T19:11:14.776Z,1537989074.776 [trackPatchFDOM:B.DepthEnvelope] Running Loop=1
2018-09-26T19:11:14.783Z,1537989074.783 [CTD_NeilBrown](INFO): Opening uart, block timeout 10ths=4
2018-09-26T19:11:14.793Z,1537989074.793 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-26T19:11:14.793Z,1537989074.793 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-26T19:11:14.798Z,1537989074.798 [trackPatchFDOM:A.AltitudeEnvelope] Running Loop=1
2018-09-26T19:11:14.921Z,1537989074.921 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:11:15.036Z,1537989075.036 [trackPatchFDOM:SurfaceCommsSplit:B:A](INFO): ##UnpackSplit##
2018-09-26T19:11:15.042Z,1537989075.042 [trackPatchFDOM:SurfaceCommsSplit:B:A] Stopped
2018-09-26T19:11:15.042Z,1537989075.042 [trackPatchFDOM:SurfaceCommsSplit:B](INFO): Completed trackPatchFDOM:SurfaceCommsSplit:B
2018-09-26T19:11:15.042Z,1537989075.042 [trackPatchFDOM:SurfaceCommsSplit:B] Stopped
2018-09-26T19:11:15.043Z,1537989075.043 [trackPatchFDOM:SurfaceCommsSplit:B](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceCommsSplit:B
2018-09-26T19:11:15.043Z,1537989075.043 [trackPatchFDOM:SurfaceCommsSplit:C] Running Loop=1
2018-09-26T19:11:15.043Z,1537989075.043 [trackPatchFDOM:SurfaceCommsSplit:C](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceCommsSplit:C
2018-09-26T19:11:15.043Z,1537989075.043 [trackPatchFDOM:SurfaceCommsSplit:C:A] Running Loop=1
2018-09-26T19:11:15.333Z,1537989075.333 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:11:15.368Z,1537989075.368 [trackPatchFDOM:M.YoYo] Preempted
2018-09-26T19:11:15.368Z,1537989075.368 [trackPatchFDOM:L.DepthEnvelope] Preempted
2018-09-26T19:11:15.368Z,1537989075.368 [trackPatchFDOM:K.SetSpeed] Preempted
2018-09-26T19:11:15.368Z,1537989075.368 [trackPatchFDOM:Science] Preempted
2018-09-26T19:11:15.368Z,1537989075.368 [trackPatchFDOM:Science:A] Preempted
2018-09-26T19:11:15.368Z,1537989075.368 [trackPatchFDOM:Science:C] Preempted
2018-09-26T19:11:15.368Z,1537989075.368 [trackPatchFDOM:Science:Read_Oil] Preempted
2018-09-26T19:11:15.368Z,1537989075.368 [trackPatchFDOM:Science:PeakDetectFDOM] Preempted
2018-09-26T19:11:15.368Z,1537989075.368 [trackPatchFDOM:I.Buoyancy] Preempted
2018-09-26T19:11:15.381Z,1537989075.381 [trackPatchFDOM:H.Pitch] Preempted
2018-09-26T19:11:15.381Z,1537989075.381 [trackPatchFDOM:G.WaterDepthEnvelope] Preempted
2018-09-26T19:11:15.381Z,1537989075.381 [trackPatchFDOM:F.OffshoreEnvelope] Preempted
2018-09-26T19:11:15.383Z,1537989075.383 [trackPatchFDOM:SurfaceCommsSplit:C:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-26T19:11:15.742Z,1537989075.742 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:11:17.033Z,1537989077.033 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-26T19:11:18.625Z,1537989078.625 [Aanderaa_O2](INFO): Powering down
2018-09-26T19:11:26.328Z,1537989086.328 [NAL9602](INFO): SBD MO Status=0, MOMSN=1727, MT Status=0, MTMSN=0
2018-09-26T19:11:26.328Z,1537989086.328 [NAL9602](INFO): No messages in MT queue
2018-09-26T19:11:58.609Z,1537989118.609 [DataOverHttps](IMPORTANT): SBD MTMSN=20180926T191158
2018-09-26T19:12:02.907Z,1537989122.907 [DataOverHttps](INFO): Received command:stop
2018-09-26T19:12:02.966Z,1537989122.966 [CommandLine](IMPORTANT): got command stop
2018-09-26T19:12:02.966Z,1537989122.966 [CommandLine](IMPORTANT): Scheduling is paused
2018-09-26T19:12:02.966Z,1537989122.966 [Supervisor](INFO): Stop Mission called by CommandLine::commandStop
2018-09-26T19:12:02.993Z,1537989122.993 [MissionManager](INFO): MissionManager is completed.
2018-09-26T19:12:02.994Z,1537989122.994 [MissionManager](INFO): Uninitializing Mission trackPatchFDOM
2018-09-26T19:12:02.994Z,1537989122.994 [trackPatchFDOM] Stopped
2018-09-26T19:12:02.994Z,1537989122.994 [trackPatchFDOM](DEBUG): Aggregate::uninitialize trackPatchFDOM
2018-09-26T19:12:02.994Z,1537989122.994 [trackPatchFDOM:A.AltitudeEnvelope] Stopped
2018-09-26T19:12:02.994Z,1537989122.994 [trackPatchFDOM:A.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-26T19:12:02.994Z,1537989122.994 [trackPatchFDOM:B.DepthEnvelope] Stopped
2018-09-26T19:12:02.994Z,1537989122.994 [trackPatchFDOM:B.DepthEnvelope](DEBUG): Uninitialize.
2018-09-26T19:12:02.994Z,1537989122.994 [trackPatchFDOM:SurfaceCommsSplit] Stopped
2018-09-26T19:12:02.994Z,1537989122.994 [trackPatchFDOM:SurfaceCommsSplit](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceCommsSplit
2018-09-26T19:12:02.995Z,1537989122.995 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface] Stopped
2018-09-26T19:12:02.995Z,1537989122.995 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-26T19:12:02.995Z,1537989122.995 [trackPatchFDOM:SurfaceCommsSplit:C] Stopped
2018-09-26T19:12:02.995Z,1537989122.995 [trackPatchFDOM:SurfaceCommsSplit:C](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceCommsSplit:C
2018-09-26T19:12:02.995Z,1537989122.995 [trackPatchFDOM:SurfaceCommsSplit:C:A] Stopped
2018-09-26T19:12:02.995Z,1537989122.995 [trackPatchFDOM:F.OffshoreEnvelope] Stopped
2018-09-26T19:12:02.995Z,1537989122.995 [trackPatchFDOM:F.OffshoreEnvelope](DEBUG): Uninitialize OffshoreEnvelopeComponent.
2018-09-26T19:12:02.995Z,1537989122.995 [trackPatchFDOM:G.WaterDepthEnvelope] Stopped
2018-09-26T19:12:02.995Z,1537989122.995 [trackPatchFDOM:G.WaterDepthEnvelope](DEBUG): Uninitialize WaterDepthEnvelopeComponent.
2018-09-26T19:12:02.995Z,1537989122.995 [trackPatchFDOM:H.Pitch] Stopped
2018-09-26T19:12:02.995Z,1537989122.995 [trackPatchFDOM:I.Buoyancy] Stopped
2018-09-26T19:12:02.996Z,1537989122.996 [trackPatchFDOM:I.Buoyancy](DEBUG): Uninitialize Buoyancy Component.
2018-09-26T19:12:02.996Z,1537989122.996 [trackPatchFDOM:Science] Stopped
2018-09-26T19:12:02.996Z,1537989122.996 [trackPatchFDOM:Science](DEBUG): Aggregate::uninitialize trackPatchFDOM:Science
2018-09-26T19:12:02.996Z,1537989122.996 [trackPatchFDOM:Science:A] Stopped
2018-09-26T19:12:02.996Z,1537989122.996 [trackPatchFDOM:Science:C] Stopped
2018-09-26T19:12:02.996Z,1537989122.996 [trackPatchFDOM:Science:Read_Oil] Stopped
2018-09-26T19:12:02.996Z,1537989122.996 [trackPatchFDOM:Science:PeakDetectFDOM] Stopped
2018-09-26T19:12:02.996Z,1537989122.996 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::uninitialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:12:02.996Z,1537989122.996 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:12:02.996Z,1537989122.996 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:12:02.996Z,1537989122.996 [trackPatchFDOM:K.SetSpeed] Stopped
2018-09-26T19:12:03.001Z,1537989123.001 [trackPatchFDOM:K.SetSpeed](DEBUG): Uninitialize.
2018-09-26T19:12:03.001Z,1537989123.001 [trackPatchFDOM:L.DepthEnvelope] Stopped
2018-09-26T19:12:03.001Z,1537989123.001 [trackPatchFDOM:L.DepthEnvelope](DEBUG): Uninitialize.
2018-09-26T19:12:03.001Z,1537989123.001 [trackPatchFDOM:M.YoYo] Stopped
2018-09-26T19:12:03.001Z,1537989123.001 [trackPatchFDOM:M.YoYo](DEBUG): Uninitialize YoYoComponent.
2018-09-26T19:12:03.333Z,1537989123.333 [MissionManager](IMPORTANT): Started mission Default
2018-09-26T19:12:03.333Z,1537989123.333 [Default] Running Loop=1
2018-09-26T19:12:03.333Z,1537989123.333 [Default](DEBUG): Aggregate::initialize Default
2018-09-26T19:12:03.333Z,1537989123.333 [Default:B.GoToSurface] Running Loop=1
2018-09-26T19:12:03.333Z,1537989123.333 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-26T19:12:03.334Z,1537989123.334 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-26T19:12:03.334Z,1537989123.334 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-26T19:12:03.334Z,1537989123.334 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-26T19:12:03.335Z,1537989123.335 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-26T19:12:03.335Z,1537989123.335 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-26T19:12:03.336Z,1537989123.336 [Default:A.Wait] Running Loop=1
2018-09-26T19:12:03.336Z,1537989123.336 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-26T19:12:16.518Z,1537989136.518 [Default:A.Wait](INFO): Done Waiting.
2018-09-26T19:12:16.518Z,1537989136.518 [Default:A.Wait] Stopped
2018-09-26T19:12:16.518Z,1537989136.518 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-26T19:12:16.946Z,1537989136.946 [Default:CheckIn] Running Loop=1
2018-09-26T19:12:16.946Z,1537989136.946 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-26T19:12:16.946Z,1537989136.946 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-26T19:16:11.226Z,1537989371.226 [RDI_Pathfinder](ERROR): Failed to parse:
:HM,G,D,0e8c,0ffe,*15.383,*-0.050,*0.000
2018-09-26T19:16:24.814Z,1537989384.814 [NAL9602](INFO): GPS fix at 20180926T191625: (36.812462, -121.822382)
2018-09-26T19:16:24.869Z,1537989384.869 [Default:CheckIn:Read_GPS] Stopped
2018-09-26T19:16:24.869Z,1537989384.869 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-26T19:16:29.511Z,1537989389.511 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180926T174441/Courier0040.lzma
2018-09-26T19:16:30.294Z,1537989390.294 [DataOverHttps](INFO): Moved sent file to Logs/20180926T174441/Courier0040.lzma.bak
2018-09-26T19:16:30.294Z,1537989390.294 [DataOverHttps](INFO): SBD MOMSN=8601273
2018-09-26T19:16:40.161Z,1537989400.161 [DataOverHttps](INFO): Sending 212 bytes from file Logs/20180926T190706/Courier0000.lzma
2018-09-26T19:16:40.959Z,1537989400.959 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Courier0000.lzma.bak
2018-09-26T19:16:40.959Z,1537989400.959 [DataOverHttps](INFO): SBD MOMSN=8601275
2018-09-26T19:16:50.218Z,1537989410.218 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180926T190706/Courier0003.lzma
2018-09-26T19:16:50.994Z,1537989410.994 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Courier0003.lzma.bak
2018-09-26T19:16:50.994Z,1537989410.994 [DataOverHttps](INFO): SBD MOMSN=8601279
2018-09-26T19:17:00.097Z,1537989420.097 [NAL9602](INFO): Powering down
2018-09-26T19:17:00.268Z,1537989420.268 [DataOverHttps](INFO): Sending 95 bytes from file Logs/20180926T174441/Express0041.lzma
2018-09-26T19:17:01.034Z,1537989421.034 [DataOverHttps](INFO): Moved sent file to Logs/20180926T174441/Express0041.lzma.bak
2018-09-26T19:17:01.034Z,1537989421.034 [DataOverHttps](INFO): SBD MOMSN=8601281
2018-09-26T19:17:10.228Z,1537989430.228 [DataOverHttps](INFO): Sending 967 bytes from file Logs/20180926T190706/Express0001.lzma
2018-09-26T19:17:11.002Z,1537989431.002 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Express0001.lzma.bak
2018-09-26T19:17:11.002Z,1537989431.002 [DataOverHttps](INFO): SBD MOMSN=8601284
2018-09-26T19:17:20.310Z,1537989440.310 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180926T190706/Express0004.lzma
2018-09-26T19:17:21.090Z,1537989441.090 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Express0004.lzma.bak
2018-09-26T19:17:21.091Z,1537989441.091 [DataOverHttps](INFO): SBD MOMSN=8601313
2018-09-26T19:17:21.830Z,1537989441.830 [Default:CheckIn:Read_Iridium] Stopped
2018-09-26T19:17:21.830Z,1537989441.830 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-26T19:17:21.831Z,1537989441.831 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-26T19:19:06.305Z,1537989546.305 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-26T19:19:06.306Z,1537989546.306 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092612245322,35.0, -.0,1448.9,  0
2018-09-26T19:21:33.151Z,1537989693.151 [DataOverHttps](IMPORTANT): SBD MTMSN=20180926T192133
2018-09-26T19:21:37.505Z,1537989697.505 [DataOverHttps](INFO): Received command:sched asap "load Science/trackPatchFDOM.xml;set trackPatchFDOM.MaxDepth 15 meter;set trackPatchFDOM.MinOffshore 1000 meter;set trackPatchFDOM.NeedCommsTime 20 minute;set trackPatchFDOM.MissionTimeout 3 hour" 1hrc 1 2
2018-09-26T19:21:37.578Z,1537989697.578 [CommandLine](IMPORTANT): got command schedule asap "load Science/trackPatchFDOM.xml;set trackPatchFDOM.MaxDepth 15 meter;set trackPatchFDOM.MinOffshore 1000 meter;set trackPatchFDOM.NeedCommsTime 20 minute;set trackPatchFDOM.MissionTimeout 3 hour" 1hrc 1 2.000000
2018-09-26T19:21:37.579Z,1537989697.579 [CommandLine](IMPORTANT): Scheduling command #1 of 2 with id=1hrc
2018-09-26T19:21:37.579Z,1537989697.579 [CommandLine](IMPORTANT): Scheduled #3 (#1 of 2 with id='1hrc'): "load Science/trackPatchFDOM.xml;set trackPatchFDOM.MaxDepth 15 meter;set trackPatchFDOM.MinOffshore 1000 meter;set trackPatchFDOM.NeedCommsTime 20 minute;set trackPatchFDOM.MissionTimeout 3 hour" ASAP
2018-09-26T19:21:38.284Z,1537989698.284 [DataOverHttps](IMPORTANT): SBD MTMSN=20180926T192138
2018-09-26T19:21:42.525Z,1537989702.525 [DataOverHttps](INFO): Received command:sched asap "set trackPatchFDOM.YoYoMinDepth .3 meter;set trackPatchFDOM.YoYoMaxDepth 4 meter;set trackPatchFDOM.WpMaxDistance 200 meter;set trackPatchFDOM.WpTimeout 15 minute;run " 1hrc 2 2
2018-09-26T19:21:42.590Z,1537989702.590 [CommandLine](IMPORTANT): got command schedule asap "set trackPatchFDOM.YoYoMinDepth .3 meter;set trackPatchFDOM.YoYoMaxDepth 4 meter;set trackPatchFDOM.WpMaxDistance 200 meter;set trackPatchFDOM.WpTimeout 15 minute;run " 1hrc 2 2.000000
2018-09-26T19:21:42.590Z,1537989702.590 [CommandLine](IMPORTANT): Scheduling command #2 of 2 with id=1hrc
2018-09-26T19:21:42.591Z,1537989702.591 [CommandLine](IMPORTANT): Scheduled #4 (#2 of 2 with id='1hrc'): "set trackPatchFDOM.YoYoMinDepth .3 meter;set trackPatchFDOM.YoYoMaxDepth 4 meter;set trackPatchFDOM.WpMaxDistance 200 meter;set trackPatchFDOM.WpTimeout 15 minute;run " ASAP
2018-09-26T19:21:42.778Z,1537989702.778 [CommandLine](IMPORTANT): got command load ./Missions/Science/trackPatchFDOM.xml
2018-09-26T19:21:42.779Z,1537989702.779 [MissionManager](INFO): Loading Mission: ./Missions/Science/trackPatchFDOM.xml
2018-09-26T19:21:43.144Z,1537989703.144 [MissionManager](INFO): DefineArg trackPatchFDOM.MinAltitude = 5.000000 m
2018-09-26T19:21:43.146Z,1537989703.146 [MissionManager](INFO): DefineArg trackPatchFDOM.MaxDepth = 65.000000 m
2018-09-26T19:21:43.148Z,1537989703.148 [MissionManager](INFO): DefineArg trackPatchFDOM.MinWaterDepth = 10.000000 m
2018-09-26T19:21:43.151Z,1537989703.151 [MissionManager](INFO): DefineArg trackPatchFDOM.MinOffshore = 2000.000000 m
2018-09-26T19:21:43.153Z,1537989703.153 [MissionManager](INFO): DefineArg trackPatchFDOM.NeedCommsTime = 180.000000 min
2018-09-26T19:21:43.155Z,1537989703.155 [MissionManager](INFO): DefineArg trackPatchFDOM.MissionTimeout = 56.000000 h
2018-09-26T19:21:43.159Z,1537989703.159 [MissionManager](INFO): DefineArg trackPatchFDOM.MassDefault = 0.200000 cm
2018-09-26T19:21:43.161Z,1537989703.161 [MissionManager](INFO): DefineArg trackPatchFDOM.BuoyancyNeutral = 274.999999 cc
2018-09-26T19:21:43.163Z,1537989703.163 [MissionManager](INFO): DefineArg trackPatchFDOM.YoYoMinDepth = 5.000000 m
2018-09-26T19:21:43.196Z,1537989703.196 [MissionManager](INFO): DefineArg trackPatchFDOM.YoYoMaxDepth = 25.000000 m
2018-09-26T19:21:43.198Z,1537989703.198 [MissionManager](INFO): DefineArg trackPatchFDOM.YoYoUpPitch = 20.000000 arcdeg
2018-09-26T19:21:43.200Z,1537989703.200 [MissionManager](INFO): DefineArg trackPatchFDOM.YoYoDownPitch = -20.000000 arcdeg
2018-09-26T19:21:43.203Z,1537989703.203 [MissionManager](INFO): DefineArg trackPatchFDOM.Speed = 1.000000 m/s
2018-09-26T19:21:43.226Z,1537989703.226 [MissionManager](INFO): DefineArg trackPatchFDOM.WpMaxDistance = 1000.000000 m
2018-09-26T19:21:43.229Z,1537989703.229 [MissionManager](INFO): DefineArg trackPatchFDOM.WpTimeout = 8000.000000 s
2018-09-26T19:21:43.231Z,1537989703.231 [MissionManager](INFO): DefineArg trackPatchFDOM.WaterFrame = 1 bool
2018-09-26T19:21:43.233Z,1537989703.233 [MissionManager](INFO): DefineArg trackPatchFDOM.Repeat = 20.000000 count
2018-09-26T19:21:43.235Z,1537989703.235 [MissionManager](INFO): DefineArg trackPatchFDOM.Turn = 144.000000 arcdeg
2018-09-26T19:21:43.254Z,1537989703.254 [MissionManager](INFO): DefineArg trackPatchFDOM.Reverse = 180.000000 arcdeg
2018-09-26T19:21:43.256Z,1537989703.256 [MissionManager](INFO): DefineArg trackPatchFDOM.TwoPi = 360.000000 arcdeg
2018-09-26T19:21:43.258Z,1537989703.258 [MissionManager](INFO): DefineArg trackPatchFDOM.TimeWindowPeakRpt = nan min
2018-09-26T19:21:43.261Z,1537989703.261 [MissionManager](INFO): DefineArg trackPatchFDOM.LowPassWindowLen = 20.000000 count
2018-09-26T19:21:43.263Z,1537989703.263 [MissionManager](INFO): DefineArg trackPatchFDOM.PeakShallowBnd = 2.000000 m
2018-09-26T19:21:43.287Z,1537989703.287 [MissionManager](INFO): DefineArg trackPatchFDOM.PeakDeepBnd = 4.000000 m
2018-09-26T19:21:43.324Z,1537989703.324 [MissionManager](INFO): DefineArg trackPatchFDOM.FilterWidth = 4.000000 count
2018-09-26T19:21:43.348Z,1537989703.348 [MissionManager](INFO): DefineArg trackPatchFDOM.BeginThreshold = nan ug/l
2018-09-26T19:21:43.350Z,1537989703.350 [MissionManager](INFO): DefineArg trackPatchFDOM.OffPeakFraction = 80.000000 %
2018-09-26T19:21:43.352Z,1537989703.352 [MissionManager](INFO): DefineArg trackPatchFDOM.PatchMode = 0 bool
2018-09-26T19:21:43.372Z,1537989703.372 [MissionManager](INFO): DefineArg trackPatchFDOM.PatchTrackingHorizontal = 1 bool
2018-09-26T19:21:43.374Z,1537989703.374 [MissionManager](INFO): DefineArg trackPatchFDOM.WpBearing = -90.000000 arcdeg
2018-09-26T19:21:43.376Z,1537989703.376 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchDetectOn = 0 bool
2018-09-26T19:21:43.393Z,1537989703.393 [MissionManager](INFO): DefineOutput trackPatchFDOM.WpDone = 0 bool
2018-09-26T19:21:43.396Z,1537989703.396 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchFDOM = nan ug/l
2018-09-26T19:21:43.416Z,1537989703.416 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchFDOMDepth = nan m
2018-09-26T19:21:43.419Z,1537989703.419 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchFDOMLatitude = nan arcdeg
2018-09-26T19:21:43.421Z,1537989703.421 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchFDOMLongitude = nan arcdeg
2018-09-26T19:21:43.424Z,1537989703.424 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchFDOMDistance = 0.000000 m
2018-09-26T19:21:43.445Z,1537989703.445 [trackPatchFDOM:A.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-26T19:21:43.450Z,1537989703.450 [trackPatchFDOM:B.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-26T19:21:43.455Z,1537989703.455 [MissionManager](INFO): Inserting Stack: Missions/Insert/Surface.xml
2018-09-26T19:21:43.496Z,1537989703.496 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceCommsSplit.SurfaceDepthRate = nan m/s
2018-09-26T19:21:43.498Z,1537989703.498 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceCommsSplit.SurfacePitch = 20.000000 arcdeg
2018-09-26T19:21:43.518Z,1537989703.518 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceCommsSplit.SurfaceSpeed = 1.000000 m/s
2018-09-26T19:21:43.521Z,1537989703.521 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceCommsSplit.IridiumTimeout = 30.000000 min
2018-09-26T19:21:43.523Z,1537989703.523 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceCommsSplit.UnpackSplitAtSurface = 0 bool
2018-09-26T19:21:43.524Z,1537989703.524 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-26T19:21:43.552Z,1537989703.552 [MissionManager](INFO): RedefineArg trackPatchFDOM:SurfaceCommsSplit.SurfacePitch = value:20.000000 arcdeg
2018-09-26T19:21:43.554Z,1537989703.554 [MissionManager](INFO): RedefineArg trackPatchFDOM:SurfaceCommsSplit.SurfaceSpeed = value:1.000000 m/s
2018-09-26T19:21:43.555Z,1537989703.555 [MissionManager](INFO): RedefineArg trackPatchFDOM:SurfaceCommsSplit.UnpackSplitAtSurface = value:1 bool
2018-09-26T19:21:43.556Z,1537989703.556 [MissionManager](INFO): Inserting Stack: Missions/Insert/Surface.xml
2018-09-26T19:21:43.605Z,1537989703.605 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.SurfaceDepthRate = nan m/s
2018-09-26T19:21:43.607Z,1537989703.607 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.SurfacePitch = 20.000000 arcdeg
2018-09-26T19:21:43.621Z,1537989703.621 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.SurfaceSpeed = 1.000000 m/s
2018-09-26T19:21:43.623Z,1537989703.623 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.IridiumTimeout = 30.000000 min
2018-09-26T19:21:43.625Z,1537989703.625 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.UnpackSplitAtSurface = 0 bool
2018-09-26T19:21:43.626Z,1537989703.626 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-26T19:21:43.660Z,1537989703.660 [MissionManager](INFO): RedefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.SurfacePitch = value:20.000000 arcdeg
2018-09-26T19:21:43.662Z,1537989703.662 [MissionManager](INFO): RedefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.SurfaceSpeed = value:1.000000 m/s
2018-09-26T19:21:43.685Z,1537989703.685 [trackPatchFDOM:F.OffshoreEnvelope](DEBUG): Construct OffshoreEnvelope.
2018-09-26T19:21:43.741Z,1537989703.741 [trackPatchFDOM:G.WaterDepthEnvelope](DEBUG): Construct WaterDepthEnvelope.
2018-09-26T19:21:43.754Z,1537989703.754 [trackPatchFDOM:H.Pitch](DEBUG): Construct.
2018-09-26T19:21:43.766Z,1537989703.766 [trackPatchFDOM:I.Buoyancy](DEBUG): Construct Buoyancy.
2018-09-26T19:21:43.768Z,1537989703.768 [MissionManager](INFO): Inserting Stack: Missions/Insert/Science.xml
2018-09-26T19:21:44.166Z,1537989704.166 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.SampleISUS = 0 bool
2018-09-26T19:21:44.168Z,1537989704.168 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.SampleISUSmaxPitch = 60.000000 arcdeg
2018-09-26T19:21:44.183Z,1537989704.183 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.SampleISUSminPitch = -60.000000 arcdeg
2018-09-26T19:21:44.197Z,1537989704.197 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakDetectChlActive = 0 bool
2018-09-26T19:21:44.199Z,1537989704.199 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.TimeWindowPeakReport = nan min
2018-09-26T19:21:44.217Z,1537989704.217 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.HighestChlPeakReportActive = 0 bool
2018-09-26T19:21:44.219Z,1537989704.219 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PatchTracking = 0 bool
2018-09-26T19:21:44.226Z,1537989704.226 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.FilterWidthHorizontal = 3.000000 count
2018-09-26T19:21:44.228Z,1537989704.228 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.NumProfilesSlidingwindow = 100.000000 count
2018-09-26T19:21:44.235Z,1537989704.235 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.OffPeakFractionHorizontal = 80.000000 %
2018-09-26T19:21:44.241Z,1537989704.241 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakDetectNO3Active = 0 bool
2018-09-26T19:21:44.246Z,1537989704.246 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakDetectOilActive = 0 bool
2018-09-26T19:21:44.248Z,1537989704.248 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakDetectFDOMActive = 0 bool
2018-09-26T19:21:44.250Z,1537989704.250 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.UpwardDerivativeOfTemperatureActive = 0 bool
2018-09-26T19:21:44.269Z,1537989704.269 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledAanderaaO2 = 1.000000 bool
2018-09-26T19:21:44.271Z,1537989704.271 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledNeilBrown = 1.000000 bool
2018-09-26T19:21:44.274Z,1537989704.274 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledSeabird = 0.000000 bool
2018-09-26T19:21:44.276Z,1537989704.276 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledTurbulence_NPS = 0.000000 bool
2018-09-26T19:21:44.279Z,1537989704.279 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledWetLabsBB2FL = 0.000000 bool
2018-09-26T19:21:44.284Z,1537989704.284 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledWetLabsSeaOWL_UV_A = 1.000000 bool
2018-09-26T19:21:44.286Z,1537989704.286 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledISUS = 0.000000 bool
2018-09-26T19:21:44.288Z,1537989704.288 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.LowPassWindowLength = 20.000000 count
2018-09-26T19:21:44.291Z,1537989704.291 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakChlShallowBound = nan m
2018-09-26T19:21:44.309Z,1537989704.309 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakChlDeepBound = nan m
2018-09-26T19:21:44.311Z,1537989704.311 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakShallowBound = nan m
2018-09-26T19:21:44.313Z,1537989704.313 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakDeepBound = nan m
2018-09-26T19:21:44.316Z,1537989704.316 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakChl = 0.000000 ug/l
2018-09-26T19:21:44.318Z,1537989704.318 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakChlDepth = 0.000000 m
2018-09-26T19:21:44.320Z,1537989704.320 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakChlTemperature = 0.000000 degC
2018-09-26T19:21:44.340Z,1537989704.340 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakChlLatitude = nan arcdeg
2018-09-26T19:21:44.342Z,1537989704.342 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakChlLongitude = nan arcdeg
2018-09-26T19:21:44.344Z,1537989704.344 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakNO3 = 0.000000 umol/l
2018-09-26T19:21:44.347Z,1537989704.347 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakNO3Depth = 0.000000 m
2018-09-26T19:21:44.360Z,1537989704.360 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakNO3Latitude = nan arcdeg
2018-09-26T19:21:44.362Z,1537989704.362 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakNO3Longitude = nan arcdeg
2018-09-26T19:21:44.364Z,1537989704.364 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchChl = 0.000000 m
2018-09-26T19:21:44.367Z,1537989704.367 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchChlDepth = 0.000000 m
2018-09-26T19:21:44.386Z,1537989704.386 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchChlLatitude = nan arcdeg
2018-09-26T19:21:44.389Z,1537989704.389 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchChlLongitude = nan arcdeg
2018-09-26T19:21:44.395Z,1537989704.395 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchChlDistance = nan m
2018-09-26T19:21:44.413Z,1537989704.413 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakOil = 0.000000 kg/m3
2018-09-26T19:21:44.416Z,1537989704.416 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakOilDepth = 0.000000 m
2018-09-26T19:21:44.418Z,1537989704.418 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakOilLatitude = nan arcdeg
2018-09-26T19:21:44.420Z,1537989704.420 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakOilLongitude = nan arcdeg
2018-09-26T19:21:44.438Z,1537989704.438 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakFDOM = 0.000000 ppb
2018-09-26T19:21:44.441Z,1537989704.441 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakFDOMDepth = 0.000000 m
2018-09-26T19:21:44.443Z,1537989704.443 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakFDOMLatitude = nan arcdeg
2018-09-26T19:21:44.458Z,1537989704.458 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakFDOMLongitude = nan arcdeg
2018-09-26T19:21:44.460Z,1537989704.460 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchFDOMDistance = nan m
2018-09-26T19:21:44.547Z,1537989704.547 [trackPatchFDOM:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-26T19:21:44.575Z,1537989704.575 [trackPatchFDOM:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-26T19:21:44.626Z,1537989704.626 [trackPatchFDOM:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-26T19:21:44.650Z,1537989704.650 [trackPatchFDOM:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-26T19:21:44.677Z,1537989704.677 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-26T19:21:44.702Z,1537989704.702 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.PeakDetectFDOMActive = value:1 bool
2018-09-26T19:21:44.703Z,1537989704.703 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.TimeWindowPeakReport = reader:trackPatchFDOM.TimeWindowPeakRpt
2018-09-26T19:21:44.705Z,1537989704.705 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.PatchTracking = value:1 bool
2018-09-26T19:21:44.706Z,1537989704.706 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.LowPassWindowLength = reader:trackPatchFDOM.LowPassWindowLen
2018-09-26T19:21:44.708Z,1537989704.708 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.PeakShallowBound = reader:trackPatchFDOM.PeakShallowBnd
2018-09-26T19:21:44.725Z,1537989704.725 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.PeakDeepBound = reader:trackPatchFDOM.PeakDeepBnd
2018-09-26T19:21:44.727Z,1537989704.727 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.OffPeakFractionHorizontal = reader:trackPatchFDOM.OffPeakFraction
2018-09-26T19:21:44.727Z,1537989704.727 [trackPatchFDOM:K.SetSpeed](DEBUG): Construct.
2018-09-26T19:21:44.730Z,1537989704.730 [trackPatchFDOM:L.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-26T19:21:44.754Z,1537989704.754 [trackPatchFDOM:M.YoYo](DEBUG): Construct YoYo.
2018-09-26T19:21:44.774Z,1537989704.774 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-26T19:21:44.808Z,1537989704.808 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-26T19:21:44.831Z,1537989704.831 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-26T19:21:44.859Z,1537989704.859 [trackPatchFDOM:PatchDetectHorizontal:InLegWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-26T19:21:44.955Z,1537989704.955 [trackPatchFDOM:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-26T19:21:45.098Z,1537989705.098 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Trigger="Tethys/Trigger" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Trigger http://okeanids.mbari.org/tethys/Xml/Trigger.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="trackPatchFDOM">

    <Description>
        Vehicle runs yo-yos, with patch detect enabled for FDOM
        concentration_of_colored_dissolved_organic_matter_in_sea_water_expressed_as_equivalent_mass_fraction_of_quinine_sulfate_dihydrate
        concentration.
    </Description>

<!-- Vehicle safety parameters -->

    <DefineArg Name="MinAltitude"><Description>
        Minimum altitude for the entire mission.
    </Description><Units:meter/><Value>5</Value></DefineArg>

    <DefineArg Name="MaxDepth"><Description>
        Maximum depth for the entire mission.
    </Description><Units:meter/><Value>65</Value></DefineArg>

    <DefineArg Name="MinWaterDepth"><Description>
        Minimum water depth for the entire mission.
    </Description><Units:meter/><Value>10</Value></DefineArg>

    <DefineArg Name="MinOffshore"><Description>
        Minimum offshore distance for the entire mission.
    </Description><Units:meter/><Value>2000</Value></DefineArg>

    <DefineArg Name="NeedCommsTime"><Description>
        Maximum time between surfacings for communications
    </Description><Units:minute/><Value>180</Value></DefineArg>

    <DefineArg Name="MissionTimeout"><Description>
        Timeout for the entire mission
    </Description><Units:hour/><Value>56</Value></DefineArg>

    <DefineArg Name="MassDefault"><Description>
        Static setting for mass during the mission. Defaults to massDefault
        setting in the Config/Control.cfg file.
    </Description><Control:VerticalControl.massDefault/></DefineArg>

    <DefineArg Name="BuoyancyNeutral"><Description>
        Buoyancy bladder position while performing the YoYo behavior. Defaults
        to buoyancyNeutral setting in the Config/Control.cfg file.
    </Description><Control:VerticalControl.buoyancyNeutral/></DefineArg>

<!-- Basic guidance settings -->

    <DefineArg Name="YoYoMinDepth"><Description>
        Minimum depth during yo-yo's.
    </Description><Units:meter/><Value>5.0</Value></DefineArg>

    <DefineArg Name="YoYoMaxDepth"><Description>
        Maximum depth during yo-yo's.
    </Description><Units:meter/><Value>25.0</Value></DefineArg>

    <DefineArg Name="YoYoUpPitch"><Description>
        Pitch when yo-yo's are ascending.
    </Description><Units:degree/><Value>20.0</Value></DefineArg>

    <DefineArg Name="YoYoDownPitch"><Description>
        Pitch when yo-yo's are descending.
    </Description><Units:degree/><Value>-20.0</Value></DefineArg>

    <DefineArg Name="Speed"><Description>
        Vehicle speed.
    </Description><Units:meter_per_second/><Value>1</Value></DefineArg>

    <DefineArg Name="WpMaxDistance"><Description>
        Maximum length of each tracking leg
<!--debug
    </Description><Units:meter/><Value>7500</Value></DefineArg>
-->
    </Description><Units:meter/><Value>1000</Value></DefineArg>

    <DefineArg Name="WpTimeout"><Description>
        Maximum duration of each tracking leg
    </Description><Units:second/><Value>8000</Value></DefineArg>

    <DefineArg Name="WaterFrame"><Description>
        Set WaterFrame true to drive towards waypoints in the water frame of
        reference
    </Description><True/></DefineArg>

    <DefineArg Name="Repeat"><Description>
        Maximum number of tracking legs
    </Description><Units:count/><Value>20</Value></DefineArg>

<!-- Constant settings for each tracking leg -->

    <DefineArg Name="Turn"><Description>
        Amount to turn at each leg
    </Description><Units:degree/><Value>144</Value></DefineArg>

    <DefineArg Name="Reverse"><Description>
        Change in bearing which reverses vehicle direction
    </Description><Units:degree/><Value>180</Value></DefineArg>

    <DefineArg Name="TwoPi"><Description>
        Applied to stop run-up of angles
    </Description><Units:degree/><Value>360</Value></DefineArg>

    <DefineArg Name="TimeWindowPeakRpt"><Description>
        If greater than zero, report a peak every window. If NaN or zero, this
        variable is ignored.
    </Description><Units:minute/><Value>NaN</Value></DefineArg>

<!--debug
    </Description><Units:minute/><Value>1</Value></DefineArg>
-->

    <DefineArg Name="LowPassWindowLen"><Description>
        Low-pass window length (based on depth sensor sampling interval 0.4
        second) for low-pass filtering.
    </Description><Units:count/><Value>20</Value></DefineArg>

    <DefineArg Name="PeakShallowBnd"><Description>
        Shallow depth bound for detecting peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>2</Value></DefineArg>

    <DefineArg Name="PeakDeepBnd"><Description>
        Deep depth bound for detecting peak on each descent or ascent profile.
    </Description><Units:meter/><Value>4</Value></DefineArg>

    <DefineArg Name="FilterWidth"><Description>
        Width of boxcar filter used in horizontal patch detection
    </Description><Units:count/><Value>4</Value></DefineArg>

    <DefineArg Name="BeginThreshold"><Description>
        If non-NaN, sets threshold for starting horizontal patch detection
    </Description><Units:microgram_per_liter/><Value>NaN</Value></DefineArg>

    <DefineArg Name="OffPeakFraction"><Description>
        When filtered horizontal value is this fraction of the peak, consider it
        outside the patch.
    </Description><Units:percent/><Value>80</Value></DefineArg>

    <DefineArg Name="PatchMode"><Description>
        If true, use center of "in peak" range as the turn-around point. If
        false use maximum horizontal peak location as the turn-around point.
    </Description><False/></DefineArg>

    <DefineArg Name="PatchTrackingHorizontal"><Description>
        Set true to turn on horizontal patch tracking
    </Description><True/></DefineArg>

<!-- Variable Settings for each tracking leg -->

    <DefineArg Name="WpBearing"><Description>
        Bearing being followed in the current leg. Set this to initialize start
        direction of patch tracking.
    </Description><Units:degree/><Value>-90</Value></DefineArg>

    <DefineOutput Name="PatchDetectOn"><Description>
        Mission sets this to true when the patch has been crossed.
    </Description><False/></DefineOutput>

    <DefineOutput Name="WpDone"><Description>
        Mission sets this to true when the cross-patch waypoint has been
        reached.
    </Description><False/></DefineOutput>

    <DefineOutput Name="PatchFDOM"><Units:microgram_per_liter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchFDOMDepth"><Units:meter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchFDOMLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchFDOMLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchFDOMDistance"><Units:meter/><Value>0</Value></DefineOutput>

<!-- The timeout -->

    <Timeout Duration="MissionTimeout"/>

<!-- And now the mission -->

    <Guidance:AltitudeEnvelope>
        <Parallel/>
        <Setting><Guidance:AltitudeEnvelope.minAltitude/><Arg Name="MinAltitude"/></Setting>
    </Guidance:AltitudeEnvelope>

    <Guidance:DepthEnvelope>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="MaxDepth"/></Setting>
    </Guidance:DepthEnvelope>

    <Insert Filename="Insert/Surface.xml" Id="SurfaceCommsSplit">
        <RedefineArg Name="SurfacePitch"><Units:degree/><Value>20</Value></RedefineArg>
        <RedefineArg Name="SurfaceSpeed"><Units:meter_per_second/><Value>1</Value></RedefineArg>
        <RedefineArg Name="UnpackSplitAtSurface"><True/></RedefineArg>
    </Insert>

    <Aggregate Id="SurfaceComms">

        <When>
            <Called/>
        </When>

        <Insert Filename="Insert/Surface.xml">
            <RedefineArg Name="SurfacePitch"><Units:degree/><Value>20</Value></RedefineArg>
            <RedefineArg Name="SurfaceSpeed"><Units:meter_per_second/><Value>1</Value></RedefineArg>
        </Insert>

    </Aggregate>

<!-- GPS Update.  Don't go too long w/o a GPS fix. -->

    <Aggregate Id="NeedComms">

        <When>
            <Universal:platform_pitch_angle/>
            <Gt><Units:degree/><Value>0</Value></Gt>
            <And><Elapsed><Universal:time_fix/></Elapsed><Gt><Arg Name="NeedCommsTime"/></Gt></And>
            <Or><Elapsed><Universal:time_fix/></Elapsed><Gt><Arg Name="NeedCommsTime"/><Add><Units:minute/><Value>10</Value></Add></Gt></Or>
        </When>

        <Syslog Severity="Important">NeedComms Timeout Surfacing</Syslog>

        <Call RefId="SurfaceComms"/>

    </Aggregate>

    <Guidance:OffshoreEnvelope>
        <Parallel/>
        <Setting><Guidance:OffshoreEnvelope.minOffshore/><Arg Name="MinOffshore"/></Setting>
    </Guidance:OffshoreEnvelope>

    <Guidance:WaterDepthEnvelope>
        <Parallel/>
        <Setting><Guidance:WaterDepthEnvelope.minWaterDepth/><Arg Name="MinWaterDepth"/></Setting>
    </Guidance:WaterDepthEnvelope>

    <Guidance:Pitch>
        <Parallel/>
        <Setting><Guidance:Pitch.massPosition/><Arg Name="MassDefault"/></Setting>
    </Guidance:Pitch>

    <Guidance:Buoyancy>
        <Parallel/>
        <Setting><Guidance:Buoyancy.position /><Arg Name="BuoyancyNeutral"/></Setting>
    </Guidance:Buoyancy>

<!-- If we're executing here or below, lets' get science data! -->

    <Insert Filename="Insert/Science.xml">
        <RedefineArg Name="PeakDetectFDOMActive"><True/></RedefineArg>
        <RedefineArg Name="TimeWindowPeakReport"><Arg Name="TimeWindowPeakRpt"/></RedefineArg>
        <RedefineArg Name="PatchTracking"><True/></RedefineArg>
        <RedefineArg Name="LowPassWindowLength"><Arg Name="LowPassWindowLen"/></RedefineArg>
        <RedefineArg Name="PeakShallowBound"><Arg Name="PeakShallowBnd"/></RedefineArg>
        <RedefineArg Name="PeakDeepBound"><Arg Name="PeakDeepBnd"/></RedefineArg>
        <RedefineArg Name="OffPeakFractionHorizontal"><Arg Name="OffPeakFraction"/></RedefineArg>
    </Insert>

    <Guidance:SetSpeed>
        <Parallel/>
        <Setting><Guidance:SetSpeed.speed/><Arg Name="Speed"/></Setting>
    </Guidance:SetSpeed>

    <Guidance:DepthEnvelope>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.minDepth/><Arg Name="YoYoMinDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="YoYoMaxDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:DepthEnvelope.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:DepthEnvelope>

    <Guidance:YoYo>
        <Parallel/>
        <Setting><Guidance:YoYo.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:YoYo.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:YoYo>

    <Aggregate Id="PatchDetectHorizontal">

        <Sequence Repeat="Repeat"/>

        <Aggregate Id="PatchDetection">

            <When>
                <Arg Name="PatchDetectOn"/>
            </When>

            <Trigger:PeakDetectHorizontal Id="PeakDetectHorizontalTrigger">
                <Sequence/>
                <Break><Arg Name="WpDone"/>
                </Break>
                <Setting><Trigger:PeakDetectHorizontal.patchTracking/><Arg Name="PatchTrackingHorizontal"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.detectFrom/><Arg Name="Science:PeakFDOM"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.depthFrom/><Arg Name="Science:PeakFDOMDepth"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.latitudeFrom/><Arg Name="Science:PeakFDOMLatitude"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.longitudeFrom/><Arg Name="Science:PeakFDOMLongitude"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.beginThreshold/><Arg Name="BeginThreshold"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.offPeakFraction/><Arg Name="OffPeakFraction"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.filterWidth/><Arg Name="FilterWidth"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.centerPeak/><Arg Name="PatchMode"/></Setting>
                <OutputArg Name="PatchFDOM"><Trigger:PeakDetectHorizontal.peakDetect/></OutputArg>
                <OutputArg Name="PatchFDOMDepth"><Trigger:PeakDetectHorizontal.peakDepth/></OutputArg>
                <OutputArg Name="PatchFDOMLatitude"><Trigger:PeakDetectHorizontal.peakLatitude/></OutputArg>
                <OutputArg Name="PatchFDOMLongitude"><Trigger:PeakDetectHorizontal.peakLongitude/></OutputArg>
                <OutputArg Name="PatchFDOMDistance"><Trigger:PeakDetectHorizontal.peakDistance/></OutputArg>
            </Trigger:PeakDetectHorizontal>

            <Syslog Severity="Important">Fell below OffPeakFraction. Patch value is <Arg Name="PatchFDOM"/><Units:part_per_billion/> at lat = <Arg Name="PatchFDOMLatitude"/><Units:degree/>, lon = <Arg Name="PatchFDOMLongitude"/><Units:degree/>, dep = <Arg Name="PatchFDOMDepth"/><Units:meter/>, distance = <Arg Name="PatchFDOMDistance"/><Units:meter/></Syslog>

            <SendData Service="Express"><Arg Name="PatchFDOM"/><Arg Name="PatchFDOMDepth"/><Arg Name="PatchFDOMLatitude"/><Arg Name="PatchFDOMLongitude"/>
            </SendData>

            <Assign Id="AssignPatchDetectOff"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

        </Aggregate>

        <Assign Id="AssignPatchDetectOn"><Sequence/><Arg Name="PatchDetectOn"/><True/></Assign>

        <Syslog Severity="Important">Next: bearing for CrossLeg: <Arg Name="WpBearing"/><Units:degree/>. WpMaxDistance = <Arg Name="WpMaxDistance"/><Units:meter/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>.</Syslog>

        <Aggregate Id="CrossLeg">

            <Description>
                This is a long leg across the width of the patch. Also the first
                leg in a mission run. Two waypoints run in parallel: a short run
                to the surfacing point, and a longer run to the edge of the
                patch.
            </Description>

            <Sequence/>

            <Break><Arg Name="WpDone"/>
                <Or><Arg Name="PatchDetectOn"/><Eq><False/></Eq></Or>
            </Break>

            <Guidance:Waypoint Id="CrossSurfaceWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="PatchFDOMDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Call RefId="SurfaceComms"/>

            <Guidance:Waypoint Id="CrossPeakWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="WpMaxDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Syslog Severity="Important">CrossPeakWp done. Lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchFDOM"/><Units:part_per_billion/> at lat = <Arg Name="PatchFDOMLatitude"/><Units:degree/>, lon = <Arg Name="PatchFDOMLongitude"/><Units:degree/>, dep = <Arg Name="PatchFDOMDepth"/><Units:meter/>, distance = <Arg Name="PatchFDOMDistance"/><Units:meter/></Syslog>

            <Assign Id="AssignPatchDetectOffInCrossLeg"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

            <Assign Id="AssignWpDoneInCrossLeg"><Sequence/><Arg Name="WpDone"/><True/></Assign>

        </Aggregate>

        <Assign Id="AssignWpBearingForInLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Add><Arg Name="Reverse"/></Add><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

        <Syslog Severity="Important">Next: bearing for InLeg: <Arg Name="WpBearing"/><Units:degree/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchFDOM"/><Units:part_per_billion/> at lat = <Arg Name="PatchFDOMLatitude"/><Units:degree/>, lon = <Arg Name="PatchFDOMLongitude"/><Units:degree/>, dep = <Arg Name="PatchFDOMDepth"/><Units:meter/>, distance = <Arg Name="PatchFDOMDistance"/><Units:meter/></Syslog>

        <Guidance:Waypoint Id="InLegWp">
            <Description>
                Simply drive back towards the patch center
            </Description>
            <Sequence/>
            <Timeout Duration="WpTimeout"/>
            <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="PatchFDOMDistance"/></Setting>
            <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
            <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
        </Guidance:Waypoint>

        <Assign Id="AssignWpBearingForOutLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Sub><Arg Name="Turn"/></Sub><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

        <Syslog Severity="Important">Next: bearing for OutLeg: <Arg Name="WpBearing"/><Units:degree/>. WpMaxDistance = <Arg Name="WpMaxDistance"/><Units:meter/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchFDOM"/><Units:part_per_billion/> at lat = <Arg Name="PatchFDOMLatitude"/><Units:degree/>, lon = <Arg Name="PatchFDOMLongitude"/><Units:degree/>, dep = <Arg Name="PatchFDOMDepth"/><Units:meter/>, distance = <Arg Name="PatchFDOMDistance"/><Units:meter/></Syslog>

        <Call RefId="SurfaceCommsSplit"/>

        <Assign Id="AssignPatchDetectOnForOutLeg"><Sequence/><Arg Name="PatchDetectOn"/><True/></Assign>

        <Aggregate Id="OutLeg">

            <Description>
                Drive outward until edge of patch is detected.
            </Description>

            <Sequence/>

            <Break><Arg Name="WpDone"/>
                <Or><Arg Name="PatchDetectOn"/><Eq><False/></Eq></Or>
            </Break>

            <Guidance:Waypoint Id="OutLegWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="WpMaxDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Assign Id="AssignPatchDetectOffInOutLeg"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

            <Assign Id="AssignWpDoneInOutLeg"><Sequence/><Arg Name="WpDone"/><True/></Assign>

        </Aggregate>

        <Assign Id="AssignWpBearingForCrossLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Add><Arg Name="Reverse"/></Add><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

    </Aggregate>

</Mission>


2018-09-26T19:21:45.099Z,1537989705.099 [CommandLine](IMPORTANT): Loaded ./Missions/Science/trackPatchFDOM.xml
2018-09-26T19:21:59.450Z,1537989719.450 [CommandLine](IMPORTANT): got command set trackPatchFDOM.MaxDepth 15.000000 meter
2018-09-26T19:21:59.451Z,1537989719.451 [CommandLine](IMPORTANT): got command set trackPatchFDOM.MinOffshore 1000.000000 meter
2018-09-26T19:21:59.452Z,1537989719.452 [CommandLine](IMPORTANT): got command set trackPatchFDOM.NeedCommsTime 20.000000 minute
2018-09-26T19:21:59.457Z,1537989719.457 [CommandLine](IMPORTANT): got command set trackPatchFDOM.MissionTimeout 3.000000 hour
2018-09-26T19:22:11.028Z,1537989731.028 [CommandLine](IMPORTANT): got command set trackPatchFDOM.YoYoMinDepth 0.300000 meter
2018-09-26T19:22:11.028Z,1537989731.028 [CommandLine](IMPORTANT): got command set trackPatchFDOM.YoYoMaxDepth 4.000000 meter
2018-09-26T19:22:11.069Z,1537989731.069 [CommandLine](IMPORTANT): got command set trackPatchFDOM.WpMaxDistance 200.000000 meter
2018-09-26T19:22:11.070Z,1537989731.070 [CommandLine](IMPORTANT): got command set trackPatchFDOM.WpTimeout 15.000000 minute
2018-09-26T19:22:11.071Z,1537989731.071 [CommandLine](IMPORTANT): got command run 
2018-09-26T19:22:11.073Z,1537989731.073 [CommandLine](IMPORTANT): Running 
2018-09-26T19:22:11.373Z,1537989731.373 [Default] Stopped
2018-09-26T19:22:11.373Z,1537989731.373 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-26T19:22:11.373Z,1537989731.373 [Default:B.GoToSurface] Stopped
2018-09-26T19:22:11.373Z,1537989731.373 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-26T19:22:11.373Z,1537989731.373 [Default:CheckIn] Stopped
2018-09-26T19:22:11.373Z,1537989731.373 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-26T19:22:11.374Z,1537989731.374 [Default:CheckIn:C.Wait] Stopped
2018-09-26T19:22:11.374Z,1537989731.374 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-26T19:22:11.374Z,1537989731.374 [MissionManager](IMPORTANT): Started mission trackPatchFDOM
2018-09-26T19:22:11.374Z,1537989731.374 [trackPatchFDOM] Running Loop=1
2018-09-26T19:22:11.374Z,1537989731.374 [trackPatchFDOM](DEBUG): Aggregate::initialize trackPatchFDOM
2018-09-26T19:22:11.374Z,1537989731.374 [trackPatchFDOM:A.AltitudeEnvelope] Running Loop=1
2018-09-26T19:22:11.374Z,1537989731.374 [trackPatchFDOM:A.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-26T19:22:11.375Z,1537989731.375 [trackPatchFDOM:B.DepthEnvelope] Running Loop=1
2018-09-26T19:22:11.375Z,1537989731.375 [trackPatchFDOM:B.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-26T19:22:11.375Z,1537989731.375 [trackPatchFDOM:F.OffshoreEnvelope] Running Loop=1
2018-09-26T19:22:11.375Z,1537989731.375 [trackPatchFDOM:F.OffshoreEnvelope](DEBUG): Initialize OffshoreEnvelopeComponent.
2018-09-26T19:22:11.375Z,1537989731.375 [trackPatchFDOM:G.WaterDepthEnvelope] Running Loop=1
2018-09-26T19:22:11.375Z,1537989731.375 [trackPatchFDOM:G.WaterDepthEnvelope](DEBUG): Initialize WaterDepthEnvelopeComponent.
2018-09-26T19:22:11.375Z,1537989731.375 [trackPatchFDOM:H.Pitch] Running Loop=1
2018-09-26T19:22:11.375Z,1537989731.375 [trackPatchFDOM:H.Pitch](DEBUG): Initialize.
2018-09-26T19:22:11.376Z,1537989731.376 [trackPatchFDOM:I.Buoyancy] Running Loop=1
2018-09-26T19:22:11.376Z,1537989731.376 [trackPatchFDOM:I.Buoyancy](DEBUG): Initialize Buoyancy Component.
2018-09-26T19:22:11.376Z,1537989731.376 [trackPatchFDOM:Science] Running Loop=1
2018-09-26T19:22:11.376Z,1537989731.376 [trackPatchFDOM:Science](DEBUG): Aggregate::initialize trackPatchFDOM:Science
2018-09-26T19:22:11.376Z,1537989731.376 [trackPatchFDOM:Science:A] Running Loop=1
2018-09-26T19:22:11.376Z,1537989731.376 [trackPatchFDOM:Science:B] Running Loop=1
2018-09-26T19:22:11.376Z,1537989731.376 [trackPatchFDOM:Science:C] Running Loop=1
2018-09-26T19:22:11.376Z,1537989731.376 [trackPatchFDOM:Science:D] Running Loop=1
2018-09-26T19:22:11.376Z,1537989731.376 [trackPatchFDOM:Science:E] Running Loop=1
2018-09-26T19:22:11.376Z,1537989731.376 [trackPatchFDOM:Science:F] Running Loop=1
2018-09-26T19:22:11.381Z,1537989731.381 [trackPatchFDOM:Science:G] Running Loop=1
2018-09-26T19:22:11.381Z,1537989731.381 [trackPatchFDOM:Science:Read_Oil] Running Loop=1
2018-09-26T19:22:11.381Z,1537989731.381 [trackPatchFDOM:Science:PeakDetectChl] Running Loop=1
2018-09-26T19:22:11.381Z,1537989731.381 [trackPatchFDOM:Science:PeakDetectChl](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectChl
2018-09-26T19:22:11.381Z,1537989731.381 [trackPatchFDOM:Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:22:11.381Z,1537989731.381 [trackPatchFDOM:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:22:11.382Z,1537989731.382 [trackPatchFDOM:Science:HighestChlPeakReport] Running Loop=1
2018-09-26T19:22:11.383Z,1537989731.383 [trackPatchFDOM:Science:HighestChlPeakReport](DEBUG): Aggregate::initialize trackPatchFDOM:Science:HighestChlPeakReport
2018-09-26T19:22:11.383Z,1537989731.383 [trackPatchFDOM:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2018-09-26T19:22:11.383Z,1537989731.383 [trackPatchFDOM:Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2018-09-26T19:22:11.383Z,1537989731.383 [trackPatchFDOM:Science:PeakDetectNO3] Running Loop=1
2018-09-26T19:22:11.383Z,1537989731.383 [trackPatchFDOM:Science:PeakDetectNO3](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectNO3
2018-09-26T19:22:11.384Z,1537989731.384 [trackPatchFDOM:Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:22:11.384Z,1537989731.384 [trackPatchFDOM:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:22:11.389Z,1537989731.389 [trackPatchFDOM:Science:PeakDetectOil] Running Loop=1
2018-09-26T19:22:11.389Z,1537989731.389 [trackPatchFDOM:Science:PeakDetectOil](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectOil
2018-09-26T19:22:11.389Z,1537989731.389 [trackPatchFDOM:Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:22:11.389Z,1537989731.389 [trackPatchFDOM:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:22:11.391Z,1537989731.391 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:22:11.391Z,1537989731.391 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:22:11.391Z,1537989731.391 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:22:11.391Z,1537989731.391 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:22:11.392Z,1537989731.392 [trackPatchFDOM:K.SetSpeed] Running Loop=1
2018-09-26T19:22:11.392Z,1537989731.392 [trackPatchFDOM:K.SetSpeed](DEBUG): Initialize.
2018-09-26T19:22:11.392Z,1537989731.392 [trackPatchFDOM:L.DepthEnvelope] Running Loop=1
2018-09-26T19:22:11.392Z,1537989731.392 [trackPatchFDOM:L.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-26T19:22:11.397Z,1537989731.397 [trackPatchFDOM:M.YoYo] Running Loop=1
2018-09-26T19:22:11.397Z,1537989731.397 [trackPatchFDOM:M.YoYo](DEBUG): Initialize YoYoComponent.
2018-09-26T19:22:11.397Z,1537989731.397 [trackPatchFDOM:SurfaceCommsSplit] Running Loop=1
2018-09-26T19:22:11.398Z,1537989731.398 [trackPatchFDOM:SurfaceCommsSplit](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceCommsSplit
2018-09-26T19:22:11.398Z,1537989731.398 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface] Running Loop=1
2018-09-26T19:22:11.398Z,1537989731.398 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-26T19:22:11.398Z,1537989731.398 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-26T19:22:11.399Z,1537989731.399 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-26T19:22:11.399Z,1537989731.399 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-26T19:22:11.399Z,1537989731.399 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-26T19:22:11.400Z,1537989731.400 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-26T19:22:11.402Z,1537989731.402 [trackPatchFDOM:M.YoYo] Running Loop=1
2018-09-26T19:22:11.403Z,1537989731.403 [trackPatchFDOM:L.DepthEnvelope] Running Loop=1
2018-09-26T19:22:11.413Z,1537989731.413 [trackPatchFDOM:K.SetSpeed] Running Loop=1
2018-09-26T19:22:11.414Z,1537989731.414 [trackPatchFDOM:Science] Running Loop=1
2018-09-26T19:22:11.430Z,1537989731.430 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:22:11.431Z,1537989731.431 [trackPatchFDOM:Science:PeakDetectOil] Stopped
2018-09-26T19:22:11.432Z,1537989731.432 [trackPatchFDOM:Science:PeakDetectOil](DEBUG): Aggregate::uninitialize trackPatchFDOM:Science:PeakDetectOil
2018-09-26T19:22:11.432Z,1537989731.432 [trackPatchFDOM:Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2018-09-26T19:22:11.432Z,1537989731.432 [trackPatchFDOM:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:22:11.432Z,1537989731.432 [trackPatchFDOM:Science:PeakDetectNO3] Stopped
2018-09-26T19:22:11.432Z,1537989731.432 [trackPatchFDOM:Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize trackPatchFDOM:Science:PeakDetectNO3
2018-09-26T19:22:11.432Z,1537989731.432 [trackPatchFDOM:Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2018-09-26T19:22:11.432Z,1537989731.432 [trackPatchFDOM:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:22:11.432Z,1537989731.432 [trackPatchFDOM:Science:HighestChlPeakReport] Stopped
2018-09-26T19:22:11.432Z,1537989731.432 [trackPatchFDOM:Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize trackPatchFDOM:Science:HighestChlPeakReport
2018-09-26T19:22:11.432Z,1537989731.432 [trackPatchFDOM:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2018-09-26T19:22:11.432Z,1537989731.432 [trackPatchFDOM:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-26T19:22:11.437Z,1537989731.437 [trackPatchFDOM:Science:PeakDetectChl] Stopped
2018-09-26T19:22:11.437Z,1537989731.437 [trackPatchFDOM:Science:PeakDetectChl](DEBUG): Aggregate::uninitialize trackPatchFDOM:Science:PeakDetectChl
2018-09-26T19:22:11.437Z,1537989731.437 [trackPatchFDOM:Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2018-09-26T19:22:11.437Z,1537989731.437 [trackPatchFDOM:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:22:11.437Z,1537989731.437 [trackPatchFDOM:Science:Read_Oil] Running Loop=1
2018-09-26T19:22:11.438Z,1537989731.438 [trackPatchFDOM:Science:Read_Oil](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-26T19:22:11.439Z,1537989731.439 [trackPatchFDOM:Science:G] Stopped
2018-09-26T19:22:11.439Z,1537989731.439 [trackPatchFDOM:Science:F] Stopped
2018-09-26T19:22:11.439Z,1537989731.439 [trackPatchFDOM:Science:E] Stopped
2018-09-26T19:22:11.439Z,1537989731.439 [trackPatchFDOM:Science:D] Stopped
2018-09-26T19:22:11.439Z,1537989731.439 [trackPatchFDOM:Science:C] Running Loop=1
2018-09-26T19:22:11.439Z,1537989731.439 [trackPatchFDOM:Science:C](DEBUG): Initialize ReadDataComponent to sense sea_water_temperature
2018-09-26T19:22:11.440Z,1537989731.440 [trackPatchFDOM:Science:C](DEBUG): Initialize ReadDataComponent to sense sea_water_salinity
2018-09-26T19:22:11.446Z,1537989731.446 [trackPatchFDOM:Science:B] Stopped
2018-09-26T19:22:11.446Z,1537989731.446 [trackPatchFDOM:Science:A] Running Loop=1
2018-09-26T19:22:11.447Z,1537989731.447 [trackPatchFDOM:Science:A](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_oxygen_in_sea_water
2018-09-26T19:22:11.447Z,1537989731.447 [trackPatchFDOM:I.Buoyancy] Running Loop=1
2018-09-26T19:22:11.448Z,1537989731.448 [trackPatchFDOM:H.Pitch] Running Loop=1
2018-09-26T19:22:11.458Z,1537989731.458 [trackPatchFDOM:G.WaterDepthEnvelope] Running Loop=1
2018-09-26T19:22:11.459Z,1537989731.459 [trackPatchFDOM:F.OffshoreEnvelope] Running Loop=1
2018-09-26T19:22:11.473Z,1537989731.473 [trackPatchFDOM:SurfaceCommsSplit:B] Running Loop=1
2018-09-26T19:22:11.473Z,1537989731.473 [trackPatchFDOM:SurfaceCommsSplit:B](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceCommsSplit:B
2018-09-26T19:22:11.473Z,1537989731.473 [trackPatchFDOM:SurfaceCommsSplit:B:A] Running Loop=1
2018-09-26T19:22:11.473Z,1537989731.473 [trackPatchFDOM:B.DepthEnvelope] Running Loop=1
2018-09-26T19:22:11.475Z,1537989731.475 [trackPatchFDOM:A.AltitudeEnvelope] Running Loop=1
2018-09-26T19:22:11.517Z,1537989731.517 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-26T19:22:11.517Z,1537989731.517 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-26T19:22:11.565Z,1537989731.565 [CTD_NeilBrown](INFO): Opening uart, block timeout 10ths=4
2018-09-26T19:22:11.787Z,1537989731.787 [trackPatchFDOM:SurfaceCommsSplit:B:A](INFO): ##UnpackSplit##
2018-09-26T19:22:11.788Z,1537989731.788 [trackPatchFDOM:SurfaceCommsSplit:B:A] Stopped
2018-09-26T19:22:11.788Z,1537989731.788 [trackPatchFDOM:SurfaceCommsSplit:B](INFO): Completed trackPatchFDOM:SurfaceCommsSplit:B
2018-09-26T19:22:11.793Z,1537989731.793 [trackPatchFDOM:SurfaceCommsSplit:B] Stopped
2018-09-26T19:22:11.793Z,1537989731.793 [trackPatchFDOM:SurfaceCommsSplit:B](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceCommsSplit:B
2018-09-26T19:22:11.793Z,1537989731.793 [trackPatchFDOM:SurfaceCommsSplit:C] Running Loop=1
2018-09-26T19:22:11.793Z,1537989731.793 [trackPatchFDOM:SurfaceCommsSplit:C](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceCommsSplit:C
2018-09-26T19:22:11.793Z,1537989731.793 [trackPatchFDOM:SurfaceCommsSplit:C:A] Running Loop=1
2018-09-26T19:22:11.969Z,1537989731.969 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:22:12.207Z,1537989732.207 [trackPatchFDOM:M.YoYo] Preempted
2018-09-26T19:22:12.207Z,1537989732.207 [trackPatchFDOM:L.DepthEnvelope] Preempted
2018-09-26T19:22:12.207Z,1537989732.207 [trackPatchFDOM:K.SetSpeed] Preempted
2018-09-26T19:22:12.207Z,1537989732.207 [trackPatchFDOM:Science] Preempted
2018-09-26T19:22:12.207Z,1537989732.207 [trackPatchFDOM:Science:A] Preempted
2018-09-26T19:22:12.208Z,1537989732.208 [trackPatchFDOM:Science:C] Preempted
2018-09-26T19:22:12.208Z,1537989732.208 [trackPatchFDOM:Science:Read_Oil] Preempted
2018-09-26T19:22:12.208Z,1537989732.208 [trackPatchFDOM:Science:PeakDetectFDOM] Preempted
2018-09-26T19:22:12.208Z,1537989732.208 [trackPatchFDOM:I.Buoyancy] Preempted
2018-09-26T19:22:12.208Z,1537989732.208 [trackPatchFDOM:H.Pitch] Preempted
2018-09-26T19:22:12.208Z,1537989732.208 [trackPatchFDOM:G.WaterDepthEnvelope] Preempted
2018-09-26T19:22:12.208Z,1537989732.208 [trackPatchFDOM:F.OffshoreEnvelope] Preempted
2018-09-26T19:22:12.209Z,1537989732.209 [trackPatchFDOM:SurfaceCommsSplit:C:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-26T19:22:12.381Z,1537989732.381 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:22:12.523Z,1537989732.523 [NAL9602](INFO): Powering up
2018-09-26T19:22:12.971Z,1537989732.971 [RDI_Pathfinder](ERROR): Failed to parse:
:SA,   +0.00,   +0.00,  0.00
2018-09-26T19:22:13.685Z,1537989733.685 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-26T19:22:18.057Z,1537989738.057 [Aanderaa_O2](INFO): Powering down
2018-09-26T19:22:23.558Z,1537989743.558 [NAL9602](INFO): NAL9602 initialized
2018-09-26T19:22:42.364Z,1537989762.364 [NAL9602](INFO): SBD MO Status=0, MOMSN=1728, MT Status=0, MTMSN=0
2018-09-26T19:22:42.364Z,1537989762.364 [NAL9602](INFO): No messages in MT queue
2018-09-26T19:23:28.688Z,1537989808.688 [DataOverHttps](IMPORTANT): SBD MTMSN=20180926T192328
2018-09-26T19:23:33.082Z,1537989813.082 [DataOverHttps](INFO): Received command:stop
2018-09-26T19:23:33.137Z,1537989813.137 [CommandLine](IMPORTANT): got command stop
2018-09-26T19:23:33.137Z,1537989813.137 [Supervisor](INFO): Stop Mission called by CommandLine::commandStop
2018-09-26T19:23:33.145Z,1537989813.145 [MissionManager](INFO): MissionManager is completed.
2018-09-26T19:23:33.146Z,1537989813.146 [MissionManager](INFO): Uninitializing Mission trackPatchFDOM
2018-09-26T19:23:33.146Z,1537989813.146 [trackPatchFDOM] Stopped
2018-09-26T19:23:33.146Z,1537989813.146 [trackPatchFDOM](DEBUG): Aggregate::uninitialize trackPatchFDOM
2018-09-26T19:23:33.146Z,1537989813.146 [trackPatchFDOM:A.AltitudeEnvelope] Stopped
2018-09-26T19:23:33.146Z,1537989813.146 [trackPatchFDOM:A.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-26T19:23:33.146Z,1537989813.146 [trackPatchFDOM:B.DepthEnvelope] Stopped
2018-09-26T19:23:33.146Z,1537989813.146 [trackPatchFDOM:B.DepthEnvelope](DEBUG): Uninitialize.
2018-09-26T19:23:33.146Z,1537989813.146 [trackPatchFDOM:SurfaceCommsSplit] Stopped
2018-09-26T19:23:33.146Z,1537989813.146 [trackPatchFDOM:SurfaceCommsSplit](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceCommsSplit
2018-09-26T19:23:33.147Z,1537989813.147 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface] Stopped
2018-09-26T19:23:33.147Z,1537989813.147 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-26T19:23:33.147Z,1537989813.147 [trackPatchFDOM:SurfaceCommsSplit:C] Stopped
2018-09-26T19:23:33.147Z,1537989813.147 [trackPatchFDOM:SurfaceCommsSplit:C](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceCommsSplit:C
2018-09-26T19:23:33.147Z,1537989813.147 [trackPatchFDOM:SurfaceCommsSplit:C:A] Stopped
2018-09-26T19:23:33.147Z,1537989813.147 [trackPatchFDOM:F.OffshoreEnvelope] Stopped
2018-09-26T19:23:33.147Z,1537989813.147 [trackPatchFDOM:F.OffshoreEnvelope](DEBUG): Uninitialize OffshoreEnvelopeComponent.
2018-09-26T19:23:33.147Z,1537989813.147 [trackPatchFDOM:G.WaterDepthEnvelope] Stopped
2018-09-26T19:23:33.147Z,1537989813.147 [trackPatchFDOM:G.WaterDepthEnvelope](DEBUG): Uninitialize WaterDepthEnvelopeComponent.
2018-09-26T19:23:33.147Z,1537989813.147 [trackPatchFDOM:H.Pitch] Stopped
2018-09-26T19:23:33.147Z,1537989813.147 [trackPatchFDOM:I.Buoyancy] Stopped
2018-09-26T19:23:33.148Z,1537989813.148 [trackPatchFDOM:I.Buoyancy](DEBUG): Uninitialize Buoyancy Component.
2018-09-26T19:23:33.148Z,1537989813.148 [trackPatchFDOM:Science] Stopped
2018-09-26T19:23:33.148Z,1537989813.148 [trackPatchFDOM:Science](DEBUG): Aggregate::uninitialize trackPatchFDOM:Science
2018-09-26T19:23:33.148Z,1537989813.148 [trackPatchFDOM:Science:A] Stopped
2018-09-26T19:23:33.148Z,1537989813.148 [trackPatchFDOM:Science:C] Stopped
2018-09-26T19:23:33.148Z,1537989813.148 [trackPatchFDOM:Science:Read_Oil] Stopped
2018-09-26T19:23:33.148Z,1537989813.148 [trackPatchFDOM:Science:PeakDetectFDOM] Stopped
2018-09-26T19:23:33.148Z,1537989813.148 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::uninitialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:23:33.148Z,1537989813.148 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:23:33.148Z,1537989813.148 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:23:33.148Z,1537989813.148 [trackPatchFDOM:K.SetSpeed] Stopped
2018-09-26T19:23:33.153Z,1537989813.153 [trackPatchFDOM:K.SetSpeed](DEBUG): Uninitialize.
2018-09-26T19:23:33.153Z,1537989813.153 [trackPatchFDOM:L.DepthEnvelope] Stopped
2018-09-26T19:23:33.153Z,1537989813.153 [trackPatchFDOM:L.DepthEnvelope](DEBUG): Uninitialize.
2018-09-26T19:23:33.153Z,1537989813.153 [trackPatchFDOM:M.YoYo] Stopped
2018-09-26T19:23:33.153Z,1537989813.153 [trackPatchFDOM:M.YoYo](DEBUG): Uninitialize YoYoComponent.
2018-09-26T19:23:33.492Z,1537989813.492 [MissionManager](IMPORTANT): Started mission Default
2018-09-26T19:23:33.492Z,1537989813.492 [Default] Running Loop=1
2018-09-26T19:23:33.492Z,1537989813.492 [Default](DEBUG): Aggregate::initialize Default
2018-09-26T19:23:33.492Z,1537989813.492 [Default:B.GoToSurface] Running Loop=1
2018-09-26T19:23:33.492Z,1537989813.492 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-26T19:23:33.492Z,1537989813.492 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-26T19:23:33.509Z,1537989813.509 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-26T19:23:33.509Z,1537989813.509 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-26T19:23:33.510Z,1537989813.510 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-26T19:23:33.510Z,1537989813.510 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-26T19:23:33.511Z,1537989813.511 [Default:A.Wait] Running Loop=1
2018-09-26T19:23:33.511Z,1537989813.511 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-26T19:23:46.714Z,1537989826.714 [Default:A.Wait](INFO): Done Waiting.
2018-09-26T19:23:46.714Z,1537989826.714 [Default:A.Wait] Stopped
2018-09-26T19:23:46.714Z,1537989826.714 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-26T19:23:47.118Z,1537989827.118 [Default:CheckIn] Running Loop=1
2018-09-26T19:23:47.118Z,1537989827.118 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-26T19:23:47.118Z,1537989827.118 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-26T19:23:49.063Z,1537989829.063 [NAL9602](INFO): GPS fix at 20180926T192349: (36.812503, -121.822555)
2018-09-26T19:23:49.171Z,1537989829.171 [Default:CheckIn:Read_GPS] Stopped
2018-09-26T19:23:49.171Z,1537989829.171 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-26T19:23:54.634Z,1537989834.634 [DataOverHttps](INFO): Sending 62 bytes from file Logs/20180926T190706/Courier0006.lzma
2018-09-26T19:23:55.394Z,1537989835.394 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Courier0006.lzma.bak
2018-09-26T19:23:55.394Z,1537989835.394 [DataOverHttps](INFO): SBD MOMSN=8601410
2018-09-26T19:24:04.530Z,1537989844.530 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180926T190706/Courier0009.lzma
2018-09-26T19:24:05.302Z,1537989845.302 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Courier0009.lzma.bak
2018-09-26T19:24:05.302Z,1537989845.302 [DataOverHttps](INFO): SBD MOMSN=8601415
2018-09-26T19:24:14.835Z,1537989854.835 [DataOverHttps](INFO): Sending 602 bytes from file Logs/20180926T190706/Express0007.lzma
2018-09-26T19:24:15.601Z,1537989855.601 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Express0007.lzma.bak
2018-09-26T19:24:15.601Z,1537989855.601 [DataOverHttps](INFO): SBD MOMSN=8601417
2018-09-26T19:24:20.940Z,1537989860.940 [NAL9602](INFO): Powering down
2018-09-26T19:24:25.233Z,1537989865.233 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180926T190706/Express0010.lzma
2018-09-26T19:24:26.002Z,1537989866.002 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Express0010.lzma.bak
2018-09-26T19:24:26.002Z,1537989866.002 [DataOverHttps](INFO): SBD MOMSN=8601443
2018-09-26T19:24:26.731Z,1537989866.731 [Default:CheckIn:Read_Iridium] Stopped
2018-09-26T19:24:26.732Z,1537989866.732 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-26T19:24:26.732Z,1537989866.732 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-26T19:25:41.642Z,1537989941.642 [DataOverHttps](IMPORTANT): SBD MTMSN=20180926T192541
2018-09-26T19:25:45.969Z,1537989945.969 [DataOverHttps](INFO): Received command:sched asap "load Science/trackPatchFDOM.xml;set trackPatchFDOM.MaxDepth 15 meter;set trackPatchFDOM.MinOffshore 1000 meter;set trackPatchFDOM.NeedCommsTime 20 minute;set trackPatchFDOM.MissionTimeout 3 hour" 1hy2 1 3
2018-09-26T19:25:45.991Z,1537989945.991 [CommandLine](IMPORTANT): got command schedule asap "load Science/trackPatchFDOM.xml;set trackPatchFDOM.MaxDepth 15 meter;set trackPatchFDOM.MinOffshore 1000 meter;set trackPatchFDOM.NeedCommsTime 20 minute;set trackPatchFDOM.MissionTimeout 3 hour" 1hy2 1 3.000000
2018-09-26T19:25:45.991Z,1537989945.991 [CommandLine](IMPORTANT): Scheduling command #1 of 3 with id=1hy2
2018-09-26T19:25:45.992Z,1537989945.992 [CommandLine](IMPORTANT): Scheduled #5 (#1 of 3 with id='1hy2'): "load Science/trackPatchFDOM.xml;set trackPatchFDOM.MaxDepth 15 meter;set trackPatchFDOM.MinOffshore 1000 meter;set trackPatchFDOM.NeedCommsTime 20 minute;set trackPatchFDOM.MissionTimeout 3 hour" ASAP
2018-09-26T19:25:46.710Z,1537989946.710 [DataOverHttps](IMPORTANT): SBD MTMSN=20180926T192547
2018-09-26T19:25:52.664Z,1537989952.664 [DataOverHttps](INFO): Received command:sched asap "set trackPatchFDOM.YoYoMinDepth .3 meter;set trackPatchFDOM.YoYoMaxDepth 3.5 meter;set trackPatchFDOM.WpMaxDistance 200 meter;set trackPatchFDOM.WpTimeout 10 minute;set trackPatchFDOM.PeakShallowBnd .3 meter" 1hy2 2 3
2018-09-26T19:25:52.718Z,1537989952.718 [CommandLine](IMPORTANT): got command schedule asap "set trackPatchFDOM.YoYoMinDepth .3 meter;set trackPatchFDOM.YoYoMaxDepth 3.5 meter;set trackPatchFDOM.WpMaxDistance 200 meter;set trackPatchFDOM.WpTimeout 10 minute;set trackPatchFDOM.PeakShallowBnd .3 meter" 1hy2 2 3.000000
2018-09-26T19:25:52.719Z,1537989952.719 [CommandLine](IMPORTANT): Scheduling command #2 of 3 with id=1hy2
2018-09-26T19:25:52.720Z,1537989952.720 [CommandLine](IMPORTANT): Scheduled #6 (#2 of 3 with id='1hy2'): "set trackPatchFDOM.YoYoMinDepth .3 meter;set trackPatchFDOM.YoYoMaxDepth 3.5 meter;set trackPatchFDOM.WpMaxDistance 200 meter;set trackPatchFDOM.WpTimeout 10 minute;set trackPatchFDOM.PeakShallowBnd .3 meter" ASAP
2018-09-26T19:25:53.418Z,1537989953.418 [DataOverHttps](IMPORTANT): SBD MTMSN=20180926T192553
2018-09-26T19:25:57.570Z,1537989957.570 [DataOverHttps](INFO): Received command:sched asap "set trackPatchFDOM.PeakDeepBnd 3.5 meter;run " 1hy2 3 3
2018-09-26T19:25:57.626Z,1537989957.626 [CommandLine](IMPORTANT): got command schedule asap "set trackPatchFDOM.PeakDeepBnd 3.5 meter;run " 1hy2 3 3.000000
2018-09-26T19:25:57.626Z,1537989957.626 [CommandLine](IMPORTANT): Scheduling command #3 of 3 with id=1hy2
2018-09-26T19:25:57.627Z,1537989957.627 [CommandLine](IMPORTANT): Scheduled #7 (#3 of 3 with id='1hy2'): "set trackPatchFDOM.PeakDeepBnd 3.5 meter;run " ASAP
2018-09-26T19:25:57.689Z,1537989957.689 [CommandLine](IMPORTANT): got command load ./Missions/Science/trackPatchFDOM.xml
2018-09-26T19:25:57.689Z,1537989957.689 [MissionManager](INFO): Loading Mission: ./Missions/Science/trackPatchFDOM.xml
2018-09-26T19:25:58.154Z,1537989958.154 [MissionManager](INFO): DefineArg trackPatchFDOM.MinAltitude = 5.000000 m
2018-09-26T19:25:58.156Z,1537989958.156 [MissionManager](INFO): DefineArg trackPatchFDOM.MaxDepth = 65.000000 m
2018-09-26T19:25:58.159Z,1537989958.159 [MissionManager](INFO): DefineArg trackPatchFDOM.MinWaterDepth = 10.000000 m
2018-09-26T19:25:58.161Z,1537989958.161 [MissionManager](INFO): DefineArg trackPatchFDOM.MinOffshore = 2000.000000 m
2018-09-26T19:25:58.163Z,1537989958.163 [MissionManager](INFO): DefineArg trackPatchFDOM.NeedCommsTime = 180.000000 min
2018-09-26T19:25:58.165Z,1537989958.165 [MissionManager](INFO): DefineArg trackPatchFDOM.MissionTimeout = 56.000000 h
2018-09-26T19:25:58.168Z,1537989958.168 [MissionManager](INFO): DefineArg trackPatchFDOM.MassDefault = 0.200000 cm
2018-09-26T19:25:58.171Z,1537989958.171 [MissionManager](INFO): DefineArg trackPatchFDOM.BuoyancyNeutral = 274.999999 cc
2018-09-26T19:25:58.173Z,1537989958.173 [MissionManager](INFO): DefineArg trackPatchFDOM.YoYoMinDepth = 5.000000 m
2018-09-26T19:25:58.175Z,1537989958.175 [MissionManager](INFO): DefineArg trackPatchFDOM.YoYoMaxDepth = 25.000000 m
2018-09-26T19:25:58.213Z,1537989958.213 [MissionManager](INFO): DefineArg trackPatchFDOM.YoYoUpPitch = 20.000000 arcdeg
2018-09-26T19:25:58.216Z,1537989958.216 [MissionManager](INFO): DefineArg trackPatchFDOM.YoYoDownPitch = -20.000000 arcdeg
2018-09-26T19:25:58.218Z,1537989958.218 [MissionManager](INFO): DefineArg trackPatchFDOM.Speed = 1.000000 m/s
2018-09-26T19:25:58.240Z,1537989958.240 [MissionManager](INFO): DefineArg trackPatchFDOM.WpMaxDistance = 1000.000000 m
2018-09-26T19:25:58.243Z,1537989958.243 [MissionManager](INFO): DefineArg trackPatchFDOM.WpTimeout = 8000.000000 s
2018-09-26T19:25:58.245Z,1537989958.245 [MissionManager](INFO): DefineArg trackPatchFDOM.WaterFrame = 1 bool
2018-09-26T19:25:58.247Z,1537989958.247 [MissionManager](INFO): DefineArg trackPatchFDOM.Repeat = 20.000000 count
2018-09-26T19:25:58.265Z,1537989958.265 [MissionManager](INFO): DefineArg trackPatchFDOM.Turn = 144.000000 arcdeg
2018-09-26T19:25:58.267Z,1537989958.267 [MissionManager](INFO): DefineArg trackPatchFDOM.Reverse = 180.000000 arcdeg
2018-09-26T19:25:58.269Z,1537989958.269 [MissionManager](INFO): DefineArg trackPatchFDOM.TwoPi = 360.000000 arcdeg
2018-09-26T19:25:58.271Z,1537989958.271 [MissionManager](INFO): DefineArg trackPatchFDOM.TimeWindowPeakRpt = nan min
2018-09-26T19:25:58.290Z,1537989958.290 [MissionManager](INFO): DefineArg trackPatchFDOM.LowPassWindowLen = 20.000000 count
2018-09-26T19:25:58.292Z,1537989958.292 [MissionManager](INFO): DefineArg trackPatchFDOM.PeakShallowBnd = 2.000000 m
2018-09-26T19:25:58.295Z,1537989958.295 [MissionManager](INFO): DefineArg trackPatchFDOM.PeakDeepBnd = 4.000000 m
2018-09-26T19:25:58.297Z,1537989958.297 [MissionManager](INFO): DefineArg trackPatchFDOM.FilterWidth = 4.000000 count
2018-09-26T19:25:58.299Z,1537989958.299 [MissionManager](INFO): DefineArg trackPatchFDOM.BeginThreshold = nan ug/l
2018-09-26T19:25:58.316Z,1537989958.316 [MissionManager](INFO): DefineArg trackPatchFDOM.OffPeakFraction = 80.000000 %
2018-09-26T19:25:58.319Z,1537989958.319 [MissionManager](INFO): DefineArg trackPatchFDOM.PatchMode = 0 bool
2018-09-26T19:25:58.320Z,1537989958.320 [MissionManager](INFO): DefineArg trackPatchFDOM.PatchTrackingHorizontal = 1 bool
2018-09-26T19:25:58.323Z,1537989958.323 [MissionManager](INFO): DefineArg trackPatchFDOM.WpBearing = -90.000000 arcdeg
2018-09-26T19:25:58.405Z,1537989958.405 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchDetectOn = 0 bool
2018-09-26T19:25:58.407Z,1537989958.407 [MissionManager](INFO): DefineOutput trackPatchFDOM.WpDone = 0 bool
2018-09-26T19:25:58.410Z,1537989958.410 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchFDOM = nan ug/l
2018-09-26T19:25:58.412Z,1537989958.412 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchFDOMDepth = nan m
2018-09-26T19:25:58.436Z,1537989958.436 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchFDOMLatitude = nan arcdeg
2018-09-26T19:25:58.438Z,1537989958.438 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchFDOMLongitude = nan arcdeg
2018-09-26T19:25:58.453Z,1537989958.453 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchFDOMDistance = 0.000000 m
2018-09-26T19:25:58.454Z,1537989958.454 [trackPatchFDOM:A.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-26T19:25:58.460Z,1537989958.460 [trackPatchFDOM:B.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-26T19:25:58.477Z,1537989958.477 [MissionManager](INFO): Inserting Stack: Missions/Insert/Surface.xml
2018-09-26T19:25:58.523Z,1537989958.523 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceCommsSplit.SurfaceDepthRate = nan m/s
2018-09-26T19:25:58.529Z,1537989958.529 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceCommsSplit.SurfacePitch = 20.000000 arcdeg
2018-09-26T19:25:58.531Z,1537989958.531 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceCommsSplit.SurfaceSpeed = 1.000000 m/s
2018-09-26T19:25:58.538Z,1537989958.538 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceCommsSplit.IridiumTimeout = 30.000000 min
2018-09-26T19:25:58.540Z,1537989958.540 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceCommsSplit.UnpackSplitAtSurface = 0 bool
2018-09-26T19:25:58.547Z,1537989958.547 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-26T19:25:58.579Z,1537989958.579 [MissionManager](INFO): RedefineArg trackPatchFDOM:SurfaceCommsSplit.SurfacePitch = value:20.000000 arcdeg
2018-09-26T19:25:58.585Z,1537989958.585 [MissionManager](INFO): RedefineArg trackPatchFDOM:SurfaceCommsSplit.SurfaceSpeed = value:1.000000 m/s
2018-09-26T19:25:58.587Z,1537989958.587 [MissionManager](INFO): RedefineArg trackPatchFDOM:SurfaceCommsSplit.UnpackSplitAtSurface = value:1 bool
2018-09-26T19:25:58.588Z,1537989958.588 [MissionManager](INFO): Inserting Stack: Missions/Insert/Surface.xml
2018-09-26T19:25:58.642Z,1537989958.642 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.SurfaceDepthRate = nan m/s
2018-09-26T19:25:58.644Z,1537989958.644 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.SurfacePitch = 20.000000 arcdeg
2018-09-26T19:25:58.647Z,1537989958.647 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.SurfaceSpeed = 1.000000 m/s
2018-09-26T19:25:58.649Z,1537989958.649 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.IridiumTimeout = 30.000000 min
2018-09-26T19:25:58.651Z,1537989958.651 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.UnpackSplitAtSurface = 0 bool
2018-09-26T19:25:58.652Z,1537989958.652 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-26T19:25:58.676Z,1537989958.676 [MissionManager](INFO): RedefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.SurfacePitch = value:20.000000 arcdeg
2018-09-26T19:25:58.701Z,1537989958.701 [MissionManager](INFO): RedefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.SurfaceSpeed = value:1.000000 m/s
2018-09-26T19:25:58.707Z,1537989958.707 [trackPatchFDOM:F.OffshoreEnvelope](DEBUG): Construct OffshoreEnvelope.
2018-09-26T19:25:58.782Z,1537989958.782 [trackPatchFDOM:G.WaterDepthEnvelope](DEBUG): Construct WaterDepthEnvelope.
2018-09-26T19:25:58.802Z,1537989958.802 [trackPatchFDOM:H.Pitch](DEBUG): Construct.
2018-09-26T19:25:58.814Z,1537989958.814 [trackPatchFDOM:I.Buoyancy](DEBUG): Construct Buoyancy.
2018-09-26T19:25:58.816Z,1537989958.816 [MissionManager](INFO): Inserting Stack: Missions/Insert/Science.xml
2018-09-26T19:25:59.098Z,1537989959.098 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.SampleISUS = 0 bool
2018-09-26T19:25:59.101Z,1537989959.101 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.SampleISUSmaxPitch = 60.000000 arcdeg
2018-09-26T19:25:59.103Z,1537989959.103 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.SampleISUSminPitch = -60.000000 arcdeg
2018-09-26T19:25:59.105Z,1537989959.105 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakDetectChlActive = 0 bool
2018-09-26T19:25:59.107Z,1537989959.107 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.TimeWindowPeakReport = nan min
2018-09-26T19:25:59.109Z,1537989959.109 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.HighestChlPeakReportActive = 0 bool
2018-09-26T19:25:59.111Z,1537989959.111 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PatchTracking = 0 bool
2018-09-26T19:25:59.113Z,1537989959.113 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.FilterWidthHorizontal = 3.000000 count
2018-09-26T19:25:59.115Z,1537989959.115 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.NumProfilesSlidingwindow = 100.000000 count
2018-09-26T19:25:59.118Z,1537989959.118 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.OffPeakFractionHorizontal = 80.000000 %
2018-09-26T19:25:59.119Z,1537989959.119 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakDetectNO3Active = 0 bool
2018-09-26T19:25:59.121Z,1537989959.121 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakDetectOilActive = 0 bool
2018-09-26T19:25:59.123Z,1537989959.123 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakDetectFDOMActive = 0 bool
2018-09-26T19:25:59.177Z,1537989959.177 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.UpwardDerivativeOfTemperatureActive = 0 bool
2018-09-26T19:25:59.180Z,1537989959.180 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledAanderaaO2 = 1.000000 bool
2018-09-26T19:25:59.196Z,1537989959.196 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledNeilBrown = 1.000000 bool
2018-09-26T19:25:59.218Z,1537989959.218 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledSeabird = 0.000000 bool
2018-09-26T19:25:59.229Z,1537989959.229 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledTurbulence_NPS = 0.000000 bool
2018-09-26T19:25:59.232Z,1537989959.232 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledWetLabsBB2FL = 0.000000 bool
2018-09-26T19:25:59.239Z,1537989959.239 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledWetLabsSeaOWL_UV_A = 1.000000 bool
2018-09-26T19:25:59.254Z,1537989959.254 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledISUS = 0.000000 bool
2018-09-26T19:25:59.256Z,1537989959.256 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.LowPassWindowLength = 20.000000 count
2018-09-26T19:25:59.266Z,1537989959.266 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakChlShallowBound = nan m
2018-09-26T19:25:59.268Z,1537989959.268 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakChlDeepBound = nan m
2018-09-26T19:25:59.271Z,1537989959.271 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakShallowBound = nan m
2018-09-26T19:25:59.290Z,1537989959.290 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakDeepBound = nan m
2018-09-26T19:25:59.292Z,1537989959.292 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakChl = 0.000000 ug/l
2018-09-26T19:25:59.299Z,1537989959.299 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakChlDepth = 0.000000 m
2018-09-26T19:25:59.313Z,1537989959.313 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakChlTemperature = 0.000000 degC
2018-09-26T19:25:59.315Z,1537989959.315 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakChlLatitude = nan arcdeg
2018-09-26T19:25:59.323Z,1537989959.323 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakChlLongitude = nan arcdeg
2018-09-26T19:25:59.325Z,1537989959.325 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakNO3 = 0.000000 umol/l
2018-09-26T19:25:59.327Z,1537989959.327 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakNO3Depth = 0.000000 m
2018-09-26T19:25:59.330Z,1537989959.330 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakNO3Latitude = nan arcdeg
2018-09-26T19:25:59.332Z,1537989959.332 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakNO3Longitude = nan arcdeg
2018-09-26T19:25:59.394Z,1537989959.394 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchChl = 0.000000 m
2018-09-26T19:25:59.397Z,1537989959.397 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchChlDepth = 0.000000 m
2018-09-26T19:25:59.399Z,1537989959.399 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchChlLatitude = nan arcdeg
2018-09-26T19:25:59.427Z,1537989959.427 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchChlLongitude = nan arcdeg
2018-09-26T19:25:59.429Z,1537989959.429 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchChlDistance = nan m
2018-09-26T19:25:59.431Z,1537989959.431 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakOil = 0.000000 kg/m3
2018-09-26T19:25:59.449Z,1537989959.449 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakOilDepth = 0.000000 m
2018-09-26T19:25:59.451Z,1537989959.451 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakOilLatitude = nan arcdeg
2018-09-26T19:25:59.473Z,1537989959.473 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakOilLongitude = nan arcdeg
2018-09-26T19:25:59.476Z,1537989959.476 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakFDOM = 0.000000 ppb
2018-09-26T19:25:59.478Z,1537989959.478 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakFDOMDepth = 0.000000 m
2018-09-26T19:25:59.480Z,1537989959.480 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakFDOMLatitude = nan arcdeg
2018-09-26T19:25:59.495Z,1537989959.495 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakFDOMLongitude = nan arcdeg
2018-09-26T19:25:59.498Z,1537989959.498 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchFDOMDistance = nan m
2018-09-26T19:25:59.593Z,1537989959.593 [trackPatchFDOM:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-26T19:25:59.632Z,1537989959.632 [trackPatchFDOM:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-26T19:25:59.691Z,1537989959.691 [trackPatchFDOM:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-26T19:25:59.726Z,1537989959.726 [trackPatchFDOM:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-26T19:25:59.755Z,1537989959.755 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-26T19:25:59.786Z,1537989959.786 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.PeakDetectFDOMActive = value:1 bool
2018-09-26T19:25:59.787Z,1537989959.787 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.TimeWindowPeakReport = reader:trackPatchFDOM.TimeWindowPeakRpt
2018-09-26T19:25:59.793Z,1537989959.793 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.PatchTracking = value:1 bool
2018-09-26T19:25:59.795Z,1537989959.795 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.LowPassWindowLength = reader:trackPatchFDOM.LowPassWindowLen
2018-09-26T19:25:59.796Z,1537989959.796 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.PeakShallowBound = reader:trackPatchFDOM.PeakShallowBnd
2018-09-26T19:25:59.802Z,1537989959.802 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.PeakDeepBound = reader:trackPatchFDOM.PeakDeepBnd
2018-09-26T19:25:59.804Z,1537989959.804 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.OffPeakFractionHorizontal = reader:trackPatchFDOM.OffPeakFraction
2018-09-26T19:25:59.804Z,1537989959.804 [trackPatchFDOM:K.SetSpeed](DEBUG): Construct.
2018-09-26T19:25:59.811Z,1537989959.811 [trackPatchFDOM:L.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-26T19:25:59.839Z,1537989959.839 [trackPatchFDOM:M.YoYo](DEBUG): Construct YoYo.
2018-09-26T19:25:59.856Z,1537989959.856 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-26T19:25:59.991Z,1537989959.991 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-26T19:26:00.025Z,1537989960.025 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-26T19:26:00.068Z,1537989960.068 [trackPatchFDOM:PatchDetectHorizontal:InLegWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-26T19:26:00.095Z,1537989960.095 [trackPatchFDOM:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-26T19:26:00.202Z,1537989960.202 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Trigger="Tethys/Trigger" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Trigger http://okeanids.mbari.org/tethys/Xml/Trigger.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="trackPatchFDOM">

    <Description>
        Vehicle runs yo-yos, with patch detect enabled for FDOM
        concentration_of_colored_dissolved_organic_matter_in_sea_water_expressed_as_equivalent_mass_fraction_of_quinine_sulfate_dihydrate
        concentration.
    </Description>

<!-- Vehicle safety parameters -->

    <DefineArg Name="MinAltitude"><Description>
        Minimum altitude for the entire mission.
    </Description><Units:meter/><Value>5</Value></DefineArg>

    <DefineArg Name="MaxDepth"><Description>
        Maximum depth for the entire mission.
    </Description><Units:meter/><Value>65</Value></DefineArg>

    <DefineArg Name="MinWaterDepth"><Description>
        Minimum water depth for the entire mission.
    </Description><Units:meter/><Value>10</Value></DefineArg>

    <DefineArg Name="MinOffshore"><Description>
        Minimum offshore distance for the entire mission.
    </Description><Units:meter/><Value>2000</Value></DefineArg>

    <DefineArg Name="NeedCommsTime"><Description>
        Maximum time between surfacings for communications
    </Description><Units:minute/><Value>180</Value></DefineArg>

    <DefineArg Name="MissionTimeout"><Description>
        Timeout for the entire mission
    </Description><Units:hour/><Value>56</Value></DefineArg>

    <DefineArg Name="MassDefault"><Description>
        Static setting for mass during the mission. Defaults to massDefault
        setting in the Config/Control.cfg file.
    </Description><Control:VerticalControl.massDefault/></DefineArg>

    <DefineArg Name="BuoyancyNeutral"><Description>
        Buoyancy bladder position while performing the YoYo behavior. Defaults
        to buoyancyNeutral setting in the Config/Control.cfg file.
    </Description><Control:VerticalControl.buoyancyNeutral/></DefineArg>

<!-- Basic guidance settings -->

    <DefineArg Name="YoYoMinDepth"><Description>
        Minimum depth during yo-yo's.
    </Description><Units:meter/><Value>5.0</Value></DefineArg>

    <DefineArg Name="YoYoMaxDepth"><Description>
        Maximum depth during yo-yo's.
    </Description><Units:meter/><Value>25.0</Value></DefineArg>

    <DefineArg Name="YoYoUpPitch"><Description>
        Pitch when yo-yo's are ascending.
    </Description><Units:degree/><Value>20.0</Value></DefineArg>

    <DefineArg Name="YoYoDownPitch"><Description>
        Pitch when yo-yo's are descending.
    </Description><Units:degree/><Value>-20.0</Value></DefineArg>

    <DefineArg Name="Speed"><Description>
        Vehicle speed.
    </Description><Units:meter_per_second/><Value>1</Value></DefineArg>

    <DefineArg Name="WpMaxDistance"><Description>
        Maximum length of each tracking leg
<!--debug
    </Description><Units:meter/><Value>7500</Value></DefineArg>
-->
    </Description><Units:meter/><Value>1000</Value></DefineArg>

    <DefineArg Name="WpTimeout"><Description>
        Maximum duration of each tracking leg
    </Description><Units:second/><Value>8000</Value></DefineArg>

    <DefineArg Name="WaterFrame"><Description>
        Set WaterFrame true to drive towards waypoints in the water frame of
        reference
    </Description><True/></DefineArg>

    <DefineArg Name="Repeat"><Description>
        Maximum number of tracking legs
    </Description><Units:count/><Value>20</Value></DefineArg>

<!-- Constant settings for each tracking leg -->

    <DefineArg Name="Turn"><Description>
        Amount to turn at each leg
    </Description><Units:degree/><Value>144</Value></DefineArg>

    <DefineArg Name="Reverse"><Description>
        Change in bearing which reverses vehicle direction
    </Description><Units:degree/><Value>180</Value></DefineArg>

    <DefineArg Name="TwoPi"><Description>
        Applied to stop run-up of angles
    </Description><Units:degree/><Value>360</Value></DefineArg>

    <DefineArg Name="TimeWindowPeakRpt"><Description>
        If greater than zero, report a peak every window. If NaN or zero, this
        variable is ignored.
    </Description><Units:minute/><Value>NaN</Value></DefineArg>

<!--debug
    </Description><Units:minute/><Value>1</Value></DefineArg>
-->

    <DefineArg Name="LowPassWindowLen"><Description>
        Low-pass window length (based on depth sensor sampling interval 0.4
        second) for low-pass filtering.
    </Description><Units:count/><Value>20</Value></DefineArg>

    <DefineArg Name="PeakShallowBnd"><Description>
        Shallow depth bound for detecting peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>2</Value></DefineArg>

    <DefineArg Name="PeakDeepBnd"><Description>
        Deep depth bound for detecting peak on each descent or ascent profile.
    </Description><Units:meter/><Value>4</Value></DefineArg>

    <DefineArg Name="FilterWidth"><Description>
        Width of boxcar filter used in horizontal patch detection
    </Description><Units:count/><Value>4</Value></DefineArg>

    <DefineArg Name="BeginThreshold"><Description>
        If non-NaN, sets threshold for starting horizontal patch detection
    </Description><Units:microgram_per_liter/><Value>NaN</Value></DefineArg>

    <DefineArg Name="OffPeakFraction"><Description>
        When filtered horizontal value is this fraction of the peak, consider it
        outside the patch.
    </Description><Units:percent/><Value>80</Value></DefineArg>

    <DefineArg Name="PatchMode"><Description>
        If true, use center of "in peak" range as the turn-around point. If
        false use maximum horizontal peak location as the turn-around point.
    </Description><False/></DefineArg>

    <DefineArg Name="PatchTrackingHorizontal"><Description>
        Set true to turn on horizontal patch tracking
    </Description><True/></DefineArg>

<!-- Variable Settings for each tracking leg -->

    <DefineArg Name="WpBearing"><Description>
        Bearing being followed in the current leg. Set this to initialize start
        direction of patch tracking.
    </Description><Units:degree/><Value>-90</Value></DefineArg>

    <DefineOutput Name="PatchDetectOn"><Description>
        Mission sets this to true when the patch has been crossed.
    </Description><False/></DefineOutput>

    <DefineOutput Name="WpDone"><Description>
        Mission sets this to true when the cross-patch waypoint has been
        reached.
    </Description><False/></DefineOutput>

    <DefineOutput Name="PatchFDOM"><Units:microgram_per_liter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchFDOMDepth"><Units:meter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchFDOMLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchFDOMLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchFDOMDistance"><Units:meter/><Value>0</Value></DefineOutput>

<!-- The timeout -->

    <Timeout Duration="MissionTimeout"/>

<!-- And now the mission -->

    <Guidance:AltitudeEnvelope>
        <Parallel/>
        <Setting><Guidance:AltitudeEnvelope.minAltitude/><Arg Name="MinAltitude"/></Setting>
    </Guidance:AltitudeEnvelope>

    <Guidance:DepthEnvelope>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="MaxDepth"/></Setting>
    </Guidance:DepthEnvelope>

    <Insert Filename="Insert/Surface.xml" Id="SurfaceCommsSplit">
        <RedefineArg Name="SurfacePitch"><Units:degree/><Value>20</Value></RedefineArg>
        <RedefineArg Name="SurfaceSpeed"><Units:meter_per_second/><Value>1</Value></RedefineArg>
        <RedefineArg Name="UnpackSplitAtSurface"><True/></RedefineArg>
    </Insert>

    <Aggregate Id="SurfaceComms">

        <When>
            <Called/>
        </When>

        <Insert Filename="Insert/Surface.xml">
            <RedefineArg Name="SurfacePitch"><Units:degree/><Value>20</Value></RedefineArg>
            <RedefineArg Name="SurfaceSpeed"><Units:meter_per_second/><Value>1</Value></RedefineArg>
        </Insert>

    </Aggregate>

<!-- GPS Update.  Don't go too long w/o a GPS fix. -->

    <Aggregate Id="NeedComms">

        <When>
            <Universal:platform_pitch_angle/>
            <Gt><Units:degree/><Value>0</Value></Gt>
            <And><Elapsed><Universal:time_fix/></Elapsed><Gt><Arg Name="NeedCommsTime"/></Gt></And>
            <Or><Elapsed><Universal:time_fix/></Elapsed><Gt><Arg Name="NeedCommsTime"/><Add><Units:minute/><Value>10</Value></Add></Gt></Or>
        </When>

        <Syslog Severity="Important">NeedComms Timeout Surfacing</Syslog>

        <Call RefId="SurfaceComms"/>

    </Aggregate>

    <Guidance:OffshoreEnvelope>
        <Parallel/>
        <Setting><Guidance:OffshoreEnvelope.minOffshore/><Arg Name="MinOffshore"/></Setting>
    </Guidance:OffshoreEnvelope>

    <Guidance:WaterDepthEnvelope>
        <Parallel/>
        <Setting><Guidance:WaterDepthEnvelope.minWaterDepth/><Arg Name="MinWaterDepth"/></Setting>
    </Guidance:WaterDepthEnvelope>

    <Guidance:Pitch>
        <Parallel/>
        <Setting><Guidance:Pitch.massPosition/><Arg Name="MassDefault"/></Setting>
    </Guidance:Pitch>

    <Guidance:Buoyancy>
        <Parallel/>
        <Setting><Guidance:Buoyancy.position /><Arg Name="BuoyancyNeutral"/></Setting>
    </Guidance:Buoyancy>

<!-- If we're executing here or below, lets' get science data! -->

    <Insert Filename="Insert/Science.xml">
        <RedefineArg Name="PeakDetectFDOMActive"><True/></RedefineArg>
        <RedefineArg Name="TimeWindowPeakReport"><Arg Name="TimeWindowPeakRpt"/></RedefineArg>
        <RedefineArg Name="PatchTracking"><True/></RedefineArg>
        <RedefineArg Name="LowPassWindowLength"><Arg Name="LowPassWindowLen"/></RedefineArg>
        <RedefineArg Name="PeakShallowBound"><Arg Name="PeakShallowBnd"/></RedefineArg>
        <RedefineArg Name="PeakDeepBound"><Arg Name="PeakDeepBnd"/></RedefineArg>
        <RedefineArg Name="OffPeakFractionHorizontal"><Arg Name="OffPeakFraction"/></RedefineArg>
    </Insert>

    <Guidance:SetSpeed>
        <Parallel/>
        <Setting><Guidance:SetSpeed.speed/><Arg Name="Speed"/></Setting>
    </Guidance:SetSpeed>

    <Guidance:DepthEnvelope>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.minDepth/><Arg Name="YoYoMinDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="YoYoMaxDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:DepthEnvelope.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:DepthEnvelope>

    <Guidance:YoYo>
        <Parallel/>
        <Setting><Guidance:YoYo.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:YoYo.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:YoYo>

    <Aggregate Id="PatchDetectHorizontal">

        <Sequence Repeat="Repeat"/>

        <Aggregate Id="PatchDetection">

            <When>
                <Arg Name="PatchDetectOn"/>
            </When>

            <Trigger:PeakDetectHorizontal Id="PeakDetectHorizontalTrigger">
                <Sequence/>
                <Break><Arg Name="WpDone"/>
                </Break>
                <Setting><Trigger:PeakDetectHorizontal.patchTracking/><Arg Name="PatchTrackingHorizontal"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.detectFrom/><Arg Name="Science:PeakFDOM"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.depthFrom/><Arg Name="Science:PeakFDOMDepth"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.latitudeFrom/><Arg Name="Science:PeakFDOMLatitude"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.longitudeFrom/><Arg Name="Science:PeakFDOMLongitude"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.beginThreshold/><Arg Name="BeginThreshold"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.offPeakFraction/><Arg Name="OffPeakFraction"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.filterWidth/><Arg Name="FilterWidth"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.centerPeak/><Arg Name="PatchMode"/></Setting>
                <OutputArg Name="PatchFDOM"><Trigger:PeakDetectHorizontal.peakDetect/></OutputArg>
                <OutputArg Name="PatchFDOMDepth"><Trigger:PeakDetectHorizontal.peakDepth/></OutputArg>
                <OutputArg Name="PatchFDOMLatitude"><Trigger:PeakDetectHorizontal.peakLatitude/></OutputArg>
                <OutputArg Name="PatchFDOMLongitude"><Trigger:PeakDetectHorizontal.peakLongitude/></OutputArg>
                <OutputArg Name="PatchFDOMDistance"><Trigger:PeakDetectHorizontal.peakDistance/></OutputArg>
            </Trigger:PeakDetectHorizontal>

            <Syslog Severity="Important">Fell below OffPeakFraction. Patch value is <Arg Name="PatchFDOM"/><Units:part_per_billion/> at lat = <Arg Name="PatchFDOMLatitude"/><Units:degree/>, lon = <Arg Name="PatchFDOMLongitude"/><Units:degree/>, dep = <Arg Name="PatchFDOMDepth"/><Units:meter/>, distance = <Arg Name="PatchFDOMDistance"/><Units:meter/></Syslog>

            <SendData Service="Express"><Arg Name="PatchFDOM"/><Arg Name="PatchFDOMDepth"/><Arg Name="PatchFDOMLatitude"/><Arg Name="PatchFDOMLongitude"/>
            </SendData>

            <Assign Id="AssignPatchDetectOff"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

        </Aggregate>

        <Assign Id="AssignPatchDetectOn"><Sequence/><Arg Name="PatchDetectOn"/><True/></Assign>

        <Syslog Severity="Important">Next: bearing for CrossLeg: <Arg Name="WpBearing"/><Units:degree/>. WpMaxDistance = <Arg Name="WpMaxDistance"/><Units:meter/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>.</Syslog>

        <Aggregate Id="CrossLeg">

            <Description>
                This is a long leg across the width of the patch. Also the first
                leg in a mission run. Two waypoints run in parallel: a short run
                to the surfacing point, and a longer run to the edge of the
                patch.
            </Description>

            <Sequence/>

            <Break><Arg Name="WpDone"/>
                <Or><Arg Name="PatchDetectOn"/><Eq><False/></Eq></Or>
            </Break>

            <Guidance:Waypoint Id="CrossSurfaceWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="PatchFDOMDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Call RefId="SurfaceComms"/>

            <Guidance:Waypoint Id="CrossPeakWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="WpMaxDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Syslog Severity="Important">CrossPeakWp done. Lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchFDOM"/><Units:part_per_billion/> at lat = <Arg Name="PatchFDOMLatitude"/><Units:degree/>, lon = <Arg Name="PatchFDOMLongitude"/><Units:degree/>, dep = <Arg Name="PatchFDOMDepth"/><Units:meter/>, distance = <Arg Name="PatchFDOMDistance"/><Units:meter/></Syslog>

            <Assign Id="AssignPatchDetectOffInCrossLeg"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

            <Assign Id="AssignWpDoneInCrossLeg"><Sequence/><Arg Name="WpDone"/><True/></Assign>

        </Aggregate>

        <Assign Id="AssignWpBearingForInLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Add><Arg Name="Reverse"/></Add><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

        <Syslog Severity="Important">Next: bearing for InLeg: <Arg Name="WpBearing"/><Units:degree/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchFDOM"/><Units:part_per_billion/> at lat = <Arg Name="PatchFDOMLatitude"/><Units:degree/>, lon = <Arg Name="PatchFDOMLongitude"/><Units:degree/>, dep = <Arg Name="PatchFDOMDepth"/><Units:meter/>, distance = <Arg Name="PatchFDOMDistance"/><Units:meter/></Syslog>

        <Guidance:Waypoint Id="InLegWp">
            <Description>
                Simply drive back towards the patch center
            </Description>
            <Sequence/>
            <Timeout Duration="WpTimeout"/>
            <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="PatchFDOMDistance"/></Setting>
            <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
            <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
        </Guidance:Waypoint>

        <Assign Id="AssignWpBearingForOutLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Sub><Arg Name="Turn"/></Sub><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

        <Syslog Severity="Important">Next: bearing for OutLeg: <Arg Name="WpBearing"/><Units:degree/>. WpMaxDistance = <Arg Name="WpMaxDistance"/><Units:meter/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchFDOM"/><Units:part_per_billion/> at lat = <Arg Name="PatchFDOMLatitude"/><Units:degree/>, lon = <Arg Name="PatchFDOMLongitude"/><Units:degree/>, dep = <Arg Name="PatchFDOMDepth"/><Units:meter/>, distance = <Arg Name="PatchFDOMDistance"/><Units:meter/></Syslog>

        <Call RefId="SurfaceCommsSplit"/>

        <Assign Id="AssignPatchDetectOnForOutLeg"><Sequence/><Arg Name="PatchDetectOn"/><True/></Assign>

        <Aggregate Id="OutLeg">

            <Description>
                Drive outward until edge of patch is detected.
            </Description>

            <Sequence/>

            <Break><Arg Name="WpDone"/>
                <Or><Arg Name="PatchDetectOn"/><Eq><False/></Eq></Or>
            </Break>

            <Guidance:Waypoint Id="OutLegWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="WpMaxDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Assign Id="AssignPatchDetectOffInOutLeg"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

            <Assign Id="AssignWpDoneInOutLeg"><Sequence/><Arg Name="WpDone"/><True/></Assign>

        </Aggregate>

        <Assign Id="AssignWpBearingForCrossLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Add><Arg Name="Reverse"/></Add><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

    </Aggregate>

</Mission>


2018-09-26T19:26:00.203Z,1537989960.203 [CommandLine](IMPORTANT): Loaded ./Missions/Science/trackPatchFDOM.xml
2018-09-26T19:26:11.903Z,1537989971.903 [CommandLine](IMPORTANT): got command set trackPatchFDOM.MaxDepth 15.000000 meter
2018-09-26T19:26:11.921Z,1537989971.921 [CommandLine](IMPORTANT): got command set trackPatchFDOM.MinOffshore 1000.000000 meter
2018-09-26T19:26:11.923Z,1537989971.923 [CommandLine](IMPORTANT): got command set trackPatchFDOM.NeedCommsTime 20.000000 minute
2018-09-26T19:26:11.924Z,1537989971.924 [CommandLine](IMPORTANT): got command set trackPatchFDOM.MissionTimeout 3.000000 hour
2018-09-26T19:26:26.512Z,1537989986.512 [CommandLine](IMPORTANT): got command set trackPatchFDOM.YoYoMinDepth 0.300000 meter
2018-09-26T19:26:26.513Z,1537989986.513 [CommandLine](IMPORTANT): got command set trackPatchFDOM.YoYoMaxDepth 3.500000 meter
2018-09-26T19:26:26.514Z,1537989986.514 [CommandLine](IMPORTANT): got command set trackPatchFDOM.WpMaxDistance 200.000000 meter
2018-09-26T19:26:26.515Z,1537989986.515 [CommandLine](IMPORTANT): got command set trackPatchFDOM.WpTimeout 10.000000 minute
2018-09-26T19:26:26.515Z,1537989986.515 [CommandLine](IMPORTANT): got command set trackPatchFDOM.PeakShallowBnd 0.300000 meter
2018-09-26T19:26:29.433Z,1537989989.433 [CommandLine](IMPORTANT): got command set trackPatchFDOM.PeakDeepBnd 3.500000 meter
2018-09-26T19:26:29.433Z,1537989989.433 [CommandLine](IMPORTANT): got command run 
2018-09-26T19:26:29.435Z,1537989989.435 [CommandLine](IMPORTANT): Running 
2018-09-26T19:26:29.596Z,1537989989.596 [Default] Stopped
2018-09-26T19:26:29.596Z,1537989989.596 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-26T19:26:29.596Z,1537989989.596 [Default:B.GoToSurface] Stopped
2018-09-26T19:26:29.596Z,1537989989.596 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-26T19:26:29.596Z,1537989989.596 [Default:CheckIn] Stopped
2018-09-26T19:26:29.596Z,1537989989.596 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-26T19:26:29.596Z,1537989989.596 [Default:CheckIn:C.Wait] Stopped
2018-09-26T19:26:29.596Z,1537989989.596 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-26T19:26:29.597Z,1537989989.597 [MissionManager](IMPORTANT): Started mission trackPatchFDOM
2018-09-26T19:26:29.597Z,1537989989.597 [trackPatchFDOM] Running Loop=1
2018-09-26T19:26:29.597Z,1537989989.597 [trackPatchFDOM](DEBUG): Aggregate::initialize trackPatchFDOM
2018-09-26T19:26:29.597Z,1537989989.597 [trackPatchFDOM:A.AltitudeEnvelope] Running Loop=1
2018-09-26T19:26:29.597Z,1537989989.597 [trackPatchFDOM:A.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-26T19:26:29.597Z,1537989989.597 [trackPatchFDOM:B.DepthEnvelope] Running Loop=1
2018-09-26T19:26:29.598Z,1537989989.598 [trackPatchFDOM:B.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-26T19:26:29.598Z,1537989989.598 [trackPatchFDOM:F.OffshoreEnvelope] Running Loop=1
2018-09-26T19:26:29.598Z,1537989989.598 [trackPatchFDOM:F.OffshoreEnvelope](DEBUG): Initialize OffshoreEnvelopeComponent.
2018-09-26T19:26:29.598Z,1537989989.598 [trackPatchFDOM:G.WaterDepthEnvelope] Running Loop=1
2018-09-26T19:26:29.598Z,1537989989.598 [trackPatchFDOM:G.WaterDepthEnvelope](DEBUG): Initialize WaterDepthEnvelopeComponent.
2018-09-26T19:26:29.598Z,1537989989.598 [trackPatchFDOM:H.Pitch] Running Loop=1
2018-09-26T19:26:29.598Z,1537989989.598 [trackPatchFDOM:H.Pitch](DEBUG): Initialize.
2018-09-26T19:26:29.598Z,1537989989.598 [trackPatchFDOM:I.Buoyancy] Running Loop=1
2018-09-26T19:26:29.598Z,1537989989.598 [trackPatchFDOM:I.Buoyancy](DEBUG): Initialize Buoyancy Component.
2018-09-26T19:26:29.599Z,1537989989.599 [trackPatchFDOM:Science] Running Loop=1
2018-09-26T19:26:29.599Z,1537989989.599 [trackPatchFDOM:Science](DEBUG): Aggregate::initialize trackPatchFDOM:Science
2018-09-26T19:26:29.599Z,1537989989.599 [trackPatchFDOM:Science:A] Running Loop=1
2018-09-26T19:26:29.599Z,1537989989.599 [trackPatchFDOM:Science:B] Running Loop=1
2018-09-26T19:26:29.599Z,1537989989.599 [trackPatchFDOM:Science:C] Running Loop=1
2018-09-26T19:26:29.599Z,1537989989.599 [trackPatchFDOM:Science:D] Running Loop=1
2018-09-26T19:26:29.599Z,1537989989.599 [trackPatchFDOM:Science:E] Running Loop=1
2018-09-26T19:26:29.599Z,1537989989.599 [trackPatchFDOM:Science:F] Running Loop=1
2018-09-26T19:26:29.599Z,1537989989.599 [trackPatchFDOM:Science:G] Running Loop=1
2018-09-26T19:26:29.599Z,1537989989.599 [trackPatchFDOM:Science:Read_Oil] Running Loop=1
2018-09-26T19:26:29.599Z,1537989989.599 [trackPatchFDOM:Science:PeakDetectChl] Running Loop=1
2018-09-26T19:26:29.600Z,1537989989.600 [trackPatchFDOM:Science:PeakDetectChl](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectChl
2018-09-26T19:26:29.600Z,1537989989.600 [trackPatchFDOM:Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:26:29.600Z,1537989989.600 [trackPatchFDOM:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:26:29.601Z,1537989989.601 [trackPatchFDOM:Science:HighestChlPeakReport] Running Loop=1
2018-09-26T19:26:29.601Z,1537989989.601 [trackPatchFDOM:Science:HighestChlPeakReport](DEBUG): Aggregate::initialize trackPatchFDOM:Science:HighestChlPeakReport
2018-09-26T19:26:29.601Z,1537989989.601 [trackPatchFDOM:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2018-09-26T19:26:29.602Z,1537989989.602 [trackPatchFDOM:Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2018-09-26T19:26:29.602Z,1537989989.602 [trackPatchFDOM:Science:PeakDetectNO3] Running Loop=1
2018-09-26T19:26:29.602Z,1537989989.602 [trackPatchFDOM:Science:PeakDetectNO3](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectNO3
2018-09-26T19:26:29.602Z,1537989989.602 [trackPatchFDOM:Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:26:29.602Z,1537989989.602 [trackPatchFDOM:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:26:29.604Z,1537989989.604 [trackPatchFDOM:Science:PeakDetectOil] Running Loop=1
2018-09-26T19:26:29.604Z,1537989989.604 [trackPatchFDOM:Science:PeakDetectOil](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectOil
2018-09-26T19:26:29.604Z,1537989989.604 [trackPatchFDOM:Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:26:29.604Z,1537989989.604 [trackPatchFDOM:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:26:29.605Z,1537989989.605 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:26:29.605Z,1537989989.605 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:26:29.605Z,1537989989.605 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:26:29.605Z,1537989989.605 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:26:29.607Z,1537989989.607 [trackPatchFDOM:K.SetSpeed] Running Loop=1
2018-09-26T19:26:29.607Z,1537989989.607 [trackPatchFDOM:K.SetSpeed](DEBUG): Initialize.
2018-09-26T19:26:29.607Z,1537989989.607 [trackPatchFDOM:L.DepthEnvelope] Running Loop=1
2018-09-26T19:26:29.607Z,1537989989.607 [trackPatchFDOM:L.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-26T19:26:29.607Z,1537989989.607 [trackPatchFDOM:M.YoYo] Running Loop=1
2018-09-26T19:26:29.607Z,1537989989.607 [trackPatchFDOM:M.YoYo](DEBUG): Initialize YoYoComponent.
2018-09-26T19:26:29.608Z,1537989989.608 [trackPatchFDOM:SurfaceCommsSplit] Running Loop=1
2018-09-26T19:26:29.608Z,1537989989.608 [trackPatchFDOM:SurfaceCommsSplit](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceCommsSplit
2018-09-26T19:26:29.608Z,1537989989.608 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface] Running Loop=1
2018-09-26T19:26:29.608Z,1537989989.608 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-26T19:26:29.608Z,1537989989.608 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-26T19:26:29.610Z,1537989989.610 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-26T19:26:29.611Z,1537989989.611 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-26T19:26:29.611Z,1537989989.611 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-26T19:26:29.611Z,1537989989.611 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-26T19:26:29.612Z,1537989989.612 [trackPatchFDOM:M.YoYo] Running Loop=1
2018-09-26T19:26:29.614Z,1537989989.614 [trackPatchFDOM:L.DepthEnvelope] Running Loop=1
2018-09-26T19:26:29.615Z,1537989989.615 [trackPatchFDOM:K.SetSpeed] Running Loop=1
2018-09-26T19:26:29.616Z,1537989989.616 [trackPatchFDOM:Science] Running Loop=1
2018-09-26T19:26:29.649Z,1537989989.649 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:26:29.650Z,1537989989.650 [trackPatchFDOM:Science:PeakDetectOil] Stopped
2018-09-26T19:26:29.650Z,1537989989.650 [trackPatchFDOM:Science:PeakDetectOil](DEBUG): Aggregate::uninitialize trackPatchFDOM:Science:PeakDetectOil
2018-09-26T19:26:29.650Z,1537989989.650 [trackPatchFDOM:Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2018-09-26T19:26:29.650Z,1537989989.650 [trackPatchFDOM:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:26:29.650Z,1537989989.650 [trackPatchFDOM:Science:PeakDetectNO3] Stopped
2018-09-26T19:26:29.650Z,1537989989.650 [trackPatchFDOM:Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize trackPatchFDOM:Science:PeakDetectNO3
2018-09-26T19:26:29.650Z,1537989989.650 [trackPatchFDOM:Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2018-09-26T19:26:29.650Z,1537989989.650 [trackPatchFDOM:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:26:29.650Z,1537989989.650 [trackPatchFDOM:Science:HighestChlPeakReport] Stopped
2018-09-26T19:26:29.651Z,1537989989.651 [trackPatchFDOM:Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize trackPatchFDOM:Science:HighestChlPeakReport
2018-09-26T19:26:29.651Z,1537989989.651 [trackPatchFDOM:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2018-09-26T19:26:29.651Z,1537989989.651 [trackPatchFDOM:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-26T19:26:29.651Z,1537989989.651 [trackPatchFDOM:Science:PeakDetectChl] Stopped
2018-09-26T19:26:29.651Z,1537989989.651 [trackPatchFDOM:Science:PeakDetectChl](DEBUG): Aggregate::uninitialize trackPatchFDOM:Science:PeakDetectChl
2018-09-26T19:26:29.651Z,1537989989.651 [trackPatchFDOM:Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2018-09-26T19:26:29.651Z,1537989989.651 [trackPatchFDOM:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:26:29.651Z,1537989989.651 [trackPatchFDOM:Science:Read_Oil] Running Loop=1
2018-09-26T19:26:29.652Z,1537989989.652 [trackPatchFDOM:Science:Read_Oil](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-26T19:26:29.665Z,1537989989.665 [trackPatchFDOM:Science:G] Stopped
2018-09-26T19:26:29.665Z,1537989989.665 [trackPatchFDOM:Science:F] Stopped
2018-09-26T19:26:29.665Z,1537989989.665 [trackPatchFDOM:Science:E] Stopped
2018-09-26T19:26:29.665Z,1537989989.665 [trackPatchFDOM:Science:D] Stopped
2018-09-26T19:26:29.665Z,1537989989.665 [trackPatchFDOM:Science:C] Running Loop=1
2018-09-26T19:26:29.666Z,1537989989.666 [trackPatchFDOM:Science:C](DEBUG): Initialize ReadDataComponent to sense sea_water_temperature
2018-09-26T19:26:29.666Z,1537989989.666 [trackPatchFDOM:Science:C](DEBUG): Initialize ReadDataComponent to sense sea_water_salinity
2018-09-26T19:26:29.667Z,1537989989.667 [trackPatchFDOM:Science:B] Stopped
2018-09-26T19:26:29.667Z,1537989989.667 [trackPatchFDOM:Science:A] Running Loop=1
2018-09-26T19:26:29.668Z,1537989989.668 [trackPatchFDOM:Science:A](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_oxygen_in_sea_water
2018-09-26T19:26:29.669Z,1537989989.669 [trackPatchFDOM:I.Buoyancy] Running Loop=1
2018-09-26T19:26:29.670Z,1537989989.670 [trackPatchFDOM:H.Pitch] Running Loop=1
2018-09-26T19:26:29.671Z,1537989989.671 [trackPatchFDOM:G.WaterDepthEnvelope] Running Loop=1
2018-09-26T19:26:29.672Z,1537989989.672 [trackPatchFDOM:F.OffshoreEnvelope] Running Loop=1
2018-09-26T19:26:29.678Z,1537989989.678 [trackPatchFDOM:SurfaceCommsSplit:B] Running Loop=1
2018-09-26T19:26:29.678Z,1537989989.678 [trackPatchFDOM:SurfaceCommsSplit:B](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceCommsSplit:B
2018-09-26T19:26:29.679Z,1537989989.679 [trackPatchFDOM:SurfaceCommsSplit:B:A] Running Loop=1
2018-09-26T19:26:29.679Z,1537989989.679 [trackPatchFDOM:B.DepthEnvelope] Running Loop=1
2018-09-26T19:26:29.680Z,1537989989.680 [trackPatchFDOM:A.AltitudeEnvelope] Running Loop=1
2018-09-26T19:26:29.741Z,1537989989.741 [CTD_NeilBrown](INFO): Opening uart, block timeout 10ths=4
2018-09-26T19:26:29.869Z,1537989989.869 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:26:30.049Z,1537989990.049 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-26T19:26:30.049Z,1537989990.049 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-26T19:26:30.281Z,1537989990.281 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:26:30.689Z,1537989990.689 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:26:31.097Z,1537989991.097 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:26:31.841Z,1537989991.841 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:26:32.897Z,1537989992.897 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:26:33.708Z,1537989993.708 [trackPatchFDOM:SurfaceCommsSplit:B:A](INFO): ##UnpackSplit##
2018-09-26T19:26:33.713Z,1537989993.713 [trackPatchFDOM:SurfaceCommsSplit:B:A] Stopped
2018-09-26T19:26:33.713Z,1537989993.713 [trackPatchFDOM:SurfaceCommsSplit:B](INFO): Completed trackPatchFDOM:SurfaceCommsSplit:B
2018-09-26T19:26:33.713Z,1537989993.713 [trackPatchFDOM:SurfaceCommsSplit:B] Stopped
2018-09-26T19:26:33.713Z,1537989993.713 [trackPatchFDOM:SurfaceCommsSplit:B](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceCommsSplit:B
2018-09-26T19:26:33.713Z,1537989993.713 [trackPatchFDOM:SurfaceCommsSplit:C] Running Loop=1
2018-09-26T19:26:33.714Z,1537989993.714 [trackPatchFDOM:SurfaceCommsSplit:C](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceCommsSplit:C
2018-09-26T19:26:33.714Z,1537989993.714 [trackPatchFDOM:SurfaceCommsSplit:C:A] Running Loop=1
2018-09-26T19:26:33.857Z,1537989993.857 [trackPatchFDOM:M.YoYo] Preempted
2018-09-26T19:26:33.857Z,1537989993.857 [trackPatchFDOM:L.DepthEnvelope] Preempted
2018-09-26T19:26:33.857Z,1537989993.857 [trackPatchFDOM:K.SetSpeed] Preempted
2018-09-26T19:26:33.857Z,1537989993.857 [trackPatchFDOM:Science] Preempted
2018-09-26T19:26:33.858Z,1537989993.858 [trackPatchFDOM:Science:A] Preempted
2018-09-26T19:26:33.858Z,1537989993.858 [trackPatchFDOM:Science:C] Preempted
2018-09-26T19:26:33.858Z,1537989993.858 [trackPatchFDOM:Science:Read_Oil] Preempted
2018-09-26T19:26:33.858Z,1537989993.858 [trackPatchFDOM:Science:PeakDetectFDOM] Preempted
2018-09-26T19:26:33.858Z,1537989993.858 [trackPatchFDOM:I.Buoyancy] Preempted
2018-09-26T19:26:33.858Z,1537989993.858 [trackPatchFDOM:H.Pitch] Preempted
2018-09-26T19:26:33.858Z,1537989993.858 [trackPatchFDOM:G.WaterDepthEnvelope] Preempted
2018-09-26T19:26:33.858Z,1537989993.858 [trackPatchFDOM:F.OffshoreEnvelope] Preempted
2018-09-26T19:26:33.862Z,1537989993.862 [trackPatchFDOM:SurfaceCommsSplit:C:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-26T19:26:34.181Z,1537989994.181 [NAL9602](INFO): Powering up
2018-09-26T19:26:34.233Z,1537989994.233 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-26T19:26:37.067Z,1537989997.067 [Aanderaa_O2](INFO): Powering down
2018-09-26T19:26:45.366Z,1537990005.366 [NAL9602](INFO): NAL9602 initialized
2018-09-26T19:27:01.776Z,1537990021.776 [NAL9602](INFO): SBD MO Status=0, MOMSN=1729, MT Status=0, MTMSN=0
2018-09-26T19:27:01.776Z,1537990021.776 [NAL9602](INFO): No messages in MT queue
2018-09-26T19:27:44.150Z,1537990064.150 [DataOverHttps](IMPORTANT): SBD MTMSN=20180926T192744
2018-09-26T19:27:48.312Z,1537990068.312 [DataOverHttps](INFO): Received command:report t trackPatchFDOM:Science.PeakFDOM
2018-09-26T19:27:49.881Z,1537990069.881 [CommandLine](IMPORTANT): got command report touch trackPatchFDOM:Science.PeakFDOM
2018-09-26T19:29:27.969Z,1537990167.969 [CommandLine](IMPORTANT): got command show stack
2018-09-26T19:29:27.969Z,1537990167.969 [CommandLine](IMPORTANT): Behavior Stack:

2018-09-26T19:29:27.969Z,1537990167.969 [trackPatchFDOM](IMPORTANT): Priority 0: trackPatchFDOM:A.AltitudeEnvelope
2018-09-26T19:29:27.970Z,1537990167.970 [trackPatchFDOM](IMPORTANT): Priority 1: trackPatchFDOM:B.DepthEnvelope
2018-09-26T19:29:27.970Z,1537990167.970 [trackPatchFDOM:SurfaceCommsSplit](IMPORTANT): Priority 2: trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface
2018-09-26T19:29:27.970Z,1537990167.970 [trackPatchFDOM:SurfaceCommsSplit:C](IMPORTANT): Priority 3: trackPatchFDOM:SurfaceCommsSplit:C:A
2018-09-26T19:30:27.327Z,1537990227.327 [CommandLine](IMPORTANT): got command failComponent
2018-09-26T19:30:27.327Z,1537990227.327 [CommandLine](IMPORTANT): Failed components:
2018-09-26T19:30:27.327Z,1537990227.327 [CommandLine](IMPORTANT): No failed Components.
2018-09-26T19:31:21.196Z,1537990281.196 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,   -93,  -176,    -3,   +13,A
2018-09-26T19:31:55.581Z,1537990315.581 [NAL9602](INFO): GPS fix at 20180926T193155: (36.812530, -121.822872)
2018-09-26T19:31:55.638Z,1537990315.638 [trackPatchFDOM:SurfaceCommsSplit:C:A] Stopped
2018-09-26T19:31:55.639Z,1537990315.639 [trackPatchFDOM:SurfaceCommsSplit:C:B] Running Loop=1
2018-09-26T19:31:56.044Z,1537990316.044 [trackPatchFDOM:SurfaceCommsSplit:C:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-26T19:32:00.592Z,1537990320.592 [DataOverHttps](INFO): Sending 62 bytes from file Logs/20180926T190706/Courier0012.lzma
2018-09-26T19:32:01.353Z,1537990321.353 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Courier0012.lzma.bak
2018-09-26T19:32:01.354Z,1537990321.354 [DataOverHttps](INFO): SBD MOMSN=8601453
2018-09-26T19:32:10.839Z,1537990330.839 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180926T190706/Courier0015.lzma
2018-09-26T19:32:11.638Z,1537990331.638 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Courier0015.lzma.bak
2018-09-26T19:32:11.638Z,1537990331.638 [DataOverHttps](INFO): SBD MOMSN=8601456
2018-09-26T19:32:21.100Z,1537990341.100 [DataOverHttps](INFO): Sending 881 bytes from file Logs/20180926T190706/Express0013.lzma
2018-09-26T19:32:21.686Z,1537990341.686 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Express0013.lzma.bak
2018-09-26T19:32:21.686Z,1537990341.686 [DataOverHttps](INFO): SBD MOMSN=8601458
2018-09-26T19:32:27.014Z,1537990347.014 [NAL9602](INFO): Powering down
2018-09-26T19:32:30.930Z,1537990350.930 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180926T190706/Express0016.lzma
2018-09-26T19:32:31.658Z,1537990351.658 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Express0016.lzma.bak
2018-09-26T19:32:31.658Z,1537990351.658 [DataOverHttps](INFO): SBD MOMSN=8601498
2018-09-26T19:32:32.352Z,1537990352.352 [trackPatchFDOM:SurfaceCommsSplit:C:B] Stopped
2018-09-26T19:32:32.352Z,1537990352.352 [trackPatchFDOM:SurfaceCommsSplit:C:C] Running Loop=1
2018-09-26T19:32:32.513Z,1537990352.513 [trackPatchFDOM:SurfaceCommsSplit:C:C](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-26T19:32:35.762Z,1537990355.762 [NAL9602](INFO): Powering up
2018-09-26T19:32:46.710Z,1537990366.710 [NAL9602](INFO): NAL9602 initialized
2018-09-26T19:33:00.323Z,1537990380.323 [NAL9602](INFO): SBD MO Status=0, MOMSN=1730, MT Status=0, MTMSN=0
2018-09-26T19:33:00.324Z,1537990380.324 [NAL9602](INFO): No messages in MT queue
2018-09-26T19:33:56.126Z,1537990436.126 [NAL9602](INFO): GPS fix at 20180926T193355: (36.812644, -121.822952)
2018-09-26T19:33:56.199Z,1537990436.199 [trackPatchFDOM:SurfaceCommsSplit:C:C] Stopped
2018-09-26T19:33:56.200Z,1537990436.200 [trackPatchFDOM:SurfaceCommsSplit:C](INFO): Completed trackPatchFDOM:SurfaceCommsSplit:C
2018-09-26T19:33:56.200Z,1537990436.200 [trackPatchFDOM:SurfaceCommsSplit:C] Stopped
2018-09-26T19:33:56.200Z,1537990436.200 [trackPatchFDOM:SurfaceCommsSplit:C](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceCommsSplit:C
2018-09-26T19:33:56.201Z,1537990436.201 [trackPatchFDOM:SurfaceCommsSplit](INFO): Completed trackPatchFDOM:SurfaceCommsSplit
2018-09-26T19:33:56.201Z,1537990436.201 [trackPatchFDOM:SurfaceCommsSplit] Stopped
2018-09-26T19:33:56.201Z,1537990436.201 [trackPatchFDOM:SurfaceCommsSplit](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceCommsSplit
2018-09-26T19:33:56.201Z,1537990436.201 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface] Stopped
2018-09-26T19:33:56.202Z,1537990436.202 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-26T19:33:56.202Z,1537990436.202 [trackPatchFDOM:PatchDetectHorizontal] Running Loop=1
2018-09-26T19:33:56.202Z,1537990436.202 [trackPatchFDOM:PatchDetectHorizontal](DEBUG): Aggregate::initialize trackPatchFDOM:PatchDetectHorizontal
2018-09-26T19:33:56.202Z,1537990436.202 [trackPatchFDOM:PatchDetectHorizontal:AssignPatchDetectOn] Running Loop=1
2018-09-26T19:33:56.601Z,1537990436.601 [trackPatchFDOM:PatchDetectHorizontal:AssignPatchDetectOn] Stopped
2018-09-26T19:33:56.601Z,1537990436.601 [trackPatchFDOM:PatchDetectHorizontal:C] Running Loop=1
2018-09-26T19:33:56.601Z,1537990436.601 [trackPatchFDOM:M.YoYo] Running Loop=1
2018-09-26T19:33:56.602Z,1537990436.602 [trackPatchFDOM:L.DepthEnvelope] Running Loop=1
2018-09-26T19:33:56.603Z,1537990436.603 [trackPatchFDOM:K.SetSpeed] Running Loop=1
2018-09-26T19:33:56.603Z,1537990436.603 [trackPatchFDOM:Science] Running Loop=1
2018-09-26T19:33:56.609Z,1537990436.609 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:33:56.610Z,1537990436.610 [trackPatchFDOM:Science:Read_Oil] Running Loop=1
2018-09-26T19:33:56.610Z,1537990436.610 [trackPatchFDOM:Science:C] Running Loop=1
2018-09-26T19:33:56.610Z,1537990436.610 [trackPatchFDOM:Science:A] Running Loop=1
2018-09-26T19:33:56.610Z,1537990436.610 [trackPatchFDOM:I.Buoyancy] Running Loop=1
2018-09-26T19:33:56.611Z,1537990436.611 [trackPatchFDOM:H.Pitch] Running Loop=1
2018-09-26T19:33:56.611Z,1537990436.611 [trackPatchFDOM:G.WaterDepthEnvelope] Running Loop=1
2018-09-26T19:33:56.612Z,1537990436.612 [trackPatchFDOM:F.OffshoreEnvelope] Running Loop=1
2018-09-26T19:33:56.621Z,1537990436.621 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-26T19:33:56.621Z,1537990436.621 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-26T19:33:56.725Z,1537990436.725 [CTD_NeilBrown](INFO): Opening uart, block timeout 10ths=4
2018-09-26T19:33:56.849Z,1537990436.849 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:33:57.002Z,1537990437.002 [trackPatchFDOM:PatchDetectHorizontal:C](IMPORTANT): Next: bearing for CrossLeg: -90.000000 arcdeg . WpMaxDistance = 200.000000 m . Current lat, lon = 36.812644 arcdeg , -121.822952 arcdeg .
2018-09-26T19:33:57.003Z,1537990437.003 [trackPatchFDOM:PatchDetectHorizontal:C] Stopped
2018-09-26T19:33:57.004Z,1537990437.004 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg] Running Loop=1
2018-09-26T19:33:57.004Z,1537990437.004 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg](DEBUG): Aggregate::initialize trackPatchFDOM:PatchDetectHorizontal:CrossLeg
2018-09-26T19:33:57.004Z,1537990437.004 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint] Running Loop=1
2018-09-26T19:33:57.004Z,1537990437.004 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-26T19:33:57.009Z,1537990437.009 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection] Running Loop=1
2018-09-26T19:33:57.010Z,1537990437.010 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection](DEBUG): Aggregate::initialize trackPatchFDOM:PatchDetectHorizontal:PatchDetection
2018-09-26T19:33:57.010Z,1537990437.010 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal] Running Loop=1
2018-09-26T19:33:57.010Z,1537990437.010 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](INFO): Initialize.
2018-09-26T19:33:57.257Z,1537990437.257 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:33:57.385Z,1537990437.385 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint] Stopped
2018-09-26T19:33:57.386Z,1537990437.386 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-26T19:33:57.386Z,1537990437.386 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:B] Running Loop=1
2018-09-26T19:33:57.386Z,1537990437.386 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:B](DEBUG): Aggregate::initialize trackPatchFDOM:PatchDetectHorizontal:CrossLeg:B
2018-09-26T19:33:57.665Z,1537990437.665 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:33:57.817Z,1537990437.817 [trackPatchFDOM:SurfaceComms] Running Loop=1
2018-09-26T19:33:57.817Z,1537990437.817 [trackPatchFDOM:SurfaceComms](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceComms
2018-09-26T19:33:57.817Z,1537990437.817 [trackPatchFDOM:SurfaceComms:SurfaceComms] Running Loop=1
2018-09-26T19:33:57.818Z,1537990437.818 [trackPatchFDOM:SurfaceComms:SurfaceComms](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceComms:SurfaceComms
2018-09-26T19:33:57.818Z,1537990437.818 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface] Running Loop=1
2018-09-26T19:33:57.818Z,1537990437.818 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-26T19:33:57.818Z,1537990437.818 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-26T19:33:57.819Z,1537990437.819 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-26T19:33:57.819Z,1537990437.819 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-26T19:33:57.819Z,1537990437.819 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-26T19:33:57.820Z,1537990437.820 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-26T19:33:57.846Z,1537990437.846 [trackPatchFDOM:SurfaceComms:SurfaceComms:B] Running Loop=1
2018-09-26T19:33:57.846Z,1537990437.846 [trackPatchFDOM:SurfaceComms:SurfaceComms:B](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceComms:SurfaceComms:B
2018-09-26T19:33:57.846Z,1537990437.846 [trackPatchFDOM:SurfaceComms:SurfaceComms:B:A] Running Loop=1
2018-09-26T19:33:58.077Z,1537990438.077 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:33:58.227Z,1537990438.227 [trackPatchFDOM:SurfaceComms:SurfaceComms:B] Stopped
2018-09-26T19:33:58.227Z,1537990438.227 [trackPatchFDOM:SurfaceComms:SurfaceComms:B](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceComms:SurfaceComms:B
2018-09-26T19:33:58.227Z,1537990438.227 [trackPatchFDOM:SurfaceComms:SurfaceComms:B:A] Stopped
2018-09-26T19:33:58.227Z,1537990438.227 [trackPatchFDOM:SurfaceComms:SurfaceComms:C] Running Loop=1
2018-09-26T19:33:58.227Z,1537990438.227 [trackPatchFDOM:SurfaceComms:SurfaceComms:C](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceComms:SurfaceComms:C
2018-09-26T19:33:58.228Z,1537990438.228 [trackPatchFDOM:SurfaceComms:SurfaceComms:C:A] Running Loop=1
2018-09-26T19:33:58.654Z,1537990438.654 [trackPatchFDOM:M.YoYo] Preempted
2018-09-26T19:33:58.654Z,1537990438.654 [trackPatchFDOM:L.DepthEnvelope] Preempted
2018-09-26T19:33:58.654Z,1537990438.654 [trackPatchFDOM:K.SetSpeed] Preempted
2018-09-26T19:33:58.654Z,1537990438.654 [trackPatchFDOM:Science] Preempted
2018-09-26T19:33:58.655Z,1537990438.655 [trackPatchFDOM:Science:A] Preempted
2018-09-26T19:33:58.655Z,1537990438.655 [trackPatchFDOM:Science:C] Preempted
2018-09-26T19:33:58.655Z,1537990438.655 [trackPatchFDOM:Science:Read_Oil] Preempted
2018-09-26T19:33:58.655Z,1537990438.655 [trackPatchFDOM:Science:PeakDetectFDOM] Preempted
2018-09-26T19:33:58.655Z,1537990438.655 [trackPatchFDOM:I.Buoyancy] Preempted
2018-09-26T19:33:58.655Z,1537990438.655 [trackPatchFDOM:H.Pitch] Preempted
2018-09-26T19:33:58.655Z,1537990438.655 [trackPatchFDOM:G.WaterDepthEnvelope] Preempted
2018-09-26T19:33:58.655Z,1537990438.655 [trackPatchFDOM:F.OffshoreEnvelope] Preempted
2018-09-26T19:33:58.658Z,1537990438.658 [trackPatchFDOM:SurfaceComms:SurfaceComms:C:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-26T19:33:58.785Z,1537990438.785 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-26T19:34:00.191Z,1537990440.191 [NAL9602](INFO): GPS fix at 20180926T193359: (36.812661, -121.822955)
2018-09-26T19:34:00.261Z,1537990440.261 [trackPatchFDOM:SurfaceComms:SurfaceComms:C:A] Stopped
2018-09-26T19:34:00.262Z,1537990440.262 [trackPatchFDOM:SurfaceComms:SurfaceComms:C:B] Running Loop=1
2018-09-26T19:34:00.677Z,1537990440.677 [Aanderaa_O2](INFO): Powering down
2018-09-26T19:34:00.762Z,1537990440.762 [trackPatchFDOM:SurfaceComms:SurfaceComms:C:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-26T19:34:04.891Z,1537990444.891 [DataOverHttps](INFO): Sending 63 bytes from file Logs/20180926T190706/Courier0018.lzma
2018-09-26T19:34:05.671Z,1537990445.671 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Courier0018.lzma.bak
2018-09-26T19:34:05.671Z,1537990445.671 [DataOverHttps](INFO): SBD MOMSN=8601500
2018-09-26T19:34:14.692Z,1537990454.692 [DataOverHttps](INFO): Sending 226 bytes from file Logs/20180926T190706/Express0019.lzma
2018-09-26T19:34:15.454Z,1537990455.454 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Express0019.lzma.bak
2018-09-26T19:34:15.454Z,1537990455.454 [DataOverHttps](INFO): SBD MOMSN=8601504
2018-09-26T19:34:16.255Z,1537990456.255 [trackPatchFDOM:SurfaceComms:SurfaceComms:C:B] Stopped
2018-09-26T19:34:16.255Z,1537990456.255 [trackPatchFDOM:SurfaceComms:SurfaceComms:C:C] Running Loop=1
2018-09-26T19:34:16.394Z,1537990456.394 [trackPatchFDOM:SurfaceComms:SurfaceComms:C:C](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-26T19:34:20.599Z,1537990460.599 [NAL9602](INFO): GPS fix at 20180926T193419: (36.812638, -121.822969)
2018-09-26T19:34:20.640Z,1537990460.640 [trackPatchFDOM:SurfaceComms:SurfaceComms:C:C] Stopped
2018-09-26T19:34:20.640Z,1537990460.640 [trackPatchFDOM:SurfaceComms:SurfaceComms:C](INFO): Completed trackPatchFDOM:SurfaceComms:SurfaceComms:C
2018-09-26T19:34:20.640Z,1537990460.640 [trackPatchFDOM:SurfaceComms:SurfaceComms:C] Stopped
2018-09-26T19:34:20.640Z,1537990460.640 [trackPatchFDOM:SurfaceComms:SurfaceComms:C](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceComms:SurfaceComms:C
2018-09-26T19:34:20.642Z,1537990460.642 [trackPatchFDOM:SurfaceComms:SurfaceComms](INFO): Completed trackPatchFDOM:SurfaceComms:SurfaceComms
2018-09-26T19:34:20.642Z,1537990460.642 [trackPatchFDOM:SurfaceComms:SurfaceComms] Stopped
2018-09-26T19:34:20.642Z,1537990460.642 [trackPatchFDOM:SurfaceComms:SurfaceComms](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceComms:SurfaceComms
2018-09-26T19:34:20.642Z,1537990460.642 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface] Stopped
2018-09-26T19:34:20.642Z,1537990460.642 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-26T19:34:20.642Z,1537990460.642 [trackPatchFDOM:SurfaceComms](INFO): Completed trackPatchFDOM:SurfaceComms
2018-09-26T19:34:20.642Z,1537990460.642 [trackPatchFDOM:SurfaceComms] Stopped
2018-09-26T19:34:20.642Z,1537990460.642 [trackPatchFDOM:SurfaceComms](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceComms
2018-09-26T19:34:21.059Z,1537990461.059 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:B](INFO): Completed trackPatchFDOM:PatchDetectHorizontal:CrossLeg:B
2018-09-26T19:34:21.059Z,1537990461.059 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:B] Stopped
2018-09-26T19:34:21.059Z,1537990461.059 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:B](DEBUG): Aggregate::uninitialize trackPatchFDOM:PatchDetectHorizontal:CrossLeg:B
2018-09-26T19:34:21.060Z,1537990461.060 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint] Running Loop=1
2018-09-26T19:34:21.060Z,1537990461.060 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-26T19:34:21.061Z,1537990461.061 [trackPatchFDOM:M.YoYo] Running Loop=1
2018-09-26T19:34:21.062Z,1537990461.062 [trackPatchFDOM:L.DepthEnvelope] Running Loop=1
2018-09-26T19:34:21.063Z,1537990461.063 [trackPatchFDOM:K.SetSpeed] Running Loop=1
2018-09-26T19:34:21.063Z,1537990461.063 [trackPatchFDOM:Science] Running Loop=1
2018-09-26T19:34:21.065Z,1537990461.065 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:34:21.065Z,1537990461.065 [trackPatchFDOM:Science:Read_Oil] Running Loop=1
2018-09-26T19:34:21.066Z,1537990461.066 [trackPatchFDOM:Science:C] Running Loop=1
2018-09-26T19:34:21.066Z,1537990461.066 [trackPatchFDOM:Science:A] Running Loop=1
2018-09-26T19:34:21.066Z,1537990461.066 [trackPatchFDOM:I.Buoyancy] Running Loop=1
2018-09-26T19:34:21.067Z,1537990461.067 [trackPatchFDOM:H.Pitch] Running Loop=1
2018-09-26T19:34:21.067Z,1537990461.067 [trackPatchFDOM:G.WaterDepthEnvelope] Running Loop=1
2018-09-26T19:34:21.067Z,1537990461.067 [trackPatchFDOM:F.OffshoreEnvelope] Running Loop=1
2018-09-26T19:34:21.141Z,1537990461.141 [CTD_NeilBrown](INFO): Opening uart, block timeout 10ths=4
2018-09-26T19:34:21.265Z,1537990461.265 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:34:21.411Z,1537990461.411 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-26T19:34:21.411Z,1537990461.411 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-26T19:34:21.677Z,1537990461.677 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:34:22.085Z,1537990462.085 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:34:22.489Z,1537990462.489 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:34:22.933Z,1537990462.933 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:34:27.557Z,1537990467.557 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:34:28.617Z,1537990468.617 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:34:28.982Z,1537990468.982 [Aanderaa_O2](DEBUG): Error parsing data: 4831F	648		349.741		108.268		13.838		29.319		30.547		39.720		9.173		375.6		791.8		372.7	



2018-09-26T19:34:28.982Z,1537990468.982 [Aanderaa_O2](DEBUG): Error parsing device response
2018-09-26T19:34:29.037Z,1537990469.037 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:34:29.465Z,1537990469.465 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:34:29.869Z,1537990469.869 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:34:30.179Z,1537990470.179 [Aanderaa_O2](DEBUG): Error parsing data: 4831F	648		349.302		108.132		13.838		29.333		30.561		39.727		9.165		375.0		789.4		372.7	


2018-09-26T19:34:30.179Z,1537990470.179 [Aanderaa_O2](DEBUG): Error parsing device response
2018-09-26T19:34:30.981Z,1537990470.981 [Aanderaa_O2](DEBUG): Error parsing data: 4831F	648		348.152		107.778		13.839		29.370		30.598		39.762		9.164		375.0		790.1		372.7	



2018-09-26T19:34:30.982Z,1537990470.982 [Aanderaa_O2](DEBUG): Error parsing device response
2018-09-26T19:34:32.179Z,1537990472.179 [Aanderaa_O2](DEBUG): Error parsing data: 4831F	648		348.807		107.973		13.836		29.350		30.578		39.735		9.156		375.0		789.2		372.8	

2018-09-26T19:34:32.179Z,1537990472.179 [Aanderaa_O2](DEBUG): Error parsing device response
2018-09-26T19:34:32.813Z,1537990472.813 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:34:34.505Z,1537990474.505 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:34:37.570Z,1537990477.570 [BuoyancyServo](FAULT): Overload Error
2018-09-26T19:34:37.570Z,1537990477.570 [BuoyancyServo] Hardware Fault, FailCount= 1
2018-09-26T19:34:37.570Z,1537990477.570 [BuoyancyServo](ERROR): Hardware Fault
2018-09-26T19:34:37.725Z,1537990477.725 [CBIT](ERROR): Hardware Fault in component: BuoyancyServo
2018-09-26T19:34:37.870Z,1537990477.870 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:34:38.019Z,1537990478.019 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-26T19:34:38.019Z,1537990478.019 [BuoyancyServo](INFO): Powering down
2018-09-26T19:34:40.142Z,1537990480.142 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-26T19:34:40.143Z,1537990480.143 [BuoyancyServo] No Fault, FailCount= 1
2018-09-26T19:34:40.452Z,1537990480.452 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-26T19:34:40.570Z,1537990480.570 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-26T19:34:41.021Z,1537990481.021 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:34:45.661Z,1537990485.661 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:34:54.697Z,1537990494.697 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:34:56.136Z,1537990496.136 [NAL9602](INFO): Powering down
2018-09-26T19:34:56.590Z,1537990496.590 [Radio_Surface](INFO): Powering down
2018-09-26T19:34:57.025Z,1537990497.025 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:35:00.194Z,1537990500.194 [ElevatorOffsetCalculator](INFO): New estimator for commanded vars: speed 1.00 m/s, pitch -20.00 deg, mass-position 2.00 mm (1 active estimators).
2018-09-26T19:35:00.361Z,1537990500.361 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:35:00.789Z,1537990500.789 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:35:02.041Z,1537990502.041 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:35:02.889Z,1537990502.889 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:35:04.149Z,1537990504.149 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:35:07.033Z,1537990507.033 [ElevatorOffsetCalculator](INFO): New estimator for commanded vars: speed 1.00 m/s, pitch 20.00 deg, mass-position 2.00 mm (2 active estimators).
2018-09-26T19:35:07.501Z,1537990507.501 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:35:08.557Z,1537990508.557 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:35:11.497Z,1537990511.497 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:35:12.969Z,1537990512.969 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:35:19.803Z,1537990519.803 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:35:19.803Z,1537990519.803 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:35:19.803Z,1537990519.803 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:35:19.986Z,1537990519.986 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 2.246640 ppb
2018-09-26T19:35:20.235Z,1537990520.235 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:35:20.235Z,1537990520.235 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:35:20.614Z,1537990520.614 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:35:20.614Z,1537990520.614 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:35:20.614Z,1537990520.614 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:35:20.614Z,1537990520.614 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:35:20.965Z,1537990520.965 [DataOverHttps](INFO): setting unavailable, lastComms_.elapsed()=60.379623
2018-09-26T19:35:22.017Z,1537990522.017 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:35:23.481Z,1537990523.481 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:35:23.893Z,1537990523.893 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:35:24.733Z,1537990524.733 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:35:25.581Z,1537990525.581 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:35:34.615Z,1537990534.615 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:35:34.615Z,1537990534.615 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:35:34.615Z,1537990534.615 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:35:34.826Z,1537990534.826 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 2.196850 ppb
2018-09-26T19:35:35.029Z,1537990535.029 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:35:35.029Z,1537990535.029 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:35:35.441Z,1537990535.441 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:35:35.441Z,1537990535.441 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:35:35.442Z,1537990535.442 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:35:35.442Z,1537990535.442 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:35:39.225Z,1537990539.225 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:35:39.873Z,1537990539.873 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:35:40.909Z,1537990540.909 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:35:44.489Z,1537990544.489 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:35:49.414Z,1537990549.414 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:35:49.414Z,1537990549.414 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:35:49.414Z,1537990549.414 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:35:49.515Z,1537990549.515 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 2.206566 ppb
2018-09-26T19:35:49.812Z,1537990549.812 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:35:49.812Z,1537990549.812 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:35:49.953Z,1537990549.953 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:35:50.255Z,1537990550.255 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:35:50.255Z,1537990550.255 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:35:50.256Z,1537990550.256 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:35:50.256Z,1537990550.256 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:35:52.893Z,1537990552.893 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:35:54.015Z,1537990554.015 [Radio_Surface](INFO): Powering up
2018-09-26T19:35:55.421Z,1537990555.421 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:35:57.337Z,1537990557.337 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T19:35:58.161Z,1537990558.161 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:36:02.094Z,1537990562.094 [Radio_Surface](INFO): Powering down
2018-09-26T19:36:02.498Z,1537990562.498 [Radio_Surface](FAULT): LCB fault:  Invalid Command. Hardware Overcurrent Shutdown. Software Overcurrent.
2018-09-26T19:36:02.498Z,1537990562.498 [Radio_Surface] Hardware Fault, FailCount= 1
2018-09-26T19:36:02.498Z,1537990562.498 [Radio_Surface](ERROR): Hardware Fault
2018-09-26T19:36:02.710Z,1537990562.710 [CBIT](ERROR): Hardware Fault in component: Radio_Surface
2018-09-26T19:36:03.614Z,1537990563.614 [CBIT](INFO): Clearing failed state for component Radio_Surface
2018-09-26T19:36:03.614Z,1537990563.614 [Radio_Surface] No Fault, FailCount= 1
2018-09-26T19:36:03.711Z,1537990563.711 [Radio_Surface](INFO): Powering up
2018-09-26T19:36:06.365Z,1537990566.365 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:36:06.777Z,1537990566.777 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:36:07.845Z,1537990567.845 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:36:07.845Z,1537990567.845 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:36:07.845Z,1537990567.845 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:36:07.917Z,1537990567.917 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 3.175657 ppb
2018-09-26T19:36:08.254Z,1537990568.254 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:36:08.254Z,1537990568.254 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:36:08.621Z,1537990568.621 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:36:08.621Z,1537990568.621 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:36:08.621Z,1537990568.621 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:36:08.622Z,1537990568.622 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:36:09.374Z,1537990569.374 [Radio_Surface](INFO): Powering down
2018-09-26T19:36:14.977Z,1537990574.977 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:36:16.237Z,1537990576.237 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:36:19.175Z,1537990579.175 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:36:21.500Z,1537990581.500 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:36:23.601Z,1537990583.601 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:36:27.181Z,1537990587.181 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:36:27.821Z,1537990587.821 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:36:28.253Z,1537990588.253 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:36:28.253Z,1537990588.253 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:36:28.254Z,1537990588.254 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:36:28.316Z,1537990588.316 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 13.652287 ppb
2018-09-26T19:36:28.619Z,1537990588.619 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:36:28.619Z,1537990588.619 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:36:29.037Z,1537990589.037 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:36:29.038Z,1537990589.038 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:36:29.038Z,1537990589.038 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:36:29.038Z,1537990589.038 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:36:32.143Z,1537990592.143 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T19:36:33.913Z,1537990593.913 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:36:34.446Z,1537990594.446 [Radio_Surface](INFO): Powering up
2018-09-26T19:36:34.541Z,1537990594.541 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:36:35.165Z,1537990595.165 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:36:37.485Z,1537990597.485 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:36:40.112Z,1537990600.112 [Radio_Surface](INFO): Powering down
2018-09-26T19:36:42.608Z,1537990602.608 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:36:42.608Z,1537990602.608 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:36:42.613Z,1537990602.613 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:36:42.818Z,1537990602.818 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 2.582622 ppb
2018-09-26T19:36:43.043Z,1537990603.043 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:36:43.043Z,1537990603.043 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:36:43.431Z,1537990603.431 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:36:43.431Z,1537990603.431 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:36:43.431Z,1537990603.431 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:36:43.431Z,1537990603.431 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:36:53.037Z,1537990613.037 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:37:00.608Z,1537990620.608 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:37:00.608Z,1537990620.608 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:37:00.608Z,1537990620.608 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:37:00.621Z,1537990620.621 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:37:00.658Z,1537990620.658 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 4.590835 ppb
2018-09-26T19:37:01.029Z,1537990621.029 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:37:01.052Z,1537990621.052 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:37:01.052Z,1537990621.052 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:37:01.423Z,1537990621.423 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:37:01.423Z,1537990621.423 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:37:01.423Z,1537990621.423 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:37:01.423Z,1537990621.423 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:37:02.714Z,1537990622.714 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:37:05.657Z,1537990625.657 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:37:05.986Z,1537990625.986 [Radio_Surface](INFO): Powering up
2018-09-26T19:37:07.770Z,1537990627.770 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T19:37:10.281Z,1537990630.281 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:37:12.804Z,1537990632.804 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:37:16.105Z,1537990636.105 [Radio_Surface](INFO): Powering down
2018-09-26T19:37:17.013Z,1537990637.013 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:37:17.441Z,1537990637.441 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:37:19.745Z,1537990639.745 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:37:20.233Z,1537990640.233 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:37:20.233Z,1537990640.233 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:37:20.233Z,1537990640.233 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:37:20.288Z,1537990640.288 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 8.740438 ppb
2018-09-26T19:37:20.633Z,1537990640.633 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:37:20.633Z,1537990640.633 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:37:21.035Z,1537990641.035 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:37:21.036Z,1537990641.036 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:37:21.036Z,1537990641.036 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:37:21.036Z,1537990641.036 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:37:21.817Z,1537990641.817 [RDI_Pathfinder](ERROR): Failed to parse:
:B  +5.91,      +155.92,        +7.73,   0.00, 23.00
2018-09-26T19:37:31.112Z,1537990651.112 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:37:31.733Z,1537990651.733 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:37:32.146Z,1537990652.146 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:37:32.777Z,1537990652.777 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:37:36.573Z,1537990656.573 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:37:39.399Z,1537990659.399 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:37:39.399Z,1537990659.399 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:37:39.400Z,1537990659.400 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:37:39.476Z,1537990659.476 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 3.187797 ppb
2018-09-26T19:37:39.856Z,1537990659.856 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](INFO): Initialize.
2018-09-26T19:37:39.856Z,1537990659.856 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal] Stopped
2018-09-26T19:37:39.856Z,1537990659.856 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-26T19:37:39.861Z,1537990659.861 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:B] Running Loop=1
2018-09-26T19:37:39.867Z,1537990659.867 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:37:39.867Z,1537990659.867 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:37:40.216Z,1537990660.216 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:B](IMPORTANT): Fell below OffPeakFraction. Patch value is 7.391546 ppb at lat = 36.811769 arcdeg , lon = -121.822974 arcdeg , dep = 1.530669 m , distance = 82.410172 m 
2018-09-26T19:37:40.225Z,1537990660.225 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:B] Stopped
2018-09-26T19:37:40.225Z,1537990660.225 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:C] Running Loop=1
2018-09-26T19:37:40.230Z,1537990660.230 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:37:40.230Z,1537990660.230 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:37:40.230Z,1537990660.230 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:37:40.230Z,1537990660.230 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:37:40.612Z,1537990660.612 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:C] Stopped
2018-09-26T19:37:40.612Z,1537990660.612 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:AssignPatchDetectOff] Running Loop=1
2018-09-26T19:37:41.018Z,1537990661.018 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:AssignPatchDetectOff] Stopped
2018-09-26T19:37:41.018Z,1537990661.018 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection](INFO): Completed trackPatchFDOM:PatchDetectHorizontal:PatchDetection
2018-09-26T19:37:41.018Z,1537990661.018 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection] Stopped
2018-09-26T19:37:41.018Z,1537990661.018 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection](DEBUG): Aggregate::uninitialize trackPatchFDOM:PatchDetectHorizontal:PatchDetection
2018-09-26T19:37:41.416Z,1537990661.416 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg] Stopped
2018-09-26T19:37:41.416Z,1537990661.416 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg](DEBUG): Aggregate::uninitialize trackPatchFDOM:PatchDetectHorizontal:CrossLeg
2018-09-26T19:37:41.416Z,1537990661.416 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint] Stopped
2018-09-26T19:37:41.421Z,1537990661.421 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-26T19:37:41.421Z,1537990661.421 [trackPatchFDOM:PatchDetectHorizontal:AssignWpBearingForInLeg] Running Loop=1
2018-09-26T19:37:41.863Z,1537990661.863 [trackPatchFDOM:PatchDetectHorizontal:AssignWpBearingForInLeg] Stopped
2018-09-26T19:37:41.863Z,1537990661.863 [trackPatchFDOM:PatchDetectHorizontal:F] Running Loop=1
2018-09-26T19:37:42.214Z,1537990662.214 [trackPatchFDOM:PatchDetectHorizontal:F](IMPORTANT): Next: bearing for InLeg: 90.000000 arcdeg . Current lat, lon = 36.811161 arcdeg , -121.823213 arcdeg . Patch value is 7.391546 ppb at lat = 36.811769 arcdeg , lon = -121.822974 arcdeg , dep = 1.530669 m , distance = 82.410172 m 
2018-09-26T19:37:42.215Z,1537990662.215 [trackPatchFDOM:PatchDetectHorizontal:F] Stopped
2018-09-26T19:37:42.216Z,1537990662.216 [trackPatchFDOM:PatchDetectHorizontal:InLegWp.Waypoint] Running Loop=1
2018-09-26T19:37:42.216Z,1537990662.216 [trackPatchFDOM:PatchDetectHorizontal:InLegWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-26T19:37:42.544Z,1537990662.544 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T19:37:45.222Z,1537990665.222 [Radio_Surface](INFO): Powering up
2018-09-26T19:37:52.550Z,1537990672.550 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:37:52.965Z,1537990672.965 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:37:54.657Z,1537990674.657 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:37:57.397Z,1537990677.397 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:38:01.381Z,1537990681.381 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:38:01.406Z,1537990681.406 [Radio_Surface](INFO): Powering down
2018-09-26T19:38:08.113Z,1537990688.113 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:38:08.613Z,1537990688.613 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:38:08.613Z,1537990688.613 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:38:08.613Z,1537990688.613 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:38:08.727Z,1537990688.727 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 3.707965 ppb
2018-09-26T19:38:09.045Z,1537990689.045 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:38:09.045Z,1537990689.045 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:38:09.366Z,1537990689.366 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:38:09.403Z,1537990689.403 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:38:09.403Z,1537990689.403 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:38:09.403Z,1537990689.403 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:38:09.403Z,1537990689.403 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:38:17.349Z,1537990697.349 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:38:18.150Z,1537990698.150 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T19:38:23.877Z,1537990703.877 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:38:26.222Z,1537990706.222 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:38:26.222Z,1537990706.222 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:38:26.222Z,1537990706.222 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:38:26.225Z,1537990706.225 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:38:26.283Z,1537990706.283 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 2.208180 ppb
2018-09-26T19:38:26.603Z,1537990706.603 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:38:26.604Z,1537990706.604 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:38:27.030Z,1537990707.030 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:38:27.030Z,1537990707.030 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:38:27.030Z,1537990707.030 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:38:27.030Z,1537990707.030 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:38:27.449Z,1537990707.449 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:38:29.129Z,1537990709.129 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:38:31.853Z,1537990711.853 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:38:34.545Z,1537990714.545 [Radio_Surface](INFO): Powering up
2018-09-26T19:38:40.057Z,1537990720.057 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:38:40.206Z,1537990720.206 [Radio_Surface](INFO): Powering down
2018-09-26T19:38:41.117Z,1537990721.117 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:38:45.820Z,1537990725.820 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:38:45.820Z,1537990725.820 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:38:45.820Z,1537990725.820 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:38:45.952Z,1537990725.952 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 3.330691 ppb
2018-09-26T19:38:46.185Z,1537990726.185 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:38:46.227Z,1537990726.227 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:38:46.228Z,1537990726.228 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:38:46.610Z,1537990726.610 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:38:46.611Z,1537990726.611 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:38:46.611Z,1537990726.611 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:38:46.611Z,1537990726.611 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:38:47.417Z,1537990727.417 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:38:49.933Z,1537990729.933 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:38:50.773Z,1537990730.773 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:38:52.946Z,1537990732.946 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T19:38:54.769Z,1537990734.769 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:38:55.189Z,1537990735.189 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:38:55.829Z,1537990735.829 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:38:59.021Z,1537990739.021 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:39:00.237Z,1537990740.237 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:39:00.237Z,1537990740.237 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:39:00.238Z,1537990740.238 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:39:00.290Z,1537990740.290 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 12.261390 ppb
2018-09-26T19:39:00.627Z,1537990740.627 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:39:00.628Z,1537990740.628 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:39:00.665Z,1537990740.665 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:39:01.069Z,1537990741.069 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:39:01.069Z,1537990741.069 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:39:01.069Z,1537990741.069 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:39:01.070Z,1537990741.070 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:39:01.085Z,1537990741.085 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:39:01.513Z,1537990741.513 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:39:02.345Z,1537990742.345 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:39:04.854Z,1537990744.854 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:39:05.063Z,1537990745.063 [trackPatchFDOM:PatchDetectHorizontal:InLegWp.Waypoint] Stopped
2018-09-26T19:39:05.063Z,1537990745.063 [trackPatchFDOM:PatchDetectHorizontal:InLegWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-26T19:39:05.064Z,1537990745.064 [trackPatchFDOM:PatchDetectHorizontal:AssignWpBearingForOutLeg] Running Loop=1
2018-09-26T19:39:05.430Z,1537990745.430 [trackPatchFDOM:PatchDetectHorizontal:AssignWpBearingForOutLeg] Stopped
2018-09-26T19:39:05.430Z,1537990745.430 [trackPatchFDOM:PatchDetectHorizontal:I] Running Loop=1
2018-09-26T19:39:05.864Z,1537990745.864 [trackPatchFDOM:PatchDetectHorizontal:I](IMPORTANT): Next: bearing for OutLeg: -54.000000 arcdeg . WpMaxDistance = 200.000000 m . Current lat, lon = 36.811127 arcdeg , -121.822884 arcdeg . Patch value is 7.391546 ppb at lat = 36.811769 arcdeg , lon = -121.822974 arcdeg , dep = 1.530669 m , distance = 82.410172 m 
2018-09-26T19:39:05.870Z,1537990745.870 [trackPatchFDOM:PatchDetectHorizontal:I] Stopped
2018-09-26T19:39:05.870Z,1537990745.870 [trackPatchFDOM:PatchDetectHorizontal:J] Running Loop=1
2018-09-26T19:39:05.870Z,1537990745.870 [trackPatchFDOM:PatchDetectHorizontal:J](DEBUG): Aggregate::initialize trackPatchFDOM:PatchDetectHorizontal:J
2018-09-26T19:39:06.074Z,1537990746.074 [Radio_Surface](INFO): Powering up
2018-09-26T19:39:06.217Z,1537990746.217 [trackPatchFDOM:SurfaceCommsSplit] Running Loop=1
2018-09-26T19:39:06.217Z,1537990746.217 [trackPatchFDOM:SurfaceCommsSplit](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceCommsSplit
2018-09-26T19:39:06.217Z,1537990746.217 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface] Running Loop=1
2018-09-26T19:39:06.217Z,1537990746.217 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-26T19:39:06.218Z,1537990746.218 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-26T19:39:06.218Z,1537990746.218 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-26T19:39:06.218Z,1537990746.218 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-26T19:39:06.219Z,1537990746.219 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-26T19:39:06.219Z,1537990746.219 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-26T19:39:06.225Z,1537990746.225 [trackPatchFDOM:SurfaceCommsSplit:B] Running Loop=1
2018-09-26T19:39:06.226Z,1537990746.226 [trackPatchFDOM:SurfaceCommsSplit:B](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceCommsSplit:B
2018-09-26T19:39:06.226Z,1537990746.226 [trackPatchFDOM:SurfaceCommsSplit:B:A] Running Loop=1
2018-09-26T19:39:06.602Z,1537990746.602 [trackPatchFDOM:SurfaceCommsSplit:B:A](INFO): ##UnpackSplit##
2018-09-26T19:39:06.602Z,1537990746.602 [trackPatchFDOM:SurfaceCommsSplit:B:A] Stopped
2018-09-26T19:39:06.602Z,1537990746.602 [trackPatchFDOM:SurfaceCommsSplit:B](INFO): Completed trackPatchFDOM:SurfaceCommsSplit:B
2018-09-26T19:39:06.602Z,1537990746.602 [trackPatchFDOM:SurfaceCommsSplit:B] Stopped
2018-09-26T19:39:06.603Z,1537990746.603 [trackPatchFDOM:SurfaceCommsSplit:B](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceCommsSplit:B
2018-09-26T19:39:06.603Z,1537990746.603 [trackPatchFDOM:SurfaceCommsSplit:C] Running Loop=1
2018-09-26T19:39:06.603Z,1537990746.603 [trackPatchFDOM:SurfaceCommsSplit:C](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceCommsSplit:C
2018-09-26T19:39:06.603Z,1537990746.603 [trackPatchFDOM:SurfaceCommsSplit:C:A] Running Loop=1
2018-09-26T19:39:07.032Z,1537990747.032 [trackPatchFDOM:M.YoYo] Preempted
2018-09-26T19:39:07.037Z,1537990747.037 [trackPatchFDOM:L.DepthEnvelope] Preempted
2018-09-26T19:39:07.037Z,1537990747.037 [trackPatchFDOM:K.SetSpeed] Preempted
2018-09-26T19:39:07.037Z,1537990747.037 [trackPatchFDOM:Science] Preempted
2018-09-26T19:39:07.037Z,1537990747.037 [trackPatchFDOM:Science:A] Preempted
2018-09-26T19:39:07.037Z,1537990747.037 [trackPatchFDOM:Science:C] Preempted
2018-09-26T19:39:07.037Z,1537990747.037 [trackPatchFDOM:Science:Read_Oil] Preempted
2018-09-26T19:39:07.037Z,1537990747.037 [trackPatchFDOM:Science:PeakDetectFDOM] Preempted
2018-09-26T19:39:07.037Z,1537990747.037 [trackPatchFDOM:I.Buoyancy] Preempted
2018-09-26T19:39:07.038Z,1537990747.038 [trackPatchFDOM:H.Pitch] Preempted
2018-09-26T19:39:07.038Z,1537990747.038 [trackPatchFDOM:G.WaterDepthEnvelope] Preempted
2018-09-26T19:39:07.038Z,1537990747.038 [trackPatchFDOM:F.OffshoreEnvelope] Preempted
2018-09-26T19:39:07.342Z,1537990747.342 [NAL9602](INFO): Powering up
2018-09-26T19:39:07.401Z,1537990747.401 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-26T19:39:07.857Z,1537990747.857 [Aanderaa_O2](INFO): Powering down
2018-09-26T19:39:12.121Z,1537990752.121 [BuoyancyServo](ERROR): getPosition uart error serial timeout
2018-09-26T19:39:12.121Z,1537990752.121 [BuoyancyServo](FAULT): Buoyancy getPosition uart error.serial timeout
2018-09-26T19:39:12.121Z,1537990752.121 [BuoyancyServo] Communications Fault, FailCount= 1
2018-09-26T19:39:12.121Z,1537990752.121 [BuoyancyServo](ERROR): Communications Fault
2018-09-26T19:39:12.127Z,1537990752.127 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-09-26T19:39:12.238Z,1537990752.238 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-26T19:39:12.239Z,1537990752.239 [BuoyancyServo](INFO): Powering down
2018-09-26T19:39:13.820Z,1537990753.820 [BuoyancyServo](FAULT): LCB fault:  Current Limiter Activated.
2018-09-26T19:39:13.825Z,1537990753.825 [BuoyancyServo] Hardware Fault, FailCount= 1
2018-09-26T19:39:13.825Z,1537990753.825 [BuoyancyServo](ERROR): Hardware Fault
2018-09-26T19:39:14.252Z,1537990754.252 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-26T19:39:14.252Z,1537990754.252 [BuoyancyServo] No Fault, FailCount= 1
2018-09-26T19:39:14.620Z,1537990754.620 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-26T19:39:14.734Z,1537990754.734 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-26T19:39:18.152Z,1537990758.152 [NAL9602](INFO): NAL9602 initialized
2018-09-26T19:39:19.373Z,1537990759.373 [BuoyancyServo](ERROR): getPosition uart error serial timeout
2018-09-26T19:39:19.373Z,1537990759.373 [BuoyancyServo](FAULT): Buoyancy getPosition uart error.serial timeout
2018-09-26T19:39:19.373Z,1537990759.373 [BuoyancyServo] Communications Fault, FailCount= 2
2018-09-26T19:39:19.373Z,1537990759.373 [BuoyancyServo](ERROR): Communications Fault
2018-09-26T19:39:19.379Z,1537990759.379 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-09-26T19:39:19.492Z,1537990759.492 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-26T19:39:19.497Z,1537990759.497 [BuoyancyServo](INFO): Powering down
2018-09-26T19:39:21.086Z,1537990761.086 [BuoyancyServo](FAULT): LCB fault:  Current Limiter Activated.
2018-09-26T19:39:21.086Z,1537990761.086 [BuoyancyServo] Hardware Fault, FailCount= 2
2018-09-26T19:39:21.086Z,1537990761.086 [BuoyancyServo](ERROR): Hardware Fault
2018-09-26T19:39:21.480Z,1537990761.480 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-26T19:39:21.480Z,1537990761.480 [BuoyancyServo] No Fault, FailCount= 2
2018-09-26T19:39:21.924Z,1537990761.924 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-26T19:39:22.038Z,1537990762.038 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-26T19:39:28.201Z,1537990768.201 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T19:39:36.624Z,1537990776.624 [NAL9602](INFO): SBD MO Status=2, MOMSN=1731, MT Status=2, MTMSN=0
2018-09-26T19:39:36.624Z,1537990776.624 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-26T19:40:03.400Z,1537990803.400 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T19:40:19.408Z,1537990819.408 [NAL9602](INFO): SBD MO Status=2, MOMSN=1731, MT Status=2, MTMSN=0
2018-09-26T19:40:19.408Z,1537990819.408 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2018-09-26T19:40:29.008Z,1537990829.008 [NAL9602](INFO): SBD MO Status=0, MOMSN=1731, MT Status=0, MTMSN=0
2018-09-26T19:40:29.008Z,1537990829.008 [NAL9602](INFO): No messages in MT queue
2018-09-26T19:40:39.000Z,1537990839.000 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T19:41:14.201Z,1537990874.201 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T19:41:49.000Z,1537990909.000 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T19:42:24.201Z,1537990944.201 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T19:42:33.946Z,1537990953.946 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.017443
2018-09-26T19:44:20.255Z,1537991060.255 [RDI_Pathfinder](ERROR): Failed to parse:
:HM,G,D,0e8c,0ffe,*15.363,*-0.045,*0.000
2018-09-26T19:44:54.530Z,1537991094.530 [NAL9602](INFO): GPS fix at 20180926T194453: (36.812573, -121.824715)
2018-09-26T19:44:54.599Z,1537991094.599 [trackPatchFDOM:SurfaceCommsSplit:C:A] Stopped
2018-09-26T19:44:54.600Z,1537991094.600 [trackPatchFDOM:SurfaceCommsSplit:C:B] Running Loop=1
2018-09-26T19:44:59.138Z,1537991099.138 [DataOverHttps](INFO): Sending 62 bytes from file Logs/20180926T190706/Courier0021.lzma
2018-09-26T19:44:59.899Z,1537991099.899 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Courier0021.lzma.bak
2018-09-26T19:44:59.899Z,1537991099.899 [DataOverHttps](INFO): SBD MOMSN=8601510
2018-09-26T19:45:09.498Z,1537991109.498 [DataOverHttps](INFO): Sending 1243 bytes from file Logs/20180926T190706/Express0022.lzma
2018-09-26T19:45:10.257Z,1537991110.257 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Express0022.lzma.bak
2018-09-26T19:45:10.257Z,1537991110.257 [DataOverHttps](INFO): SBD MOMSN=8601513
2018-09-26T19:45:10.972Z,1537991110.972 [trackPatchFDOM:SurfaceCommsSplit:C:B] Stopped
2018-09-26T19:45:10.973Z,1537991110.973 [trackPatchFDOM:SurfaceCommsSplit:C:C] Running Loop=1
2018-09-26T19:45:15.350Z,1537991115.350 [NAL9602](INFO): GPS fix at 20180926T194514: (36.812587, -121.824687)
2018-09-26T19:45:15.417Z,1537991115.417 [trackPatchFDOM:SurfaceCommsSplit:C:C] Stopped
2018-09-26T19:45:15.417Z,1537991115.417 [trackPatchFDOM:SurfaceCommsSplit:C](INFO): Completed trackPatchFDOM:SurfaceCommsSplit:C
2018-09-26T19:45:15.417Z,1537991115.417 [trackPatchFDOM:SurfaceCommsSplit:C] Stopped
2018-09-26T19:45:15.418Z,1537991115.418 [trackPatchFDOM:SurfaceCommsSplit:C](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceCommsSplit:C
2018-09-26T19:45:15.419Z,1537991115.419 [trackPatchFDOM:SurfaceCommsSplit](INFO): Completed trackPatchFDOM:SurfaceCommsSplit
2018-09-26T19:45:15.419Z,1537991115.419 [trackPatchFDOM:SurfaceCommsSplit] Stopped
2018-09-26T19:45:15.419Z,1537991115.419 [trackPatchFDOM:SurfaceCommsSplit](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceCommsSplit
2018-09-26T19:45:15.419Z,1537991115.419 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface] Stopped
2018-09-26T19:45:15.419Z,1537991115.419 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-26T19:45:15.814Z,1537991115.814 [trackPatchFDOM:PatchDetectHorizontal:J](INFO): Completed trackPatchFDOM:PatchDetectHorizontal:J
2018-09-26T19:45:15.814Z,1537991115.814 [trackPatchFDOM:PatchDetectHorizontal:J] Stopped
2018-09-26T19:45:15.814Z,1537991115.814 [trackPatchFDOM:PatchDetectHorizontal:J](DEBUG): Aggregate::uninitialize trackPatchFDOM:PatchDetectHorizontal:J
2018-09-26T19:45:15.814Z,1537991115.814 [trackPatchFDOM:PatchDetectHorizontal:AssignPatchDetectOnForOutLeg] Running Loop=1
2018-09-26T19:45:15.814Z,1537991115.814 [trackPatchFDOM:M.YoYo] Running Loop=1
2018-09-26T19:45:15.815Z,1537991115.815 [trackPatchFDOM:L.DepthEnvelope] Running Loop=1
2018-09-26T19:45:15.815Z,1537991115.815 [trackPatchFDOM:K.SetSpeed] Running Loop=1
2018-09-26T19:45:15.816Z,1537991115.816 [trackPatchFDOM:Science] Running Loop=1
2018-09-26T19:45:15.818Z,1537991115.818 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:45:15.818Z,1537991115.818 [trackPatchFDOM:Science:Read_Oil] Running Loop=1
2018-09-26T19:45:15.818Z,1537991115.818 [trackPatchFDOM:Science:C] Running Loop=1
2018-09-26T19:45:15.819Z,1537991115.819 [trackPatchFDOM:Science:A] Running Loop=1
2018-09-26T19:45:15.819Z,1537991115.819 [trackPatchFDOM:I.Buoyancy] Running Loop=1
2018-09-26T19:45:15.819Z,1537991115.819 [trackPatchFDOM:H.Pitch] Running Loop=1
2018-09-26T19:45:15.820Z,1537991115.820 [trackPatchFDOM:G.WaterDepthEnvelope] Running Loop=1
2018-09-26T19:45:15.820Z,1537991115.820 [trackPatchFDOM:F.OffshoreEnvelope] Running Loop=1
2018-09-26T19:45:15.966Z,1537991115.966 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-26T19:45:15.967Z,1537991115.967 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-26T19:45:16.198Z,1537991116.198 [CTD_NeilBrown](INFO): Opening uart, block timeout 10ths=4
2018-09-26T19:45:16.217Z,1537991116.217 [trackPatchFDOM:PatchDetectHorizontal:AssignPatchDetectOnForOutLeg] Stopped
2018-09-26T19:45:16.218Z,1537991116.218 [trackPatchFDOM:PatchDetectHorizontal:OutLeg] Running Loop=1
2018-09-26T19:45:16.218Z,1537991116.218 [trackPatchFDOM:PatchDetectHorizontal:OutLeg](DEBUG): Aggregate::initialize trackPatchFDOM:PatchDetectHorizontal:OutLeg
2018-09-26T19:45:16.218Z,1537991116.218 [trackPatchFDOM:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint] Running Loop=1
2018-09-26T19:45:16.218Z,1537991116.218 [trackPatchFDOM:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-26T19:45:16.321Z,1537991116.321 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:45:16.617Z,1537991116.617 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection] Running Loop=1
2018-09-26T19:45:16.617Z,1537991116.617 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection](DEBUG): Aggregate::initialize trackPatchFDOM:PatchDetectHorizontal:PatchDetection
2018-09-26T19:45:16.617Z,1537991116.617 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal] Running Loop=1
2018-09-26T19:45:16.617Z,1537991116.617 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](INFO): Initialize.
2018-09-26T19:45:16.729Z,1537991116.729 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:45:17.133Z,1537991117.133 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:45:17.541Z,1537991117.541 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:45:18.509Z,1537991118.509 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:45:23.733Z,1537991123.733 [Aanderaa_O2](DEBUG): Error parsing data: 4831F	648		349.460		108.046		13.782		29.354		30.582		39.714		9.132		366.0		787.4		374.5	



2018-09-26T19:45:23.734Z,1537991123.734 [Aanderaa_O2](DEBUG): Error parsing device response
2018-09-26T19:45:24.946Z,1537991124.946 [Aanderaa_O2](DEBUG): Error parsing data: 4831F	648		349.283		107.999		13.785		29.358		30.586		39.720		9.133		366.0		788.5		374.4	


2018-09-26T19:45:24.946Z,1537991124.946 [Aanderaa_O2](DEBUG): Error parsing device response
2018-09-26T19:45:26.497Z,1537991126.497 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:45:26.931Z,1537991126.931 [Aanderaa_O2](DEBUG): Error parsing data: 4831F	648		349.941		108.203		13.785		29.337		30.565		39.689		9.124		365.9		787.2		374.4	

2018-09-26T19:45:26.931Z,1537991126.931 [Aanderaa_O2](DEBUG): Error parsing device response
2018-09-26T19:45:29.090Z,1537991129.090 [BuoyancyServo](FAULT): Overload Error
2018-09-26T19:45:29.091Z,1537991129.091 [BuoyancyServo] Hardware Fault, FailCount= 1
2018-09-26T19:45:29.091Z,1537991129.091 [BuoyancyServo](ERROR): Hardware Fault
2018-09-26T19:45:29.163Z,1537991129.163 [CBIT](ERROR): Hardware Fault in component: BuoyancyServo
2018-09-26T19:45:29.438Z,1537991129.438 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-26T19:45:29.439Z,1537991129.439 [BuoyancyServo](INFO): Powering down
2018-09-26T19:45:31.486Z,1537991131.486 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-26T19:45:31.486Z,1537991131.486 [BuoyancyServo] No Fault, FailCount= 1
2018-09-26T19:45:31.872Z,1537991131.872 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-26T19:45:31.990Z,1537991131.990 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-26T19:45:34.493Z,1537991134.493 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:45:48.393Z,1537991148.393 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:45:50.086Z,1537991150.086 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:45:52.536Z,1537991152.536 [NAL9602](INFO): Powering down
2018-09-26T19:45:53.279Z,1537991153.279 [RDI_Pathfinder](ERROR): Failed to parse:
:HM,G,D,0e8d,0ffe,*15.282,*-0.067,*0.000
2018-09-26T19:45:53.649Z,1537991153.649 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:45:54.697Z,1537991154.697 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:45:56.601Z,1537991156.601 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:45:58.917Z,1537991158.917 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:45:59.546Z,1537991159.546 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:46:02.705Z,1537991162.705 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:46:14.066Z,1537991174.066 [Radio_Surface](INFO): Powering down
2018-09-26T19:46:14.914Z,1537991174.914 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:46:15.353Z,1537991175.353 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:46:18.065Z,1537991178.065 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:46:19.435Z,1537991179.435 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:46:19.435Z,1537991179.435 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:46:19.436Z,1537991179.436 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:46:19.538Z,1537991179.538 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 10.862401 ppb
2018-09-26T19:46:19.805Z,1537991179.805 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:46:19.806Z,1537991179.806 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:46:20.191Z,1537991180.191 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:46:20.191Z,1537991180.191 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:46:20.191Z,1537991180.191 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:46:20.191Z,1537991180.191 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:46:22.126Z,1537991182.126 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-32768,V
2018-09-26T19:46:22.265Z,1537991182.265 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:46:24.153Z,1537991184.153 [RDI_Pathfinder](ERROR): only read 4 of 5 data items
2018-09-26T19:46:24.153Z,1537991184.153 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-32BS,-3276,-32768,V
2018-09-26T19:46:25.625Z,1537991185.625 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:46:29.205Z,1537991189.205 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:46:35.101Z,1537991195.101 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:46:35.521Z,1537991195.521 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:46:36.145Z,1537991196.145 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:46:40.620Z,1537991200.620 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:46:40.620Z,1537991200.620 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:46:40.620Z,1537991200.620 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:46:40.679Z,1537991200.679 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 7.050000 ppb
2018-09-26T19:46:41.052Z,1537991201.052 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:46:41.052Z,1537991201.052 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:46:41.409Z,1537991201.409 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:46:41.409Z,1537991201.409 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:46:41.409Z,1537991201.409 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:46:41.409Z,1537991201.409 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:46:43.093Z,1537991203.093 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:46:43.933Z,1537991203.933 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:46:46.453Z,1537991206.453 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:46:49.226Z,1537991209.226 [Radio_Surface](INFO): Powering up
2018-09-26T19:46:51.350Z,1537991211.350 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T19:46:53.747Z,1537991213.747 [DataOverHttps](INFO): setting unavailable, lastComms_.elapsed()=60.112659
2018-09-26T19:46:54.608Z,1537991214.608 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:46:54.608Z,1537991214.608 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:46:54.617Z,1537991214.617 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:46:54.694Z,1537991214.694 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 3.771525 ppb
2018-09-26T19:46:54.882Z,1537991214.882 [Radio_Surface](INFO): Powering down
2018-09-26T19:46:55.023Z,1537991215.023 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:46:55.023Z,1537991215.023 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:46:55.460Z,1537991215.460 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:46:55.470Z,1537991215.470 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:46:55.470Z,1537991215.470 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:46:55.470Z,1537991215.470 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:47:02.209Z,1537991222.209 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:47:06.617Z,1537991226.617 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:47:09.777Z,1537991229.777 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:47:10.254Z,1537991230.254 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:47:10.254Z,1537991230.254 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:47:10.255Z,1537991230.255 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:47:10.312Z,1537991230.312 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 3.733879 ppb
2018-09-26T19:47:10.616Z,1537991230.616 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:47:10.616Z,1537991230.616 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:47:11.064Z,1537991231.064 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:47:11.064Z,1537991231.064 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:47:11.064Z,1537991231.064 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:47:11.064Z,1537991231.064 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:47:13.977Z,1537991233.977 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:47:23.864Z,1537991243.864 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:47:23.864Z,1537991243.864 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:47:23.873Z,1537991243.873 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:47:24.070Z,1537991244.070 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 7.115170 ppb
2018-09-26T19:47:24.230Z,1537991244.230 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:47:24.230Z,1537991244.230 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:47:24.628Z,1537991244.628 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:47:24.633Z,1537991244.633 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:47:24.633Z,1537991244.633 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:47:24.633Z,1537991244.633 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:47:26.946Z,1537991246.946 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T19:47:27.217Z,1537991247.217 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:47:27.637Z,1537991247.637 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:47:29.533Z,1537991249.533 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:47:32.693Z,1537991252.693 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:47:36.469Z,1537991256.469 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:47:36.632Z,1537991256.632 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:47:36.632Z,1537991256.632 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:47:36.632Z,1537991256.632 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:47:36.873Z,1537991256.873 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 10.353165 ppb
2018-09-26T19:47:37.056Z,1537991257.056 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:47:37.065Z,1537991257.065 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:47:37.408Z,1537991257.408 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:47:37.408Z,1537991257.408 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:47:37.408Z,1537991257.408 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:47:37.413Z,1537991257.413 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:47:40.889Z,1537991260.889 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:47:41.794Z,1537991261.794 [Radio_Surface](INFO): Powering up
2018-09-26T19:47:42.773Z,1537991262.773 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:47:44.042Z,1537991264.042 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:47:46.353Z,1537991266.353 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:47:47.450Z,1537991267.450 [Radio_Surface](INFO): Powering down
2018-09-26T19:47:49.509Z,1537991269.509 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:47:51.609Z,1537991271.609 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:47:52.030Z,1537991272.030 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:47:52.449Z,1537991272.449 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:47:55.040Z,1537991275.040 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:47:55.040Z,1537991275.040 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:47:55.040Z,1537991275.040 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:47:55.210Z,1537991275.210 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 6.402721 ppb
2018-09-26T19:47:55.417Z,1537991275.417 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:47:55.417Z,1537991275.417 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:47:55.887Z,1537991275.887 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:47:55.887Z,1537991275.887 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:47:55.887Z,1537991275.887 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:47:55.887Z,1537991275.887 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:47:58.125Z,1537991278.125 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:48:01.776Z,1537991281.776 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T19:48:01.905Z,1537991281.905 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:48:04.431Z,1537991284.431 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:48:05.696Z,1537991285.696 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:48:09.065Z,1537991289.065 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:48:12.648Z,1537991292.648 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:48:12.648Z,1537991292.648 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:48:12.648Z,1537991292.648 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:48:12.710Z,1537991292.710 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 37.958902 ppb
2018-09-26T19:48:13.051Z,1537991293.051 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:48:13.051Z,1537991293.051 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:48:13.431Z,1537991293.431 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:48:13.431Z,1537991293.431 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:48:13.431Z,1537991293.431 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:48:13.431Z,1537991293.431 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:48:18.610Z,1537991298.610 [Radio_Surface](INFO): Powering up
2018-09-26T19:48:22.099Z,1537991302.099 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:48:22.726Z,1537991302.726 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:48:25.490Z,1537991305.490 [Radio_Surface](INFO): Powering down
2018-09-26T19:48:26.521Z,1537991306.521 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:48:30.258Z,1537991310.258 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:48:30.259Z,1537991310.259 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:48:30.259Z,1537991310.259 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:48:30.309Z,1537991310.309 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:48:30.374Z,1537991310.374 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 4.541044 ppb
2018-09-26T19:48:30.633Z,1537991310.633 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:48:30.633Z,1537991310.633 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:48:31.048Z,1537991311.048 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:48:31.048Z,1537991311.048 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:48:31.048Z,1537991311.048 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:48:31.048Z,1537991311.048 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:48:31.141Z,1537991311.141 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:48:36.817Z,1537991316.817 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:48:36.955Z,1537991316.955 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T19:48:37.418Z,1537991317.418 [trackPatchFDOM:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint] Stopped
2018-09-26T19:48:37.419Z,1537991317.419 [trackPatchFDOM:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-26T19:48:37.419Z,1537991317.419 [trackPatchFDOM:PatchDetectHorizontal:OutLeg:AssignPatchDetectOffInOutLeg] Running Loop=1
2018-09-26T19:48:37.824Z,1537991317.824 [trackPatchFDOM:PatchDetectHorizontal:OutLeg:AssignPatchDetectOffInOutLeg] Stopped
2018-09-26T19:48:37.824Z,1537991317.824 [trackPatchFDOM:PatchDetectHorizontal:OutLeg:AssignWpDoneInOutLeg] Running Loop=1
2018-09-26T19:48:38.252Z,1537991318.252 [trackPatchFDOM:PatchDetectHorizontal:OutLeg] Stopped
2018-09-26T19:48:38.252Z,1537991318.252 [trackPatchFDOM:PatchDetectHorizontal:OutLeg](DEBUG): Aggregate::uninitialize trackPatchFDOM:PatchDetectHorizontal:OutLeg
2018-09-26T19:48:38.252Z,1537991318.252 [trackPatchFDOM:PatchDetectHorizontal:OutLeg:AssignWpDoneInOutLeg] Stopped
2018-09-26T19:48:38.258Z,1537991318.258 [trackPatchFDOM:PatchDetectHorizontal:AssignWpBearingForCrossLeg] Running Loop=1
2018-09-26T19:48:38.628Z,1537991318.628 [trackPatchFDOM:PatchDetectHorizontal:AssignWpBearingForCrossLeg] Stopped
2018-09-26T19:48:38.633Z,1537991318.633 [trackPatchFDOM:PatchDetectHorizontal](INFO): Completed trackPatchFDOM:PatchDetectHorizontal
2018-09-26T19:48:38.633Z,1537991318.633 [trackPatchFDOM:PatchDetectHorizontal] Stopped
2018-09-26T19:48:38.634Z,1537991318.634 [trackPatchFDOM:PatchDetectHorizontal](DEBUG): Aggregate::uninitialize trackPatchFDOM:PatchDetectHorizontal
2018-09-26T19:48:38.634Z,1537991318.634 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection] Stopped
2018-09-26T19:48:38.634Z,1537991318.634 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection](DEBUG): Aggregate::uninitialize trackPatchFDOM:PatchDetectHorizontal:PatchDetection
2018-09-26T19:48:38.634Z,1537991318.634 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal] Stopped
2018-09-26T19:48:38.634Z,1537991318.634 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-26T19:48:38.635Z,1537991318.635 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](INFO): Initialize.
2018-09-26T19:48:38.636Z,1537991318.636 [trackPatchFDOM:PatchDetectHorizontal](INFO): Running loop #2
2018-09-26T19:48:38.636Z,1537991318.636 [trackPatchFDOM:PatchDetectHorizontal] Running Loop=2
2018-09-26T19:48:38.645Z,1537991318.645 [trackPatchFDOM:PatchDetectHorizontal](DEBUG): Aggregate::initialize trackPatchFDOM:PatchDetectHorizontal
2018-09-26T19:48:38.645Z,1537991318.645 [trackPatchFDOM:PatchDetectHorizontal:AssignPatchDetectOn] Running Loop=1
2018-09-26T19:48:39.004Z,1537991319.004 [trackPatchFDOM:PatchDetectHorizontal:AssignPatchDetectOn] Stopped
2018-09-26T19:48:39.004Z,1537991319.004 [trackPatchFDOM:PatchDetectHorizontal:C] Running Loop=1
2018-09-26T19:48:39.488Z,1537991319.488 [trackPatchFDOM:PatchDetectHorizontal:C](IMPORTANT): Next: bearing for CrossLeg: 126.000000 arcdeg . WpMaxDistance = 200.000000 m . Current lat, lon = 36.812675 arcdeg , -121.826007 arcdeg .
2018-09-26T19:48:39.488Z,1537991319.488 [trackPatchFDOM:PatchDetectHorizontal:C] Stopped
2018-09-26T19:48:39.488Z,1537991319.488 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg] Running Loop=1
2018-09-26T19:48:39.488Z,1537991319.488 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg](DEBUG): Aggregate::initialize trackPatchFDOM:PatchDetectHorizontal:CrossLeg
2018-09-26T19:48:39.493Z,1537991319.493 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint] Running Loop=1
2018-09-26T19:48:39.493Z,1537991319.493 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-26T19:48:39.494Z,1537991319.494 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection] Running Loop=1
2018-09-26T19:48:39.494Z,1537991319.494 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection](DEBUG): Aggregate::initialize trackPatchFDOM:PatchDetectHorizontal:PatchDetection
2018-09-26T19:48:39.494Z,1537991319.494 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal] Running Loop=1
2018-09-26T19:48:39.494Z,1537991319.494 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](INFO): Initialize.
2018-09-26T19:48:40.605Z,1537991320.605 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:48:43.965Z,1537991323.965 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:48:44.216Z,1537991324.216 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:48:44.216Z,1537991324.216 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:48:44.216Z,1537991324.216 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:48:44.420Z,1537991324.420 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 3.610814 ppb
2018-09-26T19:48:44.632Z,1537991324.632 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:48:44.632Z,1537991324.632 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:48:45.035Z,1537991325.035 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:48:45.035Z,1537991325.035 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:48:45.035Z,1537991325.035 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:48:45.035Z,1537991325.035 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:48:50.153Z,1537991330.153 [Radio_Surface](INFO): Powering up
2018-09-26T19:48:53.029Z,1537991333.029 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:48:54.261Z,1537991334.261 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:48:54.481Z,1537991334.481 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:48:55.810Z,1537991335.810 [Radio_Surface](INFO): Powering down
2018-09-26T19:49:01.036Z,1537991341.036 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:49:01.036Z,1537991341.036 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:49:01.041Z,1537991341.041 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:49:01.154Z,1537991341.154 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 3.518520 ppb
2018-09-26T19:49:01.423Z,1537991341.423 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:49:01.423Z,1537991341.423 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:49:01.860Z,1537991341.860 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:49:01.860Z,1537991341.860 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:49:01.869Z,1537991341.869 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:49:01.870Z,1537991341.870 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:49:04.350Z,1537991344.350 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:49:04.769Z,1537991344.769 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:49:06.457Z,1537991346.457 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:49:07.709Z,1537991347.709 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:49:08.553Z,1537991348.553 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:49:12.156Z,1537991352.156 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T19:49:13.186Z,1537991353.186 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:49:13.609Z,1537991353.609 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:49:18.249Z,1537991358.249 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:49:19.501Z,1537991359.501 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:49:20.647Z,1537991360.647 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:49:20.647Z,1537991360.647 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:49:20.647Z,1537991360.647 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:49:20.761Z,1537991360.761 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:49:20.822Z,1537991360.822 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 3.645222 ppb
2018-09-26T19:49:21.064Z,1537991361.064 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:49:21.064Z,1537991361.064 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:49:21.423Z,1537991361.423 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:49:21.424Z,1537991361.424 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:49:21.424Z,1537991361.424 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:49:21.424Z,1537991361.424 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:49:22.021Z,1537991362.021 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:49:23.277Z,1537991363.277 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:49:23.698Z,1537991363.698 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:49:27.331Z,1537991367.331 [Radio_Surface](INFO): Powering up
2018-09-26T19:49:27.685Z,1537991367.685 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:49:29.127Z,1537991369.127 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for altitude
2018-09-26T19:49:29.127Z,1537991369.127 [RDI_Pathfinder](ERROR): Failed to parse:
:BD,     ,      +186.68,        +4.22,   0.00,170.00
2018-09-26T19:49:31.277Z,1537991371.277 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:49:32.537Z,1537991372.537 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:49:32.953Z,1537991372.953 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:49:33.133Z,1537991373.133 [RDI_Pathfinder](ERROR): Failed to parse:
68,-32768,-32768,-

2018-09-26T19:49:35.111Z,1537991375.111 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-26T19:49:35.111Z,1537991375.111 [RDI_Pathfinder](ERROR): Failed to parse:
:TS2552222,35.0, -0.1,   0.0,1448.9,  0
2018-09-26T19:49:37.169Z,1537991377.169 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:49:38.853Z,1537991378.853 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:49:42.645Z,1537991382.645 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:49:43.065Z,1537991383.065 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:49:46.751Z,1537991386.751 [Radio_Surface](INFO): Powering down
2018-09-26T19:49:47.489Z,1537991387.489 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T19:49:47.689Z,1537991387.689 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:49:48.949Z,1537991388.949 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:49:50.217Z,1537991390.217 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:49:50.819Z,1537991390.819 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:49:50.819Z,1537991390.819 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:49:50.819Z,1537991390.819 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:49:51.034Z,1537991391.034 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 3.425820 ppb
2018-09-26T19:49:51.227Z,1537991391.227 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:49:51.227Z,1537991391.227 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:49:51.580Z,1537991391.580 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:49:51.580Z,1537991391.580 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:49:51.589Z,1537991391.589 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:49:51.589Z,1537991391.589 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:49:55.115Z,1537991395.115 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-26T19:49:55.115Z,1537991395.115 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092612554222,35.0, -0.1,   0.0,1448:BI,-32768,-32768,-32768,-32768,V
2018-09-26T19:49:56.725Z,1537991396.725 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:50:01.550Z,1537991401.550 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint] Stopped
2018-09-26T19:50:01.550Z,1537991401.550 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-26T19:50:01.551Z,1537991401.551 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:B] Running Loop=1
2018-09-26T19:50:01.551Z,1537991401.551 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:B](DEBUG): Aggregate::initialize trackPatchFDOM:PatchDetectHorizontal:CrossLeg:B
2018-09-26T19:50:02.003Z,1537991402.003 [trackPatchFDOM:SurfaceComms] Running Loop=1
2018-09-26T19:50:02.003Z,1537991402.003 [trackPatchFDOM:SurfaceComms](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceComms
2018-09-26T19:50:02.003Z,1537991402.003 [trackPatchFDOM:SurfaceComms:SurfaceComms] Running Loop=1
2018-09-26T19:50:02.003Z,1537991402.003 [trackPatchFDOM:SurfaceComms:SurfaceComms](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceComms:SurfaceComms
2018-09-26T19:50:02.003Z,1537991402.003 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface] Running Loop=1
2018-09-26T19:50:02.003Z,1537991402.003 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-26T19:50:02.004Z,1537991402.004 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-26T19:50:02.004Z,1537991402.004 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-26T19:50:02.004Z,1537991402.004 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-26T19:50:02.009Z,1537991402.009 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-26T19:50:02.010Z,1537991402.010 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-26T19:50:03.673Z,1537991403.673 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:50:08.012Z,1537991408.012 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:50:08.012Z,1537991408.012 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:50:08.012Z,1537991408.012 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:50:08.142Z,1537991408.142 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 17.135989 ppb
2018-09-26T19:50:08.363Z,1537991408.363 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:50:08.364Z,1537991408.364 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:50:08.750Z,1537991408.750 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:50:08.750Z,1537991408.750 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:50:08.750Z,1537991408.750 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:50:08.750Z,1537991408.750 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:50:10.393Z,1537991410.393 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:50:11.661Z,1537991411.661 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:50:13.015Z,1537991413.015 [trackPatchFDOM:SurfaceComms:SurfaceComms:B] Running Loop=1
2018-09-26T19:50:13.016Z,1537991413.016 [trackPatchFDOM:SurfaceComms:SurfaceComms:B](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceComms:SurfaceComms:B
2018-09-26T19:50:13.016Z,1537991413.016 [trackPatchFDOM:SurfaceComms:SurfaceComms:B:A] Running Loop=1
2018-09-26T19:50:13.043Z,1537991413.043 [Radio_Surface](INFO): Powering up
2018-09-26T19:50:13.366Z,1537991413.366 [trackPatchFDOM:SurfaceComms:SurfaceComms:B] Stopped
2018-09-26T19:50:13.366Z,1537991413.366 [trackPatchFDOM:SurfaceComms:SurfaceComms:B](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceComms:SurfaceComms:B
2018-09-26T19:50:13.366Z,1537991413.366 [trackPatchFDOM:SurfaceComms:SurfaceComms:B:A] Stopped
2018-09-26T19:50:13.366Z,1537991413.366 [trackPatchFDOM:SurfaceComms:SurfaceComms:C] Running Loop=1
2018-09-26T19:50:13.366Z,1537991413.366 [trackPatchFDOM:SurfaceComms:SurfaceComms:C](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceComms:SurfaceComms:C
2018-09-26T19:50:13.366Z,1537991413.366 [trackPatchFDOM:SurfaceComms:SurfaceComms:C:A] Running Loop=1
2018-09-26T19:50:13.790Z,1537991413.790 [trackPatchFDOM:M.YoYo] Preempted
2018-09-26T19:50:13.791Z,1537991413.791 [trackPatchFDOM:L.DepthEnvelope] Preempted
2018-09-26T19:50:13.791Z,1537991413.791 [trackPatchFDOM:K.SetSpeed] Preempted
2018-09-26T19:50:13.791Z,1537991413.791 [trackPatchFDOM:Science] Preempted
2018-09-26T19:50:13.791Z,1537991413.791 [trackPatchFDOM:Science:A] Preempted
2018-09-26T19:50:13.791Z,1537991413.791 [trackPatchFDOM:Science:C] Preempted
2018-09-26T19:50:13.791Z,1537991413.791 [trackPatchFDOM:Science:Read_Oil] Preempted
2018-09-26T19:50:13.791Z,1537991413.791 [trackPatchFDOM:Science:PeakDetectFDOM] Preempted
2018-09-26T19:50:13.791Z,1537991413.791 [trackPatchFDOM:I.Buoyancy] Preempted
2018-09-26T19:50:13.791Z,1537991413.791 [trackPatchFDOM:H.Pitch] Preempted
2018-09-26T19:50:13.791Z,1537991413.791 [trackPatchFDOM:G.WaterDepthEnvelope] Preempted
2018-09-26T19:50:13.791Z,1537991413.791 [trackPatchFDOM:F.OffshoreEnvelope] Preempted
2018-09-26T19:50:14.065Z,1537991414.065 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-26T19:50:14.142Z,1537991414.142 [NAL9602](INFO): Powering up
2018-09-26T19:50:14.597Z,1537991414.597 [Aanderaa_O2](INFO): Powering down
2018-09-26T19:50:15.869Z,1537991415.869 [BuoyancyServo](ERROR): getPosition uart error serial timeout
2018-09-26T19:50:15.869Z,1537991415.869 [BuoyancyServo](FAULT): Buoyancy getPosition uart error.serial timeout
2018-09-26T19:50:15.869Z,1537991415.869 [BuoyancyServo] Communications Fault, FailCount= 1
2018-09-26T19:50:15.869Z,1537991415.869 [BuoyancyServo](ERROR): Communications Fault
2018-09-26T19:50:15.931Z,1537991415.931 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-09-26T19:50:16.053Z,1537991416.053 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-26T19:50:16.054Z,1537991416.054 [BuoyancyServo](INFO): Powering down
2018-09-26T19:50:17.596Z,1537991417.596 [BuoyancyServo](FAULT): LCB fault:  Current Limiter Activated.
2018-09-26T19:50:17.596Z,1537991417.596 [BuoyancyServo] Hardware Fault, FailCount= 1
2018-09-26T19:50:17.596Z,1537991417.596 [BuoyancyServo](ERROR): Hardware Fault
2018-09-26T19:50:18.041Z,1537991418.041 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-26T19:50:18.041Z,1537991418.041 [BuoyancyServo] No Fault, FailCount= 1
2018-09-26T19:50:18.423Z,1537991418.423 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-26T19:50:18.542Z,1537991418.542 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-26T19:50:22.760Z,1537991422.760 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T19:50:23.173Z,1537991423.173 [BuoyancyServo](ERROR): getPosition uart error serial timeout
2018-09-26T19:50:23.173Z,1537991423.173 [BuoyancyServo](FAULT): Buoyancy getPosition uart error.serial timeout
2018-09-26T19:50:23.173Z,1537991423.173 [BuoyancyServo] Communications Fault, FailCount= 2
2018-09-26T19:50:23.173Z,1537991423.173 [BuoyancyServo](ERROR): Communications Fault
2018-09-26T19:50:23.179Z,1537991423.179 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-09-26T19:50:23.308Z,1537991423.308 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-26T19:50:23.317Z,1537991423.317 [BuoyancyServo](INFO): Powering down
2018-09-26T19:50:24.904Z,1537991424.904 [BuoyancyServo](FAULT): LCB fault:  Current Limiter Activated.
2018-09-26T19:50:24.904Z,1537991424.904 [BuoyancyServo] Hardware Fault, FailCount= 2
2018-09-26T19:50:24.904Z,1537991424.904 [BuoyancyServo](ERROR): Hardware Fault
2018-09-26T19:50:25.211Z,1537991425.211 [NAL9602](INFO): NAL9602 initialized
2018-09-26T19:50:25.304Z,1537991425.304 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-26T19:50:25.304Z,1537991425.304 [BuoyancyServo] No Fault, FailCount= 2
2018-09-26T19:50:25.679Z,1537991425.679 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-26T19:50:25.794Z,1537991425.794 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-26T19:50:30.829Z,1537991430.829 [BuoyancyServo](ERROR): getPosition uart error serial timeout
2018-09-26T19:50:30.829Z,1537991430.829 [BuoyancyServo](FAULT): Buoyancy getPosition uart error.serial timeout
2018-09-26T19:50:30.829Z,1537991430.829 [BuoyancyServo] Communications Fault, FailCount= 3
2018-09-26T19:50:30.829Z,1537991430.829 [BuoyancyServo](ERROR): Communications Fault
2018-09-26T19:50:30.835Z,1537991430.835 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-09-26T19:50:31.003Z,1537991431.003 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-26T19:50:31.004Z,1537991431.004 [BuoyancyServo](INFO): Powering down
2018-09-26T19:50:32.947Z,1537991432.947 [BuoyancyServo](FAULT): LCB fault:  Current Limiter Activated.
2018-09-26T19:50:32.948Z,1537991432.948 [BuoyancyServo] Hardware Fault, FailCount= 3
2018-09-26T19:50:32.948Z,1537991432.948 [BuoyancyServo](ERROR): Hardware Fault
2018-09-26T19:50:33.345Z,1537991433.345 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-26T19:50:33.345Z,1537991433.345 [BuoyancyServo] No Fault, FailCount= 3
2018-09-26T19:50:33.777Z,1537991433.777 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-26T19:50:33.898Z,1537991433.898 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-26T19:50:44.064Z,1537991444.064 [NAL9602](INFO): SBD MO Status=0, MOMSN=1732, MT Status=0, MTMSN=0
2018-09-26T19:50:44.064Z,1537991444.064 [NAL9602](INFO): No messages in MT queue
2018-09-26T19:50:58.053Z,1537991458.053 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T19:51:33.253Z,1537991493.253 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T19:52:08.467Z,1537991528.467 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T19:52:18.204Z,1537991538.204 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.002564
2018-09-26T19:55:03.006Z,1537991703.006 [NAL9602](INFO): GPS fix at 20180926T195502: (36.813109, -121.825704)
2018-09-26T19:55:03.080Z,1537991703.080 [trackPatchFDOM:SurfaceComms:SurfaceComms:C:A] Stopped
2018-09-26T19:55:03.080Z,1537991703.080 [trackPatchFDOM:SurfaceComms:SurfaceComms:C:B] Running Loop=1
2018-09-26T19:55:07.663Z,1537991707.663 [DataOverHttps](INFO): Sending 63 bytes from file Logs/20180926T190706/Courier0024.lzma
2018-09-26T19:55:08.432Z,1537991708.432 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Courier0024.lzma.bak
2018-09-26T19:55:08.433Z,1537991708.433 [DataOverHttps](INFO): SBD MOMSN=8601526
2018-09-26T19:55:17.647Z,1537991717.647 [DataOverHttps](INFO): Sending 741 bytes from file Logs/20180926T190706/Express0025.lzma
2018-09-26T19:55:18.410Z,1537991718.410 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Express0025.lzma.bak
2018-09-26T19:55:18.411Z,1537991718.411 [DataOverHttps](INFO): SBD MOMSN=8601529
2018-09-26T19:55:19.131Z,1537991719.131 [trackPatchFDOM:SurfaceComms:SurfaceComms:C:B] Stopped
2018-09-26T19:55:19.131Z,1537991719.131 [trackPatchFDOM:SurfaceComms:SurfaceComms:C:C] Running Loop=1
2018-09-26T19:55:23.541Z,1537991723.541 [NAL9602](INFO): GPS fix at 20180926T195522: (36.813115, -121.825713)
2018-09-26T19:55:23.572Z,1537991723.572 [trackPatchFDOM:SurfaceComms:SurfaceComms:C:C] Stopped
2018-09-26T19:55:23.572Z,1537991723.572 [trackPatchFDOM:SurfaceComms:SurfaceComms:C](INFO): Completed trackPatchFDOM:SurfaceComms:SurfaceComms:C
2018-09-26T19:55:23.572Z,1537991723.572 [trackPatchFDOM:SurfaceComms:SurfaceComms:C] Stopped
2018-09-26T19:55:23.597Z,1537991723.597 [trackPatchFDOM:SurfaceComms:SurfaceComms:C](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceComms:SurfaceComms:C
2018-09-26T19:55:23.598Z,1537991723.598 [trackPatchFDOM:SurfaceComms:SurfaceComms](INFO): Completed trackPatchFDOM:SurfaceComms:SurfaceComms
2018-09-26T19:55:23.598Z,1537991723.598 [trackPatchFDOM:SurfaceComms:SurfaceComms] Stopped
2018-09-26T19:55:23.598Z,1537991723.598 [trackPatchFDOM:SurfaceComms:SurfaceComms](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceComms:SurfaceComms
2018-09-26T19:55:23.598Z,1537991723.598 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface] Stopped
2018-09-26T19:55:23.598Z,1537991723.598 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-26T19:55:23.598Z,1537991723.598 [trackPatchFDOM:SurfaceComms](INFO): Completed trackPatchFDOM:SurfaceComms
2018-09-26T19:55:23.599Z,1537991723.599 [trackPatchFDOM:SurfaceComms] Stopped
2018-09-26T19:55:23.599Z,1537991723.599 [trackPatchFDOM:SurfaceComms](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceComms
2018-09-26T19:55:23.996Z,1537991723.996 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:B](INFO): Completed trackPatchFDOM:PatchDetectHorizontal:CrossLeg:B
2018-09-26T19:55:23.996Z,1537991723.996 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:B] Stopped
2018-09-26T19:55:23.996Z,1537991723.996 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:B](DEBUG): Aggregate::uninitialize trackPatchFDOM:PatchDetectHorizontal:CrossLeg:B
2018-09-26T19:55:23.996Z,1537991723.996 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint] Running Loop=1
2018-09-26T19:55:23.996Z,1537991723.996 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-26T19:55:24.002Z,1537991724.002 [trackPatchFDOM:M.YoYo] Running Loop=1
2018-09-26T19:55:24.002Z,1537991724.002 [trackPatchFDOM:L.DepthEnvelope] Running Loop=1
2018-09-26T19:55:24.003Z,1537991724.003 [trackPatchFDOM:K.SetSpeed] Running Loop=1
2018-09-26T19:55:24.004Z,1537991724.004 [trackPatchFDOM:Science] Running Loop=1
2018-09-26T19:55:24.010Z,1537991724.010 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:55:24.010Z,1537991724.010 [trackPatchFDOM:Science:Read_Oil] Running Loop=1
2018-09-26T19:55:24.010Z,1537991724.010 [trackPatchFDOM:Science:C] Running Loop=1
2018-09-26T19:55:24.011Z,1537991724.011 [trackPatchFDOM:Science:A] Running Loop=1
2018-09-26T19:55:24.011Z,1537991724.011 [trackPatchFDOM:I.Buoyancy] Running Loop=1
2018-09-26T19:55:24.011Z,1537991724.011 [trackPatchFDOM:H.Pitch] Running Loop=1
2018-09-26T19:55:24.012Z,1537991724.012 [trackPatchFDOM:G.WaterDepthEnvelope] Running Loop=1
2018-09-26T19:55:24.012Z,1537991724.012 [trackPatchFDOM:F.OffshoreEnvelope] Running Loop=1
2018-09-26T19:55:24.060Z,1537991724.060 [CTD_NeilBrown](INFO): Opening uart, block timeout 10ths=4
2018-09-26T19:55:24.081Z,1537991724.081 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-26T19:55:24.081Z,1537991724.081 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-26T19:55:24.181Z,1537991724.181 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:55:24.585Z,1537991724.585 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:55:24.989Z,1537991724.989 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:55:25.401Z,1537991725.401 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:55:31.217Z,1537991731.217 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:55:31.913Z,1537991731.913 [Aanderaa_O2](DEBUG): Error parsing data: 4831F	648		349.165		108.063		13.827		29.343		30.571		39.699		9.129		364.9		788.5		373.1	



2018-09-26T19:55:31.913Z,1537991731.913 [Aanderaa_O2](DEBUG): Error parsing device response
2018-09-26T19:55:33.111Z,1537991733.111 [Aanderaa_O2](DEBUG): Error parsing data: 4831F	648		348.573		107.857		13.818		29.366		30.594		39.723		9.128		364.8		787.4		373.4	


2018-09-26T19:55:33.111Z,1537991733.111 [Aanderaa_O2](DEBUG): Error parsing device response
2018-09-26T19:55:34.313Z,1537991734.313 [Aanderaa_O2](DEBUG): Error parsing data: 4831F	648		348.791		107.934		13.821		29.358		30.586		39.716		9.130		364.6		784.8		373.2	



2018-09-26T19:55:34.313Z,1537991734.313 [Aanderaa_O2](DEBUG): Error parsing device response
2018-09-26T19:55:35.111Z,1537991735.111 [Aanderaa_O2](DEBUG): Error parsing data: 4831F	648		349.382		108.107		13.817		29.340		30.568		39.693		9.125		364.8		786.2		373.4	

2018-09-26T19:55:35.111Z,1537991735.111 [Aanderaa_O2](DEBUG): Error parsing device response
2018-09-26T19:55:37.297Z,1537991737.297 [BuoyancyServo](FAULT): Overload Error
2018-09-26T19:55:37.297Z,1537991737.297 [BuoyancyServo] Hardware Fault, FailCount= 1
2018-09-26T19:55:37.297Z,1537991737.297 [BuoyancyServo](ERROR): Hardware Fault
2018-09-26T19:55:37.451Z,1537991737.451 [CBIT](ERROR): Hardware Fault in component: BuoyancyServo
2018-09-26T19:55:37.626Z,1537991737.626 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-26T19:55:37.627Z,1537991737.627 [BuoyancyServo](INFO): Powering down
2018-09-26T19:55:39.693Z,1537991739.693 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-26T19:55:39.693Z,1537991739.693 [BuoyancyServo] No Fault, FailCount= 1
2018-09-26T19:55:40.051Z,1537991740.051 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-26T19:55:40.178Z,1537991740.178 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-26T19:55:40.269Z,1537991740.269 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:55:44.479Z,1537991744.479 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:55:44.494Z,1537991744.494 [Radio_Surface](INFO): Powering down
2018-09-26T19:55:49.584Z,1537991749.584 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:55:49.584Z,1537991749.584 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:55:49.584Z,1537991749.584 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:55:49.726Z,1537991749.726 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 15.413971 ppb
2018-09-26T19:55:49.984Z,1537991749.984 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:55:49.984Z,1537991749.984 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:55:50.399Z,1537991750.399 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:55:50.399Z,1537991750.399 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:55:50.399Z,1537991750.399 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:55:50.399Z,1537991750.399 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:55:53.249Z,1537991753.249 [CTD_NeilBrown](ERROR): Bad response:   0.75
2018-09-26T19:55:55.150Z,1537991755.150 [NAL9602](INFO): Powering down
2018-09-26T19:55:56.257Z,1537991756.257 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:55:58.993Z,1537991758.993 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:56:01.946Z,1537991761.946 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:56:04.885Z,1537991764.885 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:56:07.256Z,1537991767.256 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:56:07.256Z,1537991767.256 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:56:07.256Z,1537991767.256 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:56:07.336Z,1537991767.336 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 4.270230 ppb
2018-09-26T19:56:07.682Z,1537991767.682 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:56:07.682Z,1537991767.682 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:56:08.067Z,1537991768.067 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:56:08.067Z,1537991768.067 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:56:08.067Z,1537991768.067 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:56:08.068Z,1537991768.068 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:56:11.986Z,1537991771.986 [Radio_Surface](INFO): Powering up
2018-09-26T19:56:16.877Z,1537991776.877 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:56:18.145Z,1537991778.145 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:56:18.565Z,1537991778.565 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:56:20.457Z,1537991780.457 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:56:22.495Z,1537991782.495 [Radio_Surface](INFO): Powering down
2018-09-26T19:56:23.189Z,1537991783.189 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:56:23.562Z,1537991783.562 [DataOverHttps](INFO): setting unavailable, lastComms_.elapsed()=60.036522
2018-09-26T19:56:24.877Z,1537991784.877 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:56:26.832Z,1537991786.832 [RDI_Pathfinder](ERROR): Failed to parse:
:HM,G,D,0e8d,0fff, 15.309, -0.052, 0.000
2018-09-26T19:56:26.886Z,1537991786.886 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:56:26.887Z,1537991786.887 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:56:26.887Z,1537991786.887 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:56:27.058Z,1537991787.058 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 5.107762 ppb
2018-09-26T19:56:27.232Z,1537991787.232 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:56:27.232Z,1537991787.232 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:56:27.644Z,1537991787.644 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:56:27.644Z,1537991787.644 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:56:27.645Z,1537991787.645 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:56:27.645Z,1537991787.645 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:56:29.077Z,1537991789.077 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:56:30.337Z,1537991790.337 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:56:33.698Z,1537991793.698 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:56:34.537Z,1537991794.537 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:56:37.265Z,1537991797.265 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:56:39.377Z,1537991799.377 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:56:44.047Z,1537991804.047 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:56:44.047Z,1537991804.047 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:56:44.047Z,1537991804.047 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:56:44.162Z,1537991804.162 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 3.906721 ppb
2018-09-26T19:56:44.432Z,1537991804.432 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](INFO): Initialize.
2018-09-26T19:56:44.437Z,1537991804.437 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal] Stopped
2018-09-26T19:56:44.437Z,1537991804.437 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-26T19:56:44.437Z,1537991804.437 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:B] Running Loop=1
2018-09-26T19:56:44.449Z,1537991804.449 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:56:44.449Z,1537991804.449 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:56:44.831Z,1537991804.831 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:B](IMPORTANT): Fell below OffPeakFraction. Patch value is 10.481988 ppb at lat = 36.812665 arcdeg , lon = -121.825675 arcdeg , dep = 2.932788 m , distance = 92.908508 m 
2018-09-26T19:56:44.832Z,1537991804.832 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:B] Stopped
2018-09-26T19:56:44.832Z,1537991804.832 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:C] Running Loop=1
2018-09-26T19:56:44.840Z,1537991804.840 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:56:44.840Z,1537991804.840 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:56:44.840Z,1537991804.840 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:56:44.840Z,1537991804.840 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:56:45.275Z,1537991805.275 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:C] Stopped
2018-09-26T19:56:45.275Z,1537991805.275 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:AssignPatchDetectOff] Running Loop=1
2018-09-26T19:56:45.640Z,1537991805.640 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:AssignPatchDetectOff] Stopped
2018-09-26T19:56:45.640Z,1537991805.640 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection](INFO): Completed trackPatchFDOM:PatchDetectHorizontal:PatchDetection
2018-09-26T19:56:45.640Z,1537991805.640 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection] Stopped
2018-09-26T19:56:45.640Z,1537991805.640 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection](DEBUG): Aggregate::uninitialize trackPatchFDOM:PatchDetectHorizontal:PatchDetection
2018-09-26T19:56:46.016Z,1537991806.016 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg] Stopped
2018-09-26T19:56:46.016Z,1537991806.016 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg](DEBUG): Aggregate::uninitialize trackPatchFDOM:PatchDetectHorizontal:CrossLeg
2018-09-26T19:56:46.016Z,1537991806.016 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint] Stopped
2018-09-26T19:56:46.016Z,1537991806.016 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-26T19:56:46.018Z,1537991806.018 [trackPatchFDOM:PatchDetectHorizontal:AssignWpBearingForInLeg] Running Loop=1
2018-09-26T19:56:46.435Z,1537991806.435 [trackPatchFDOM:PatchDetectHorizontal:AssignWpBearingForInLeg] Stopped
2018-09-26T19:56:46.435Z,1537991806.435 [trackPatchFDOM:PatchDetectHorizontal:F] Running Loop=1
2018-09-26T19:56:46.904Z,1537991806.904 [trackPatchFDOM:PatchDetectHorizontal:F](IMPORTANT): Next: bearing for InLeg: 306.000000 arcdeg . Current lat, lon = 36.812730 arcdeg , -121.824992 arcdeg . Patch value is 10.481988 ppb at lat = 36.812665 arcdeg , lon = -121.825675 arcdeg , dep = 2.932788 m , distance = 92.908508 m 
2018-09-26T19:56:46.904Z,1537991806.904 [trackPatchFDOM:PatchDetectHorizontal:F] Stopped
2018-09-26T19:56:46.913Z,1537991806.913 [trackPatchFDOM:PatchDetectHorizontal:InLegWp.Waypoint] Running Loop=1
2018-09-26T19:56:46.913Z,1537991806.913 [trackPatchFDOM:PatchDetectHorizontal:InLegWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-26T19:56:49.193Z,1537991809.193 [Radio_Surface](INFO): Powering up
2018-09-26T19:56:50.725Z,1537991810.725 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:56:51.985Z,1537991811.985 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:56:54.851Z,1537991814.851 [Radio_Surface](INFO): Powering down
2018-09-26T19:56:58.055Z,1537991818.055 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:56:58.055Z,1537991818.055 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:56:58.055Z,1537991818.055 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:56:58.110Z,1537991818.110 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 2.328810 ppb
2018-09-26T19:56:58.452Z,1537991818.452 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:56:58.452Z,1537991818.452 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:56:58.874Z,1537991818.874 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:56:58.874Z,1537991818.874 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:56:58.874Z,1537991818.874 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:56:58.874Z,1537991818.874 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:56:59.563Z,1537991819.563 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T19:57:07.117Z,1537991827.117 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:57:11.117Z,1537991831.117 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:57:13.205Z,1537991833.205 [RDI_Pathfinder](ERROR): Failed to parse:
   +10.00,      +186.68,        +4.22,   0.00,633.98
2018-09-26T19:57:17.421Z,1537991837.421 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:57:18.452Z,1537991838.452 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:57:18.452Z,1537991838.452 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:57:18.452Z,1537991838.452 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:57:18.575Z,1537991838.575 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 2.281449 ppb
2018-09-26T19:57:18.868Z,1537991838.868 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:57:18.868Z,1537991838.868 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:57:19.238Z,1537991839.238 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:57:19.238Z,1537991839.238 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:57:19.238Z,1537991839.238 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:57:19.238Z,1537991839.238 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:57:21.649Z,1537991841.649 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:57:22.469Z,1537991842.469 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:57:23.729Z,1537991843.729 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:57:25.570Z,1537991845.570 [Radio_Surface](INFO): Powering up
2018-09-26T19:57:27.517Z,1537991847.517 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:57:30.461Z,1537991850.461 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:57:31.226Z,1537991851.226 [Radio_Surface](INFO): Powering down
2018-09-26T19:57:33.821Z,1537991853.821 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:57:34.095Z,1537991854.095 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:57:34.095Z,1537991854.095 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:57:34.095Z,1537991854.095 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:57:34.232Z,1537991854.232 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 2.779758 ppb
2018-09-26T19:57:34.482Z,1537991854.482 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:57:34.483Z,1537991854.483 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:57:34.801Z,1537991854.801 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T19:57:34.873Z,1537991854.873 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:57:34.873Z,1537991854.873 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:57:34.873Z,1537991854.873 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:57:34.873Z,1537991854.873 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:57:35.501Z,1537991855.501 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:57:37.194Z,1537991857.194 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:57:38.021Z,1537991858.021 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:57:39.001Z,1537991859.001 [CTD_NeilBrown](ERROR): Bad response:   0.32
2018-09-26T19:57:41.585Z,1537991861.585 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:57:44.529Z,1537991864.529 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:57:45.369Z,1537991865.369 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:57:47.465Z,1537991867.465 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:57:50.617Z,1537991870.617 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:57:56.725Z,1537991876.725 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:57:58.074Z,1537991878.074 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:57:58.074Z,1537991878.074 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:57:58.075Z,1537991878.075 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:57:58.136Z,1537991878.136 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 2.611765 ppb
2018-09-26T19:57:58.463Z,1537991878.463 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:57:58.463Z,1537991878.463 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:57:58.880Z,1537991878.880 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:57:58.880Z,1537991878.880 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:57:58.880Z,1537991878.880 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:57:58.880Z,1537991878.880 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:57:59.865Z,1537991879.865 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:58:00.285Z,1537991880.285 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:58:01.973Z,1537991881.973 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:58:03.562Z,1537991883.562 [Radio_Surface](INFO): Powering up
2018-09-26T19:58:03.653Z,1537991883.653 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:58:09.238Z,1537991889.238 [Radio_Surface](INFO): Powering down
2018-09-26T19:58:09.994Z,1537991889.994 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T19:58:10.455Z,1537991890.455 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:58:10.456Z,1537991890.456 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:58:10.456Z,1537991890.456 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:58:10.593Z,1537991890.593 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:58:10.689Z,1537991890.689 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 3.524590 ppb
2018-09-26T19:58:10.886Z,1537991890.886 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:58:10.887Z,1537991890.887 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:58:11.009Z,1537991891.009 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:58:11.274Z,1537991891.274 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:58:11.274Z,1537991891.274 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:58:11.275Z,1537991891.275 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:58:11.275Z,1537991891.275 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:58:11.853Z,1537991891.853 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:58:13.533Z,1537991893.533 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:58:14.373Z,1537991894.373 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:58:20.090Z,1537991900.090 [trackPatchFDOM:PatchDetectHorizontal:InLegWp.Waypoint] Stopped
2018-09-26T19:58:20.090Z,1537991900.090 [trackPatchFDOM:PatchDetectHorizontal:InLegWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-26T19:58:20.090Z,1537991900.090 [trackPatchFDOM:PatchDetectHorizontal:AssignWpBearingForOutLeg] Running Loop=1
2018-09-26T19:58:20.479Z,1537991900.479 [trackPatchFDOM:PatchDetectHorizontal:AssignWpBearingForOutLeg] Stopped
2018-09-26T19:58:20.479Z,1537991900.479 [trackPatchFDOM:PatchDetectHorizontal:I] Running Loop=1
2018-09-26T19:58:20.887Z,1537991900.887 [trackPatchFDOM:PatchDetectHorizontal:I](IMPORTANT): Next: bearing for OutLeg: 162.000000 arcdeg . WpMaxDistance = 200.000000 m . Current lat, lon = 36.812956 arcdeg , -121.825514 arcdeg . Patch value is 10.481988 ppb at lat = 36.812665 arcdeg , lon = -121.825675 arcdeg , dep = 2.932788 m , distance = 92.908508 m 
2018-09-26T19:58:20.887Z,1537991900.887 [trackPatchFDOM:PatchDetectHorizontal:I] Stopped
2018-09-26T19:58:20.887Z,1537991900.887 [trackPatchFDOM:PatchDetectHorizontal:J] Running Loop=1
2018-09-26T19:58:20.888Z,1537991900.888 [trackPatchFDOM:PatchDetectHorizontal:J](DEBUG): Aggregate::initialize trackPatchFDOM:PatchDetectHorizontal:J
2018-09-26T19:58:21.273Z,1537991901.273 [trackPatchFDOM:SurfaceCommsSplit] Running Loop=1
2018-09-26T19:58:21.274Z,1537991901.274 [trackPatchFDOM:SurfaceCommsSplit](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceCommsSplit
2018-09-26T19:58:21.274Z,1537991901.274 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface] Running Loop=1
2018-09-26T19:58:21.274Z,1537991901.274 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-26T19:58:21.274Z,1537991901.274 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-26T19:58:21.275Z,1537991901.275 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-26T19:58:21.275Z,1537991901.275 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-26T19:58:21.275Z,1537991901.275 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-26T19:58:21.276Z,1537991901.276 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-26T19:58:22.565Z,1537991902.565 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:58:27.817Z,1537991907.817 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T19:58:27.865Z,1537991907.865 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T19:58:27.865Z,1537991907.865 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T19:58:27.865Z,1537991907.865 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T19:58:27.982Z,1537991907.982 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 3.489777 ppb
2018-09-26T19:58:28.279Z,1537991908.279 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T19:58:28.279Z,1537991908.279 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:58:28.664Z,1537991908.664 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T19:58:28.664Z,1537991908.664 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T19:58:28.664Z,1537991908.664 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T19:58:28.664Z,1537991908.664 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T19:58:31.077Z,1537991911.077 [trackPatchFDOM:SurfaceCommsSplit:B] Running Loop=1
2018-09-26T19:58:31.078Z,1537991911.078 [trackPatchFDOM:SurfaceCommsSplit:B](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceCommsSplit:B
2018-09-26T19:58:31.078Z,1537991911.078 [trackPatchFDOM:SurfaceCommsSplit:B:A] Running Loop=1
2018-09-26T19:58:31.458Z,1537991911.458 [trackPatchFDOM:SurfaceCommsSplit:B:A](INFO): ##UnpackSplit##
2018-09-26T19:58:31.458Z,1537991911.458 [trackPatchFDOM:SurfaceCommsSplit:B:A] Stopped
2018-09-26T19:58:31.458Z,1537991911.458 [trackPatchFDOM:SurfaceCommsSplit:B](INFO): Completed trackPatchFDOM:SurfaceCommsSplit:B
2018-09-26T19:58:31.458Z,1537991911.458 [trackPatchFDOM:SurfaceCommsSplit:B] Stopped
2018-09-26T19:58:31.458Z,1537991911.458 [trackPatchFDOM:SurfaceCommsSplit:B](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceCommsSplit:B
2018-09-26T19:58:31.459Z,1537991911.459 [trackPatchFDOM:SurfaceCommsSplit:C] Running Loop=1
2018-09-26T19:58:31.459Z,1537991911.459 [trackPatchFDOM:SurfaceCommsSplit:C](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceCommsSplit:C
2018-09-26T19:58:31.459Z,1537991911.459 [trackPatchFDOM:SurfaceCommsSplit:C:A] Running Loop=1
2018-09-26T19:58:31.470Z,1537991911.470 [Radio_Surface](INFO): Powering up
2018-09-26T19:58:31.867Z,1537991911.867 [trackPatchFDOM:M.YoYo] Preempted
2018-09-26T19:58:31.867Z,1537991911.867 [trackPatchFDOM:L.DepthEnvelope] Preempted
2018-09-26T19:58:31.867Z,1537991911.867 [trackPatchFDOM:K.SetSpeed] Preempted
2018-09-26T19:58:31.867Z,1537991911.867 [trackPatchFDOM:Science] Preempted
2018-09-26T19:58:31.867Z,1537991911.867 [trackPatchFDOM:Science:A] Preempted
2018-09-26T19:58:31.867Z,1537991911.867 [trackPatchFDOM:Science:C] Preempted
2018-09-26T19:58:31.867Z,1537991911.867 [trackPatchFDOM:Science:Read_Oil] Preempted
2018-09-26T19:58:31.867Z,1537991911.867 [trackPatchFDOM:Science:PeakDetectFDOM] Preempted
2018-09-26T19:58:31.867Z,1537991911.867 [trackPatchFDOM:I.Buoyancy] Preempted
2018-09-26T19:58:31.867Z,1537991911.867 [trackPatchFDOM:H.Pitch] Preempted
2018-09-26T19:58:31.867Z,1537991911.867 [trackPatchFDOM:G.WaterDepthEnvelope] Preempted
2018-09-26T19:58:31.867Z,1537991911.867 [trackPatchFDOM:F.OffshoreEnvelope] Preempted
2018-09-26T19:58:32.185Z,1537991912.185 [NAL9602](INFO): Powering up
2018-09-26T19:58:32.265Z,1537991912.265 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-26T19:58:32.677Z,1537991912.677 [Aanderaa_O2](INFO): Powering down
2018-09-26T19:58:34.033Z,1537991914.033 [BuoyancyServo](ERROR): getPosition uart error serial timeout
2018-09-26T19:58:34.033Z,1537991914.033 [BuoyancyServo](FAULT): Buoyancy getPosition uart error.serial timeout
2018-09-26T19:58:34.033Z,1537991914.033 [BuoyancyServo] Communications Fault, FailCount= 1
2018-09-26T19:58:34.033Z,1537991914.033 [BuoyancyServo](ERROR): Communications Fault
2018-09-26T19:58:34.194Z,1537991914.194 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-09-26T19:58:34.295Z,1537991914.295 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-26T19:58:34.296Z,1537991914.296 [BuoyancyServo](INFO): Powering down
2018-09-26T19:58:35.895Z,1537991915.895 [BuoyancyServo](FAULT): LCB fault:  Current Limiter Activated.
2018-09-26T19:58:35.895Z,1537991915.895 [BuoyancyServo] Hardware Fault, FailCount= 1
2018-09-26T19:58:35.895Z,1537991915.895 [BuoyancyServo](ERROR): Hardware Fault
2018-09-26T19:58:36.315Z,1537991916.315 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-26T19:58:36.315Z,1537991916.315 [BuoyancyServo] No Fault, FailCount= 1
2018-09-26T19:58:36.682Z,1537991916.682 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-26T19:58:36.802Z,1537991916.802 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-26T19:58:41.389Z,1537991921.389 [BuoyancyServo](ERROR): getPosition uart error serial timeout
2018-09-26T19:58:41.389Z,1537991921.389 [BuoyancyServo](FAULT): Buoyancy getPosition uart error.serial timeout
2018-09-26T19:58:41.389Z,1537991921.389 [BuoyancyServo] Communications Fault, FailCount= 2
2018-09-26T19:58:41.389Z,1537991921.389 [BuoyancyServo](ERROR): Communications Fault
2018-09-26T19:58:41.395Z,1537991921.395 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-09-26T19:58:41.514Z,1537991921.514 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-26T19:58:41.515Z,1537991921.515 [BuoyancyServo](INFO): Powering down
2018-09-26T19:58:43.022Z,1537991923.022 [NAL9602](INFO): NAL9602 initialized
2018-09-26T19:58:43.103Z,1537991923.103 [BuoyancyServo](FAULT): LCB fault:  Current Limiter Activated.
2018-09-26T19:58:43.103Z,1537991923.103 [BuoyancyServo] Hardware Fault, FailCount= 2
2018-09-26T19:58:43.103Z,1537991923.103 [BuoyancyServo](ERROR): Hardware Fault
2018-09-26T19:58:43.484Z,1537991923.484 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-26T19:58:43.484Z,1537991923.484 [BuoyancyServo] No Fault, FailCount= 2
2018-09-26T19:58:43.926Z,1537991923.926 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-26T19:58:44.046Z,1537991924.046 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-26T19:58:45.417Z,1537991925.417 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T19:59:11.424Z,1537991951.424 [NAL9602](INFO): SBD MO Status=0, MOMSN=1733, MT Status=0, MTMSN=0
2018-09-26T19:59:11.424Z,1537991951.424 [NAL9602](INFO): No messages in MT queue
2018-09-26T19:59:20.617Z,1537991960.617 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T19:59:55.418Z,1537991995.418 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T20:00:31.016Z,1537992031.016 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T20:01:05.816Z,1537992065.816 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T20:01:24.368Z,1537992084.368 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.002609
2018-09-26T20:02:26.410Z,1537992146.410 [RDI_Pathfinder](ERROR): Failed to parse:
:BS,-32768,-32768,-32768,V
2018-09-26T20:03:37.216Z,1537992217.216 [NAL9602](INFO): GPS fix at 20180926T200333: (36.813145, -121.826238)
2018-09-26T20:03:37.323Z,1537992217.323 [trackPatchFDOM:SurfaceCommsSplit:C:A] Stopped
2018-09-26T20:03:37.324Z,1537992217.324 [trackPatchFDOM:SurfaceCommsSplit:C:B] Running Loop=1
2018-09-26T20:03:42.517Z,1537992222.517 [DataOverHttps](INFO): Sending 62 bytes from file Logs/20180926T190706/Courier0027.lzma
2018-09-26T20:03:43.278Z,1537992223.278 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Courier0027.lzma.bak
2018-09-26T20:03:43.278Z,1537992223.278 [DataOverHttps](INFO): SBD MOMSN=8601542
2018-09-26T20:03:49.858Z,1537992229.858 [CommandLine](IMPORTANT): got command show stack
2018-09-26T20:03:49.858Z,1537992229.858 [CommandLine](IMPORTANT): Behavior Stack:

2018-09-26T20:03:49.859Z,1537992229.859 [trackPatchFDOM](IMPORTANT): Priority 0: trackPatchFDOM:A.AltitudeEnvelope
2018-09-26T20:03:49.859Z,1537992229.859 [trackPatchFDOM](IMPORTANT): Priority 1: trackPatchFDOM:B.DepthEnvelope
2018-09-26T20:03:49.859Z,1537992229.859 [trackPatchFDOM:SurfaceCommsSplit](IMPORTANT): Priority 2: trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface
2018-09-26T20:03:49.860Z,1537992229.860 [trackPatchFDOM:SurfaceCommsSplit:C](IMPORTANT): Priority 3: trackPatchFDOM:SurfaceCommsSplit:C:B
2018-09-26T20:03:53.578Z,1537992233.578 [DataOverHttps](INFO): Sending 728 bytes from file Logs/20180926T190706/Express0028.lzma
2018-09-26T20:03:54.339Z,1537992234.339 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Express0028.lzma.bak
2018-09-26T20:03:54.339Z,1537992234.339 [DataOverHttps](INFO): SBD MOMSN=8601545
2018-09-26T20:03:55.117Z,1537992235.117 [trackPatchFDOM:SurfaceCommsSplit:C:B] Stopped
2018-09-26T20:03:55.117Z,1537992235.117 [trackPatchFDOM:SurfaceCommsSplit:C:C] Running Loop=1
2018-09-26T20:03:59.379Z,1537992239.379 [NAL9602](INFO): GPS fix at 20180926T200359: (36.813143, -121.826261)
2018-09-26T20:03:59.447Z,1537992239.447 [trackPatchFDOM:SurfaceCommsSplit:C:C] Stopped
2018-09-26T20:03:59.448Z,1537992239.448 [trackPatchFDOM:SurfaceCommsSplit:C](INFO): Completed trackPatchFDOM:SurfaceCommsSplit:C
2018-09-26T20:03:59.448Z,1537992239.448 [trackPatchFDOM:SurfaceCommsSplit:C] Stopped
2018-09-26T20:03:59.448Z,1537992239.448 [trackPatchFDOM:SurfaceCommsSplit:C](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceCommsSplit:C
2018-09-26T20:03:59.449Z,1537992239.449 [trackPatchFDOM:SurfaceCommsSplit](INFO): Completed trackPatchFDOM:SurfaceCommsSplit
2018-09-26T20:03:59.449Z,1537992239.449 [trackPatchFDOM:SurfaceCommsSplit] Stopped
2018-09-26T20:03:59.449Z,1537992239.449 [trackPatchFDOM:SurfaceCommsSplit](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceCommsSplit
2018-09-26T20:03:59.449Z,1537992239.449 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface] Stopped
2018-09-26T20:03:59.449Z,1537992239.449 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-26T20:03:59.845Z,1537992239.845 [trackPatchFDOM:PatchDetectHorizontal:J](INFO): Completed trackPatchFDOM:PatchDetectHorizontal:J
2018-09-26T20:03:59.845Z,1537992239.845 [trackPatchFDOM:PatchDetectHorizontal:J] Stopped
2018-09-26T20:03:59.845Z,1537992239.845 [trackPatchFDOM:PatchDetectHorizontal:J](DEBUG): Aggregate::uninitialize trackPatchFDOM:PatchDetectHorizontal:J
2018-09-26T20:03:59.845Z,1537992239.845 [trackPatchFDOM:PatchDetectHorizontal:AssignPatchDetectOnForOutLeg] Running Loop=1
2018-09-26T20:03:59.845Z,1537992239.845 [trackPatchFDOM:M.YoYo] Running Loop=1
2018-09-26T20:03:59.846Z,1537992239.846 [trackPatchFDOM:L.DepthEnvelope] Running Loop=1
2018-09-26T20:03:59.847Z,1537992239.847 [trackPatchFDOM:K.SetSpeed] Running Loop=1
2018-09-26T20:03:59.847Z,1537992239.847 [trackPatchFDOM:Science] Running Loop=1
2018-09-26T20:03:59.850Z,1537992239.850 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T20:03:59.850Z,1537992239.850 [trackPatchFDOM:Science:Read_Oil] Running Loop=1
2018-09-26T20:03:59.850Z,1537992239.850 [trackPatchFDOM:Science:C] Running Loop=1
2018-09-26T20:03:59.850Z,1537992239.850 [trackPatchFDOM:Science:A] Running Loop=1
2018-09-26T20:03:59.851Z,1537992239.851 [trackPatchFDOM:I.Buoyancy] Running Loop=1
2018-09-26T20:03:59.851Z,1537992239.851 [trackPatchFDOM:H.Pitch] Running Loop=1
2018-09-26T20:03:59.851Z,1537992239.851 [trackPatchFDOM:G.WaterDepthEnvelope] Running Loop=1
2018-09-26T20:03:59.852Z,1537992239.852 [trackPatchFDOM:F.OffshoreEnvelope] Running Loop=1
2018-09-26T20:03:59.937Z,1537992239.937 [CTD_NeilBrown](INFO): Opening uart, block timeout 10ths=4
2018-09-26T20:04:00.061Z,1537992240.061 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:04:00.094Z,1537992240.094 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-26T20:04:00.095Z,1537992240.095 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-26T20:04:00.300Z,1537992240.300 [trackPatchFDOM:PatchDetectHorizontal:AssignPatchDetectOnForOutLeg] Stopped
2018-09-26T20:04:00.301Z,1537992240.301 [trackPatchFDOM:PatchDetectHorizontal:OutLeg] Running Loop=1
2018-09-26T20:04:00.301Z,1537992240.301 [trackPatchFDOM:PatchDetectHorizontal:OutLeg](DEBUG): Aggregate::initialize trackPatchFDOM:PatchDetectHorizontal:OutLeg
2018-09-26T20:04:00.301Z,1537992240.301 [trackPatchFDOM:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint] Running Loop=1
2018-09-26T20:04:00.301Z,1537992240.301 [trackPatchFDOM:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-26T20:04:00.469Z,1537992240.469 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:04:00.735Z,1537992240.735 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection] Running Loop=1
2018-09-26T20:04:00.735Z,1537992240.735 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection](DEBUG): Aggregate::initialize trackPatchFDOM:PatchDetectHorizontal:PatchDetection
2018-09-26T20:04:00.735Z,1537992240.735 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal] Running Loop=1
2018-09-26T20:04:00.735Z,1537992240.735 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](INFO): Initialize.
2018-09-26T20:04:00.877Z,1537992240.877 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:04:01.285Z,1537992241.285 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:04:01.625Z,1537992241.625 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:04:02.045Z,1537992242.045 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:04:07.749Z,1537992247.749 [Aanderaa_O2](DEBUG): Error parsing data: 4831F	648		347.441		107.450		13.793		29.414		30.642		39.749		9.106		366.0		788.3		374.2	



2018-09-26T20:04:07.750Z,1537992247.750 [Aanderaa_O2](DEBUG): Error parsing device response
2018-09-26T20:04:08.947Z,1537992248.947 [Aanderaa_O2](DEBUG): Error parsing data: 4831F	648		348.327		107.733		13.797		29.384		30.612		39.720		9.109		365.9		786.1		374.0	



2018-09-26T20:04:08.947Z,1537992248.947 [Aanderaa_O2](DEBUG): Error parsing device response
2018-09-26T20:04:10.150Z,1537992250.150 [Aanderaa_O2](DEBUG): Error parsing data: 4831F	648		346.927		107.295		13.795		29.430		30.658		39.761		9.103		365.9		787.2		374.1	

2018-09-26T20:04:10.150Z,1537992250.150 [Aanderaa_O2](DEBUG): Error parsing device response
2018-09-26T20:04:11.794Z,1537992251.794 [Aanderaa_O2](DEBUG): Error parsing data: 4831F	648		347.995		107.650		13.806		29.391		30.619		39.724		9.106		365.8		786.7		373.8	

2018-09-26T20:04:11.794Z,1537992251.794 [Aanderaa_O2](DEBUG): Error parsing device response
2018-09-26T20:04:16.365Z,1537992256.365 [BuoyancyServo](FAULT): Overload Error
2018-09-26T20:04:16.365Z,1537992256.365 [BuoyancyServo] Hardware Fault, FailCount= 1
2018-09-26T20:04:16.365Z,1537992256.365 [BuoyancyServo](ERROR): Hardware Fault
2018-09-26T20:04:16.461Z,1537992256.461 [CBIT](ERROR): Hardware Fault in component: BuoyancyServo
2018-09-26T20:04:16.724Z,1537992256.724 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-26T20:04:16.730Z,1537992256.730 [BuoyancyServo](INFO): Powering down
2018-09-26T20:04:18.445Z,1537992258.445 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:04:18.657Z,1537992258.657 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:04:18.861Z,1537992258.861 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-26T20:04:18.861Z,1537992258.861 [BuoyancyServo] No Fault, FailCount= 1
2018-09-26T20:04:19.151Z,1537992259.151 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-26T20:04:19.270Z,1537992259.270 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-26T20:04:22.218Z,1537992262.218 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:04:26.858Z,1537992266.858 [Radio_Surface](INFO): Powering down
2018-09-26T20:04:27.701Z,1537992267.701 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:04:28.117Z,1537992268.117 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:04:29.805Z,1537992269.805 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:04:31.013Z,1537992271.013 [NAL9602](INFO): Powering down
2018-09-26T20:04:34.345Z,1537992274.345 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T20:04:34.346Z,1537992274.346 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T20:04:34.346Z,1537992274.346 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T20:04:34.518Z,1537992274.518 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 3.478039 ppb
2018-09-26T20:04:34.668Z,1537992274.668 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T20:04:34.668Z,1537992274.668 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:04:35.107Z,1537992275.107 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T20:04:35.107Z,1537992275.107 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:04:35.107Z,1537992275.107 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T20:04:35.107Z,1537992275.107 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T20:04:35.881Z,1537992275.881 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:04:36.094Z,1537992276.094 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:04:36.521Z,1537992276.521 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:04:37.359Z,1537992277.359 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:04:38.613Z,1537992278.613 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:04:47.153Z,1537992287.153 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-26T20:04:47.153Z,1537992287.153 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092613103422,35.0, -0.1,   09,  0
2018-09-26T20:04:50.797Z,1537992290.797 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:04:52.406Z,1537992292.406 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T20:04:52.407Z,1537992292.407 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T20:04:52.407Z,1537992292.407 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T20:04:52.580Z,1537992292.580 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 3.606765 ppb
2018-09-26T20:04:52.816Z,1537992292.816 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T20:04:52.816Z,1537992292.816 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:04:53.207Z,1537992293.207 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T20:04:53.208Z,1537992293.208 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:04:53.208Z,1537992293.208 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T20:04:53.208Z,1537992293.208 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T20:04:56.265Z,1537992296.265 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:04:57.105Z,1537992297.105 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:04:57.525Z,1537992297.525 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:04:59.506Z,1537992299.506 [DataOverHttps](INFO): setting unavailable, lastComms_.elapsed()=60.140247
2018-09-26T20:05:01.309Z,1537992301.309 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:05:03.613Z,1537992303.613 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:05:07.295Z,1537992307.295 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T20:05:07.295Z,1537992307.295 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T20:05:07.296Z,1537992307.296 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T20:05:07.414Z,1537992307.414 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 5.233658 ppb
2018-09-26T20:05:07.635Z,1537992307.635 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T20:05:07.636Z,1537992307.636 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:05:08.032Z,1537992308.032 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T20:05:08.032Z,1537992308.032 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:05:08.032Z,1537992308.032 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T20:05:08.032Z,1537992308.032 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T20:05:13.489Z,1537992313.489 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:05:16.011Z,1537992316.011 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:05:16.429Z,1537992316.429 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:05:16.497Z,1537992316.497 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T20:05:16.497Z,1537992316.497 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T20:05:16.497Z,1537992316.497 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T20:05:16.611Z,1537992316.611 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 4.948275 ppb
2018-09-26T20:05:16.841Z,1537992316.841 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:05:16.902Z,1537992316.902 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T20:05:16.902Z,1537992316.902 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:05:17.273Z,1537992317.273 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:05:17.284Z,1537992317.284 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T20:05:17.284Z,1537992317.284 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:05:17.284Z,1537992317.284 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T20:05:17.284Z,1537992317.284 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T20:05:18.529Z,1537992318.529 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:05:19.838Z,1537992319.838 [Radio_Surface](INFO): Powering up
2018-09-26T20:05:24.001Z,1537992324.001 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:05:25.498Z,1537992325.498 [Radio_Surface](INFO): Powering down
2018-09-26T20:05:29.699Z,1537992329.699 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T20:05:29.700Z,1537992329.700 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T20:05:29.700Z,1537992329.700 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T20:05:29.803Z,1537992329.803 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 4.957584 ppb
2018-09-26T20:05:30.120Z,1537992330.120 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T20:05:30.120Z,1537992330.120 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:05:30.485Z,1537992330.485 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T20:05:30.485Z,1537992330.485 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:05:30.485Z,1537992330.485 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T20:05:30.485Z,1537992330.485 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T20:05:33.673Z,1537992333.673 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:05:35.614Z,1537992335.614 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T20:05:42.478Z,1537992342.478 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:05:44.997Z,1537992344.997 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:05:48.577Z,1537992348.577 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:05:48.997Z,1537992348.997 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:05:49.262Z,1537992349.262 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T20:05:49.262Z,1537992349.262 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T20:05:49.262Z,1537992349.262 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T20:05:49.320Z,1537992349.320 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 5.463989 ppb
2018-09-26T20:05:49.723Z,1537992349.723 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T20:05:49.723Z,1537992349.723 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:05:50.087Z,1537992350.087 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T20:05:50.087Z,1537992350.087 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:05:50.087Z,1537992350.087 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T20:05:50.087Z,1537992350.087 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T20:05:54.029Z,1537992354.029 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:05:54.869Z,1537992354.869 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:05:55.018Z,1537992355.018 [Radio_Surface](INFO): Powering up
2018-09-26T20:06:00.696Z,1537992360.696 [Radio_Surface](INFO): Powering down
2018-09-26T20:06:00.965Z,1537992360.965 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:06:03.077Z,1537992363.077 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:06:03.485Z,1537992363.485 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:06:04.143Z,1537992364.143 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T20:06:04.143Z,1537992364.143 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T20:06:04.143Z,1537992364.143 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T20:06:04.255Z,1537992364.255 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 3.525403 ppb
2018-09-26T20:06:04.523Z,1537992364.523 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T20:06:04.523Z,1537992364.523 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:06:04.934Z,1537992364.934 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T20:06:04.934Z,1537992364.934 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:06:04.934Z,1537992364.934 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T20:06:04.934Z,1537992364.934 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T20:06:10.837Z,1537992370.837 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T20:06:15.469Z,1537992375.469 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:06:17.741Z,1537992377.741 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-26T20:06:17.742Z,1537992377.742 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092613120, -0.1,   0.0,1448.9,  0
2018-09-26T20:06:20.505Z,1537992380.505 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:06:20.538Z,1537992380.538 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T20:06:20.538Z,1537992380.538 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T20:06:20.538Z,1537992380.538 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T20:06:20.654Z,1537992380.654 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 3.157845 ppb
2018-09-26T20:06:20.991Z,1537992380.991 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T20:06:20.991Z,1537992380.991 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:06:21.359Z,1537992381.359 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T20:06:21.359Z,1537992381.359 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:06:21.359Z,1537992381.359 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T20:06:21.359Z,1537992381.359 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T20:06:26.598Z,1537992386.598 [Radio_Surface](INFO): Powering up
2018-09-26T20:06:26.605Z,1537992386.605 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:06:30.181Z,1537992390.181 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:06:33.467Z,1537992393.467 [Radio_Surface](INFO): Powering down
2018-09-26T20:06:37.113Z,1537992397.113 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:06:37.339Z,1537992397.339 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T20:06:37.339Z,1537992397.339 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T20:06:37.339Z,1537992397.339 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T20:06:37.391Z,1537992397.391 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 12.942261 ppb
2018-09-26T20:06:37.771Z,1537992397.771 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T20:06:37.772Z,1537992397.772 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:06:38.168Z,1537992398.168 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T20:06:38.168Z,1537992398.168 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:06:38.168Z,1537992398.168 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T20:06:38.168Z,1537992398.168 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T20:06:39.637Z,1537992399.637 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:06:40.468Z,1537992400.468 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:06:40.897Z,1537992400.897 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:06:42.128Z,1537992402.128 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-32768,V
2018-09-26T20:06:46.480Z,1537992406.480 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T20:06:50.995Z,1537992410.995 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T20:06:50.995Z,1537992410.995 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T20:06:50.995Z,1537992410.995 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T20:06:51.079Z,1537992411.079 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 6.213678 ppb
2018-09-26T20:06:51.358Z,1537992411.358 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T20:06:51.358Z,1537992411.358 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:06:51.801Z,1537992411.801 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T20:06:51.801Z,1537992411.801 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:06:51.802Z,1537992411.802 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T20:06:51.802Z,1537992411.802 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T20:06:52.123Z,1537992412.123 [RDI_Pathfinder](ERROR): Failed to parse:
:HM,G,D,0e8c,0ffe, 15.363, -0.055, 0.000
2018-09-26T20:06:53.069Z,1537992413.069 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:06:55.177Z,1537992415.177 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:07:03.780Z,1537992423.780 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T20:07:03.780Z,1537992423.780 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T20:07:03.780Z,1537992423.780 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T20:07:03.856Z,1537992423.856 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 2.247448 ppb
2018-09-26T20:07:04.195Z,1537992424.195 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T20:07:04.196Z,1537992424.196 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:07:04.576Z,1537992424.576 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T20:07:04.576Z,1537992424.576 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:07:04.576Z,1537992424.576 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T20:07:04.576Z,1537992424.576 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T20:07:15.769Z,1537992435.769 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:07:16.605Z,1537992436.605 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:07:17.748Z,1537992437.748 [RDI_Pathfinder](ERROR): Failed to parse:     +0.00,        +0.00,        +0.00,   0.00,1238.93
2018-09-26T20:07:19.329Z,1537992439.329 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:07:19.372Z,1537992439.372 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T20:07:19.372Z,1537992439.372 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T20:07:19.372Z,1537992439.372 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T20:07:19.456Z,1537992439.456 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 2.207373 ppb
2018-09-26T20:07:19.921Z,1537992439.921 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T20:07:19.921Z,1537992439.921 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:07:20.212Z,1537992440.212 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T20:07:20.212Z,1537992440.212 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:07:20.217Z,1537992440.217 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T20:07:20.217Z,1537992440.217 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T20:07:21.320Z,1537992441.320 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T20:07:21.403Z,1537992441.403 [trackPatchFDOM:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint] Stopped
2018-09-26T20:07:21.403Z,1537992441.403 [trackPatchFDOM:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-26T20:07:21.403Z,1537992441.403 [trackPatchFDOM:PatchDetectHorizontal:OutLeg:AssignPatchDetectOffInOutLeg] Running Loop=1
2018-09-26T20:07:21.847Z,1537992441.847 [trackPatchFDOM:PatchDetectHorizontal:OutLeg:AssignPatchDetectOffInOutLeg] Stopped
2018-09-26T20:07:21.847Z,1537992441.847 [trackPatchFDOM:PatchDetectHorizontal:OutLeg:AssignWpDoneInOutLeg] Running Loop=1
2018-09-26T20:07:22.152Z,1537992442.152 [trackPatchFDOM:PatchDetectHorizontal:OutLeg] Stopped
2018-09-26T20:07:22.152Z,1537992442.152 [trackPatchFDOM:PatchDetectHorizontal:OutLeg](DEBUG): Aggregate::uninitialize trackPatchFDOM:PatchDetectHorizontal:OutLeg
2018-09-26T20:07:22.152Z,1537992442.152 [trackPatchFDOM:PatchDetectHorizontal:OutLeg:AssignWpDoneInOutLeg] Stopped
2018-09-26T20:07:22.152Z,1537992442.152 [trackPatchFDOM:PatchDetectHorizontal:AssignWpBearingForCrossLeg] Running Loop=1
2018-09-26T20:07:22.570Z,1537992442.570 [trackPatchFDOM:PatchDetectHorizontal:AssignWpBearingForCrossLeg] Stopped
2018-09-26T20:07:22.571Z,1537992442.571 [trackPatchFDOM:PatchDetectHorizontal](INFO): Completed trackPatchFDOM:PatchDetectHorizontal
2018-09-26T20:07:22.571Z,1537992442.571 [trackPatchFDOM:PatchDetectHorizontal] Stopped
2018-09-26T20:07:22.571Z,1537992442.571 [trackPatchFDOM:PatchDetectHorizontal](DEBUG): Aggregate::uninitialize trackPatchFDOM:PatchDetectHorizontal
2018-09-26T20:07:22.571Z,1537992442.571 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection] Stopped
2018-09-26T20:07:22.571Z,1537992442.571 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection](DEBUG): Aggregate::uninitialize trackPatchFDOM:PatchDetectHorizontal:PatchDetection
2018-09-26T20:07:22.571Z,1537992442.571 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal] Stopped
2018-09-26T20:07:22.571Z,1537992442.571 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-26T20:07:22.572Z,1537992442.572 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](INFO): Initialize.
2018-09-26T20:07:22.573Z,1537992442.573 [trackPatchFDOM:PatchDetectHorizontal](INFO): Running loop #3
2018-09-26T20:07:22.573Z,1537992442.573 [trackPatchFDOM:PatchDetectHorizontal] Running Loop=3
2018-09-26T20:07:22.573Z,1537992442.573 [trackPatchFDOM:PatchDetectHorizontal](DEBUG): Aggregate::initialize trackPatchFDOM:PatchDetectHorizontal
2018-09-26T20:07:22.574Z,1537992442.574 [trackPatchFDOM:PatchDetectHorizontal:AssignPatchDetectOn] Running Loop=1
2018-09-26T20:07:22.991Z,1537992442.991 [trackPatchFDOM:PatchDetectHorizontal:AssignPatchDetectOn] Stopped
2018-09-26T20:07:22.991Z,1537992442.991 [trackPatchFDOM:PatchDetectHorizontal:C] Running Loop=1
2018-09-26T20:07:23.398Z,1537992443.398 [trackPatchFDOM:PatchDetectHorizontal:C](IMPORTANT): Next: bearing for CrossLeg: 342.000000 arcdeg . WpMaxDistance = 200.000000 m . Current lat, lon = 36.811730 arcdeg , -121.825707 arcdeg .
2018-09-26T20:07:23.398Z,1537992443.398 [trackPatchFDOM:PatchDetectHorizontal:C] Stopped
2018-09-26T20:07:23.398Z,1537992443.398 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg] Running Loop=1
2018-09-26T20:07:23.398Z,1537992443.398 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg](DEBUG): Aggregate::initialize trackPatchFDOM:PatchDetectHorizontal:CrossLeg
2018-09-26T20:07:23.399Z,1537992443.399 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint] Running Loop=1
2018-09-26T20:07:23.399Z,1537992443.399 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-26T20:07:23.400Z,1537992443.400 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection] Running Loop=1
2018-09-26T20:07:23.400Z,1537992443.400 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection](DEBUG): Aggregate::initialize trackPatchFDOM:PatchDetectHorizontal:PatchDetection
2018-09-26T20:07:23.400Z,1537992443.400 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal] Running Loop=1
2018-09-26T20:07:23.400Z,1537992443.400 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](INFO): Initialize.
2018-09-26T20:07:25.210Z,1537992445.210 [Radio_Surface](INFO): Powering up
2018-09-26T20:07:26.273Z,1537992446.273 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:07:27.745Z,1537992447.745 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:07:31.953Z,1537992451.953 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:07:33.364Z,1537992453.364 [BPC1](FAULT): Battery stick #19 (s/n: 0136) reported OVER_TEMP_ALARM. Status code: 0x1717.
2018-09-26T20:07:33.370Z,1537992453.370 [BPC1](FAULT): Battery stick #40 (s/n: 012D) reported OVER_TEMP_ALARM. Status code: 0x1717.
2018-09-26T20:07:33.370Z,1537992453.370 [BPC1](INFO): Calculating totals. Valid battery stick count: 54. Valid reserve battery stick count: 6.
2018-09-26T20:07:34.114Z,1537992454.114 [Radio_Surface](INFO): Powering down
2018-09-26T20:07:39.309Z,1537992459.309 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:07:39.729Z,1537992459.729 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:07:39.828Z,1537992459.828 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T20:07:39.833Z,1537992459.833 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T20:07:39.833Z,1537992459.833 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T20:07:39.958Z,1537992459.958 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 2.197658 ppb
2018-09-26T20:07:40.153Z,1537992460.153 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:07:40.184Z,1537992460.184 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T20:07:40.184Z,1537992460.184 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:07:40.591Z,1537992460.591 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T20:07:40.591Z,1537992460.591 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:07:40.592Z,1537992460.592 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T20:07:40.592Z,1537992460.592 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T20:07:50.861Z,1537992470.861 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:07:52.337Z,1537992472.337 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:07:52.701Z,1537992472.701 [CTD_NeilBrown](ERROR): Bad response:   0.98
2018-09-26T20:07:56.214Z,1537992476.214 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T20:07:56.215Z,1537992476.215 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T20:07:56.215Z,1537992476.215 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T20:07:56.346Z,1537992476.346 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 2.176608 ppb
2018-09-26T20:07:56.572Z,1537992476.572 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T20:07:56.572Z,1537992476.572 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:07:56.915Z,1537992476.915 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T20:07:57.017Z,1537992477.017 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T20:07:57.017Z,1537992477.017 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:07:57.018Z,1537992477.018 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T20:07:57.018Z,1537992477.018 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T20:07:59.061Z,1537992479.061 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:08:02.814Z,1537992482.814 [Radio_Surface](INFO): Powering up
2018-09-26T20:08:08.474Z,1537992488.474 [Radio_Surface](INFO): Powering down
2018-09-26T20:08:12.985Z,1537992492.985 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T20:08:12.985Z,1537992492.985 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T20:08:12.986Z,1537992492.986 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T20:08:13.072Z,1537992493.072 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 2.182680 ppb
2018-09-26T20:08:13.383Z,1537992493.383 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T20:08:13.383Z,1537992493.383 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:08:13.790Z,1537992493.790 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T20:08:13.791Z,1537992493.791 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:08:13.791Z,1537992493.791 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T20:08:13.791Z,1537992493.791 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T20:08:23.217Z,1537992503.217 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:08:23.637Z,1537992503.637 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:08:28.046Z,1537992508.046 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:08:30.160Z,1537992510.160 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T20:08:30.160Z,1537992510.160 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T20:08:30.160Z,1537992510.160 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T20:08:30.222Z,1537992510.222 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 2.190777 ppb
2018-09-26T20:08:30.596Z,1537992510.596 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T20:08:30.605Z,1537992510.605 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:08:31.010Z,1537992511.010 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T20:08:31.011Z,1537992511.011 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:08:31.011Z,1537992511.011 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T20:08:31.011Z,1537992511.011 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T20:08:32.114Z,1537992512.114 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T20:08:33.097Z,1537992513.097 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:08:35.597Z,1537992515.597 [Radio_Surface](INFO): Powering up
2018-09-26T20:08:36.673Z,1537992516.673 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:08:37.305Z,1537992517.305 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:08:41.301Z,1537992521.301 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:08:43.686Z,1537992523.686 [Radio_Surface](INFO): Powering down
2018-09-26T20:08:45.717Z,1537992525.717 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:08:48.195Z,1537992528.195 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T20:08:48.195Z,1537992528.195 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T20:08:48.196Z,1537992528.196 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T20:08:48.402Z,1537992528.402 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 2.189159 ppb
2018-09-26T20:08:48.592Z,1537992528.592 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T20:08:48.592Z,1537992528.592 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:08:48.986Z,1537992528.986 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T20:08:48.987Z,1537992528.987 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:08:48.987Z,1537992528.987 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T20:08:48.987Z,1537992528.987 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T20:08:49.809Z,1537992529.809 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint] Stopped
2018-09-26T20:08:49.809Z,1537992529.809 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-26T20:08:49.809Z,1537992529.809 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:B] Running Loop=1
2018-09-26T20:08:49.810Z,1537992529.810 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:B](DEBUG): Aggregate::initialize trackPatchFDOM:PatchDetectHorizontal:CrossLeg:B
2018-09-26T20:08:50.194Z,1537992530.194 [trackPatchFDOM:SurfaceComms] Running Loop=1
2018-09-26T20:08:50.194Z,1537992530.194 [trackPatchFDOM:SurfaceComms](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceComms
2018-09-26T20:08:50.194Z,1537992530.194 [trackPatchFDOM:SurfaceComms:SurfaceComms] Running Loop=1
2018-09-26T20:08:50.194Z,1537992530.194 [trackPatchFDOM:SurfaceComms:SurfaceComms](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceComms:SurfaceComms
2018-09-26T20:08:50.195Z,1537992530.195 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface] Running Loop=1
2018-09-26T20:08:50.195Z,1537992530.195 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-26T20:08:50.195Z,1537992530.195 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-26T20:08:50.195Z,1537992530.195 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-26T20:08:50.196Z,1537992530.196 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-26T20:08:50.196Z,1537992530.196 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-26T20:08:50.201Z,1537992530.201 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-26T20:08:51.393Z,1537992531.393 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:08:52.225Z,1537992532.225 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:08:53.905Z,1537992533.905 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:09:01.673Z,1537992541.673 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:09:01.979Z,1537992541.979 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T20:09:01.979Z,1537992541.979 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T20:09:01.979Z,1537992541.979 [trackPatchFDOM:Science:PeakDetectFDOM:B] Running Loop=1
2018-09-26T20:09:02.115Z,1537992542.115 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 3.593005 ppb
2018-09-26T20:09:02.364Z,1537992542.364 [trackPatchFDOM:Science:PeakDetectFDOM:B] Stopped
2018-09-26T20:09:02.364Z,1537992542.364 [trackPatchFDOM:Science:PeakDetectFDOM](INFO): Completed trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:09:02.521Z,1537992542.521 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:09:02.752Z,1537992542.752 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T20:09:02.752Z,1537992542.752 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:09:02.752Z,1537992542.752 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T20:09:02.752Z,1537992542.752 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T20:09:03.361Z,1537992543.361 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:09:04.015Z,1537992544.015 [trackPatchFDOM:SurfaceComms:SurfaceComms:B] Running Loop=1
2018-09-26T20:09:04.015Z,1537992544.015 [trackPatchFDOM:SurfaceComms:SurfaceComms:B](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceComms:SurfaceComms:B
2018-09-26T20:09:04.015Z,1537992544.015 [trackPatchFDOM:SurfaceComms:SurfaceComms:B:A] Running Loop=1
2018-09-26T20:09:04.302Z,1537992544.302 [Radio_Surface](INFO): Powering up
2018-09-26T20:09:04.392Z,1537992544.392 [trackPatchFDOM:SurfaceComms:SurfaceComms:B] Stopped
2018-09-26T20:09:04.392Z,1537992544.392 [trackPatchFDOM:SurfaceComms:SurfaceComms:B](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceComms:SurfaceComms:B
2018-09-26T20:09:04.392Z,1537992544.392 [trackPatchFDOM:SurfaceComms:SurfaceComms:B:A] Stopped
2018-09-26T20:09:04.392Z,1537992544.392 [trackPatchFDOM:SurfaceComms:SurfaceComms:C] Running Loop=1
2018-09-26T20:09:04.392Z,1537992544.392 [trackPatchFDOM:SurfaceComms:SurfaceComms:C](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceComms:SurfaceComms:C
2018-09-26T20:09:04.392Z,1537992544.392 [trackPatchFDOM:SurfaceComms:SurfaceComms:C:A] Running Loop=1
2018-09-26T20:09:04.768Z,1537992544.768 [trackPatchFDOM:M.YoYo] Preempted
2018-09-26T20:09:04.768Z,1537992544.768 [trackPatchFDOM:L.DepthEnvelope] Preempted
2018-09-26T20:09:04.768Z,1537992544.768 [trackPatchFDOM:K.SetSpeed] Preempted
2018-09-26T20:09:04.768Z,1537992544.768 [trackPatchFDOM:Science] Preempted
2018-09-26T20:09:04.768Z,1537992544.768 [trackPatchFDOM:Science:A] Preempted
2018-09-26T20:09:04.768Z,1537992544.768 [trackPatchFDOM:Science:C] Preempted
2018-09-26T20:09:04.768Z,1537992544.768 [trackPatchFDOM:Science:Read_Oil] Preempted
2018-09-26T20:09:04.768Z,1537992544.768 [trackPatchFDOM:Science:PeakDetectFDOM] Preempted
2018-09-26T20:09:04.768Z,1537992544.768 [trackPatchFDOM:I.Buoyancy] Preempted
2018-09-26T20:09:04.768Z,1537992544.768 [trackPatchFDOM:H.Pitch] Preempted
2018-09-26T20:09:04.768Z,1537992544.768 [trackPatchFDOM:G.WaterDepthEnvelope] Preempted
2018-09-26T20:09:04.768Z,1537992544.768 [trackPatchFDOM:F.OffshoreEnvelope] Preempted
2018-09-26T20:09:04.833Z,1537992544.833 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:09:05.103Z,1537992545.103 [NAL9602](INFO): Powering up
2018-09-26T20:09:05.197Z,1537992545.197 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-26T20:09:05.597Z,1537992545.597 [Aanderaa_O2](INFO): Powering down
2018-09-26T20:09:06.932Z,1537992546.932 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T20:09:10.133Z,1537992550.133 [BuoyancyServo](ERROR): getPosition uart error serial timeout
2018-09-26T20:09:10.133Z,1537992550.133 [BuoyancyServo](FAULT): Buoyancy getPosition uart error.serial timeout
2018-09-26T20:09:10.133Z,1537992550.133 [BuoyancyServo] Communications Fault, FailCount= 1
2018-09-26T20:09:10.133Z,1537992550.133 [BuoyancyServo](ERROR): Communications Fault
2018-09-26T20:09:10.178Z,1537992550.178 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-09-26T20:09:10.308Z,1537992550.308 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-26T20:09:10.314Z,1537992550.314 [BuoyancyServo](INFO): Powering down
2018-09-26T20:09:11.868Z,1537992551.868 [BuoyancyServo](FAULT): LCB fault:  Current Limiter Activated.
2018-09-26T20:09:11.868Z,1537992551.868 [BuoyancyServo] Hardware Fault, FailCount= 1
2018-09-26T20:09:11.868Z,1537992551.868 [BuoyancyServo](ERROR): Hardware Fault
2018-09-26T20:09:12.298Z,1537992552.298 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-26T20:09:12.298Z,1537992552.298 [BuoyancyServo] No Fault, FailCount= 1
2018-09-26T20:09:12.660Z,1537992552.660 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-26T20:09:12.784Z,1537992552.784 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-26T20:09:16.200Z,1537992556.200 [NAL9602](INFO): NAL9602 initialized
2018-09-26T20:09:17.401Z,1537992557.401 [BuoyancyServo](ERROR): getPosition uart error serial timeout
2018-09-26T20:09:17.401Z,1537992557.401 [BuoyancyServo](FAULT): Buoyancy getPosition uart error.serial timeout
2018-09-26T20:09:17.401Z,1537992557.401 [BuoyancyServo] Communications Fault, FailCount= 2
2018-09-26T20:09:17.401Z,1537992557.401 [BuoyancyServo](ERROR): Communications Fault
2018-09-26T20:09:17.407Z,1537992557.407 [CBIT](ERROR): Communications Fault in component: BuoyancyServo
2018-09-26T20:09:17.534Z,1537992557.534 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-26T20:09:17.534Z,1537992557.534 [BuoyancyServo](INFO): Powering down
2018-09-26T20:09:19.103Z,1537992559.103 [BuoyancyServo](FAULT): LCB fault:  Current Limiter Activated.
2018-09-26T20:09:19.103Z,1537992559.103 [BuoyancyServo] Hardware Fault, FailCount= 2
2018-09-26T20:09:19.104Z,1537992559.104 [BuoyancyServo](ERROR): Hardware Fault
2018-09-26T20:09:19.505Z,1537992559.505 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-26T20:09:19.505Z,1537992559.505 [BuoyancyServo] No Fault, FailCount= 2
2018-09-26T20:09:19.922Z,1537992559.922 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-26T20:09:20.042Z,1537992560.042 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-26T20:09:35.836Z,1537992575.836 [NAL9602](INFO): SBD MO Status=0, MOMSN=1734, MT Status=0, MTMSN=0
2018-09-26T20:09:35.836Z,1537992575.836 [NAL9602](INFO): No messages in MT queue
2018-09-26T20:09:42.228Z,1537992582.228 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T20:10:17.432Z,1537992617.432 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T20:10:53.028Z,1537992653.028 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T20:11:28.237Z,1537992688.237 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T20:12:03.432Z,1537992723.432 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T20:12:34.059Z,1537992754.059 [DataOverHttps](IMPORTANT): SBD MTMSN=20180926T201234
2018-09-26T20:12:34.062Z,1537992754.062 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.003367
2018-09-26T20:12:34.126Z,1537992754.126 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-32768,V
2018-09-26T20:12:38.212Z,1537992758.212 [DataOverHttps](INFO): Received command:stop
2018-09-26T20:12:38.302Z,1537992758.302 [CommandLine](IMPORTANT): got command stop
2018-09-26T20:12:38.302Z,1537992758.302 [Supervisor](INFO): Stop Mission called by CommandLine::commandStop
2018-09-26T20:12:38.669Z,1537992758.669 [MissionManager](INFO): MissionManager is completed.
2018-09-26T20:12:38.669Z,1537992758.669 [MissionManager](INFO): Uninitializing Mission trackPatchFDOM
2018-09-26T20:12:38.669Z,1537992758.669 [trackPatchFDOM] Stopped
2018-09-26T20:12:38.670Z,1537992758.670 [trackPatchFDOM](DEBUG): Aggregate::uninitialize trackPatchFDOM
2018-09-26T20:12:38.670Z,1537992758.670 [trackPatchFDOM:A.AltitudeEnvelope] Stopped
2018-09-26T20:12:38.670Z,1537992758.670 [trackPatchFDOM:A.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-26T20:12:38.670Z,1537992758.670 [trackPatchFDOM:B.DepthEnvelope] Stopped
2018-09-26T20:12:38.670Z,1537992758.670 [trackPatchFDOM:B.DepthEnvelope](DEBUG): Uninitialize.
2018-09-26T20:12:38.670Z,1537992758.670 [trackPatchFDOM:SurfaceComms] Stopped
2018-09-26T20:12:38.670Z,1537992758.670 [trackPatchFDOM:SurfaceComms](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceComms
2018-09-26T20:12:38.670Z,1537992758.670 [trackPatchFDOM:SurfaceComms:SurfaceComms] Stopped
2018-09-26T20:12:38.670Z,1537992758.670 [trackPatchFDOM:SurfaceComms:SurfaceComms](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceComms:SurfaceComms
2018-09-26T20:12:38.670Z,1537992758.670 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface] Stopped
2018-09-26T20:12:38.671Z,1537992758.671 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-26T20:12:38.671Z,1537992758.671 [trackPatchFDOM:SurfaceComms:SurfaceComms:C] Stopped
2018-09-26T20:12:38.671Z,1537992758.671 [trackPatchFDOM:SurfaceComms:SurfaceComms:C](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceComms:SurfaceComms:C
2018-09-26T20:12:38.671Z,1537992758.671 [trackPatchFDOM:SurfaceComms:SurfaceComms:C:A] Stopped
2018-09-26T20:12:38.671Z,1537992758.671 [trackPatchFDOM:F.OffshoreEnvelope] Stopped
2018-09-26T20:12:38.671Z,1537992758.671 [trackPatchFDOM:F.OffshoreEnvelope](DEBUG): Uninitialize OffshoreEnvelopeComponent.
2018-09-26T20:12:38.671Z,1537992758.671 [trackPatchFDOM:G.WaterDepthEnvelope] Stopped
2018-09-26T20:12:38.671Z,1537992758.671 [trackPatchFDOM:G.WaterDepthEnvelope](DEBUG): Uninitialize WaterDepthEnvelopeComponent.
2018-09-26T20:12:38.671Z,1537992758.671 [trackPatchFDOM:H.Pitch] Stopped
2018-09-26T20:12:38.671Z,1537992758.671 [trackPatchFDOM:I.Buoyancy] Stopped
2018-09-26T20:12:38.671Z,1537992758.671 [trackPatchFDOM:I.Buoyancy](DEBUG): Uninitialize Buoyancy Component.
2018-09-26T20:12:38.672Z,1537992758.672 [trackPatchFDOM:Science] Stopped
2018-09-26T20:12:38.672Z,1537992758.672 [trackPatchFDOM:Science](DEBUG): Aggregate::uninitialize trackPatchFDOM:Science
2018-09-26T20:12:38.672Z,1537992758.672 [trackPatchFDOM:Science:A] Stopped
2018-09-26T20:12:38.672Z,1537992758.672 [trackPatchFDOM:Science:C] Stopped
2018-09-26T20:12:38.672Z,1537992758.672 [trackPatchFDOM:Science:Read_Oil] Stopped
2018-09-26T20:12:38.672Z,1537992758.672 [trackPatchFDOM:Science:PeakDetectFDOM] Stopped
2018-09-26T20:12:38.672Z,1537992758.672 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::uninitialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:12:38.672Z,1537992758.672 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T20:12:38.672Z,1537992758.672 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T20:12:38.672Z,1537992758.672 [trackPatchFDOM:K.SetSpeed] Stopped
2018-09-26T20:12:38.672Z,1537992758.672 [trackPatchFDOM:K.SetSpeed](DEBUG): Uninitialize.
2018-09-26T20:12:38.677Z,1537992758.677 [trackPatchFDOM:L.DepthEnvelope] Stopped
2018-09-26T20:12:38.677Z,1537992758.677 [trackPatchFDOM:L.DepthEnvelope](DEBUG): Uninitialize.
2018-09-26T20:12:38.677Z,1537992758.677 [trackPatchFDOM:M.YoYo] Stopped
2018-09-26T20:12:38.677Z,1537992758.677 [trackPatchFDOM:M.YoYo](DEBUG): Uninitialize YoYoComponent.
2018-09-26T20:12:38.677Z,1537992758.677 [trackPatchFDOM:PatchDetectHorizontal] Stopped
2018-09-26T20:12:38.677Z,1537992758.677 [trackPatchFDOM:PatchDetectHorizontal](DEBUG): Aggregate::uninitialize trackPatchFDOM:PatchDetectHorizontal
2018-09-26T20:12:38.677Z,1537992758.677 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection] Stopped
2018-09-26T20:12:38.678Z,1537992758.678 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection](DEBUG): Aggregate::uninitialize trackPatchFDOM:PatchDetectHorizontal:PatchDetection
2018-09-26T20:12:38.678Z,1537992758.678 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal] Stopped
2018-09-26T20:12:38.678Z,1537992758.678 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-26T20:12:38.678Z,1537992758.678 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](INFO): Initialize.
2018-09-26T20:12:38.678Z,1537992758.678 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg] Stopped
2018-09-26T20:12:38.678Z,1537992758.678 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg](DEBUG): Aggregate::uninitialize trackPatchFDOM:PatchDetectHorizontal:CrossLeg
2018-09-26T20:12:38.679Z,1537992758.679 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:B] Stopped
2018-09-26T20:12:38.679Z,1537992758.679 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:B](DEBUG): Aggregate::uninitialize trackPatchFDOM:PatchDetectHorizontal:CrossLeg:B
2018-09-26T20:12:39.072Z,1537992759.072 [MissionManager](IMPORTANT): Started mission Default
2018-09-26T20:12:39.072Z,1537992759.072 [Default] Running Loop=1
2018-09-26T20:12:39.072Z,1537992759.072 [Default](DEBUG): Aggregate::initialize Default
2018-09-26T20:12:39.072Z,1537992759.072 [Default:B.GoToSurface] Running Loop=1
2018-09-26T20:12:39.072Z,1537992759.072 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-26T20:12:39.077Z,1537992759.077 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-26T20:12:39.077Z,1537992759.077 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-26T20:12:39.077Z,1537992759.077 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-26T20:12:39.078Z,1537992759.078 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-26T20:12:39.078Z,1537992759.078 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-26T20:12:39.079Z,1537992759.079 [Default:A.Wait] Running Loop=1
2018-09-26T20:12:39.079Z,1537992759.079 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-26T20:12:52.233Z,1537992772.233 [Default:A.Wait](INFO): Done Waiting.
2018-09-26T20:12:52.233Z,1537992772.233 [Default:A.Wait] Stopped
2018-09-26T20:12:52.233Z,1537992772.233 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-26T20:12:52.626Z,1537992772.626 [Default:CheckIn] Running Loop=1
2018-09-26T20:12:52.626Z,1537992772.626 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-26T20:12:52.626Z,1537992772.626 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-26T20:15:00.350Z,1537992900.350 [DataOverHttps](IMPORTANT): SBD MTMSN=20180926T201500
2018-09-26T20:15:04.494Z,1537992904.494 [DataOverHttps](INFO): Received command:sched asap "load Science/trackPatchFDOM.xml;set trackPatchFDOM.MaxDepth 15 meter;set trackPatchFDOM.MinOffshore 1000 meter;set trackPatchFDOM.NeedCommsTime 30 minute;set trackPatchFDOM.MissionTimeout 3 hour" 1k8t 1 3
2018-09-26T20:15:04.574Z,1537992904.574 [CommandLine](IMPORTANT): got command schedule asap "load Science/trackPatchFDOM.xml;set trackPatchFDOM.MaxDepth 15 meter;set trackPatchFDOM.MinOffshore 1000 meter;set trackPatchFDOM.NeedCommsTime 30 minute;set trackPatchFDOM.MissionTimeout 3 hour" 1k8t 1 3.000000
2018-09-26T20:15:04.574Z,1537992904.574 [CommandLine](IMPORTANT): Scheduling command #1 of 3 with id=1k8t
2018-09-26T20:15:04.575Z,1537992904.575 [CommandLine](IMPORTANT): Scheduled #8 (#1 of 3 with id='1k8t'): "load Science/trackPatchFDOM.xml;set trackPatchFDOM.MaxDepth 15 meter;set trackPatchFDOM.MinOffshore 1000 meter;set trackPatchFDOM.NeedCommsTime 30 minute;set trackPatchFDOM.MissionTimeout 3 hour" ASAP
2018-09-26T20:15:05.258Z,1537992905.258 [DataOverHttps](IMPORTANT): SBD MTMSN=20180926T201505
2018-09-26T20:15:09.585Z,1537992909.585 [DataOverHttps](INFO): Received command:sched asap "set trackPatchFDOM.YoYoMinDepth .5 meter;set trackPatchFDOM.YoYoMaxDepth 4 meter;set trackPatchFDOM.WpMaxDistance 800 meter;set trackPatchFDOM.WpTimeout 30 minute;set trackPatchFDOM.LowPassWindowLen 7 count" 1k8t 2 3
2018-09-26T20:15:09.691Z,1537992909.691 [CommandLine](IMPORTANT): got command schedule asap "set trackPatchFDOM.YoYoMinDepth .5 meter;set trackPatchFDOM.YoYoMaxDepth 4 meter;set trackPatchFDOM.WpMaxDistance 800 meter;set trackPatchFDOM.WpTimeout 30 minute;set trackPatchFDOM.LowPassWindowLen 7 count" 1k8t 2 3.000000
2018-09-26T20:15:09.692Z,1537992909.692 [CommandLine](IMPORTANT): Scheduling command #2 of 3 with id=1k8t
2018-09-26T20:15:09.694Z,1537992909.694 [CommandLine](IMPORTANT): Scheduled #9 (#2 of 3 with id='1k8t'): "set trackPatchFDOM.YoYoMinDepth .5 meter;set trackPatchFDOM.YoYoMaxDepth 4 meter;set trackPatchFDOM.WpMaxDistance 800 meter;set trackPatchFDOM.WpTimeout 30 minute;set trackPatchFDOM.LowPassWindowLen 7 count" ASAP
2018-09-26T20:15:10.351Z,1537992910.351 [DataOverHttps](IMPORTANT): SBD MTMSN=20180926T201510
2018-09-26T20:15:14.626Z,1537992914.626 [DataOverHttps](INFO): Received command:sched asap "set trackPatchFDOM.PeakShallowBnd .5 meter;set trackPatchFDOM.PeakDeepBnd 3.7 meter;set trackPatchFDOM.FilterWidth 2 count;run " 1k8t 3 3
2018-09-26T20:15:14.694Z,1537992914.694 [CommandLine](IMPORTANT): got command schedule asap "set trackPatchFDOM.PeakShallowBnd .5 meter;set trackPatchFDOM.PeakDeepBnd 3.7 meter;set trackPatchFDOM.FilterWidth 2 count;run " 1k8t 3 3.000000
2018-09-26T20:15:14.694Z,1537992914.694 [CommandLine](IMPORTANT): Scheduling command #3 of 3 with id=1k8t
2018-09-26T20:15:14.695Z,1537992914.695 [CommandLine](IMPORTANT): Scheduled #10 (#3 of 3 with id='1k8t'): "set trackPatchFDOM.PeakShallowBnd .5 meter;set trackPatchFDOM.PeakDeepBnd 3.7 meter;set trackPatchFDOM.FilterWidth 2 count;run " ASAP
2018-09-26T20:15:14.736Z,1537992914.736 [CommandLine](IMPORTANT): got command load ./Missions/Science/trackPatchFDOM.xml
2018-09-26T20:15:14.749Z,1537992914.749 [MissionManager](INFO): Loading Mission: ./Missions/Science/trackPatchFDOM.xml
2018-09-26T20:15:15.211Z,1537992915.211 [MissionManager](INFO): DefineArg trackPatchFDOM.MinAltitude = 5.000000 m
2018-09-26T20:15:15.214Z,1537992915.214 [MissionManager](INFO): DefineArg trackPatchFDOM.MaxDepth = 65.000000 m
2018-09-26T20:15:15.216Z,1537992915.216 [MissionManager](INFO): DefineArg trackPatchFDOM.MinWaterDepth = 10.000000 m
2018-09-26T20:15:15.218Z,1537992915.218 [MissionManager](INFO): DefineArg trackPatchFDOM.MinOffshore = 2000.000000 m
2018-09-26T20:15:15.220Z,1537992915.220 [MissionManager](INFO): DefineArg trackPatchFDOM.NeedCommsTime = 180.000000 min
2018-09-26T20:15:15.223Z,1537992915.223 [MissionManager](INFO): DefineArg trackPatchFDOM.MissionTimeout = 56.000000 h
2018-09-26T20:15:15.226Z,1537992915.226 [MissionManager](INFO): DefineArg trackPatchFDOM.MassDefault = 0.200000 cm
2018-09-26T20:15:15.228Z,1537992915.228 [MissionManager](INFO): DefineArg trackPatchFDOM.BuoyancyNeutral = 274.999999 cc
2018-09-26T20:15:15.275Z,1537992915.275 [MissionManager](INFO): DefineArg trackPatchFDOM.YoYoMinDepth = 5.000000 m
2018-09-26T20:15:15.277Z,1537992915.277 [MissionManager](INFO): DefineArg trackPatchFDOM.YoYoMaxDepth = 25.000000 m
2018-09-26T20:15:15.279Z,1537992915.279 [MissionManager](INFO): DefineArg trackPatchFDOM.YoYoUpPitch = 20.000000 arcdeg
2018-09-26T20:15:15.281Z,1537992915.281 [MissionManager](INFO): DefineArg trackPatchFDOM.YoYoDownPitch = -20.000000 arcdeg
2018-09-26T20:15:15.284Z,1537992915.284 [MissionManager](INFO): DefineArg trackPatchFDOM.Speed = 1.000000 m/s
2018-09-26T20:15:15.302Z,1537992915.302 [MissionManager](INFO): DefineArg trackPatchFDOM.WpMaxDistance = 1000.000000 m
2018-09-26T20:15:15.305Z,1537992915.305 [MissionManager](INFO): DefineArg trackPatchFDOM.WpTimeout = 8000.000000 s
2018-09-26T20:15:15.307Z,1537992915.307 [MissionManager](INFO): DefineArg trackPatchFDOM.WaterFrame = 1 bool
2018-09-26T20:15:15.309Z,1537992915.309 [MissionManager](INFO): DefineArg trackPatchFDOM.Repeat = 20.000000 count
2018-09-26T20:15:15.311Z,1537992915.311 [MissionManager](INFO): DefineArg trackPatchFDOM.Turn = 144.000000 arcdeg
2018-09-26T20:15:15.342Z,1537992915.342 [MissionManager](INFO): DefineArg trackPatchFDOM.Reverse = 180.000000 arcdeg
2018-09-26T20:15:15.344Z,1537992915.344 [MissionManager](INFO): DefineArg trackPatchFDOM.TwoPi = 360.000000 arcdeg
2018-09-26T20:15:15.347Z,1537992915.347 [MissionManager](INFO): DefineArg trackPatchFDOM.TimeWindowPeakRpt = nan min
2018-09-26T20:15:15.349Z,1537992915.349 [MissionManager](INFO): DefineArg trackPatchFDOM.LowPassWindowLen = 20.000000 count
2018-09-26T20:15:15.351Z,1537992915.351 [MissionManager](INFO): DefineArg trackPatchFDOM.PeakShallowBnd = 2.000000 m
2018-09-26T20:15:15.391Z,1537992915.391 [MissionManager](INFO): DefineArg trackPatchFDOM.PeakDeepBnd = 4.000000 m
2018-09-26T20:15:15.393Z,1537992915.393 [MissionManager](INFO): DefineArg trackPatchFDOM.FilterWidth = 4.000000 count
2018-09-26T20:15:15.395Z,1537992915.395 [MissionManager](INFO): DefineArg trackPatchFDOM.BeginThreshold = nan ug/l
2018-09-26T20:15:15.418Z,1537992915.418 [MissionManager](INFO): DefineArg trackPatchFDOM.OffPeakFraction = 80.000000 %
2018-09-26T20:15:15.420Z,1537992915.420 [MissionManager](INFO): DefineArg trackPatchFDOM.PatchMode = 0 bool
2018-09-26T20:15:15.450Z,1537992915.450 [MissionManager](INFO): DefineArg trackPatchFDOM.PatchTrackingHorizontal = 1 bool
2018-09-26T20:15:15.461Z,1537992915.461 [MissionManager](INFO): DefineArg trackPatchFDOM.WpBearing = -90.000000 arcdeg
2018-09-26T20:15:15.463Z,1537992915.463 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchDetectOn = 0 bool
2018-09-26T20:15:15.466Z,1537992915.466 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-26T20:15:15.466Z,1537992915.466 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-3278,V
2018-09-26T20:15:15.475Z,1537992915.475 [MissionManager](INFO): DefineOutput trackPatchFDOM.WpDone = 0 bool
2018-09-26T20:15:15.486Z,1537992915.486 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchFDOM = nan ug/l
2018-09-26T20:15:15.501Z,1537992915.501 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchFDOMDepth = nan m
2018-09-26T20:15:15.504Z,1537992915.504 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchFDOMLatitude = nan arcdeg
2018-09-26T20:15:15.510Z,1537992915.510 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchFDOMLongitude = nan arcdeg
2018-09-26T20:15:15.525Z,1537992915.525 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchFDOMDistance = 0.000000 m
2018-09-26T20:15:15.526Z,1537992915.526 [trackPatchFDOM:A.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-26T20:15:15.566Z,1537992915.566 [trackPatchFDOM:B.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-26T20:15:15.587Z,1537992915.587 [MissionManager](INFO): Inserting Stack: Missions/Insert/Surface.xml
2018-09-26T20:15:15.639Z,1537992915.639 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceCommsSplit.SurfaceDepthRate = nan m/s
2018-09-26T20:15:15.670Z,1537992915.670 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceCommsSplit.SurfacePitch = 20.000000 arcdeg
2018-09-26T20:15:15.673Z,1537992915.673 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceCommsSplit.SurfaceSpeed = 1.000000 m/s
2018-09-26T20:15:15.675Z,1537992915.675 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceCommsSplit.IridiumTimeout = 30.000000 min
2018-09-26T20:15:15.677Z,1537992915.677 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceCommsSplit.UnpackSplitAtSurface = 0 bool
2018-09-26T20:15:15.678Z,1537992915.678 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-26T20:15:15.702Z,1537992915.702 [MissionManager](INFO): RedefineArg trackPatchFDOM:SurfaceCommsSplit.SurfacePitch = value:20.000000 arcdeg
2018-09-26T20:15:15.704Z,1537992915.704 [MissionManager](INFO): RedefineArg trackPatchFDOM:SurfaceCommsSplit.SurfaceSpeed = value:1.000000 m/s
2018-09-26T20:15:15.731Z,1537992915.731 [MissionManager](INFO): RedefineArg trackPatchFDOM:SurfaceCommsSplit.UnpackSplitAtSurface = value:1 bool
2018-09-26T20:15:15.733Z,1537992915.733 [MissionManager](INFO): Inserting Stack: Missions/Insert/Surface.xml
2018-09-26T20:15:15.840Z,1537992915.840 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.SurfaceDepthRate = nan m/s
2018-09-26T20:15:15.866Z,1537992915.866 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.SurfacePitch = 20.000000 arcdeg
2018-09-26T20:15:15.885Z,1537992915.885 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.SurfaceSpeed = 1.000000 m/s
2018-09-26T20:15:15.887Z,1537992915.887 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.IridiumTimeout = 30.000000 min
2018-09-26T20:15:15.902Z,1537992915.902 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.UnpackSplitAtSurface = 0 bool
2018-09-26T20:15:15.902Z,1537992915.902 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-26T20:15:15.938Z,1537992915.938 [MissionManager](INFO): RedefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.SurfacePitch = value:20.000000 arcdeg
2018-09-26T20:15:15.940Z,1537992915.940 [MissionManager](INFO): RedefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.SurfaceSpeed = value:1.000000 m/s
2018-09-26T20:15:15.958Z,1537992915.958 [trackPatchFDOM:F.OffshoreEnvelope](DEBUG): Construct OffshoreEnvelope.
2018-09-26T20:15:15.963Z,1537992915.963 [trackPatchFDOM:G.WaterDepthEnvelope](DEBUG): Construct WaterDepthEnvelope.
2018-09-26T20:15:15.967Z,1537992915.967 [trackPatchFDOM:H.Pitch](DEBUG): Construct.
2018-09-26T20:15:15.971Z,1537992915.971 [trackPatchFDOM:I.Buoyancy](DEBUG): Construct Buoyancy.
2018-09-26T20:15:16.007Z,1537992916.007 [MissionManager](INFO): Inserting Stack: Missions/Insert/Science.xml
2018-09-26T20:15:16.538Z,1537992916.538 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.SampleISUS = 0 bool
2018-09-26T20:15:16.540Z,1537992916.540 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.SampleISUSmaxPitch = 60.000000 arcdeg
2018-09-26T20:15:16.562Z,1537992916.562 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.SampleISUSminPitch = -60.000000 arcdeg
2018-09-26T20:15:16.564Z,1537992916.564 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakDetectChlActive = 0 bool
2018-09-26T20:15:16.567Z,1537992916.567 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.TimeWindowPeakReport = nan min
2018-09-26T20:15:16.569Z,1537992916.569 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.HighestChlPeakReportActive = 0 bool
2018-09-26T20:15:16.571Z,1537992916.571 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PatchTracking = 0 bool
2018-09-26T20:15:16.641Z,1537992916.641 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.FilterWidthHorizontal = 3.000000 count
2018-09-26T20:15:16.653Z,1537992916.653 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.NumProfilesSlidingwindow = 100.000000 count
2018-09-26T20:15:16.656Z,1537992916.656 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.OffPeakFractionHorizontal = 80.000000 %
2018-09-26T20:15:16.662Z,1537992916.662 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakDetectNO3Active = 0 bool
2018-09-26T20:15:16.664Z,1537992916.664 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakDetectOilActive = 0 bool
2018-09-26T20:15:16.680Z,1537992916.680 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakDetectFDOMActive = 0 bool
2018-09-26T20:15:16.686Z,1537992916.686 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.UpwardDerivativeOfTemperatureActive = 0 bool
2018-09-26T20:15:16.693Z,1537992916.693 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledAanderaaO2 = 1.000000 bool
2018-09-26T20:15:16.702Z,1537992916.702 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledNeilBrown = 1.000000 bool
2018-09-26T20:15:16.708Z,1537992916.708 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledSeabird = 0.000000 bool
2018-09-26T20:15:16.725Z,1537992916.725 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledTurbulence_NPS = 0.000000 bool
2018-09-26T20:15:16.730Z,1537992916.730 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledWetLabsBB2FL = 0.000000 bool
2018-09-26T20:15:16.742Z,1537992916.742 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledWetLabsSeaOWL_UV_A = 1.000000 bool
2018-09-26T20:15:16.749Z,1537992916.749 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledISUS = 0.000000 bool
2018-09-26T20:15:16.755Z,1537992916.755 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.LowPassWindowLength = 20.000000 count
2018-09-26T20:15:16.757Z,1537992916.757 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakChlShallowBound = nan m
2018-09-26T20:15:16.759Z,1537992916.759 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakChlDeepBound = nan m
2018-09-26T20:15:16.762Z,1537992916.762 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakShallowBound = nan m
2018-09-26T20:15:16.764Z,1537992916.764 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakDeepBound = nan m
2018-09-26T20:15:16.774Z,1537992916.774 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakChl = 0.000000 ug/l
2018-09-26T20:15:16.781Z,1537992916.781 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakChlDepth = 0.000000 m
2018-09-26T20:15:16.783Z,1537992916.783 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakChlTemperature = 0.000000 degC
2018-09-26T20:15:16.794Z,1537992916.794 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakChlLatitude = nan arcdeg
2018-09-26T20:15:16.796Z,1537992916.796 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakChlLongitude = nan arcdeg
2018-09-26T20:15:16.798Z,1537992916.798 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakNO3 = 0.000000 umol/l
2018-09-26T20:15:16.806Z,1537992916.806 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakNO3Depth = 0.000000 m
2018-09-26T20:15:16.808Z,1537992916.808 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakNO3Latitude = nan arcdeg
2018-09-26T20:15:16.814Z,1537992916.814 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakNO3Longitude = nan arcdeg
2018-09-26T20:15:16.821Z,1537992916.821 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchChl = 0.000000 m
2018-09-26T20:15:16.823Z,1537992916.823 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchChlDepth = 0.000000 m
2018-09-26T20:15:16.832Z,1537992916.832 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchChlLatitude = nan arcdeg
2018-09-26T20:15:16.838Z,1537992916.838 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchChlLongitude = nan arcdeg
2018-09-26T20:15:16.840Z,1537992916.840 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchChlDistance = nan m
2018-09-26T20:15:16.855Z,1537992916.855 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakOil = 0.000000 kg/m3
2018-09-26T20:15:16.858Z,1537992916.858 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakOilDepth = 0.000000 m
2018-09-26T20:15:16.860Z,1537992916.860 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakOilLatitude = nan arcdeg
2018-09-26T20:15:16.887Z,1537992916.887 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakOilLongitude = nan arcdeg
2018-09-26T20:15:16.899Z,1537992916.899 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakFDOM = 0.000000 ppb
2018-09-26T20:15:16.905Z,1537992916.905 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakFDOMDepth = 0.000000 m
2018-09-26T20:15:16.908Z,1537992916.908 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakFDOMLatitude = nan arcdeg
2018-09-26T20:15:16.926Z,1537992916.926 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakFDOMLongitude = nan arcdeg
2018-09-26T20:15:16.934Z,1537992916.934 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchFDOMDistance = nan m
2018-09-26T20:15:16.969Z,1537992916.969 [trackPatchFDOM:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-26T20:15:17.039Z,1537992917.039 [trackPatchFDOM:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-26T20:15:17.072Z,1537992917.072 [trackPatchFDOM:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-26T20:15:17.096Z,1537992917.096 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 0.000000 ppb
2018-09-26T20:15:17.110Z,1537992917.110 [trackPatchFDOM:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-26T20:15:17.124Z,1537992917.124 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-26T20:15:17.158Z,1537992917.158 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.PeakDetectFDOMActive = value:1 bool
2018-09-26T20:15:17.160Z,1537992917.160 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.TimeWindowPeakReport = reader:trackPatchFDOM.TimeWindowPeakRpt
2018-09-26T20:15:17.161Z,1537992917.161 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.PatchTracking = value:1 bool
2018-09-26T20:15:17.163Z,1537992917.163 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.LowPassWindowLength = reader:trackPatchFDOM.LowPassWindowLen
2018-09-26T20:15:17.164Z,1537992917.164 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.PeakShallowBound = reader:trackPatchFDOM.PeakShallowBnd
2018-09-26T20:15:17.200Z,1537992917.200 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.PeakDeepBound = reader:trackPatchFDOM.PeakDeepBnd
2018-09-26T20:15:17.201Z,1537992917.201 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.OffPeakFractionHorizontal = reader:trackPatchFDOM.OffPeakFraction
2018-09-26T20:15:17.202Z,1537992917.202 [trackPatchFDOM:K.SetSpeed](DEBUG): Construct.
2018-09-26T20:15:17.205Z,1537992917.205 [trackPatchFDOM:L.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-26T20:15:17.216Z,1537992917.216 [trackPatchFDOM:M.YoYo](DEBUG): Construct YoYo.
2018-09-26T20:15:17.224Z,1537992917.224 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-26T20:15:17.339Z,1537992917.339 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-26T20:15:17.345Z,1537992917.345 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-26T20:15:17.452Z,1537992917.452 [trackPatchFDOM:PatchDetectHorizontal:InLegWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-26T20:15:17.515Z,1537992917.515 [trackPatchFDOM:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-26T20:15:17.737Z,1537992917.737 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Trigger="Tethys/Trigger" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Trigger http://okeanids.mbari.org/tethys/Xml/Trigger.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="trackPatchFDOM">

    <Description>
        Vehicle runs yo-yos, with patch detect enabled for FDOM
        concentration_of_colored_dissolved_organic_matter_in_sea_water_expressed_as_equivalent_mass_fraction_of_quinine_sulfate_dihydrate
        concentration.
    </Description>

<!-- Vehicle safety parameters -->

    <DefineArg Name="MinAltitude"><Description>
        Minimum altitude for the entire mission.
    </Description><Units:meter/><Value>5</Value></DefineArg>

    <DefineArg Name="MaxDepth"><Description>
        Maximum depth for the entire mission.
    </Description><Units:meter/><Value>65</Value></DefineArg>

    <DefineArg Name="MinWaterDepth"><Description>
        Minimum water depth for the entire mission.
    </Description><Units:meter/><Value>10</Value></DefineArg>

    <DefineArg Name="MinOffshore"><Description>
        Minimum offshore distance for the entire mission.
    </Description><Units:meter/><Value>2000</Value></DefineArg>

    <DefineArg Name="NeedCommsTime"><Description>
        Maximum time between surfacings for communications
    </Description><Units:minute/><Value>180</Value></DefineArg>

    <DefineArg Name="MissionTimeout"><Description>
        Timeout for the entire mission
    </Description><Units:hour/><Value>56</Value></DefineArg>

    <DefineArg Name="MassDefault"><Description>
        Static setting for mass during the mission. Defaults to massDefault
        setting in the Config/Control.cfg file.
    </Description><Control:VerticalControl.massDefault/></DefineArg>

    <DefineArg Name="BuoyancyNeutral"><Description>
        Buoyancy bladder position while performing the YoYo behavior. Defaults
        to buoyancyNeutral setting in the Config/Control.cfg file.
    </Description><Control:VerticalControl.buoyancyNeutral/></DefineArg>

<!-- Basic guidance settings -->

    <DefineArg Name="YoYoMinDepth"><Description>
        Minimum depth during yo-yo's.
    </Description><Units:meter/><Value>5.0</Value></DefineArg>

    <DefineArg Name="YoYoMaxDepth"><Description>
        Maximum depth during yo-yo's.
    </Description><Units:meter/><Value>25.0</Value></DefineArg>

    <DefineArg Name="YoYoUpPitch"><Description>
        Pitch when yo-yo's are ascending.
    </Description><Units:degree/><Value>20.0</Value></DefineArg>

    <DefineArg Name="YoYoDownPitch"><Description>
        Pitch when yo-yo's are descending.
    </Description><Units:degree/><Value>-20.0</Value></DefineArg>

    <DefineArg Name="Speed"><Description>
        Vehicle speed.
    </Description><Units:meter_per_second/><Value>1</Value></DefineArg>

    <DefineArg Name="WpMaxDistance"><Description>
        Maximum length of each tracking leg
<!--debug
    </Description><Units:meter/><Value>7500</Value></DefineArg>
-->
    </Description><Units:meter/><Value>1000</Value></DefineArg>

    <DefineArg Name="WpTimeout"><Description>
        Maximum duration of each tracking leg
    </Description><Units:second/><Value>8000</Value></DefineArg>

    <DefineArg Name="WaterFrame"><Description>
        Set WaterFrame true to drive towards waypoints in the water frame of
        reference
    </Description><True/></DefineArg>

    <DefineArg Name="Repeat"><Description>
        Maximum number of tracking legs
    </Description><Units:count/><Value>20</Value></DefineArg>

<!-- Constant settings for each tracking leg -->

    <DefineArg Name="Turn"><Description>
        Amount to turn at each leg
    </Description><Units:degree/><Value>144</Value></DefineArg>

    <DefineArg Name="Reverse"><Description>
        Change in bearing which reverses vehicle direction
    </Description><Units:degree/><Value>180</Value></DefineArg>

    <DefineArg Name="TwoPi"><Description>
        Applied to stop run-up of angles
    </Description><Units:degree/><Value>360</Value></DefineArg>

    <DefineArg Name="TimeWindowPeakRpt"><Description>
        If greater than zero, report a peak every window. If NaN or zero, this
        variable is ignored.
    </Description><Units:minute/><Value>NaN</Value></DefineArg>

<!--debug
    </Description><Units:minute/><Value>1</Value></DefineArg>
-->

    <DefineArg Name="LowPassWindowLen"><Description>
        Low-pass window length (based on depth sensor sampling interval 0.4
        second) for low-pass filtering.
    </Description><Units:count/><Value>20</Value></DefineArg>

    <DefineArg Name="PeakShallowBnd"><Description>
        Shallow depth bound for detecting peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>2</Value></DefineArg>

    <DefineArg Name="PeakDeepBnd"><Description>
        Deep depth bound for detecting peak on each descent or ascent profile.
    </Description><Units:meter/><Value>4</Value></DefineArg>

    <DefineArg Name="FilterWidth"><Description>
        Width of boxcar filter used in horizontal patch detection
    </Description><Units:count/><Value>4</Value></DefineArg>

    <DefineArg Name="BeginThreshold"><Description>
        If non-NaN, sets threshold for starting horizontal patch detection
    </Description><Units:microgram_per_liter/><Value>NaN</Value></DefineArg>

    <DefineArg Name="OffPeakFraction"><Description>
        When filtered horizontal value is this fraction of the peak, consider it
        outside the patch.
    </Description><Units:percent/><Value>80</Value></DefineArg>

    <DefineArg Name="PatchMode"><Description>
        If true, use center of "in peak" range as the turn-around point. If
        false use maximum horizontal peak location as the turn-around point.
    </Description><False/></DefineArg>

    <DefineArg Name="PatchTrackingHorizontal"><Description>
        Set true to turn on horizontal patch tracking
    </Description><True/></DefineArg>

<!-- Variable Settings for each tracking leg -->

    <DefineArg Name="WpBearing"><Description>
        Bearing being followed in the current leg. Set this to initialize start
        direction of patch tracking.
    </Description><Units:degree/><Value>-90</Value></DefineArg>

    <DefineOutput Name="PatchDetectOn"><Description>
        Mission sets this to true when the patch has been crossed.
    </Description><False/></DefineOutput>

    <DefineOutput Name="WpDone"><Description>
        Mission sets this to true when the cross-patch waypoint has been
        reached.
    </Description><False/></DefineOutput>

    <DefineOutput Name="PatchFDOM"><Units:microgram_per_liter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchFDOMDepth"><Units:meter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchFDOMLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchFDOMLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchFDOMDistance"><Units:meter/><Value>0</Value></DefineOutput>

<!-- The timeout -->

    <Timeout Duration="MissionTimeout"/>

<!-- And now the mission -->

    <Guidance:AltitudeEnvelope>
        <Parallel/>
        <Setting><Guidance:AltitudeEnvelope.minAltitude/><Arg Name="MinAltitude"/></Setting>
    </Guidance:AltitudeEnvelope>

    <Guidance:DepthEnvelope>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="MaxDepth"/></Setting>
    </Guidance:DepthEnvelope>

    <Insert Filename="Insert/Surface.xml" Id="SurfaceCommsSplit">
        <RedefineArg Name="SurfacePitch"><Units:degree/><Value>20</Value></RedefineArg>
        <RedefineArg Name="SurfaceSpeed"><Units:meter_per_second/><Value>1</Value></RedefineArg>
        <RedefineArg Name="UnpackSplitAtSurface"><True/></RedefineArg>
    </Insert>

    <Aggregate Id="SurfaceComms">

        <When>
            <Called/>
        </When>

        <Insert Filename="Insert/Surface.xml">
            <RedefineArg Name="SurfacePitch"><Units:degree/><Value>20</Value></RedefineArg>
            <RedefineArg Name="SurfaceSpeed"><Units:meter_per_second/><Value>1</Value></RedefineArg>
        </Insert>

    </Aggregate>

<!-- GPS Update.  Don't go too long w/o a GPS fix. -->

    <Aggregate Id="NeedComms">

        <When>
            <Universal:platform_pitch_angle/>
            <Gt><Units:degree/><Value>0</Value></Gt>
            <And><Elapsed><Universal:time_fix/></Elapsed><Gt><Arg Name="NeedCommsTime"/></Gt></And>
            <Or><Elapsed><Universal:time_fix/></Elapsed><Gt><Arg Name="NeedCommsTime"/><Add><Units:minute/><Value>10</Value></Add></Gt></Or>
        </When>

        <Syslog Severity="Important">NeedComms Timeout Surfacing</Syslog>

        <Call RefId="SurfaceComms"/>

    </Aggregate>

    <Guidance:OffshoreEnvelope>
        <Parallel/>
        <Setting><Guidance:OffshoreEnvelope.minOffshore/><Arg Name="MinOffshore"/></Setting>
    </Guidance:OffshoreEnvelope>

    <Guidance:WaterDepthEnvelope>
        <Parallel/>
        <Setting><Guidance:WaterDepthEnvelope.minWaterDepth/><Arg Name="MinWaterDepth"/></Setting>
    </Guidance:WaterDepthEnvelope>

    <Guidance:Pitch>
        <Parallel/>
        <Setting><Guidance:Pitch.massPosition/><Arg Name="MassDefault"/></Setting>
    </Guidance:Pitch>

    <Guidance:Buoyancy>
        <Parallel/>
        <Setting><Guidance:Buoyancy.position /><Arg Name="BuoyancyNeutral"/></Setting>
    </Guidance:Buoyancy>

<!-- If we're executing here or below, lets' get science data! -->

    <Insert Filename="Insert/Science.xml">
        <RedefineArg Name="PeakDetectFDOMActive"><True/></RedefineArg>
        <RedefineArg Name="TimeWindowPeakReport"><Arg Name="TimeWindowPeakRpt"/></RedefineArg>
        <RedefineArg Name="PatchTracking"><True/></RedefineArg>
        <RedefineArg Name="LowPassWindowLength"><Arg Name="LowPassWindowLen"/></RedefineArg>
        <RedefineArg Name="PeakShallowBound"><Arg Name="PeakShallowBnd"/></RedefineArg>
        <RedefineArg Name="PeakDeepBound"><Arg Name="PeakDeepBnd"/></RedefineArg>
        <RedefineArg Name="OffPeakFractionHorizontal"><Arg Name="OffPeakFraction"/></RedefineArg>
    </Insert>

    <Guidance:SetSpeed>
        <Parallel/>
        <Setting><Guidance:SetSpeed.speed/><Arg Name="Speed"/></Setting>
    </Guidance:SetSpeed>

    <Guidance:DepthEnvelope>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.minDepth/><Arg Name="YoYoMinDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="YoYoMaxDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:DepthEnvelope.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:DepthEnvelope>

    <Guidance:YoYo>
        <Parallel/>
        <Setting><Guidance:YoYo.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:YoYo.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:YoYo>

    <Aggregate Id="PatchDetectHorizontal">

        <Sequence Repeat="Repeat"/>

        <Aggregate Id="PatchDetection">

            <When>
                <Arg Name="PatchDetectOn"/>
            </When>

            <Trigger:PeakDetectHorizontal Id="PeakDetectHorizontalTrigger">
                <Sequence/>
                <Break><Arg Name="WpDone"/>
                </Break>
                <Setting><Trigger:PeakDetectHorizontal.patchTracking/><Arg Name="PatchTrackingHorizontal"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.detectFrom/><Arg Name="Science:PeakFDOM"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.depthFrom/><Arg Name="Science:PeakFDOMDepth"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.latitudeFrom/><Arg Name="Science:PeakFDOMLatitude"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.longitudeFrom/><Arg Name="Science:PeakFDOMLongitude"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.beginThreshold/><Arg Name="BeginThreshold"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.offPeakFraction/><Arg Name="OffPeakFraction"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.filterWidth/><Arg Name="FilterWidth"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.centerPeak/><Arg Name="PatchMode"/></Setting>
                <OutputArg Name="PatchFDOM"><Trigger:PeakDetectHorizontal.peakDetect/></OutputArg>
                <OutputArg Name="PatchFDOMDepth"><Trigger:PeakDetectHorizontal.peakDepth/></OutputArg>
                <OutputArg Name="PatchFDOMLatitude"><Trigger:PeakDetectHorizontal.peakLatitude/></OutputArg>
                <OutputArg Name="PatchFDOMLongitude"><Trigger:PeakDetectHorizontal.peakLongitude/></OutputArg>
                <OutputArg Name="PatchFDOMDistance"><Trigger:PeakDetectHorizontal.peakDistance/></OutputArg>
            </Trigger:PeakDetectHorizontal>

            <Syslog Severity="Important">Fell below OffPeakFraction. Patch value is <Arg Name="PatchFDOM"/><Units:part_per_billion/> at lat = <Arg Name="PatchFDOMLatitude"/><Units:degree/>, lon = <Arg Name="PatchFDOMLongitude"/><Units:degree/>, dep = <Arg Name="PatchFDOMDepth"/><Units:meter/>, distance = <Arg Name="PatchFDOMDistance"/><Units:meter/></Syslog>

            <SendData Service="Express"><Arg Name="PatchFDOM"/><Arg Name="PatchFDOMDepth"/><Arg Name="PatchFDOMLatitude"/><Arg Name="PatchFDOMLongitude"/>
            </SendData>

            <Assign Id="AssignPatchDetectOff"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

        </Aggregate>

        <Assign Id="AssignPatchDetectOn"><Sequence/><Arg Name="PatchDetectOn"/><True/></Assign>

        <Syslog Severity="Important">Next: bearing for CrossLeg: <Arg Name="WpBearing"/><Units:degree/>. WpMaxDistance = <Arg Name="WpMaxDistance"/><Units:meter/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>.</Syslog>

        <Aggregate Id="CrossLeg">

            <Description>
                This is a long leg across the width of the patch. Also the first
                leg in a mission run. Two waypoints run in parallel: a short run
                to the surfacing point, and a longer run to the edge of the
                patch.
            </Description>

            <Sequence/>

            <Break><Arg Name="WpDone"/>
                <Or><Arg Name="PatchDetectOn"/><Eq><False/></Eq></Or>
            </Break>

            <Guidance:Waypoint Id="CrossSurfaceWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="PatchFDOMDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Call RefId="SurfaceComms"/>

            <Guidance:Waypoint Id="CrossPeakWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="WpMaxDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Syslog Severity="Important">CrossPeakWp done. Lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchFDOM"/><Units:part_per_billion/> at lat = <Arg Name="PatchFDOMLatitude"/><Units:degree/>, lon = <Arg Name="PatchFDOMLongitude"/><Units:degree/>, dep = <Arg Name="PatchFDOMDepth"/><Units:meter/>, distance = <Arg Name="PatchFDOMDistance"/><Units:meter/></Syslog>

            <Assign Id="AssignPatchDetectOffInCrossLeg"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

            <Assign Id="AssignWpDoneInCrossLeg"><Sequence/><Arg Name="WpDone"/><True/></Assign>

        </Aggregate>

        <Assign Id="AssignWpBearingForInLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Add><Arg Name="Reverse"/></Add><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

        <Syslog Severity="Important">Next: bearing for InLeg: <Arg Name="WpBearing"/><Units:degree/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchFDOM"/><Units:part_per_billion/> at lat = <Arg Name="PatchFDOMLatitude"/><Units:degree/>, lon = <Arg Name="PatchFDOMLongitude"/><Units:degree/>, dep = <Arg Name="PatchFDOMDepth"/><Units:meter/>, distance = <Arg Name="PatchFDOMDistance"/><Units:meter/></Syslog>

        <Guidance:Waypoint Id="InLegWp">
            <Description>
                Simply drive back towards the patch center
            </Description>
            <Sequence/>
            <Timeout Duration="WpTimeout"/>
            <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="PatchFDOMDistance"/></Setting>
            <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
            <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
        </Guidance:Waypoint>

        <Assign Id="AssignWpBearingForOutLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Sub><Arg Name="Turn"/></Sub><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

        <Syslog Severity="Important">Next: bearing for OutLeg: <Arg Name="WpBearing"/><Units:degree/>. WpMaxDistance = <Arg Name="WpMaxDistance"/><Units:meter/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchFDOM"/><Units:part_per_billion/> at lat = <Arg Name="PatchFDOMLatitude"/><Units:degree/>, lon = <Arg Name="PatchFDOMLongitude"/><Units:degree/>, dep = <Arg Name="PatchFDOMDepth"/><Units:meter/>, distance = <Arg Name="PatchFDOMDistance"/><Units:meter/></Syslog>

        <Call RefId="SurfaceCommsSplit"/>

        <Assign Id="AssignPatchDetectOnForOutLeg"><Sequence/><Arg Name="PatchDetectOn"/><True/></Assign>

        <Aggregate Id="OutLeg">

            <Description>
                Drive outward until edge of patch is detected.
            </Description>

            <Sequence/>

            <Break><Arg Name="WpDone"/>
                <Or><Arg Name="PatchDetectOn"/><Eq><False/></Eq></Or>
            </Break>

            <Guidance:Waypoint Id="OutLegWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="WpMaxDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Assign Id="AssignPatchDetectOffInOutLeg"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

            <Assign Id="AssignWpDoneInOutLeg"><Sequence/><Arg Name="WpDone"/><True/></Assign>

        </Aggregate>

        <Assign Id="AssignWpBearingForCrossLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Add><Arg Name="Reverse"/></Add><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

    </Aggregate>

</Mission>


2018-09-26T20:15:17.738Z,1537992917.738 [CommandLine](IMPORTANT): Loaded ./Missions/Science/trackPatchFDOM.xml
2018-09-26T20:15:30.239Z,1537992930.239 [CommandLine](IMPORTANT): got command set trackPatchFDOM.MaxDepth 15.000000 meter
2018-09-26T20:15:30.240Z,1537992930.240 [CommandLine](IMPORTANT): got command set trackPatchFDOM.MinOffshore 1000.000000 meter
2018-09-26T20:15:30.245Z,1537992930.245 [CommandLine](IMPORTANT): got command set trackPatchFDOM.NeedCommsTime 30.000000 minute
2018-09-26T20:15:30.246Z,1537992930.246 [CommandLine](IMPORTANT): got command set trackPatchFDOM.MissionTimeout 3.000000 hour
2018-09-26T20:15:45.353Z,1537992945.353 [CommandLine](IMPORTANT): got command set trackPatchFDOM.YoYoMinDepth 0.500000 meter
2018-09-26T20:15:45.354Z,1537992945.354 [CommandLine](IMPORTANT): got command set trackPatchFDOM.YoYoMaxDepth 4.000000 meter
2018-09-26T20:15:45.355Z,1537992945.355 [CommandLine](IMPORTANT): got command set trackPatchFDOM.WpMaxDistance 800.000000 meter
2018-09-26T20:15:45.356Z,1537992945.356 [CommandLine](IMPORTANT): got command set trackPatchFDOM.WpTimeout 30.000000 minute
2018-09-26T20:15:45.356Z,1537992945.356 [CommandLine](IMPORTANT): got command set trackPatchFDOM.LowPassWindowLen 7.000000 count
2018-09-26T20:15:58.429Z,1537992958.429 [CommandLine](IMPORTANT): got command set trackPatchFDOM.PeakShallowBnd 0.500000 meter
2018-09-26T20:15:58.430Z,1537992958.430 [CommandLine](IMPORTANT): got command set trackPatchFDOM.PeakDeepBnd 3.700000 meter
2018-09-26T20:15:58.431Z,1537992958.431 [CommandLine](IMPORTANT): got command set trackPatchFDOM.FilterWidth 2.000000 count
2018-09-26T20:15:58.432Z,1537992958.432 [CommandLine](IMPORTANT): got command run 
2018-09-26T20:15:58.438Z,1537992958.438 [CommandLine](IMPORTANT): Running 
2018-09-26T20:15:58.776Z,1537992958.776 [Default] Stopped
2018-09-26T20:15:58.777Z,1537992958.777 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-26T20:15:58.777Z,1537992958.777 [Default:B.GoToSurface] Stopped
2018-09-26T20:15:58.777Z,1537992958.777 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-26T20:15:58.777Z,1537992958.777 [Default:CheckIn] Stopped
2018-09-26T20:15:58.777Z,1537992958.777 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-26T20:15:58.777Z,1537992958.777 [Default:CheckIn:Read_GPS] Stopped
2018-09-26T20:15:58.777Z,1537992958.777 [MissionManager](IMPORTANT): Started mission trackPatchFDOM
2018-09-26T20:15:58.778Z,1537992958.778 [trackPatchFDOM] Running Loop=1
2018-09-26T20:15:58.778Z,1537992958.778 [trackPatchFDOM](DEBUG): Aggregate::initialize trackPatchFDOM
2018-09-26T20:15:58.778Z,1537992958.778 [trackPatchFDOM:A.AltitudeEnvelope] Running Loop=1
2018-09-26T20:15:58.778Z,1537992958.778 [trackPatchFDOM:A.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-26T20:15:58.778Z,1537992958.778 [trackPatchFDOM:B.DepthEnvelope] Running Loop=1
2018-09-26T20:15:58.778Z,1537992958.778 [trackPatchFDOM:B.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-26T20:15:58.778Z,1537992958.778 [trackPatchFDOM:F.OffshoreEnvelope] Running Loop=1
2018-09-26T20:15:58.779Z,1537992958.779 [trackPatchFDOM:F.OffshoreEnvelope](DEBUG): Initialize OffshoreEnvelopeComponent.
2018-09-26T20:15:58.779Z,1537992958.779 [trackPatchFDOM:G.WaterDepthEnvelope] Running Loop=1
2018-09-26T20:15:58.779Z,1537992958.779 [trackPatchFDOM:G.WaterDepthEnvelope](DEBUG): Initialize WaterDepthEnvelopeComponent.
2018-09-26T20:15:58.779Z,1537992958.779 [trackPatchFDOM:H.Pitch] Running Loop=1
2018-09-26T20:15:58.779Z,1537992958.779 [trackPatchFDOM:H.Pitch](DEBUG): Initialize.
2018-09-26T20:15:58.779Z,1537992958.779 [trackPatchFDOM:I.Buoyancy] Running Loop=1
2018-09-26T20:15:58.779Z,1537992958.779 [trackPatchFDOM:I.Buoyancy](DEBUG): Initialize Buoyancy Component.
2018-09-26T20:15:58.779Z,1537992958.779 [trackPatchFDOM:Science] Running Loop=1
2018-09-26T20:15:58.779Z,1537992958.779 [trackPatchFDOM:Science](DEBUG): Aggregate::initialize trackPatchFDOM:Science
2018-09-26T20:15:58.780Z,1537992958.780 [trackPatchFDOM:Science:A] Running Loop=1
2018-09-26T20:15:58.780Z,1537992958.780 [trackPatchFDOM:Science:B] Running Loop=1
2018-09-26T20:15:58.780Z,1537992958.780 [trackPatchFDOM:Science:C] Running Loop=1
2018-09-26T20:15:58.780Z,1537992958.780 [trackPatchFDOM:Science:D] Running Loop=1
2018-09-26T20:15:58.780Z,1537992958.780 [trackPatchFDOM:Science:E] Running Loop=1
2018-09-26T20:15:58.780Z,1537992958.780 [trackPatchFDOM:Science:F] Running Loop=1
2018-09-26T20:15:58.780Z,1537992958.780 [trackPatchFDOM:Science:G] Running Loop=1
2018-09-26T20:15:58.780Z,1537992958.780 [trackPatchFDOM:Science:Read_Oil] Running Loop=1
2018-09-26T20:15:58.780Z,1537992958.780 [trackPatchFDOM:Science:PeakDetectChl] Running Loop=1
2018-09-26T20:15:58.780Z,1537992958.780 [trackPatchFDOM:Science:PeakDetectChl](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectChl
2018-09-26T20:15:58.781Z,1537992958.781 [trackPatchFDOM:Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T20:15:58.781Z,1537992958.781 [trackPatchFDOM:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T20:15:58.782Z,1537992958.782 [trackPatchFDOM:Science:HighestChlPeakReport] Running Loop=1
2018-09-26T20:15:58.782Z,1537992958.782 [trackPatchFDOM:Science:HighestChlPeakReport](DEBUG): Aggregate::initialize trackPatchFDOM:Science:HighestChlPeakReport
2018-09-26T20:15:58.782Z,1537992958.782 [trackPatchFDOM:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2018-09-26T20:15:58.782Z,1537992958.782 [trackPatchFDOM:Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2018-09-26T20:15:58.783Z,1537992958.783 [trackPatchFDOM:Science:PeakDetectNO3] Running Loop=1
2018-09-26T20:15:58.783Z,1537992958.783 [trackPatchFDOM:Science:PeakDetectNO3](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectNO3
2018-09-26T20:15:58.783Z,1537992958.783 [trackPatchFDOM:Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T20:15:58.783Z,1537992958.783 [trackPatchFDOM:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T20:15:58.784Z,1537992958.784 [trackPatchFDOM:Science:PeakDetectOil] Running Loop=1
2018-09-26T20:15:58.784Z,1537992958.784 [trackPatchFDOM:Science:PeakDetectOil](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectOil
2018-09-26T20:15:58.797Z,1537992958.797 [trackPatchFDOM:Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T20:15:58.797Z,1537992958.797 [trackPatchFDOM:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T20:15:58.802Z,1537992958.802 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T20:15:58.802Z,1537992958.802 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T20:15:58.802Z,1537992958.802 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T20:15:58.802Z,1537992958.802 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T20:15:58.803Z,1537992958.803 [trackPatchFDOM:K.SetSpeed] Running Loop=1
2018-09-26T20:15:58.803Z,1537992958.803 [trackPatchFDOM:K.SetSpeed](DEBUG): Initialize.
2018-09-26T20:15:58.803Z,1537992958.803 [trackPatchFDOM:L.DepthEnvelope] Running Loop=1
2018-09-26T20:15:58.804Z,1537992958.804 [trackPatchFDOM:L.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-26T20:15:58.804Z,1537992958.804 [trackPatchFDOM:M.YoYo] Running Loop=1
2018-09-26T20:15:58.804Z,1537992958.804 [trackPatchFDOM:M.YoYo](DEBUG): Initialize YoYoComponent.
2018-09-26T20:15:58.804Z,1537992958.804 [trackPatchFDOM:SurfaceCommsSplit] Running Loop=1
2018-09-26T20:15:58.804Z,1537992958.804 [trackPatchFDOM:SurfaceCommsSplit](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceCommsSplit
2018-09-26T20:15:58.805Z,1537992958.805 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface] Running Loop=1
2018-09-26T20:15:58.805Z,1537992958.805 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-26T20:15:58.805Z,1537992958.805 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-26T20:15:58.806Z,1537992958.806 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-26T20:15:58.806Z,1537992958.806 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-26T20:15:58.806Z,1537992958.806 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-26T20:15:58.807Z,1537992958.807 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-26T20:15:58.808Z,1537992958.808 [trackPatchFDOM:M.YoYo] Running Loop=1
2018-09-26T20:15:58.810Z,1537992958.810 [trackPatchFDOM:L.DepthEnvelope] Running Loop=1
2018-09-26T20:15:58.811Z,1537992958.811 [trackPatchFDOM:K.SetSpeed] Running Loop=1
2018-09-26T20:15:58.812Z,1537992958.812 [trackPatchFDOM:Science] Running Loop=1
2018-09-26T20:15:58.832Z,1537992958.832 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T20:15:58.837Z,1537992958.837 [trackPatchFDOM:Science:PeakDetectOil] Stopped
2018-09-26T20:15:58.837Z,1537992958.837 [trackPatchFDOM:Science:PeakDetectOil](DEBUG): Aggregate::uninitialize trackPatchFDOM:Science:PeakDetectOil
2018-09-26T20:15:58.837Z,1537992958.837 [trackPatchFDOM:Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2018-09-26T20:15:58.837Z,1537992958.837 [trackPatchFDOM:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T20:15:58.837Z,1537992958.837 [trackPatchFDOM:Science:PeakDetectNO3] Stopped
2018-09-26T20:15:58.838Z,1537992958.838 [trackPatchFDOM:Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize trackPatchFDOM:Science:PeakDetectNO3
2018-09-26T20:15:58.838Z,1537992958.838 [trackPatchFDOM:Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2018-09-26T20:15:58.838Z,1537992958.838 [trackPatchFDOM:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T20:15:58.838Z,1537992958.838 [trackPatchFDOM:Science:HighestChlPeakReport] Stopped
2018-09-26T20:15:58.838Z,1537992958.838 [trackPatchFDOM:Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize trackPatchFDOM:Science:HighestChlPeakReport
2018-09-26T20:15:58.838Z,1537992958.838 [trackPatchFDOM:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2018-09-26T20:15:58.838Z,1537992958.838 [trackPatchFDOM:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-26T20:15:58.838Z,1537992958.838 [trackPatchFDOM:Science:PeakDetectChl] Stopped
2018-09-26T20:15:58.838Z,1537992958.838 [trackPatchFDOM:Science:PeakDetectChl](DEBUG): Aggregate::uninitialize trackPatchFDOM:Science:PeakDetectChl
2018-09-26T20:15:58.838Z,1537992958.838 [trackPatchFDOM:Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2018-09-26T20:15:58.838Z,1537992958.838 [trackPatchFDOM:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T20:15:58.839Z,1537992958.839 [trackPatchFDOM:Science:Read_Oil] Running Loop=1
2018-09-26T20:15:58.839Z,1537992958.839 [trackPatchFDOM:Science:Read_Oil](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-26T20:15:58.840Z,1537992958.840 [trackPatchFDOM:Science:G] Stopped
2018-09-26T20:15:58.840Z,1537992958.840 [trackPatchFDOM:Science:F] Stopped
2018-09-26T20:15:58.840Z,1537992958.840 [trackPatchFDOM:Science:E] Stopped
2018-09-26T20:15:58.840Z,1537992958.840 [trackPatchFDOM:Science:D] Stopped
2018-09-26T20:15:58.840Z,1537992958.840 [trackPatchFDOM:Science:C] Running Loop=1
2018-09-26T20:15:58.843Z,1537992958.843 [trackPatchFDOM:Science:C](DEBUG): Initialize ReadDataComponent to sense sea_water_temperature
2018-09-26T20:15:58.843Z,1537992958.843 [trackPatchFDOM:Science:C](DEBUG): Initialize ReadDataComponent to sense sea_water_salinity
2018-09-26T20:15:58.844Z,1537992958.844 [trackPatchFDOM:Science:B] Stopped
2018-09-26T20:15:58.844Z,1537992958.844 [trackPatchFDOM:Science:A] Running Loop=1
2018-09-26T20:15:58.853Z,1537992958.853 [trackPatchFDOM:Science:A](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_oxygen_in_sea_water
2018-09-26T20:15:58.854Z,1537992958.854 [trackPatchFDOM:I.Buoyancy] Running Loop=1
2018-09-26T20:15:58.855Z,1537992958.855 [trackPatchFDOM:H.Pitch] Running Loop=1
2018-09-26T20:15:58.856Z,1537992958.856 [trackPatchFDOM:G.WaterDepthEnvelope] Running Loop=1
2018-09-26T20:15:58.862Z,1537992958.862 [trackPatchFDOM:F.OffshoreEnvelope] Running Loop=1
2018-09-26T20:15:58.871Z,1537992958.871 [trackPatchFDOM:SurfaceCommsSplit:B] Running Loop=1
2018-09-26T20:15:58.872Z,1537992958.872 [trackPatchFDOM:SurfaceCommsSplit:B](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceCommsSplit:B
2018-09-26T20:15:58.872Z,1537992958.872 [trackPatchFDOM:SurfaceCommsSplit:B:A] Running Loop=1
2018-09-26T20:15:58.872Z,1537992958.872 [trackPatchFDOM:B.DepthEnvelope] Running Loop=1
2018-09-26T20:15:58.897Z,1537992958.897 [trackPatchFDOM:A.AltitudeEnvelope] Running Loop=1
2018-09-26T20:15:58.913Z,1537992958.913 [CTD_NeilBrown](INFO): Opening uart, block timeout 10ths=4
2018-09-26T20:15:59.037Z,1537992959.037 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:15:59.123Z,1537992959.123 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-26T20:15:59.123Z,1537992959.123 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-26T20:15:59.171Z,1537992959.171 [trackPatchFDOM:SurfaceCommsSplit:B:A](INFO): ##UnpackSplit##
2018-09-26T20:15:59.172Z,1537992959.172 [trackPatchFDOM:SurfaceCommsSplit:B:A] Stopped
2018-09-26T20:15:59.172Z,1537992959.172 [trackPatchFDOM:SurfaceCommsSplit:B](INFO): Completed trackPatchFDOM:SurfaceCommsSplit:B
2018-09-26T20:15:59.172Z,1537992959.172 [trackPatchFDOM:SurfaceCommsSplit:B] Stopped
2018-09-26T20:15:59.172Z,1537992959.172 [trackPatchFDOM:SurfaceCommsSplit:B](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceCommsSplit:B
2018-09-26T20:15:59.181Z,1537992959.181 [trackPatchFDOM:SurfaceCommsSplit:C] Running Loop=1
2018-09-26T20:15:59.181Z,1537992959.181 [trackPatchFDOM:SurfaceCommsSplit:C](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceCommsSplit:C
2018-09-26T20:15:59.181Z,1537992959.181 [trackPatchFDOM:SurfaceCommsSplit:C:A] Running Loop=1
2018-09-26T20:15:59.445Z,1537992959.445 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:15:59.572Z,1537992959.572 [trackPatchFDOM:M.YoYo] Preempted
2018-09-26T20:15:59.572Z,1537992959.572 [trackPatchFDOM:L.DepthEnvelope] Preempted
2018-09-26T20:15:59.577Z,1537992959.577 [trackPatchFDOM:K.SetSpeed] Preempted
2018-09-26T20:15:59.577Z,1537992959.577 [trackPatchFDOM:Science] Preempted
2018-09-26T20:15:59.577Z,1537992959.577 [trackPatchFDOM:Science:A] Preempted
2018-09-26T20:15:59.577Z,1537992959.577 [trackPatchFDOM:Science:C] Preempted
2018-09-26T20:15:59.577Z,1537992959.577 [trackPatchFDOM:Science:Read_Oil] Preempted
2018-09-26T20:15:59.577Z,1537992959.577 [trackPatchFDOM:Science:PeakDetectFDOM] Preempted
2018-09-26T20:15:59.577Z,1537992959.577 [trackPatchFDOM:I.Buoyancy] Preempted
2018-09-26T20:15:59.577Z,1537992959.577 [trackPatchFDOM:H.Pitch] Preempted
2018-09-26T20:15:59.577Z,1537992959.577 [trackPatchFDOM:G.WaterDepthEnvelope] Preempted
2018-09-26T20:15:59.577Z,1537992959.577 [trackPatchFDOM:F.OffshoreEnvelope] Preempted
2018-09-26T20:15:59.578Z,1537992959.578 [trackPatchFDOM:SurfaceCommsSplit:C:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-26T20:15:59.857Z,1537992959.857 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T20:16:01.289Z,1537992961.289 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-26T20:16:02.801Z,1537992962.801 [Aanderaa_O2](INFO): Powering down
2018-09-26T20:17:00.766Z,1537993020.766 [DataOverHttps](IMPORTANT): SBD MTMSN=20180926T201701
2018-09-26T20:17:04.961Z,1537993024.961 [DataOverHttps](INFO): Received command:configSet Express linearApproximation concentration_of_colored_dissolved_organic_matter_in_sea_water_expressed_as_equivalent_mass_fraction_of_quinine_sulfate_dihydrate persist
2018-09-26T20:17:09.315Z,1537993029.315 [CommandLine](IMPORTANT): got command configSet Express linearApproximation concentration_of_colored_dissolved_organic_matter_in_sea_water_expressed_as_equivalent_mass_fraction_of_quinine_sulfate_dihydrate persist
2018-09-26T20:17:09.315Z,1537993029.315 [CommandLine](FAULT): Configuring LinearApproxWriter with NULL parameter value
2018-09-26T20:17:55.462Z,1537993075.462 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-26T20:17:55.462Z,1537993075.462 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-3268,-32768,V
2018-09-26T20:19:17.418Z,1537993157.418 [NAL9602](FAULT): GPS failed to acquire within timeout.
2018-09-26T20:19:17.418Z,1537993157.418 [NAL9602] Data Fault, FailCount= 1
2018-09-26T20:19:17.419Z,1537993157.419 [NAL9602](ERROR): Data Fault
2018-09-26T20:19:17.518Z,1537993157.518 [CBIT](ERROR): Data Fault in component: NAL9602
2018-09-26T20:19:17.830Z,1537993157.830 [NAL9602](INFO): Powering down
2018-09-26T20:19:18.677Z,1537993158.677 [CBIT](INFO): Clearing failed state for component NAL9602
2018-09-26T20:19:18.677Z,1537993158.677 [NAL9602] No Fault, FailCount= 1
2018-09-26T20:19:26.743Z,1537993166.743 [DataOverHttps](IMPORTANT): SBD MTMSN=20180926T201927
2018-09-26T20:19:31.096Z,1537993171.096 [DataOverHttps](INFO): Received command:configSet Express linearApproximation concentration_of_colored_dissolved_organic_matter_in_sea_water_expressed_as_equivalent_mass_fraction_of_quinine_sulfate_dihydrate 1 ppb persist
2018-09-26T20:19:35.446Z,1537993175.446 [CommandLine](IMPORTANT): got command configSet Express linearApproximation concentration_of_colored_dissolved_organic_matter_in_sea_water_expressed_as_equivalent_mass_fraction_of_quinine_sulfate_dihydrate 1.000000 part_per_billion persist
2018-09-26T20:19:47.984Z,1537993187.984 [NAL9602](INFO): Powering up NAL9602
2018-09-26T20:19:59.183Z,1537993199.183 [NAL9602](INFO): NAL9602 initialized
2018-09-26T20:22:58.086Z,1537993378.086 [CommandLine](IMPORTANT): got command show stack
2018-09-26T20:22:58.086Z,1537993378.086 [CommandLine](IMPORTANT): Behavior Stack:

2018-09-26T20:22:58.086Z,1537993378.086 [trackPatchFDOM](IMPORTANT): Priority 0: trackPatchFDOM:A.AltitudeEnvelope
2018-09-26T20:22:58.087Z,1537993378.087 [trackPatchFDOM](IMPORTANT): Priority 1: trackPatchFDOM:B.DepthEnvelope
2018-09-26T20:22:58.087Z,1537993378.087 [trackPatchFDOM:SurfaceCommsSplit](IMPORTANT): Priority 2: trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface
2018-09-26T20:22:58.087Z,1537993378.087 [trackPatchFDOM:SurfaceCommsSplit:C](IMPORTANT): Priority 3: trackPatchFDOM:SurfaceCommsSplit:C:A
2018-09-26T20:24:36.730Z,1537993476.730 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-26T20:24:36.730Z,1537993476.730 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-2768,V
2018-09-26T20:25:08.087Z,1537993508.087 [RDI_Pathfinder](ERROR): Failed to parse:
:HM,G,D,0e8d,0ffe, 15.390, -0.049, 0.000
2018-09-26T20:27:56.120Z,1537993676.120 [CommandLine](IMPORTANT): got command failComponent
2018-09-26T20:27:56.120Z,1537993676.120 [CommandLine](IMPORTANT): Failed components:
2018-09-26T20:27:56.121Z,1537993676.121 [CommandLine](IMPORTANT): No failed Components.
2018-09-26T20:29:28.479Z,1537993768.479 [CommandLine](IMPORTANT): got command show stack
2018-09-26T20:29:28.480Z,1537993768.480 [CommandLine](IMPORTANT): Behavior Stack:

2018-09-26T20:29:28.480Z,1537993768.480 [trackPatchFDOM](IMPORTANT): Priority 0: trackPatchFDOM:A.AltitudeEnvelope
2018-09-26T20:29:28.480Z,1537993768.480 [trackPatchFDOM](IMPORTANT): Priority 1: trackPatchFDOM:B.DepthEnvelope
2018-09-26T20:29:28.481Z,1537993768.481 [trackPatchFDOM:SurfaceCommsSplit](IMPORTANT): Priority 2: trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface
2018-09-26T20:29:28.481Z,1537993768.481 [trackPatchFDOM:SurfaceCommsSplit:C](IMPORTANT): Priority 3: trackPatchFDOM:SurfaceCommsSplit:C:A
2018-09-26T20:29:49.046Z,1537993789.046 [NAL9602](INFO): GPS fix at 20180926T202948: (36.812798, -121.826698)
2018-09-26T20:29:49.084Z,1537993789.084 [trackPatchFDOM:SurfaceCommsSplit:C:A] Stopped
2018-09-26T20:29:49.109Z,1537993789.109 [trackPatchFDOM:SurfaceCommsSplit:C:B] Running Loop=1
2018-09-26T20:29:49.525Z,1537993789.525 [trackPatchFDOM:SurfaceCommsSplit:C:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-26T20:29:54.891Z,1537993794.891 [DataOverHttps](INFO): Sending 226 bytes from file Logs/20180926T190706/Courier0030.lzma
2018-09-26T20:29:55.662Z,1537993795.662 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Courier0030.lzma.bak
2018-09-26T20:29:55.662Z,1537993795.662 [DataOverHttps](INFO): SBD MOMSN=8601568
2018-09-26T20:30:04.707Z,1537993804.707 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180926T190706/Courier0033.lzma
2018-09-26T20:30:05.466Z,1537993805.466 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Courier0033.lzma.bak
2018-09-26T20:30:05.466Z,1537993805.466 [DataOverHttps](INFO): SBD MOMSN=8601571
2018-09-26T20:30:14.962Z,1537993814.962 [DataOverHttps](INFO): Sending 1914 bytes from file Logs/20180926T190706/Express0031.lzma
2018-09-26T20:30:15.718Z,1537993815.718 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Express0031.lzma.bak
2018-09-26T20:30:15.718Z,1537993815.718 [DataOverHttps](INFO): SBD MOMSN=8601573
2018-09-26T20:30:21.042Z,1537993821.042 [NAL9602](INFO): Powering down
2018-09-26T20:30:26.180Z,1537993826.180 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180926T190706/Express0034.lzma
2018-09-26T20:30:26.934Z,1537993826.934 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Express0034.lzma.bak
2018-09-26T20:30:26.935Z,1537993826.935 [DataOverHttps](INFO): SBD MOMSN=8601642
2018-09-26T20:30:27.702Z,1537993827.702 [trackPatchFDOM:SurfaceCommsSplit:C:B] Stopped
2018-09-26T20:30:27.702Z,1537993827.702 [trackPatchFDOM:SurfaceCommsSplit:C:C] Running Loop=1
2018-09-26T20:30:27.839Z,1537993827.839 [trackPatchFDOM:SurfaceCommsSplit:C:C](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-26T20:30:31.013Z,1537993831.013 [NAL9602](INFO): Powering up
2018-09-26T20:30:41.971Z,1537993841.971 [NAL9602](INFO): NAL9602 initialized
2018-09-26T20:30:55.564Z,1537993855.564 [NAL9602](INFO): SBD MO Status=0, MOMSN=1735, MT Status=0, MTMSN=0
2018-09-26T20:30:55.564Z,1537993855.564 [NAL9602](INFO): No messages in MT queue
2018-09-26T20:33:10.039Z,1537993990.039 [RDI_Pathfinder](ERROR): only read 3 of 5 data items
2018-09-26T20:33:10.040Z,1537993990.040 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-

2018-09-26T20:33:28.707Z,1537994008.707 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for altitude
2018-09-26T20:33:28.707Z,1537994008.707 [RDI_Pathfinder](ERROR): Failed to parse:
:BD,        +0.00,     ,        +0.00,   0.00,2809.65
2018-09-26T20:34:39.020Z,1537994079.020 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-32768,V
2018-09-26T20:35:34.333Z,1537994134.333 [CommandLine](IMPORTANT): got command failComponent
2018-09-26T20:35:34.333Z,1537994134.333 [CommandLine](IMPORTANT): Failed components:
2018-09-26T20:35:34.333Z,1537994134.333 [CommandLine](IMPORTANT): No failed Components.
2018-09-26T20:35:46.075Z,1537994146.075 [CommandLine](IMPORTANT): got command show variable gps
2018-09-26T20:35:46.097Z,1537994146.097 [CommandLine](IMPORTANT): NAL9602.gpsFailTimeout (minute)
2018-09-26T20:35:46.211Z,1537994146.211 [CommandLine](IMPORTANT): Default:CheckIn:Read_GPS.durationOfLastRun (second)
2018-09-26T20:36:04.918Z,1537994164.918 [CommandLine](IMPORTANT): got command get NAL9602.gpsFailTimeout
2018-09-26T20:36:04.919Z,1537994164.919 [CommandLine](IMPORTANT): NAL9602.gpsFailTimeout 10.000000 min
2018-09-26T20:36:59.913Z,1537994219.913 [DataOverHttps](IMPORTANT): SBD MTMSN=20180926T203700
2018-09-26T20:37:04.076Z,1537994224.076 [DataOverHttps](INFO): Received command:configSet NAL9602.gpsFailTimeout 5 minute persist
2018-09-26T20:37:04.370Z,1537994224.370 [CommandLine](IMPORTANT): got command configSet NAL9602.gpsFailTimeout 5.000000 minute persist
2018-09-26T20:37:04.379Z,1537994224.379 [NAL9602](FAULT): GPS failed to acquire within timeout.
2018-09-26T20:37:04.380Z,1537994224.380 [NAL9602] Data Fault, FailCount= 1
2018-09-26T20:37:04.380Z,1537994224.380 [NAL9602](ERROR): Data Fault
2018-09-26T20:37:04.474Z,1537994224.474 [CBIT](ERROR): Data Fault in component: NAL9602
2018-09-26T20:37:04.529Z,1537994224.529 [NAL9602](INFO): Powering down
2018-09-26T20:37:05.391Z,1537994225.391 [CBIT](INFO): Clearing failed state for component NAL9602
2018-09-26T20:37:05.391Z,1537994225.391 [NAL9602] No Fault, FailCount= 1
2018-09-26T20:37:34.894Z,1537994254.894 [NAL9602](INFO): Powering up NAL9602
2018-09-26T20:37:45.826Z,1537994265.826 [NAL9602](INFO): NAL9602 initialized
2018-09-26T20:38:03.872Z,1537994283.872 [RDI_Pathfinder](ERROR): Failed to parse:
:BE,-32768,-32768,-32768,V
2018-09-26T20:42:48.511Z,1537994568.510 [NAL9602](FAULT): GPS failed to acquire within timeout.
2018-09-26T20:42:48.511Z,1537994568.511 [NAL9602] Data Fault, FailCount= 2
2018-09-26T20:42:48.511Z,1537994568.511 [NAL9602](ERROR): Data Fault
2018-09-26T20:42:48.606Z,1537994568.606 [CBIT](ERROR): Data Fault in component: NAL9602
2018-09-26T20:42:48.914Z,1537994568.914 [NAL9602](INFO): Powering down
2018-09-26T20:42:49.798Z,1537994569.798 [CBIT](INFO): Clearing failed state for component NAL9602
2018-09-26T20:42:49.798Z,1537994569.798 [NAL9602] No Fault, FailCount= 2
2018-09-26T20:43:19.066Z,1537994599.066 [NAL9602](INFO): Powering up NAL9602
2018-09-26T20:43:32.159Z,1537994612.159 [NAL9602](INFO): NAL9602 initialized
2018-09-26T20:44:36.431Z,1537994676.431 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for altitude
2018-09-26T20:44:36.431Z,1537994676.431 [RDI_Pathfinder](ERROR): Failed to parse:
:BD,        +0.   +0.00,        +0.00,   0.00,3476.48
2018-09-26T20:48:33.463Z,1537994913.463 [NAL9602](FAULT): GPS failed to acquire within timeout.
2018-09-26T20:48:33.463Z,1537994913.463 [NAL9602] Data Fault, FailCount= 3
2018-09-26T20:48:33.463Z,1537994913.463 [NAL9602](ERROR): Data Fault
2018-09-26T20:48:33.560Z,1537994913.560 [CBIT](ERROR): Data Fault in component: NAL9602
2018-09-26T20:48:33.870Z,1537994913.870 [NAL9602](INFO): Powering down
2018-09-26T20:48:34.742Z,1537994914.742 [CBIT](INFO): Clearing failed state for component NAL9602
2018-09-26T20:48:34.742Z,1537994914.742 [NAL9602] No Fault, FailCount= 3
2018-09-26T20:49:04.022Z,1537994944.022 [NAL9602](INFO): Powering up NAL9602
2018-09-26T20:49:14.814Z,1537994954.814 [NAL9602](INFO): NAL9602 initialized
2018-09-26T20:49:24.168Z,1537994964.168 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-32768,V
2018-09-26T20:54:17.410Z,1537995257.410 [NAL9602](FAULT): GPS failed to acquire within timeout.
2018-09-26T20:54:17.410Z,1537995257.410 [NAL9602] Data Fault, FailCount= 4
2018-09-26T20:54:17.411Z,1537995257.411 [NAL9602](ERROR): Data Fault
2018-09-26T20:54:17.498Z,1537995257.498 [CBIT](ERROR): Data Fault in component: NAL9602
2018-09-26T20:54:17.806Z,1537995257.806 [NAL9602](INFO): Powering down
2018-09-26T20:54:18.692Z,1537995258.692 [CBIT](INFO): Clearing failed state for component NAL9602
2018-09-26T20:54:18.692Z,1537995258.692 [NAL9602] No Fault, FailCount= 4
2018-09-26T20:54:48.054Z,1537995288.054 [NAL9602](INFO): Powering up NAL9602
2018-09-26T20:54:58.862Z,1537995298.862 [NAL9602](INFO): NAL9602 initialized
2018-09-26T20:55:54.226Z,1537995354.226 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-26T20:55:54.226Z,1537995354.226 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,18092-0.1,   0.0,1448.9,  0
2018-09-26T20:56:04.243Z,1537995364.243 [RDI_Pathfinder](ERROR): Failed to parse:
:HM,G,D,0e8d,0ffe,*15.356,*-0.058,*0.000
2018-09-26T21:00:00.678Z,1537995600.678 [NAL9602](FAULT): GPS failed to acquire within timeout.
2018-09-26T21:00:00.678Z,1537995600.678 [NAL9602] Data Fault, FailCount= 5
2018-09-26T21:00:00.678Z,1537995600.678 [NAL9602](ERROR): Data Fault
2018-09-26T21:00:00.784Z,1537995600.784 [CBIT](ERROR): Data Fault in component: NAL9602
2018-09-26T21:00:00.784Z,1537995600.784 [CBIT](CRITICAL): Data Fault in component: NAL9602
2018-09-26T21:00:01.083Z,1537995601.083 [NAL9602](INFO): Powering down
2018-09-26T21:00:01.159Z,1537995601.159 [CommandLine](FAULT): Scheduling is paused
2018-09-26T21:00:01.160Z,1537995601.160 [CBIT](INFO): Critical error at 20180926T210000
2018-09-26T21:00:01.160Z,1537995601.160 [Supervisor](INFO): Stop Mission called by CBIT::checkCriticals
2018-09-26T21:00:01.527Z,1537995601.527 [MissionManager](INFO): MissionManager is completed.
2018-09-26T21:00:01.527Z,1537995601.527 [MissionManager](INFO): Uninitializing Mission trackPatchFDOM
2018-09-26T21:00:01.527Z,1537995601.527 [trackPatchFDOM] Stopped
2018-09-26T21:00:01.527Z,1537995601.527 [trackPatchFDOM](DEBUG): Aggregate::uninitialize trackPatchFDOM
2018-09-26T21:00:01.527Z,1537995601.527 [trackPatchFDOM:A.AltitudeEnvelope] Stopped
2018-09-26T21:00:01.528Z,1537995601.528 [trackPatchFDOM:A.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-26T21:00:01.528Z,1537995601.528 [trackPatchFDOM:B.DepthEnvelope] Stopped
2018-09-26T21:00:01.528Z,1537995601.528 [trackPatchFDOM:B.DepthEnvelope](DEBUG): Uninitialize.
2018-09-26T21:00:01.528Z,1537995601.528 [trackPatchFDOM:SurfaceCommsSplit] Stopped
2018-09-26T21:00:01.528Z,1537995601.528 [trackPatchFDOM:SurfaceCommsSplit](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceCommsSplit
2018-09-26T21:00:01.528Z,1537995601.528 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface] Stopped
2018-09-26T21:00:01.528Z,1537995601.528 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-26T21:00:01.528Z,1537995601.528 [trackPatchFDOM:SurfaceCommsSplit:C] Stopped
2018-09-26T21:00:01.528Z,1537995601.528 [trackPatchFDOM:SurfaceCommsSplit:C](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceCommsSplit:C
2018-09-26T21:00:01.528Z,1537995601.528 [trackPatchFDOM:SurfaceCommsSplit:C:C] Stopped
2018-09-26T21:00:01.528Z,1537995601.528 [trackPatchFDOM:F.OffshoreEnvelope] Stopped
2018-09-26T21:00:01.533Z,1537995601.533 [trackPatchFDOM:F.OffshoreEnvelope](DEBUG): Uninitialize OffshoreEnvelopeComponent.
2018-09-26T21:00:01.533Z,1537995601.533 [trackPatchFDOM:G.WaterDepthEnvelope] Stopped
2018-09-26T21:00:01.533Z,1537995601.533 [trackPatchFDOM:G.WaterDepthEnvelope](DEBUG): Uninitialize WaterDepthEnvelopeComponent.
2018-09-26T21:00:01.533Z,1537995601.533 [trackPatchFDOM:H.Pitch] Stopped
2018-09-26T21:00:01.533Z,1537995601.533 [trackPatchFDOM:I.Buoyancy] Stopped
2018-09-26T21:00:01.533Z,1537995601.533 [trackPatchFDOM:I.Buoyancy](DEBUG): Uninitialize Buoyancy Component.
2018-09-26T21:00:01.533Z,1537995601.533 [trackPatchFDOM:Science] Stopped
2018-09-26T21:00:01.533Z,1537995601.533 [trackPatchFDOM:Science](DEBUG): Aggregate::uninitialize trackPatchFDOM:Science
2018-09-26T21:00:01.533Z,1537995601.533 [trackPatchFDOM:Science:A] Stopped
2018-09-26T21:00:01.534Z,1537995601.534 [trackPatchFDOM:Science:C] Stopped
2018-09-26T21:00:01.534Z,1537995601.534 [trackPatchFDOM:Science:Read_Oil] Stopped
2018-09-26T21:00:01.534Z,1537995601.534 [trackPatchFDOM:Science:PeakDetectFDOM] Stopped
2018-09-26T21:00:01.534Z,1537995601.534 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::uninitialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T21:00:01.534Z,1537995601.534 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T21:00:01.534Z,1537995601.534 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T21:00:01.534Z,1537995601.534 [trackPatchFDOM:K.SetSpeed] Stopped
2018-09-26T21:00:01.534Z,1537995601.534 [trackPatchFDOM:K.SetSpeed](DEBUG): Uninitialize.
2018-09-26T21:00:01.534Z,1537995601.534 [trackPatchFDOM:L.DepthEnvelope] Stopped
2018-09-26T21:00:01.534Z,1537995601.534 [trackPatchFDOM:L.DepthEnvelope](DEBUG): Uninitialize.
2018-09-26T21:00:01.534Z,1537995601.534 [trackPatchFDOM:M.YoYo] Stopped
2018-09-26T21:00:01.535Z,1537995601.535 [trackPatchFDOM:M.YoYo](DEBUG): Uninitialize YoYoComponent.
2018-09-26T21:00:01.945Z,1537995601.945 [MissionManager](IMPORTANT): Started mission Default
2018-09-26T21:00:01.945Z,1537995601.945 [Default] Running Loop=1
2018-09-26T21:00:01.945Z,1537995601.945 [Default](DEBUG): Aggregate::initialize Default
2018-09-26T21:00:01.945Z,1537995601.945 [Default:B.GoToSurface] Running Loop=1
2018-09-26T21:00:01.945Z,1537995601.945 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-26T21:00:01.946Z,1537995601.946 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-26T21:00:01.946Z,1537995601.946 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-26T21:00:01.946Z,1537995601.946 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-26T21:00:01.947Z,1537995601.947 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-26T21:00:01.947Z,1537995601.947 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-26T21:00:01.948Z,1537995601.948 [Default:A.Wait] Running Loop=1
2018-09-26T21:00:01.948Z,1537995601.948 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-26T21:00:15.127Z,1537995615.127 [Default:A.Wait](INFO): Done Waiting.
2018-09-26T21:00:15.127Z,1537995615.127 [Default:A.Wait] Stopped
2018-09-26T21:00:15.127Z,1537995615.127 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-26T21:00:15.518Z,1537995615.518 [Default:CheckIn] Running Loop=1
2018-09-26T21:00:15.518Z,1537995615.518 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-26T21:00:15.518Z,1537995615.518 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-26T21:02:01.058Z,1537995721.058 [CBIT](INFO): Clearing failed state for component NAL9602
2018-09-26T21:02:01.058Z,1537995721.058 [NAL9602] No Fault, FailCount= 5
2018-09-26T21:02:01.382Z,1537995721.382 [NAL9602](INFO): Powering up NAL9602
2018-09-26T21:02:12.187Z,1537995732.187 [NAL9602](INFO): NAL9602 initialized
2018-09-26T21:05:15.641Z,1537995915.641 [Default:CheckIn:Read_GPS](INFO): Timed out from 2018-09-26T21:00:15.5Z
2018-09-26T21:05:15.641Z,1537995915.641 [Default:CheckIn:Read_GPS] Stopped
2018-09-26T21:05:15.642Z,1537995915.642 [Default:CheckIn:Read_Iridium] Running Loop=1
2018-09-26T21:05:20.180Z,1537995920.180 [DataOverHttps](INFO): Sending 93 bytes from file Logs/20180926T190706/Courier0036.lzma
2018-09-26T21:05:20.963Z,1537995920.963 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Courier0036.lzma.bak
2018-09-26T21:05:20.963Z,1537995920.963 [DataOverHttps](INFO): SBD MOMSN=8601649
2018-09-26T21:05:30.664Z,1537995930.664 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180926T190706/Courier0039.lzma
2018-09-26T21:05:30.692Z,1537995930.692 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2018-09-26T21:05:30.692Z,1537995930.692 [RDI_Pathfinder](ERROR): Failed to parse:
:TS,  0
2018-09-26T21:05:31.394Z,1537995931.394 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Courier0039.lzma.bak
2018-09-26T21:05:31.394Z,1537995931.394 [DataOverHttps](INFO): SBD MOMSN=8601652
2018-09-26T21:05:40.608Z,1537995940.608 [DataOverHttps](INFO): Sending 421 bytes from file Logs/20180926T190706/Express0037.lzma
2018-09-26T21:05:41.358Z,1537995941.358 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Express0037.lzma.bak
2018-09-26T21:05:41.358Z,1537995941.358 [DataOverHttps](INFO): SBD MOMSN=8601654
2018-09-26T21:05:51.832Z,1537995951.832 [NAL9602](INFO): Powering down
2018-09-26T21:05:52.093Z,1537995952.093 [DataOverHttps](INFO): Sending 52 bytes from file Logs/20180926T190706/Express0040.lzma
2018-09-26T21:05:52.839Z,1537995952.839 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Express0040.lzma.bak
2018-09-26T21:05:52.839Z,1537995952.839 [DataOverHttps](INFO): SBD MOMSN=8601673
2018-09-26T21:05:53.696Z,1537995953.696 [Default:CheckIn:Read_Iridium] Stopped
2018-09-26T21:05:53.696Z,1537995953.696 [Default:CheckIn:C.Wait] Running Loop=1
2018-09-26T21:05:53.697Z,1537995953.697 [Default:CheckIn:C.Wait](DEBUG): Initialize Wait Component.
2018-09-26T21:07:00.656Z,1537996020.656 [RDI_Pathfinder](ERROR): only read 4 of 5 data items
2018-09-26T21:07:00.657Z,1537996020.657 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-3:BS,-32768,-32768,-32768,V
2018-09-26T21:10:54.121Z,1537996254.121 [Default:CheckIn:C.Wait](INFO): Done Waiting.
2018-09-26T21:10:54.121Z,1537996254.121 [Default:CheckIn:C.Wait] Stopped
2018-09-26T21:10:54.121Z,1537996254.121 [Default:CheckIn:C.Wait](DEBUG): Uninitialize Wait Component.
2018-09-26T21:10:54.122Z,1537996254.122 [Default:CheckIn:D] Running Loop=1
2018-09-26T21:10:54.499Z,1537996254.499 [Default:CheckIn:D] Stopped
2018-09-26T21:10:54.499Z,1537996254.499 [Default:CheckIn:E] Running Loop=1
2018-09-26T21:10:54.932Z,1537996254.932 [Default:CheckIn:E](IMPORTANT): Default mission has been running for 10.875891 min 
2018-09-26T21:10:54.936Z,1537996254.936 [Default:CheckIn:E] Stopped
2018-09-26T21:10:54.936Z,1537996254.936 [Default:CheckIn](INFO): Completed Default:CheckIn
2018-09-26T21:10:54.936Z,1537996254.936 [Default:CheckIn] Stopped
2018-09-26T21:10:54.936Z,1537996254.936 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-26T21:10:54.936Z,1537996254.936 [Default:CheckIn](INFO): Running loop #2
2018-09-26T21:10:54.936Z,1537996254.936 [Default:CheckIn] Running Loop=2
2018-09-26T21:10:54.937Z,1537996254.937 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-26T21:10:54.937Z,1537996254.937 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-26T21:10:55.638Z,1537996255.638 [NAL9602](INFO): Powering up
2018-09-26T21:11:06.456Z,1537996266.456 [NAL9602](INFO): NAL9602 initialized
2018-09-26T21:11:07.251Z,1537996267.251 [NAL9602](FAULT): GPS failed to acquire within timeout.
2018-09-26T21:11:07.251Z,1537996267.251 [NAL9602] Data Fault, FailCount= 1
2018-09-26T21:11:07.251Z,1537996267.251 [NAL9602](ERROR): Data Fault
2018-09-26T21:11:07.328Z,1537996267.328 [CBIT](ERROR): Data Fault in component: NAL9602
2018-09-26T21:11:07.670Z,1537996267.670 [NAL9602](INFO): Powering down
2018-09-26T21:11:08.511Z,1537996268.511 [CBIT](INFO): Clearing failed state for component NAL9602
2018-09-26T21:11:08.511Z,1537996268.511 [NAL9602] No Fault, FailCount= 1
2018-09-26T21:11:37.979Z,1537996297.979 [NAL9602](INFO): Powering up NAL9602
2018-09-26T21:11:50.394Z,1537996310.394 [NAL9602](INFO): NAL9602 initialized
2018-09-26T21:12:05.586Z,1537996325.586 [NAL9602](INFO): SBD MO Status=0, MOMSN=1736, MT Status=0, MTMSN=0
2018-09-26T21:12:05.586Z,1537996325.586 [NAL9602](INFO): No messages in MT queue
2018-09-26T21:14:11.310Z,1537996451.310 [DataOverHttps](IMPORTANT): SBD MTMSN=20180926T211411
2018-09-26T21:14:15.479Z,1537996455.479 [DataOverHttps](INFO): Received command:sched asap "load Science/trackPatchFDOM.xml;set trackPatchFDOM.MaxDepth 15 meter;set trackPatchFDOM.MinOffshore 1000 meter;set trackPatchFDOM.NeedCommsTime 30 minute;set trackPatchFDOM.MissionTimeout 3 hour" 1mzl 1 3
2018-09-26T21:14:15.566Z,1537996455.566 [CommandLine](IMPORTANT): got command schedule asap "load Science/trackPatchFDOM.xml;set trackPatchFDOM.MaxDepth 15 meter;set trackPatchFDOM.MinOffshore 1000 meter;set trackPatchFDOM.NeedCommsTime 30 minute;set trackPatchFDOM.MissionTimeout 3 hour" 1mzl 1 3.000000
2018-09-26T21:14:15.567Z,1537996455.567 [CommandLine](IMPORTANT): Scheduling command #1 of 3 with id=1mzl
2018-09-26T21:14:15.568Z,1537996455.568 [CommandLine](IMPORTANT): Scheduled #11 (#1 of 3 with id='1mzl'): "load Science/trackPatchFDOM.xml;set trackPatchFDOM.MaxDepth 15 meter;set trackPatchFDOM.MinOffshore 1000 meter;set trackPatchFDOM.NeedCommsTime 30 minute;set trackPatchFDOM.MissionTimeout 3 hour" ASAP
2018-09-26T21:14:16.234Z,1537996456.234 [DataOverHttps](IMPORTANT): SBD MTMSN=20180926T211416
2018-09-26T21:14:20.410Z,1537996460.410 [DataOverHttps](INFO): Received command:sched asap "set trackPatchFDOM.YoYoMinDepth .5 meter;set trackPatchFDOM.YoYoMaxDepth 4 meter;set trackPatchFDOM.WpMaxDistance 800 meter;set trackPatchFDOM.WpTimeout 30 minute;set trackPatchFDOM.LowPassWindowLen 7 count" 1mzl 2 3
2018-09-26T21:14:20.470Z,1537996460.470 [CommandLine](IMPORTANT): got command schedule asap "set trackPatchFDOM.YoYoMinDepth .5 meter;set trackPatchFDOM.YoYoMaxDepth 4 meter;set trackPatchFDOM.WpMaxDistance 800 meter;set trackPatchFDOM.WpTimeout 30 minute;set trackPatchFDOM.LowPassWindowLen 7 count" 1mzl 2 3.000000
2018-09-26T21:14:20.471Z,1537996460.471 [CommandLine](IMPORTANT): Scheduling command #2 of 3 with id=1mzl
2018-09-26T21:14:20.472Z,1537996460.472 [CommandLine](IMPORTANT): Scheduled #12 (#2 of 3 with id='1mzl'): "set trackPatchFDOM.YoYoMinDepth .5 meter;set trackPatchFDOM.YoYoMaxDepth 4 meter;set trackPatchFDOM.WpMaxDistance 800 meter;set trackPatchFDOM.WpTimeout 30 minute;set trackPatchFDOM.LowPassWindowLen 7 count" ASAP
2018-09-26T21:14:21.154Z,1537996461.154 [DataOverHttps](IMPORTANT): SBD MTMSN=20180926T211421
2018-09-26T21:14:25.552Z,1537996465.552 [DataOverHttps](INFO): Received command:sched asap "set trackPatchFDOM.PeakShallowBnd .5 meter;set trackPatchFDOM.PeakDeepBnd 3.7 meter;set trackPatchFDOM.FilterWidth 2 count;run " 1mzl 3 3
2018-09-26T21:14:25.575Z,1537996465.575 [CommandLine](IMPORTANT): got command schedule asap "set trackPatchFDOM.PeakShallowBnd .5 meter;set trackPatchFDOM.PeakDeepBnd 3.7 meter;set trackPatchFDOM.FilterWidth 2 count;run " 1mzl 3 3.000000
2018-09-26T21:14:25.575Z,1537996465.575 [CommandLine](IMPORTANT): Scheduling command #3 of 3 with id=1mzl
2018-09-26T21:14:25.576Z,1537996465.576 [CommandLine](IMPORTANT): Scheduled #13 (#3 of 3 with id='1mzl'): "set trackPatchFDOM.PeakShallowBnd .5 meter;set trackPatchFDOM.PeakDeepBnd 3.7 meter;set trackPatchFDOM.FilterWidth 2 count;run " ASAP
2018-09-26T21:14:25.752Z,1537996465.752 [CommandLine](IMPORTANT): got command load ./Missions/Science/trackPatchFDOM.xml
2018-09-26T21:14:25.757Z,1537996465.757 [MissionManager](INFO): Loading Mission: ./Missions/Science/trackPatchFDOM.xml
2018-09-26T21:14:26.208Z,1537996466.208 [MissionManager](INFO): DefineArg trackPatchFDOM.MinAltitude = 5.000000 m
2018-09-26T21:14:26.211Z,1537996466.211 [MissionManager](INFO): DefineArg trackPatchFDOM.MaxDepth = 65.000000 m
2018-09-26T21:14:26.214Z,1537996466.214 [MissionManager](INFO): DefineArg trackPatchFDOM.MinWaterDepth = 10.000000 m
2018-09-26T21:14:26.216Z,1537996466.216 [MissionManager](INFO): DefineArg trackPatchFDOM.MinOffshore = 2000.000000 m
2018-09-26T21:14:26.218Z,1537996466.218 [MissionManager](INFO): DefineArg trackPatchFDOM.NeedCommsTime = 180.000000 min
2018-09-26T21:14:26.221Z,1537996466.221 [MissionManager](INFO): DefineArg trackPatchFDOM.MissionTimeout = 56.000000 h
2018-09-26T21:14:26.224Z,1537996466.224 [MissionManager](INFO): DefineArg trackPatchFDOM.MassDefault = 0.200000 cm
2018-09-26T21:14:26.227Z,1537996466.227 [MissionManager](INFO): DefineArg trackPatchFDOM.BuoyancyNeutral = 274.999999 cc
2018-09-26T21:14:26.229Z,1537996466.229 [MissionManager](INFO): DefineArg trackPatchFDOM.YoYoMinDepth = 5.000000 m
2018-09-26T21:14:26.231Z,1537996466.231 [MissionManager](INFO): DefineArg trackPatchFDOM.YoYoMaxDepth = 25.000000 m
2018-09-26T21:14:26.234Z,1537996466.234 [MissionManager](INFO): DefineArg trackPatchFDOM.YoYoUpPitch = 20.000000 arcdeg
2018-09-26T21:14:26.236Z,1537996466.236 [MissionManager](INFO): DefineArg trackPatchFDOM.YoYoDownPitch = -20.000000 arcdeg
2018-09-26T21:14:26.238Z,1537996466.238 [MissionManager](INFO): DefineArg trackPatchFDOM.Speed = 1.000000 m/s
2018-09-26T21:14:26.241Z,1537996466.241 [MissionManager](INFO): DefineArg trackPatchFDOM.WpMaxDistance = 1000.000000 m
2018-09-26T21:14:26.243Z,1537996466.243 [MissionManager](INFO): DefineArg trackPatchFDOM.WpTimeout = 8000.000000 s
2018-09-26T21:14:26.245Z,1537996466.245 [MissionManager](INFO): DefineArg trackPatchFDOM.WaterFrame = 1 bool
2018-09-26T21:14:26.248Z,1537996466.248 [MissionManager](INFO): DefineArg trackPatchFDOM.Repeat = 20.000000 count
2018-09-26T21:14:26.274Z,1537996466.274 [MissionManager](INFO): DefineArg trackPatchFDOM.Turn = 144.000000 arcdeg
2018-09-26T21:14:26.276Z,1537996466.276 [MissionManager](INFO): DefineArg trackPatchFDOM.Reverse = 180.000000 arcdeg
2018-09-26T21:14:26.287Z,1537996466.287 [MissionManager](INFO): DefineArg trackPatchFDOM.TwoPi = 360.000000 arcdeg
2018-09-26T21:14:26.293Z,1537996466.293 [MissionManager](INFO): DefineArg trackPatchFDOM.TimeWindowPeakRpt = nan min
2018-09-26T21:14:26.295Z,1537996466.295 [MissionManager](INFO): DefineArg trackPatchFDOM.LowPassWindowLen = 20.000000 count
2018-09-26T21:14:26.344Z,1537996466.344 [MissionManager](INFO): DefineArg trackPatchFDOM.PeakShallowBnd = 2.000000 m
2018-09-26T21:14:26.365Z,1537996466.365 [MissionManager](INFO): DefineArg trackPatchFDOM.PeakDeepBnd = 4.000000 m
2018-09-26T21:14:26.367Z,1537996466.367 [MissionManager](INFO): DefineArg trackPatchFDOM.FilterWidth = 4.000000 count
2018-09-26T21:14:26.389Z,1537996466.389 [MissionManager](INFO): DefineArg trackPatchFDOM.BeginThreshold = nan ug/l
2018-09-26T21:14:26.391Z,1537996466.391 [MissionManager](INFO): DefineArg trackPatchFDOM.OffPeakFraction = 80.000000 %
2018-09-26T21:14:26.395Z,1537996466.395 [MissionManager](INFO): DefineArg trackPatchFDOM.PatchMode = 0 bool
2018-09-26T21:14:26.397Z,1537996466.397 [MissionManager](INFO): DefineArg trackPatchFDOM.PatchTrackingHorizontal = 1 bool
2018-09-26T21:14:26.400Z,1537996466.400 [MissionManager](INFO): DefineArg trackPatchFDOM.WpBearing = -90.000000 arcdeg
2018-09-26T21:14:26.422Z,1537996466.422 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchDetectOn = 0 bool
2018-09-26T21:14:26.425Z,1537996466.425 [MissionManager](INFO): DefineOutput trackPatchFDOM.WpDone = 0 bool
2018-09-26T21:14:26.427Z,1537996466.427 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchFDOM = nan ug/l
2018-09-26T21:14:26.454Z,1537996466.454 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchFDOMDepth = nan m
2018-09-26T21:14:26.456Z,1537996466.456 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchFDOMLatitude = nan arcdeg
2018-09-26T21:14:26.475Z,1537996466.475 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchFDOMLongitude = nan arcdeg
2018-09-26T21:14:26.490Z,1537996466.490 [MissionManager](INFO): DefineOutput trackPatchFDOM.PatchFDOMDistance = 0.000000 m
2018-09-26T21:14:26.491Z,1537996466.491 [trackPatchFDOM:A.AltitudeEnvelope](DEBUG): Construct AltitudeEnvelope.
2018-09-26T21:14:26.501Z,1537996466.501 [trackPatchFDOM:B.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-26T21:14:26.534Z,1537996466.534 [MissionManager](INFO): Inserting Stack: Missions/Insert/Surface.xml
2018-09-26T21:14:26.583Z,1537996466.583 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceCommsSplit.SurfaceDepthRate = nan m/s
2018-09-26T21:14:26.585Z,1537996466.585 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceCommsSplit.SurfacePitch = 20.000000 arcdeg
2018-09-26T21:14:26.587Z,1537996466.587 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceCommsSplit.SurfaceSpeed = 1.000000 m/s
2018-09-26T21:14:26.590Z,1537996466.590 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceCommsSplit.IridiumTimeout = 30.000000 min
2018-09-26T21:14:26.591Z,1537996466.591 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceCommsSplit.UnpackSplitAtSurface = 0 bool
2018-09-26T21:14:26.592Z,1537996466.592 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-26T21:14:26.632Z,1537996466.632 [MissionManager](INFO): RedefineArg trackPatchFDOM:SurfaceCommsSplit.SurfacePitch = value:20.000000 arcdeg
2018-09-26T21:14:26.635Z,1537996466.635 [MissionManager](INFO): RedefineArg trackPatchFDOM:SurfaceCommsSplit.SurfaceSpeed = value:1.000000 m/s
2018-09-26T21:14:26.653Z,1537996466.653 [MissionManager](INFO): RedefineArg trackPatchFDOM:SurfaceCommsSplit.UnpackSplitAtSurface = value:1 bool
2018-09-26T21:14:26.655Z,1537996466.655 [MissionManager](INFO): Inserting Stack: Missions/Insert/Surface.xml
2018-09-26T21:14:26.752Z,1537996466.752 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.SurfaceDepthRate = nan m/s
2018-09-26T21:14:26.763Z,1537996466.763 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.SurfacePitch = 20.000000 arcdeg
2018-09-26T21:14:26.773Z,1537996466.773 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.SurfaceSpeed = 1.000000 m/s
2018-09-26T21:14:26.775Z,1537996466.775 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.IridiumTimeout = 30.000000 min
2018-09-26T21:14:26.778Z,1537996466.778 [MissionManager](INFO): DefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.UnpackSplitAtSurface = 0 bool
2018-09-26T21:14:26.779Z,1537996466.779 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Construct GoToSurface.
2018-09-26T21:14:26.819Z,1537996466.819 [MissionManager](INFO): RedefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.SurfacePitch = value:20.000000 arcdeg
2018-09-26T21:14:26.826Z,1537996466.826 [MissionManager](INFO): RedefineArg trackPatchFDOM:SurfaceComms:SurfaceComms.SurfaceSpeed = value:1.000000 m/s
2018-09-26T21:14:26.844Z,1537996466.844 [trackPatchFDOM:F.OffshoreEnvelope](DEBUG): Construct OffshoreEnvelope.
2018-09-26T21:14:26.869Z,1537996466.869 [trackPatchFDOM:G.WaterDepthEnvelope](DEBUG): Construct WaterDepthEnvelope.
2018-09-26T21:14:26.877Z,1537996466.877 [trackPatchFDOM:H.Pitch](DEBUG): Construct.
2018-09-26T21:14:26.886Z,1537996466.886 [trackPatchFDOM:I.Buoyancy](DEBUG): Construct Buoyancy.
2018-09-26T21:14:26.890Z,1537996466.890 [MissionManager](INFO): Inserting Stack: Missions/Insert/Science.xml
2018-09-26T21:14:27.274Z,1537996467.274 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.SampleISUS = 0 bool
2018-09-26T21:14:27.281Z,1537996467.281 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.SampleISUSmaxPitch = 60.000000 arcdeg
2018-09-26T21:14:27.283Z,1537996467.283 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.SampleISUSminPitch = -60.000000 arcdeg
2018-09-26T21:14:27.289Z,1537996467.289 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakDetectChlActive = 0 bool
2018-09-26T21:14:27.292Z,1537996467.292 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.TimeWindowPeakReport = nan min
2018-09-26T21:14:27.294Z,1537996467.294 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.HighestChlPeakReportActive = 0 bool
2018-09-26T21:14:27.296Z,1537996467.296 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PatchTracking = 0 bool
2018-09-26T21:14:27.306Z,1537996467.306 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.FilterWidthHorizontal = 3.000000 count
2018-09-26T21:14:27.322Z,1537996467.322 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.NumProfilesSlidingwindow = 100.000000 count
2018-09-26T21:14:27.324Z,1537996467.324 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.OffPeakFractionHorizontal = 80.000000 %
2018-09-26T21:14:27.330Z,1537996467.330 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakDetectNO3Active = 0 bool
2018-09-26T21:14:27.332Z,1537996467.332 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakDetectOilActive = 0 bool
2018-09-26T21:14:27.338Z,1537996467.338 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakDetectFDOMActive = 0 bool
2018-09-26T21:14:27.340Z,1537996467.340 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.UpwardDerivativeOfTemperatureActive = 0 bool
2018-09-26T21:14:27.343Z,1537996467.343 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledAanderaaO2 = 1.000000 bool
2018-09-26T21:14:27.354Z,1537996467.354 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledNeilBrown = 1.000000 bool
2018-09-26T21:14:27.356Z,1537996467.356 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledSeabird = 0.000000 bool
2018-09-26T21:14:27.363Z,1537996467.363 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledTurbulence_NPS = 0.000000 bool
2018-09-26T21:14:27.370Z,1537996467.370 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledWetLabsBB2FL = 0.000000 bool
2018-09-26T21:14:27.372Z,1537996467.372 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledWetLabsSeaOWL_UV_A = 1.000000 bool
2018-09-26T21:14:27.379Z,1537996467.379 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.EnabledISUS = 0.000000 bool
2018-09-26T21:14:27.385Z,1537996467.385 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.LowPassWindowLength = 20.000000 count
2018-09-26T21:14:27.388Z,1537996467.388 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakChlShallowBound = nan m
2018-09-26T21:14:27.394Z,1537996467.394 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakChlDeepBound = nan m
2018-09-26T21:14:27.396Z,1537996467.396 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakShallowBound = nan m
2018-09-26T21:14:27.403Z,1537996467.403 [MissionManager](INFO): DefineArg trackPatchFDOM:Science.PeakDeepBound = nan m
2018-09-26T21:14:27.409Z,1537996467.409 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakChl = 0.000000 ug/l
2018-09-26T21:14:27.411Z,1537996467.411 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakChlDepth = 0.000000 m
2018-09-26T21:14:27.418Z,1537996467.418 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakChlTemperature = 0.000000 degC
2018-09-26T21:14:27.420Z,1537996467.420 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakChlLatitude = nan arcdeg
2018-09-26T21:14:27.427Z,1537996467.427 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakChlLongitude = nan arcdeg
2018-09-26T21:14:27.434Z,1537996467.434 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakNO3 = 0.000000 umol/l
2018-09-26T21:14:27.441Z,1537996467.441 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakNO3Depth = 0.000000 m
2018-09-26T21:14:27.443Z,1537996467.443 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakNO3Latitude = nan arcdeg
2018-09-26T21:14:27.450Z,1537996467.450 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakNO3Longitude = nan arcdeg
2018-09-26T21:14:27.452Z,1537996467.452 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchChl = 0.000000 m
2018-09-26T21:14:27.459Z,1537996467.459 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchChlDepth = 0.000000 m
2018-09-26T21:14:27.465Z,1537996467.465 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchChlLatitude = nan arcdeg
2018-09-26T21:14:27.468Z,1537996467.468 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchChlLongitude = nan arcdeg
2018-09-26T21:14:27.475Z,1537996467.475 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchChlDistance = nan m
2018-09-26T21:14:27.477Z,1537996467.477 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakOil = 0.000000 kg/m3
2018-09-26T21:14:27.480Z,1537996467.480 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakOilDepth = 0.000000 m
2018-09-26T21:14:27.492Z,1537996467.492 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakOilLatitude = nan arcdeg
2018-09-26T21:14:27.495Z,1537996467.495 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakOilLongitude = nan arcdeg
2018-09-26T21:14:27.530Z,1537996467.530 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakFDOM = 0.000000 ppb
2018-09-26T21:14:27.532Z,1537996467.532 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakFDOMDepth = 0.000000 m
2018-09-26T21:14:27.575Z,1537996467.575 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakFDOMLatitude = nan arcdeg
2018-09-26T21:14:27.578Z,1537996467.578 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PeakFDOMLongitude = nan arcdeg
2018-09-26T21:14:27.580Z,1537996467.580 [MissionManager](INFO): DefineOutput trackPatchFDOM:Science.PatchFDOMDistance = nan m
2018-09-26T21:14:27.611Z,1537996467.611 [Reporter](INFO): trackPatchFDOM:Science.PeakFDOM 0.000000 ppb
2018-09-26T21:14:27.663Z,1537996467.663 [trackPatchFDOM:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-26T21:14:27.692Z,1537996467.692 [trackPatchFDOM:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-26T21:14:27.738Z,1537996467.738 [trackPatchFDOM:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-26T21:14:27.764Z,1537996467.764 [trackPatchFDOM:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-26T21:14:27.781Z,1537996467.781 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Construct PeakDetectVsDepth.
2018-09-26T21:14:27.804Z,1537996467.804 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.PeakDetectFDOMActive = value:1 bool
2018-09-26T21:14:27.806Z,1537996467.806 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.TimeWindowPeakReport = reader:trackPatchFDOM.TimeWindowPeakRpt
2018-09-26T21:14:27.807Z,1537996467.807 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.PatchTracking = value:1 bool
2018-09-26T21:14:27.829Z,1537996467.829 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.LowPassWindowLength = reader:trackPatchFDOM.LowPassWindowLen
2018-09-26T21:14:27.831Z,1537996467.831 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.PeakShallowBound = reader:trackPatchFDOM.PeakShallowBnd
2018-09-26T21:14:27.832Z,1537996467.832 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.PeakDeepBound = reader:trackPatchFDOM.PeakDeepBnd
2018-09-26T21:14:27.834Z,1537996467.834 [MissionManager](INFO): RedefineArg trackPatchFDOM:Science.OffPeakFractionHorizontal = reader:trackPatchFDOM.OffPeakFraction
2018-09-26T21:14:27.835Z,1537996467.835 [trackPatchFDOM:K.SetSpeed](DEBUG): Construct.
2018-09-26T21:14:27.850Z,1537996467.850 [trackPatchFDOM:L.DepthEnvelope](DEBUG): Construct DepthEnvelope.
2018-09-26T21:14:27.857Z,1537996467.857 [trackPatchFDOM:M.YoYo](DEBUG): Construct YoYo.
2018-09-26T21:14:27.865Z,1537996467.865 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](DEBUG): Construct PeakDetectHorizontal.
2018-09-26T21:14:27.968Z,1537996467.968 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-26T21:14:27.990Z,1537996467.990 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-26T21:14:28.052Z,1537996468.052 [trackPatchFDOM:PatchDetectHorizontal:InLegWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-26T21:14:28.098Z,1537996468.098 [trackPatchFDOM:PatchDetectHorizontal:OutLeg:OutLegWp.Waypoint](DEBUG): Construct Waypoint.
2018-09-26T21:14:28.206Z,1537996468.206 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Trigger="Tethys/Trigger" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Trigger http://okeanids.mbari.org/tethys/Xml/Trigger.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="trackPatchFDOM">

    <Description>
        Vehicle runs yo-yos, with patch detect enabled for FDOM
        concentration_of_colored_dissolved_organic_matter_in_sea_water_expressed_as_equivalent_mass_fraction_of_quinine_sulfate_dihydrate
        concentration.
    </Description>

<!-- Vehicle safety parameters -->

    <DefineArg Name="MinAltitude"><Description>
        Minimum altitude for the entire mission.
    </Description><Units:meter/><Value>5</Value></DefineArg>

    <DefineArg Name="MaxDepth"><Description>
        Maximum depth for the entire mission.
    </Description><Units:meter/><Value>65</Value></DefineArg>

    <DefineArg Name="MinWaterDepth"><Description>
        Minimum water depth for the entire mission.
    </Description><Units:meter/><Value>10</Value></DefineArg>

    <DefineArg Name="MinOffshore"><Description>
        Minimum offshore distance for the entire mission.
    </Description><Units:meter/><Value>2000</Value></DefineArg>

    <DefineArg Name="NeedCommsTime"><Description>
        Maximum time between surfacings for communications
    </Description><Units:minute/><Value>180</Value></DefineArg>

    <DefineArg Name="MissionTimeout"><Description>
        Timeout for the entire mission
    </Description><Units:hour/><Value>56</Value></DefineArg>

    <DefineArg Name="MassDefault"><Description>
        Static setting for mass during the mission. Defaults to massDefault
        setting in the Config/Control.cfg file.
    </Description><Control:VerticalControl.massDefault/></DefineArg>

    <DefineArg Name="BuoyancyNeutral"><Description>
        Buoyancy bladder position while performing the YoYo behavior. Defaults
        to buoyancyNeutral setting in the Config/Control.cfg file.
    </Description><Control:VerticalControl.buoyancyNeutral/></DefineArg>

<!-- Basic guidance settings -->

    <DefineArg Name="YoYoMinDepth"><Description>
        Minimum depth during yo-yo's.
    </Description><Units:meter/><Value>5.0</Value></DefineArg>

    <DefineArg Name="YoYoMaxDepth"><Description>
        Maximum depth during yo-yo's.
    </Description><Units:meter/><Value>25.0</Value></DefineArg>

    <DefineArg Name="YoYoUpPitch"><Description>
        Pitch when yo-yo's are ascending.
    </Description><Units:degree/><Value>20.0</Value></DefineArg>

    <DefineArg Name="YoYoDownPitch"><Description>
        Pitch when yo-yo's are descending.
    </Description><Units:degree/><Value>-20.0</Value></DefineArg>

    <DefineArg Name="Speed"><Description>
        Vehicle speed.
    </Description><Units:meter_per_second/><Value>1</Value></DefineArg>

    <DefineArg Name="WpMaxDistance"><Description>
        Maximum length of each tracking leg
<!--debug
    </Description><Units:meter/><Value>7500</Value></DefineArg>
-->
    </Description><Units:meter/><Value>1000</Value></DefineArg>

    <DefineArg Name="WpTimeout"><Description>
        Maximum duration of each tracking leg
    </Description><Units:second/><Value>8000</Value></DefineArg>

    <DefineArg Name="WaterFrame"><Description>
        Set WaterFrame true to drive towards waypoints in the water frame of
        reference
    </Description><True/></DefineArg>

    <DefineArg Name="Repeat"><Description>
        Maximum number of tracking legs
    </Description><Units:count/><Value>20</Value></DefineArg>

<!-- Constant settings for each tracking leg -->

    <DefineArg Name="Turn"><Description>
        Amount to turn at each leg
    </Description><Units:degree/><Value>144</Value></DefineArg>

    <DefineArg Name="Reverse"><Description>
        Change in bearing which reverses vehicle direction
    </Description><Units:degree/><Value>180</Value></DefineArg>

    <DefineArg Name="TwoPi"><Description>
        Applied to stop run-up of angles
    </Description><Units:degree/><Value>360</Value></DefineArg>

    <DefineArg Name="TimeWindowPeakRpt"><Description>
        If greater than zero, report a peak every window. If NaN or zero, this
        variable is ignored.
    </Description><Units:minute/><Value>NaN</Value></DefineArg>

<!--debug
    </Description><Units:minute/><Value>1</Value></DefineArg>
-->

    <DefineArg Name="LowPassWindowLen"><Description>
        Low-pass window length (based on depth sensor sampling interval 0.4
        second) for low-pass filtering.
    </Description><Units:count/><Value>20</Value></DefineArg>

    <DefineArg Name="PeakShallowBnd"><Description>
        Shallow depth bound for detecting peak on each descent or ascent
        profile.
    </Description><Units:meter/><Value>2</Value></DefineArg>

    <DefineArg Name="PeakDeepBnd"><Description>
        Deep depth bound for detecting peak on each descent or ascent profile.
    </Description><Units:meter/><Value>4</Value></DefineArg>

    <DefineArg Name="FilterWidth"><Description>
        Width of boxcar filter used in horizontal patch detection
    </Description><Units:count/><Value>4</Value></DefineArg>

    <DefineArg Name="BeginThreshold"><Description>
        If non-NaN, sets threshold for starting horizontal patch detection
    </Description><Units:microgram_per_liter/><Value>NaN</Value></DefineArg>

    <DefineArg Name="OffPeakFraction"><Description>
        When filtered horizontal value is this fraction of the peak, consider it
        outside the patch.
    </Description><Units:percent/><Value>80</Value></DefineArg>

    <DefineArg Name="PatchMode"><Description>
        If true, use center of "in peak" range as the turn-around point. If
        false use maximum horizontal peak location as the turn-around point.
    </Description><False/></DefineArg>

    <DefineArg Name="PatchTrackingHorizontal"><Description>
        Set true to turn on horizontal patch tracking
    </Description><True/></DefineArg>

<!-- Variable Settings for each tracking leg -->

    <DefineArg Name="WpBearing"><Description>
        Bearing being followed in the current leg. Set this to initialize start
        direction of patch tracking.
    </Description><Units:degree/><Value>-90</Value></DefineArg>

    <DefineOutput Name="PatchDetectOn"><Description>
        Mission sets this to true when the patch has been crossed.
    </Description><False/></DefineOutput>

    <DefineOutput Name="WpDone"><Description>
        Mission sets this to true when the cross-patch waypoint has been
        reached.
    </Description><False/></DefineOutput>

    <DefineOutput Name="PatchFDOM"><Units:microgram_per_liter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchFDOMDepth"><Units:meter/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchFDOMLatitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchFDOMLongitude"><Units:degree/><Value>NaN</Value></DefineOutput>

    <DefineOutput Name="PatchFDOMDistance"><Units:meter/><Value>0</Value></DefineOutput>

<!-- The timeout -->

    <Timeout Duration="MissionTimeout"/>

<!-- And now the mission -->

    <Guidance:AltitudeEnvelope>
        <Parallel/>
        <Setting><Guidance:AltitudeEnvelope.minAltitude/><Arg Name="MinAltitude"/></Setting>
    </Guidance:AltitudeEnvelope>

    <Guidance:DepthEnvelope>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="MaxDepth"/></Setting>
    </Guidance:DepthEnvelope>

    <Insert Filename="Insert/Surface.xml" Id="SurfaceCommsSplit">
        <RedefineArg Name="SurfacePitch"><Units:degree/><Value>20</Value></RedefineArg>
        <RedefineArg Name="SurfaceSpeed"><Units:meter_per_second/><Value>1</Value></RedefineArg>
        <RedefineArg Name="UnpackSplitAtSurface"><True/></RedefineArg>
    </Insert>

    <Aggregate Id="SurfaceComms">

        <When>
            <Called/>
        </When>

        <Insert Filename="Insert/Surface.xml">
            <RedefineArg Name="SurfacePitch"><Units:degree/><Value>20</Value></RedefineArg>
            <RedefineArg Name="SurfaceSpeed"><Units:meter_per_second/><Value>1</Value></RedefineArg>
        </Insert>

    </Aggregate>

<!-- GPS Update.  Don't go too long w/o a GPS fix. -->

    <Aggregate Id="NeedComms">

        <When>
            <Universal:platform_pitch_angle/>
            <Gt><Units:degree/><Value>0</Value></Gt>
            <And><Elapsed><Universal:time_fix/></Elapsed><Gt><Arg Name="NeedCommsTime"/></Gt></And>
            <Or><Elapsed><Universal:time_fix/></Elapsed><Gt><Arg Name="NeedCommsTime"/><Add><Units:minute/><Value>10</Value></Add></Gt></Or>
        </When>

        <Syslog Severity="Important">NeedComms Timeout Surfacing</Syslog>

        <Call RefId="SurfaceComms"/>

    </Aggregate>

    <Guidance:OffshoreEnvelope>
        <Parallel/>
        <Setting><Guidance:OffshoreEnvelope.minOffshore/><Arg Name="MinOffshore"/></Setting>
    </Guidance:OffshoreEnvelope>

    <Guidance:WaterDepthEnvelope>
        <Parallel/>
        <Setting><Guidance:WaterDepthEnvelope.minWaterDepth/><Arg Name="MinWaterDepth"/></Setting>
    </Guidance:WaterDepthEnvelope>

    <Guidance:Pitch>
        <Parallel/>
        <Setting><Guidance:Pitch.massPosition/><Arg Name="MassDefault"/></Setting>
    </Guidance:Pitch>

    <Guidance:Buoyancy>
        <Parallel/>
        <Setting><Guidance:Buoyancy.position /><Arg Name="BuoyancyNeutral"/></Setting>
    </Guidance:Buoyancy>

<!-- If we're executing here or below, lets' get science data! -->

    <Insert Filename="Insert/Science.xml">
        <RedefineArg Name="PeakDetectFDOMActive"><True/></RedefineArg>
        <RedefineArg Name="TimeWindowPeakReport"><Arg Name="TimeWindowPeakRpt"/></RedefineArg>
        <RedefineArg Name="PatchTracking"><True/></RedefineArg>
        <RedefineArg Name="LowPassWindowLength"><Arg Name="LowPassWindowLen"/></RedefineArg>
        <RedefineArg Name="PeakShallowBound"><Arg Name="PeakShallowBnd"/></RedefineArg>
        <RedefineArg Name="PeakDeepBound"><Arg Name="PeakDeepBnd"/></RedefineArg>
        <RedefineArg Name="OffPeakFractionHorizontal"><Arg Name="OffPeakFraction"/></RedefineArg>
    </Insert>

    <Guidance:SetSpeed>
        <Parallel/>
        <Setting><Guidance:SetSpeed.speed/><Arg Name="Speed"/></Setting>
    </Guidance:SetSpeed>

    <Guidance:DepthEnvelope>
        <Parallel/>
        <Setting><Guidance:DepthEnvelope.minDepth/><Arg Name="YoYoMinDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.maxDepth/><Arg Name="YoYoMaxDepth"/></Setting>
        <Setting><Guidance:DepthEnvelope.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:DepthEnvelope.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:DepthEnvelope>

    <Guidance:YoYo>
        <Parallel/>
        <Setting><Guidance:YoYo.downPitch/><Arg Name="YoYoDownPitch"/></Setting>
        <Setting><Guidance:YoYo.upPitch/><Arg Name="YoYoUpPitch"/></Setting>
    </Guidance:YoYo>

    <Aggregate Id="PatchDetectHorizontal">

        <Sequence Repeat="Repeat"/>

        <Aggregate Id="PatchDetection">

            <When>
                <Arg Name="PatchDetectOn"/>
            </When>

            <Trigger:PeakDetectHorizontal Id="PeakDetectHorizontalTrigger">
                <Sequence/>
                <Break><Arg Name="WpDone"/>
                </Break>
                <Setting><Trigger:PeakDetectHorizontal.patchTracking/><Arg Name="PatchTrackingHorizontal"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.detectFrom/><Arg Name="Science:PeakFDOM"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.depthFrom/><Arg Name="Science:PeakFDOMDepth"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.latitudeFrom/><Arg Name="Science:PeakFDOMLatitude"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.longitudeFrom/><Arg Name="Science:PeakFDOMLongitude"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.beginThreshold/><Arg Name="BeginThreshold"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.offPeakFraction/><Arg Name="OffPeakFraction"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.filterWidth/><Arg Name="FilterWidth"/></Setting>
                <Setting><Trigger:PeakDetectHorizontal.centerPeak/><Arg Name="PatchMode"/></Setting>
                <OutputArg Name="PatchFDOM"><Trigger:PeakDetectHorizontal.peakDetect/></OutputArg>
                <OutputArg Name="PatchFDOMDepth"><Trigger:PeakDetectHorizontal.peakDepth/></OutputArg>
                <OutputArg Name="PatchFDOMLatitude"><Trigger:PeakDetectHorizontal.peakLatitude/></OutputArg>
                <OutputArg Name="PatchFDOMLongitude"><Trigger:PeakDetectHorizontal.peakLongitude/></OutputArg>
                <OutputArg Name="PatchFDOMDistance"><Trigger:PeakDetectHorizontal.peakDistance/></OutputArg>
            </Trigger:PeakDetectHorizontal>

            <Syslog Severity="Important">Fell below OffPeakFraction. Patch value is <Arg Name="PatchFDOM"/><Units:part_per_billion/> at lat = <Arg Name="PatchFDOMLatitude"/><Units:degree/>, lon = <Arg Name="PatchFDOMLongitude"/><Units:degree/>, dep = <Arg Name="PatchFDOMDepth"/><Units:meter/>, distance = <Arg Name="PatchFDOMDistance"/><Units:meter/></Syslog>

            <SendData Service="Express"><Arg Name="PatchFDOM"/><Arg Name="PatchFDOMDepth"/><Arg Name="PatchFDOMLatitude"/><Arg Name="PatchFDOMLongitude"/>
            </SendData>

            <Assign Id="AssignPatchDetectOff"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

        </Aggregate>

        <Assign Id="AssignPatchDetectOn"><Sequence/><Arg Name="PatchDetectOn"/><True/></Assign>

        <Syslog Severity="Important">Next: bearing for CrossLeg: <Arg Name="WpBearing"/><Units:degree/>. WpMaxDistance = <Arg Name="WpMaxDistance"/><Units:meter/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>.</Syslog>

        <Aggregate Id="CrossLeg">

            <Description>
                This is a long leg across the width of the patch. Also the first
                leg in a mission run. Two waypoints run in parallel: a short run
                to the surfacing point, and a longer run to the edge of the
                patch.
            </Description>

            <Sequence/>

            <Break><Arg Name="WpDone"/>
                <Or><Arg Name="PatchDetectOn"/><Eq><False/></Eq></Or>
            </Break>

            <Guidance:Waypoint Id="CrossSurfaceWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="PatchFDOMDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Call RefId="SurfaceComms"/>

            <Guidance:Waypoint Id="CrossPeakWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="WpMaxDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Syslog Severity="Important">CrossPeakWp done. Lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchFDOM"/><Units:part_per_billion/> at lat = <Arg Name="PatchFDOMLatitude"/><Units:degree/>, lon = <Arg Name="PatchFDOMLongitude"/><Units:degree/>, dep = <Arg Name="PatchFDOMDepth"/><Units:meter/>, distance = <Arg Name="PatchFDOMDistance"/><Units:meter/></Syslog>

            <Assign Id="AssignPatchDetectOffInCrossLeg"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

            <Assign Id="AssignWpDoneInCrossLeg"><Sequence/><Arg Name="WpDone"/><True/></Assign>

        </Aggregate>

        <Assign Id="AssignWpBearingForInLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Add><Arg Name="Reverse"/></Add><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

        <Syslog Severity="Important">Next: bearing for InLeg: <Arg Name="WpBearing"/><Units:degree/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchFDOM"/><Units:part_per_billion/> at lat = <Arg Name="PatchFDOMLatitude"/><Units:degree/>, lon = <Arg Name="PatchFDOMLongitude"/><Units:degree/>, dep = <Arg Name="PatchFDOMDepth"/><Units:meter/>, distance = <Arg Name="PatchFDOMDistance"/><Units:meter/></Syslog>

        <Guidance:Waypoint Id="InLegWp">
            <Description>
                Simply drive back towards the patch center
            </Description>
            <Sequence/>
            <Timeout Duration="WpTimeout"/>
            <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="PatchFDOMDistance"/></Setting>
            <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
            <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
        </Guidance:Waypoint>

        <Assign Id="AssignWpBearingForOutLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Sub><Arg Name="Turn"/></Sub><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

        <Syslog Severity="Important">Next: bearing for OutLeg: <Arg Name="WpBearing"/><Units:degree/>. WpMaxDistance = <Arg Name="WpMaxDistance"/><Units:meter/>. Current lat, lon = <Universal:latitude/><Units:degree/>, <Universal:longitude/><Units:degree/>. Patch value is <Arg Name="PatchFDOM"/><Units:part_per_billion/> at lat = <Arg Name="PatchFDOMLatitude"/><Units:degree/>, lon = <Arg Name="PatchFDOMLongitude"/><Units:degree/>, dep = <Arg Name="PatchFDOMDepth"/><Units:meter/>, distance = <Arg Name="PatchFDOMDistance"/><Units:meter/></Syslog>

        <Call RefId="SurfaceCommsSplit"/>

        <Assign Id="AssignPatchDetectOnForOutLeg"><Sequence/><Arg Name="PatchDetectOn"/><True/></Assign>

        <Aggregate Id="OutLeg">

            <Description>
                Drive outward until edge of patch is detected.
            </Description>

            <Sequence/>

            <Break><Arg Name="WpDone"/>
                <Or><Arg Name="PatchDetectOn"/><Eq><False/></Eq></Or>
            </Break>

            <Guidance:Waypoint Id="OutLegWp">
                <Sequence/>
                <Timeout Duration="WpTimeout"/>
                <Setting><Guidance:Waypoint.distanceDelta/><Arg Name="WpMaxDistance"/></Setting>
                <Setting><Guidance:Waypoint.distanceDeltaBearing/><Arg Name="WpBearing"/></Setting>
                <Setting><Guidance:Waypoint.waterFrame/><Arg Name="WaterFrame"/></Setting>
            </Guidance:Waypoint>

            <Assign Id="AssignPatchDetectOffInOutLeg"><Sequence/><Arg Name="PatchDetectOn"/><False/></Assign>

            <Assign Id="AssignWpDoneInOutLeg"><Sequence/><Arg Name="WpDone"/><True/></Assign>

        </Aggregate>

        <Assign Id="AssignWpBearingForCrossLeg"><Sequence/><Arg Name="WpBearing"/><Arg Name="WpBearing"/><Add><Arg Name="Reverse"/></Add><Mod><Arg Name="TwoPi"/>
        </Mod></Assign>

    </Aggregate>

</Mission>


2018-09-26T21:14:28.207Z,1537996468.207 [CommandLine](IMPORTANT): Loaded ./Missions/Science/trackPatchFDOM.xml
2018-09-26T21:14:40.505Z,1537996480.505 [CommandLine](IMPORTANT): got command set trackPatchFDOM.MaxDepth 15.000000 meter
2018-09-26T21:14:40.506Z,1537996480.506 [CommandLine](IMPORTANT): got command set trackPatchFDOM.MinOffshore 1000.000000 meter
2018-09-26T21:14:40.507Z,1537996480.507 [CommandLine](IMPORTANT): got command set trackPatchFDOM.NeedCommsTime 30.000000 minute
2018-09-26T21:14:40.508Z,1537996480.508 [CommandLine](IMPORTANT): got command set trackPatchFDOM.MissionTimeout 3.000000 hour
2018-09-26T21:14:56.241Z,1537996496.241 [CommandLine](IMPORTANT): got command set trackPatchFDOM.YoYoMinDepth 0.500000 meter
2018-09-26T21:14:56.242Z,1537996496.242 [CommandLine](IMPORTANT): got command set trackPatchFDOM.YoYoMaxDepth 4.000000 meter
2018-09-26T21:14:56.243Z,1537996496.243 [CommandLine](IMPORTANT): got command set trackPatchFDOM.WpMaxDistance 800.000000 meter
2018-09-26T21:14:56.244Z,1537996496.244 [CommandLine](IMPORTANT): got command set trackPatchFDOM.WpTimeout 30.000000 minute
2018-09-26T21:14:56.244Z,1537996496.244 [CommandLine](IMPORTANT): got command set trackPatchFDOM.LowPassWindowLen 7.000000 count
2018-09-26T21:15:05.180Z,1537996505.180 [BPC1](INFO): Calculating totals. Valid battery stick count: 56. Valid reserve battery stick count: 6.
2018-09-26T21:15:06.976Z,1537996506.976 [CommandLine](IMPORTANT): got command set trackPatchFDOM.PeakShallowBnd 0.500000 meter
2018-09-26T21:15:06.977Z,1537996506.977 [CommandLine](IMPORTANT): got command set trackPatchFDOM.PeakDeepBnd 3.700000 meter
2018-09-26T21:15:06.977Z,1537996506.977 [CommandLine](IMPORTANT): got command set trackPatchFDOM.FilterWidth 2.000000 count
2018-09-26T21:15:06.978Z,1537996506.978 [CommandLine](IMPORTANT): got command run 
2018-09-26T21:15:06.980Z,1537996506.980 [CommandLine](IMPORTANT): Running 
2018-09-26T21:15:07.164Z,1537996507.164 [Default] Stopped
2018-09-26T21:15:07.164Z,1537996507.164 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-26T21:15:07.164Z,1537996507.164 [Default:B.GoToSurface] Stopped
2018-09-26T21:15:07.164Z,1537996507.164 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-26T21:15:07.164Z,1537996507.164 [Default:CheckIn] Stopped
2018-09-26T21:15:07.169Z,1537996507.169 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-26T21:15:07.169Z,1537996507.169 [Default:CheckIn:Read_GPS] Stopped
2018-09-26T21:15:07.169Z,1537996507.169 [MissionManager](IMPORTANT): Started mission trackPatchFDOM
2018-09-26T21:15:07.169Z,1537996507.169 [trackPatchFDOM] Running Loop=1
2018-09-26T21:15:07.169Z,1537996507.169 [trackPatchFDOM](DEBUG): Aggregate::initialize trackPatchFDOM
2018-09-26T21:15:07.170Z,1537996507.170 [trackPatchFDOM:A.AltitudeEnvelope] Running Loop=1
2018-09-26T21:15:07.170Z,1537996507.170 [trackPatchFDOM:A.AltitudeEnvelope](DEBUG): Initialize AltitudeEnvelopeComponent.
2018-09-26T21:15:07.170Z,1537996507.170 [trackPatchFDOM:B.DepthEnvelope] Running Loop=1
2018-09-26T21:15:07.170Z,1537996507.170 [trackPatchFDOM:B.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-26T21:15:07.170Z,1537996507.170 [trackPatchFDOM:F.OffshoreEnvelope] Running Loop=1
2018-09-26T21:15:07.170Z,1537996507.170 [trackPatchFDOM:F.OffshoreEnvelope](DEBUG): Initialize OffshoreEnvelopeComponent.
2018-09-26T21:15:07.170Z,1537996507.170 [trackPatchFDOM:G.WaterDepthEnvelope] Running Loop=1
2018-09-26T21:15:07.170Z,1537996507.170 [trackPatchFDOM:G.WaterDepthEnvelope](DEBUG): Initialize WaterDepthEnvelopeComponent.
2018-09-26T21:15:07.170Z,1537996507.171 [trackPatchFDOM:H.Pitch] Running Loop=1
2018-09-26T21:15:07.171Z,1537996507.171 [trackPatchFDOM:H.Pitch](DEBUG): Initialize.
2018-09-26T21:15:07.171Z,1537996507.171 [trackPatchFDOM:I.Buoyancy] Running Loop=1
2018-09-26T21:15:07.171Z,1537996507.171 [trackPatchFDOM:I.Buoyancy](DEBUG): Initialize Buoyancy Component.
2018-09-26T21:15:07.171Z,1537996507.171 [trackPatchFDOM:Science] Running Loop=1
2018-09-26T21:15:07.171Z,1537996507.171 [trackPatchFDOM:Science](DEBUG): Aggregate::initialize trackPatchFDOM:Science
2018-09-26T21:15:07.171Z,1537996507.171 [trackPatchFDOM:Science:A] Running Loop=1
2018-09-26T21:15:07.171Z,1537996507.171 [trackPatchFDOM:Science:B] Running Loop=1
2018-09-26T21:15:07.171Z,1537996507.171 [trackPatchFDOM:Science:C] Running Loop=1
2018-09-26T21:15:07.171Z,1537996507.171 [trackPatchFDOM:Science:D] Running Loop=1
2018-09-26T21:15:07.172Z,1537996507.172 [trackPatchFDOM:Science:E] Running Loop=1
2018-09-26T21:15:07.172Z,1537996507.172 [trackPatchFDOM:Science:F] Running Loop=1
2018-09-26T21:15:07.172Z,1537996507.172 [trackPatchFDOM:Science:G] Running Loop=1
2018-09-26T21:15:07.172Z,1537996507.172 [trackPatchFDOM:Science:Read_Oil] Running Loop=1
2018-09-26T21:15:07.172Z,1537996507.172 [trackPatchFDOM:Science:PeakDetectChl] Running Loop=1
2018-09-26T21:15:07.172Z,1537996507.172 [trackPatchFDOM:Science:PeakDetectChl](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectChl
2018-09-26T21:15:07.172Z,1537996507.172 [trackPatchFDOM:Science:PeakDetectChl:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T21:15:07.172Z,1537996507.172 [trackPatchFDOM:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T21:15:07.178Z,1537996507.178 [trackPatchFDOM:Science:HighestChlPeakReport] Running Loop=1
2018-09-26T21:15:07.178Z,1537996507.178 [trackPatchFDOM:Science:HighestChlPeakReport](DEBUG): Aggregate::initialize trackPatchFDOM:Science:HighestChlPeakReport
2018-09-26T21:15:07.178Z,1537996507.178 [trackPatchFDOM:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Running Loop=1
2018-09-26T21:15:07.178Z,1537996507.178 [trackPatchFDOM:Science:HighestChlPeakReport:A.PeakDetectHorizontal](INFO): Initialize.
2018-09-26T21:15:07.179Z,1537996507.179 [trackPatchFDOM:Science:PeakDetectNO3] Running Loop=1
2018-09-26T21:15:07.179Z,1537996507.179 [trackPatchFDOM:Science:PeakDetectNO3](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectNO3
2018-09-26T21:15:07.179Z,1537996507.179 [trackPatchFDOM:Science:PeakDetectNO3:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T21:15:07.179Z,1537996507.179 [trackPatchFDOM:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T21:15:07.180Z,1537996507.180 [trackPatchFDOM:Science:PeakDetectOil] Running Loop=1
2018-09-26T21:15:07.180Z,1537996507.180 [trackPatchFDOM:Science:PeakDetectOil](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectOil
2018-09-26T21:15:07.180Z,1537996507.180 [trackPatchFDOM:Science:PeakDetectOil:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T21:15:07.180Z,1537996507.180 [trackPatchFDOM:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T21:15:07.186Z,1537996507.186 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T21:15:07.186Z,1537996507.186 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::initialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T21:15:07.186Z,1537996507.186 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Running Loop=1
2018-09-26T21:15:07.186Z,1537996507.186 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Initialize.
2018-09-26T21:15:07.188Z,1537996507.188 [trackPatchFDOM:K.SetSpeed] Running Loop=1
2018-09-26T21:15:07.188Z,1537996507.188 [trackPatchFDOM:K.SetSpeed](DEBUG): Initialize.
2018-09-26T21:15:07.188Z,1537996507.188 [trackPatchFDOM:L.DepthEnvelope] Running Loop=1
2018-09-26T21:15:07.188Z,1537996507.188 [trackPatchFDOM:L.DepthEnvelope](DEBUG): Initialize DepthEnvelopeComponent.
2018-09-26T21:15:07.188Z,1537996507.188 [trackPatchFDOM:M.YoYo] Running Loop=1
2018-09-26T21:15:07.188Z,1537996507.188 [trackPatchFDOM:M.YoYo](DEBUG): Initialize YoYoComponent.
2018-09-26T21:15:07.193Z,1537996507.193 [trackPatchFDOM:SurfaceCommsSplit] Running Loop=1
2018-09-26T21:15:07.193Z,1537996507.193 [trackPatchFDOM:SurfaceCommsSplit](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceCommsSplit
2018-09-26T21:15:07.193Z,1537996507.193 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface] Running Loop=1
2018-09-26T21:15:07.193Z,1537996507.193 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-26T21:15:07.194Z,1537996507.194 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-26T21:15:07.194Z,1537996507.194 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-26T21:15:07.194Z,1537996507.194 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-26T21:15:07.195Z,1537996507.195 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-26T21:15:07.195Z,1537996507.195 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-26T21:15:07.196Z,1537996507.196 [trackPatchFDOM:M.YoYo] Running Loop=1
2018-09-26T21:15:07.201Z,1537996507.201 [trackPatchFDOM:L.DepthEnvelope] Running Loop=1
2018-09-26T21:15:07.203Z,1537996507.203 [trackPatchFDOM:K.SetSpeed] Running Loop=1
2018-09-26T21:15:07.204Z,1537996507.204 [trackPatchFDOM:Science] Running Loop=1
2018-09-26T21:15:07.231Z,1537996507.231 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T21:15:07.232Z,1537996507.232 [trackPatchFDOM:Science:PeakDetectOil] Stopped
2018-09-26T21:15:07.232Z,1537996507.232 [trackPatchFDOM:Science:PeakDetectOil](DEBUG): Aggregate::uninitialize trackPatchFDOM:Science:PeakDetectOil
2018-09-26T21:15:07.232Z,1537996507.232 [trackPatchFDOM:Science:PeakDetectOil:A.PeakDetectVsDepth] Stopped
2018-09-26T21:15:07.232Z,1537996507.232 [trackPatchFDOM:Science:PeakDetectOil:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T21:15:07.232Z,1537996507.232 [trackPatchFDOM:Science:PeakDetectNO3] Stopped
2018-09-26T21:15:07.232Z,1537996507.232 [trackPatchFDOM:Science:PeakDetectNO3](DEBUG): Aggregate::uninitialize trackPatchFDOM:Science:PeakDetectNO3
2018-09-26T21:15:07.232Z,1537996507.232 [trackPatchFDOM:Science:PeakDetectNO3:A.PeakDetectVsDepth] Stopped
2018-09-26T21:15:07.232Z,1537996507.232 [trackPatchFDOM:Science:PeakDetectNO3:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T21:15:07.237Z,1537996507.237 [trackPatchFDOM:Science:HighestChlPeakReport] Stopped
2018-09-26T21:15:07.237Z,1537996507.237 [trackPatchFDOM:Science:HighestChlPeakReport](DEBUG): Aggregate::uninitialize trackPatchFDOM:Science:HighestChlPeakReport
2018-09-26T21:15:07.237Z,1537996507.237 [trackPatchFDOM:Science:HighestChlPeakReport:A.PeakDetectHorizontal] Stopped
2018-09-26T21:15:07.237Z,1537996507.237 [trackPatchFDOM:Science:HighestChlPeakReport:A.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-26T21:15:07.237Z,1537996507.237 [trackPatchFDOM:Science:PeakDetectChl] Stopped
2018-09-26T21:15:07.237Z,1537996507.237 [trackPatchFDOM:Science:PeakDetectChl](DEBUG): Aggregate::uninitialize trackPatchFDOM:Science:PeakDetectChl
2018-09-26T21:15:07.237Z,1537996507.237 [trackPatchFDOM:Science:PeakDetectChl:A.PeakDetectVsDepth] Stopped
2018-09-26T21:15:07.237Z,1537996507.237 [trackPatchFDOM:Science:PeakDetectChl:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T21:15:07.238Z,1537996507.238 [trackPatchFDOM:Science:Read_Oil] Running Loop=1
2018-09-26T21:15:07.238Z,1537996507.238 [trackPatchFDOM:Science:Read_Oil](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_chlorophyll_in_sea_water
2018-09-26T21:15:07.239Z,1537996507.239 [trackPatchFDOM:Science:G] Stopped
2018-09-26T21:15:07.239Z,1537996507.239 [trackPatchFDOM:Science:F] Stopped
2018-09-26T21:15:07.239Z,1537996507.239 [trackPatchFDOM:Science:E] Stopped
2018-09-26T21:15:07.239Z,1537996507.239 [trackPatchFDOM:Science:D] Stopped
2018-09-26T21:15:07.239Z,1537996507.239 [trackPatchFDOM:Science:C] Running Loop=1
2018-09-26T21:15:07.240Z,1537996507.240 [trackPatchFDOM:Science:C](DEBUG): Initialize ReadDataComponent to sense sea_water_temperature
2018-09-26T21:15:07.240Z,1537996507.240 [trackPatchFDOM:Science:C](DEBUG): Initialize ReadDataComponent to sense sea_water_salinity
2018-09-26T21:15:07.249Z,1537996507.249 [trackPatchFDOM:Science:B] Stopped
2018-09-26T21:15:07.249Z,1537996507.249 [trackPatchFDOM:Science:A] Running Loop=1
2018-09-26T21:15:07.250Z,1537996507.250 [trackPatchFDOM:Science:A](DEBUG): Initialize ReadDataComponent to sense mass_concentration_of_oxygen_in_sea_water
2018-09-26T21:15:07.251Z,1537996507.251 [trackPatchFDOM:I.Buoyancy] Running Loop=1
2018-09-26T21:15:07.252Z,1537996507.252 [trackPatchFDOM:H.Pitch] Running Loop=1
2018-09-26T21:15:07.253Z,1537996507.253 [trackPatchFDOM:G.WaterDepthEnvelope] Running Loop=1
2018-09-26T21:15:07.254Z,1537996507.254 [trackPatchFDOM:F.OffshoreEnvelope] Running Loop=1
2018-09-26T21:15:07.255Z,1537996507.255 [trackPatchFDOM:NeedComms] Running Loop=1
2018-09-26T21:15:07.255Z,1537996507.255 [trackPatchFDOM:NeedComms](DEBUG): Aggregate::initialize trackPatchFDOM:NeedComms
2018-09-26T21:15:07.256Z,1537996507.256 [trackPatchFDOM:NeedComms:A] Running Loop=1
2018-09-26T21:15:07.256Z,1537996507.256 [trackPatchFDOM:NeedComms:A](IMPORTANT): NeedComms Timeout Surfacing
2018-09-26T21:15:07.262Z,1537996507.262 [trackPatchFDOM:NeedComms:A] Stopped
2018-09-26T21:15:07.262Z,1537996507.262 [trackPatchFDOM:NeedComms:B] Running Loop=1
2018-09-26T21:15:07.262Z,1537996507.262 [trackPatchFDOM:NeedComms:B](DEBUG): Aggregate::initialize trackPatchFDOM:NeedComms:B
2018-09-26T21:15:07.267Z,1537996507.267 [trackPatchFDOM:SurfaceCommsSplit:B] Running Loop=1
2018-09-26T21:15:07.267Z,1537996507.267 [trackPatchFDOM:SurfaceCommsSplit:B](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceCommsSplit:B
2018-09-26T21:15:07.267Z,1537996507.267 [trackPatchFDOM:SurfaceCommsSplit:B:A] Running Loop=1
2018-09-26T21:15:07.267Z,1537996507.267 [trackPatchFDOM:B.DepthEnvelope] Running Loop=1
2018-09-26T21:15:07.268Z,1537996507.268 [trackPatchFDOM:A.AltitudeEnvelope] Running Loop=1
2018-09-26T21:15:07.457Z,1537996507.457 [CTD_NeilBrown](INFO): Opening uart, block timeout 10ths=4
2018-09-26T21:15:07.475Z,1537996507.475 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-26T21:15:07.475Z,1537996507.475 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-26T21:15:07.572Z,1537996507.572 [trackPatchFDOM:SurfaceComms] Running Loop=1
2018-09-26T21:15:07.572Z,1537996507.572 [trackPatchFDOM:SurfaceComms](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceComms
2018-09-26T21:15:07.572Z,1537996507.572 [trackPatchFDOM:SurfaceComms:SurfaceComms] Running Loop=1
2018-09-26T21:15:07.572Z,1537996507.572 [trackPatchFDOM:SurfaceComms:SurfaceComms](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceComms:SurfaceComms
2018-09-26T21:15:07.572Z,1537996507.572 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface] Running Loop=1
2018-09-26T21:15:07.572Z,1537996507.572 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-26T21:15:07.576Z,1537996507.576 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-26T21:15:07.576Z,1537996507.576 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-26T21:15:07.577Z,1537996507.577 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T21:15:07.585Z,1537996507.585 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-26T21:15:07.585Z,1537996507.585 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-26T21:15:07.586Z,1537996507.586 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-26T21:15:07.599Z,1537996507.599 [trackPatchFDOM:SurfaceComms:SurfaceComms:B] Running Loop=1
2018-09-26T21:15:07.599Z,1537996507.599 [trackPatchFDOM:SurfaceComms:SurfaceComms:B](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceComms:SurfaceComms:B
2018-09-26T21:15:07.599Z,1537996507.599 [trackPatchFDOM:SurfaceComms:SurfaceComms:B:A] Running Loop=1
2018-09-26T21:15:07.600Z,1537996507.600 [trackPatchFDOM:SurfaceCommsSplit:B:A](INFO): ##UnpackSplit##
2018-09-26T21:15:07.601Z,1537996507.601 [trackPatchFDOM:SurfaceCommsSplit:B:A] Stopped
2018-09-26T21:15:07.602Z,1537996507.602 [trackPatchFDOM:SurfaceCommsSplit:B](INFO): Completed trackPatchFDOM:SurfaceCommsSplit:B
2018-09-26T21:15:07.602Z,1537996507.602 [trackPatchFDOM:SurfaceCommsSplit:B] Stopped
2018-09-26T21:15:07.602Z,1537996507.602 [trackPatchFDOM:SurfaceCommsSplit:B](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceCommsSplit:B
2018-09-26T21:15:07.602Z,1537996507.602 [trackPatchFDOM:SurfaceCommsSplit:C] Running Loop=1
2018-09-26T21:15:07.602Z,1537996507.602 [trackPatchFDOM:SurfaceCommsSplit:C](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceCommsSplit:C
2018-09-26T21:15:07.602Z,1537996507.602 [trackPatchFDOM:SurfaceCommsSplit:C:A] Running Loop=1
2018-09-26T21:15:07.984Z,1537996507.984 [trackPatchFDOM:M.YoYo] Preempted
2018-09-26T21:15:07.984Z,1537996507.984 [trackPatchFDOM:L.DepthEnvelope] Preempted
2018-09-26T21:15:07.984Z,1537996507.984 [trackPatchFDOM:K.SetSpeed] Preempted
2018-09-26T21:15:07.989Z,1537996507.989 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T21:15:07.990Z,1537996507.990 [trackPatchFDOM:Science] Preempted
2018-09-26T21:15:07.990Z,1537996507.990 [trackPatchFDOM:Science:A] Preempted
2018-09-26T21:15:07.990Z,1537996507.990 [trackPatchFDOM:Science:C] Preempted
2018-09-26T21:15:07.990Z,1537996507.990 [trackPatchFDOM:Science:Read_Oil] Preempted
2018-09-26T21:15:07.990Z,1537996507.990 [trackPatchFDOM:Science:PeakDetectFDOM] Preempted
2018-09-26T21:15:07.990Z,1537996507.990 [trackPatchFDOM:I.Buoyancy] Preempted
2018-09-26T21:15:07.990Z,1537996507.990 [trackPatchFDOM:H.Pitch] Preempted
2018-09-26T21:15:07.990Z,1537996507.990 [trackPatchFDOM:G.WaterDepthEnvelope] Preempted
2018-09-26T21:15:07.990Z,1537996507.990 [trackPatchFDOM:F.OffshoreEnvelope] Preempted
2018-09-26T21:15:07.992Z,1537996507.992 [trackPatchFDOM:SurfaceCommsSplit:C:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-26T21:15:08.401Z,1537996508.401 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T21:15:09.638Z,1537996509.638 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-26T21:15:11.214Z,1537996511.214 [Aanderaa_O2](INFO): Powering down
2018-09-26T21:16:51.495Z,1537996611.495 [NAL9602](FAULT): GPS failed to acquire within timeout.
2018-09-26T21:16:51.495Z,1537996611.495 [NAL9602] Data Fault, FailCount= 1
2018-09-26T21:16:51.495Z,1537996611.495 [NAL9602](ERROR): Data Fault
2018-09-26T21:16:51.567Z,1537996611.567 [CBIT](ERROR): Data Fault in component: NAL9602
2018-09-26T21:16:51.907Z,1537996611.907 [NAL9602](INFO): Powering down
2018-09-26T21:16:52.798Z,1537996612.798 [CBIT](INFO): Clearing failed state for component NAL9602
2018-09-26T21:16:52.798Z,1537996612.798 [NAL9602] No Fault, FailCount= 1
2018-09-26T21:17:22.190Z,1537996642.190 [NAL9602](INFO): Powering up NAL9602
2018-09-26T21:17:33.390Z,1537996653.390 [NAL9602](INFO): NAL9602 initialized
2018-09-26T21:20:05.842Z,1537996805.842 [NAL9602](INFO): GPS fix at 20180926T212005: (36.811888, -121.828008)
2018-09-26T21:20:05.895Z,1537996805.895 [trackPatchFDOM:SurfaceCommsSplit:C:A] Stopped
2018-09-26T21:20:05.895Z,1537996805.895 [trackPatchFDOM:SurfaceCommsSplit:C:B] Running Loop=1
2018-09-26T21:20:06.304Z,1537996806.304 [trackPatchFDOM:SurfaceCommsSplit:C:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-26T21:20:11.066Z,1537996811.066 [DataOverHttps](INFO): Sending 81 bytes from file Logs/20180926T190706/Courier0042.lzma
2018-09-26T21:20:11.839Z,1537996811.839 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Courier0042.lzma.bak
2018-09-26T21:20:11.839Z,1537996811.839 [DataOverHttps](INFO): SBD MOMSN=8601681
2018-09-26T21:20:20.872Z,1537996820.872 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180926T190706/Courier0045.lzma
2018-09-26T21:20:21.662Z,1537996821.662 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Courier0045.lzma.bak
2018-09-26T21:20:21.662Z,1537996821.662 [DataOverHttps](INFO): SBD MOMSN=8601684
2018-09-26T21:20:31.518Z,1537996831.518 [DataOverHttps](INFO): Sending 808 bytes from file Logs/20180926T190706/Express0043.lzma
2018-09-26T21:20:32.306Z,1537996832.306 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Express0043.lzma.bak
2018-09-26T21:20:32.306Z,1537996832.306 [DataOverHttps](INFO): SBD MOMSN=8601686
2018-09-26T21:20:41.497Z,1537996841.497 [NAL9602](INFO): Powering down
2018-09-26T21:20:41.674Z,1537996841.674 [DataOverHttps](INFO): Sending 25 bytes from file Logs/20180926T190706/Express0046.lzma
2018-09-26T21:20:42.414Z,1537996842.414 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Express0046.lzma.bak
2018-09-26T21:20:42.414Z,1537996842.414 [DataOverHttps](INFO): SBD MOMSN=8601721
2018-09-26T21:20:43.148Z,1537996843.148 [trackPatchFDOM:SurfaceCommsSplit:C:B] Stopped
2018-09-26T21:20:43.149Z,1537996843.149 [trackPatchFDOM:SurfaceCommsSplit:C:C] Running Loop=1
2018-09-26T21:20:43.274Z,1537996843.274 [trackPatchFDOM:SurfaceCommsSplit:C:C](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-26T21:20:43.628Z,1537996843.628 [NAL9602](INFO): Powering up
2018-09-26T21:20:54.622Z,1537996854.622 [NAL9602](INFO): NAL9602 initialized
2018-09-26T21:21:09.413Z,1537996869.413 [NAL9602](INFO): SBD MO Status=0, MOMSN=1737, MT Status=0, MTMSN=0
2018-09-26T21:21:09.413Z,1537996869.413 [NAL9602](INFO): No messages in MT queue
2018-09-26T21:23:03.019Z,1537996983.019 [NAL9602](INFO): GPS fix at 20180926T212302: (36.811839, -121.828031)
2018-09-26T21:23:03.098Z,1537996983.098 [trackPatchFDOM:SurfaceCommsSplit:C:C] Stopped
2018-09-26T21:23:03.098Z,1537996983.098 [trackPatchFDOM:SurfaceCommsSplit:C](INFO): Completed trackPatchFDOM:SurfaceCommsSplit:C
2018-09-26T21:23:03.098Z,1537996983.098 [trackPatchFDOM:SurfaceCommsSplit:C] Stopped
2018-09-26T21:23:03.099Z,1537996983.099 [trackPatchFDOM:SurfaceCommsSplit:C](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceCommsSplit:C
2018-09-26T21:23:03.100Z,1537996983.100 [trackPatchFDOM:SurfaceCommsSplit](INFO): Completed trackPatchFDOM:SurfaceCommsSplit
2018-09-26T21:23:03.100Z,1537996983.100 [trackPatchFDOM:SurfaceCommsSplit] Stopped
2018-09-26T21:23:03.100Z,1537996983.100 [trackPatchFDOM:SurfaceCommsSplit](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceCommsSplit
2018-09-26T21:23:03.100Z,1537996983.100 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface] Stopped
2018-09-26T21:23:03.100Z,1537996983.100 [trackPatchFDOM:SurfaceCommsSplit:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-26T21:23:03.100Z,1537996983.100 [trackPatchFDOM:PatchDetectHorizontal] Running Loop=1
2018-09-26T21:23:03.100Z,1537996983.100 [trackPatchFDOM:PatchDetectHorizontal](DEBUG): Aggregate::initialize trackPatchFDOM:PatchDetectHorizontal
2018-09-26T21:23:03.105Z,1537996983.105 [trackPatchFDOM:PatchDetectHorizontal:AssignPatchDetectOn] Running Loop=1
2018-09-26T21:23:03.489Z,1537996983.489 [trackPatchFDOM:PatchDetectHorizontal:AssignPatchDetectOn] Stopped
2018-09-26T21:23:03.490Z,1537996983.490 [trackPatchFDOM:PatchDetectHorizontal:C] Running Loop=1
2018-09-26T21:23:03.490Z,1537996983.490 [trackPatchFDOM:M.YoYo] Running Loop=1
2018-09-26T21:23:03.490Z,1537996983.490 [trackPatchFDOM:L.DepthEnvelope] Running Loop=1
2018-09-26T21:23:03.491Z,1537996983.491 [trackPatchFDOM:K.SetSpeed] Running Loop=1
2018-09-26T21:23:03.492Z,1537996983.492 [trackPatchFDOM:Science] Running Loop=1
2018-09-26T21:23:03.505Z,1537996983.505 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T21:23:03.505Z,1537996983.505 [trackPatchFDOM:Science:Read_Oil] Running Loop=1
2018-09-26T21:23:03.505Z,1537996983.505 [trackPatchFDOM:Science:C] Running Loop=1
2018-09-26T21:23:03.506Z,1537996983.506 [trackPatchFDOM:Science:A] Running Loop=1
2018-09-26T21:23:03.506Z,1537996983.506 [trackPatchFDOM:I.Buoyancy] Running Loop=1
2018-09-26T21:23:03.506Z,1537996983.506 [trackPatchFDOM:H.Pitch] Running Loop=1
2018-09-26T21:23:03.507Z,1537996983.507 [trackPatchFDOM:G.WaterDepthEnvelope] Running Loop=1
2018-09-26T21:23:03.507Z,1537996983.507 [trackPatchFDOM:F.OffshoreEnvelope] Running Loop=1
2018-09-26T21:23:03.508Z,1537996983.508 [trackPatchFDOM:SurfaceComms:SurfaceComms:B] Stopped
2018-09-26T21:23:03.508Z,1537996983.508 [trackPatchFDOM:SurfaceComms:SurfaceComms:B](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceComms:SurfaceComms:B
2018-09-26T21:23:03.508Z,1537996983.508 [trackPatchFDOM:SurfaceComms:SurfaceComms:B:A] Stopped
2018-09-26T21:23:03.510Z,1537996983.510 [trackPatchFDOM:SurfaceComms:SurfaceComms:C] Running Loop=1
2018-09-26T21:23:03.510Z,1537996983.510 [trackPatchFDOM:SurfaceComms:SurfaceComms:C](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceComms:SurfaceComms:C
2018-09-26T21:23:03.510Z,1537996983.510 [trackPatchFDOM:SurfaceComms:SurfaceComms:C:A] Running Loop=1
2018-09-26T21:23:03.730Z,1537996983.730 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-26T21:23:03.730Z,1537996983.730 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-26T21:23:03.822Z,1537996983.822 [CTD_NeilBrown](INFO): Opening uart, block timeout 10ths=4
2018-09-26T21:23:03.885Z,1537996983.885 [trackPatchFDOM:M.YoYo] Preempted
2018-09-26T21:23:03.885Z,1537996983.885 [trackPatchFDOM:L.DepthEnvelope] Preempted
2018-09-26T21:23:03.885Z,1537996983.885 [trackPatchFDOM:K.SetSpeed] Preempted
2018-09-26T21:23:03.885Z,1537996983.885 [trackPatchFDOM:Science] Preempted
2018-09-26T21:23:03.885Z,1537996983.885 [trackPatchFDOM:Science:A] Preempted
2018-09-26T21:23:03.885Z,1537996983.885 [trackPatchFDOM:Science:C] Preempted
2018-09-26T21:23:03.885Z,1537996983.885 [trackPatchFDOM:Science:Read_Oil] Preempted
2018-09-26T21:23:03.885Z,1537996983.885 [trackPatchFDOM:Science:PeakDetectFDOM] Preempted
2018-09-26T21:23:03.885Z,1537996983.885 [trackPatchFDOM:I.Buoyancy] Preempted
2018-09-26T21:23:03.885Z,1537996983.885 [trackPatchFDOM:H.Pitch] Preempted
2018-09-26T21:23:03.886Z,1537996983.886 [trackPatchFDOM:G.WaterDepthEnvelope] Preempted
2018-09-26T21:23:03.886Z,1537996983.886 [trackPatchFDOM:F.OffshoreEnvelope] Preempted
2018-09-26T21:23:03.887Z,1537996983.887 [trackPatchFDOM:SurfaceComms:SurfaceComms:C:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-26T21:23:03.945Z,1537996983.945 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T21:23:05.897Z,1537996985.897 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-26T21:23:08.539Z,1537996988.539 [NAL9602](INFO): GPS fix at 20180926T212307: (36.811825, -121.828034)
2018-09-26T21:23:08.610Z,1537996988.610 [trackPatchFDOM:SurfaceComms:SurfaceComms:C:A] Stopped
2018-09-26T21:23:08.611Z,1537996988.611 [trackPatchFDOM:SurfaceComms:SurfaceComms:C:B] Running Loop=1
2018-09-26T21:23:09.009Z,1537996989.009 [Aanderaa_O2](INFO): Powering down
2018-09-26T21:23:09.117Z,1537996989.118 [trackPatchFDOM:SurfaceComms:SurfaceComms:C:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2018-09-26T21:23:13.633Z,1537996993.633 [DataOverHttps](INFO): Sending 63 bytes from file Logs/20180926T190706/Courier0048.lzma
2018-09-26T21:23:14.413Z,1537996994.413 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Courier0048.lzma.bak
2018-09-26T21:23:14.413Z,1537996994.413 [DataOverHttps](INFO): SBD MOMSN=8601724
2018-09-26T21:23:23.880Z,1537997003.880 [DataOverHttps](INFO): Sending 62 bytes from file Logs/20180926T190706/Express0049.lzma
2018-09-26T21:23:24.658Z,1537997004.658 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Express0049.lzma.bak
2018-09-26T21:23:24.658Z,1537997004.658 [DataOverHttps](INFO): SBD MOMSN=8601727
2018-09-26T21:23:25.335Z,1537997005.335 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-32768,V
2018-09-26T21:23:25.349Z,1537997005.349 [trackPatchFDOM:SurfaceComms:SurfaceComms:C:B] Stopped
2018-09-26T21:23:25.350Z,1537997005.350 [trackPatchFDOM:SurfaceComms:SurfaceComms:C:C] Running Loop=1
2018-09-26T21:23:25.510Z,1537997005.510 [trackPatchFDOM:SurfaceComms:SurfaceComms:C:C](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2018-09-26T21:23:29.664Z,1537997009.664 [NAL9602](INFO): GPS fix at 20180926T212329: (36.811804, -121.828037)
2018-09-26T21:23:29.738Z,1537997009.738 [trackPatchFDOM:SurfaceComms:SurfaceComms:C:C] Stopped
2018-09-26T21:23:29.738Z,1537997009.738 [trackPatchFDOM:SurfaceComms:SurfaceComms:C](INFO): Completed trackPatchFDOM:SurfaceComms:SurfaceComms:C
2018-09-26T21:23:29.739Z,1537997009.739 [trackPatchFDOM:SurfaceComms:SurfaceComms:C] Stopped
2018-09-26T21:23:29.739Z,1537997009.739 [trackPatchFDOM:SurfaceComms:SurfaceComms:C](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceComms:SurfaceComms:C
2018-09-26T21:23:29.740Z,1537997009.740 [trackPatchFDOM:SurfaceComms:SurfaceComms](INFO): Completed trackPatchFDOM:SurfaceComms:SurfaceComms
2018-09-26T21:23:29.740Z,1537997009.740 [trackPatchFDOM:SurfaceComms:SurfaceComms] Stopped
2018-09-26T21:23:29.740Z,1537997009.740 [trackPatchFDOM:SurfaceComms:SurfaceComms](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceComms:SurfaceComms
2018-09-26T21:23:29.740Z,1537997009.740 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface] Stopped
2018-09-26T21:23:29.740Z,1537997009.740 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-26T21:23:29.740Z,1537997009.740 [trackPatchFDOM:SurfaceComms](INFO): Completed trackPatchFDOM:SurfaceComms
2018-09-26T21:23:29.740Z,1537997009.740 [trackPatchFDOM:SurfaceComms] Stopped
2018-09-26T21:23:29.740Z,1537997009.740 [trackPatchFDOM:SurfaceComms](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceComms
2018-09-26T21:23:30.072Z,1537997010.072 [trackPatchFDOM:PatchDetectHorizontal:C](IMPORTANT): Next: bearing for CrossLeg: -90.000000 arcdeg . WpMaxDistance = 800.000000 m . Current lat, lon = 36.811804 arcdeg , -121.828037 arcdeg .
2018-09-26T21:23:30.073Z,1537997010.073 [trackPatchFDOM:PatchDetectHorizontal:C] Stopped
2018-09-26T21:23:30.073Z,1537997010.073 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg] Running Loop=1
2018-09-26T21:23:30.073Z,1537997010.073 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg](DEBUG): Aggregate::initialize trackPatchFDOM:PatchDetectHorizontal:CrossLeg
2018-09-26T21:23:30.073Z,1537997010.073 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint] Running Loop=1
2018-09-26T21:23:30.073Z,1537997010.073 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-26T21:23:30.074Z,1537997010.074 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection] Running Loop=1
2018-09-26T21:23:30.074Z,1537997010.074 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection](DEBUG): Aggregate::initialize trackPatchFDOM:PatchDetectHorizontal:PatchDetection
2018-09-26T21:23:30.075Z,1537997010.075 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal] Running Loop=1
2018-09-26T21:23:30.075Z,1537997010.075 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](INFO): Initialize.
2018-09-26T21:23:30.076Z,1537997010.076 [trackPatchFDOM:M.YoYo] Running Loop=1
2018-09-26T21:23:30.077Z,1537997010.077 [trackPatchFDOM:L.DepthEnvelope] Running Loop=1
2018-09-26T21:23:30.078Z,1537997010.078 [trackPatchFDOM:K.SetSpeed] Running Loop=1
2018-09-26T21:23:30.079Z,1537997010.079 [trackPatchFDOM:Science] Running Loop=1
2018-09-26T21:23:30.081Z,1537997010.081 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T21:23:30.081Z,1537997010.081 [trackPatchFDOM:Science:Read_Oil] Running Loop=1
2018-09-26T21:23:30.081Z,1537997010.081 [trackPatchFDOM:Science:C] Running Loop=1
2018-09-26T21:23:30.082Z,1537997010.082 [trackPatchFDOM:Science:A] Running Loop=1
2018-09-26T21:23:30.082Z,1537997010.082 [trackPatchFDOM:I.Buoyancy] Running Loop=1
2018-09-26T21:23:30.082Z,1537997010.082 [trackPatchFDOM:H.Pitch] Running Loop=1
2018-09-26T21:23:30.083Z,1537997010.083 [trackPatchFDOM:G.WaterDepthEnvelope] Running Loop=1
2018-09-26T21:23:30.083Z,1537997010.083 [trackPatchFDOM:F.OffshoreEnvelope] Running Loop=1
2018-09-26T21:23:30.084Z,1537997010.084 [trackPatchFDOM:NeedComms:B](INFO): Completed trackPatchFDOM:NeedComms:B
2018-09-26T21:23:30.084Z,1537997010.084 [trackPatchFDOM:NeedComms:B] Stopped
2018-09-26T21:23:30.084Z,1537997010.084 [trackPatchFDOM:NeedComms:B](DEBUG): Aggregate::uninitialize trackPatchFDOM:NeedComms:B
2018-09-26T21:23:30.084Z,1537997010.084 [trackPatchFDOM:NeedComms](INFO): Completed trackPatchFDOM:NeedComms
2018-09-26T21:23:30.084Z,1537997010.084 [trackPatchFDOM:NeedComms] Stopped
2018-09-26T21:23:30.084Z,1537997010.084 [trackPatchFDOM:NeedComms](DEBUG): Aggregate::uninitialize trackPatchFDOM:NeedComms
2018-09-26T21:23:30.185Z,1537997010.185 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-26T21:23:30.185Z,1537997010.185 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-26T21:23:30.330Z,1537997010.330 [CTD_NeilBrown](INFO): Opening uart, block timeout 10ths=4
2018-09-26T21:23:30.441Z,1537997010.441 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T21:23:30.483Z,1537997010.483 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint] Stopped
2018-09-26T21:23:30.483Z,1537997010.483 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossSurfaceWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-26T21:23:30.483Z,1537997010.483 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:B] Running Loop=1
2018-09-26T21:23:30.483Z,1537997010.483 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:B](DEBUG): Aggregate::initialize trackPatchFDOM:PatchDetectHorizontal:CrossLeg:B
2018-09-26T21:23:30.853Z,1537997010.853 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T21:23:30.918Z,1537997010.918 [trackPatchFDOM:SurfaceComms] Running Loop=1
2018-09-26T21:23:30.919Z,1537997010.918 [trackPatchFDOM:SurfaceComms](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceComms
2018-09-26T21:23:30.919Z,1537997010.919 [trackPatchFDOM:SurfaceComms:SurfaceComms] Running Loop=1
2018-09-26T21:23:30.919Z,1537997010.919 [trackPatchFDOM:SurfaceComms:SurfaceComms](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceComms:SurfaceComms
2018-09-26T21:23:30.919Z,1537997010.919 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface] Running Loop=1
2018-09-26T21:23:30.919Z,1537997010.919 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-26T21:23:30.919Z,1537997010.919 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received depth rate setting nan m/s.
2018-09-26T21:23:30.920Z,1537997010.920 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received pitch setting 19.999999 degrees.
2018-09-26T21:23:30.920Z,1537997010.920 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received speed setting 1.000000 m/s.
2018-09-26T21:23:30.929Z,1537997010.929 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-26T21:23:30.929Z,1537997010.929 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-26T21:23:30.931Z,1537997010.931 [trackPatchFDOM:SurfaceComms:SurfaceComms:B] Running Loop=1
2018-09-26T21:23:30.931Z,1537997010.931 [trackPatchFDOM:SurfaceComms:SurfaceComms:B](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceComms:SurfaceComms:B
2018-09-26T21:23:30.931Z,1537997010.931 [trackPatchFDOM:SurfaceComms:SurfaceComms:B:A] Running Loop=1
2018-09-26T21:23:31.265Z,1537997011.265 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T21:23:31.314Z,1537997011.314 [trackPatchFDOM:SurfaceComms:SurfaceComms:B] Stopped
2018-09-26T21:23:31.314Z,1537997011.314 [trackPatchFDOM:SurfaceComms:SurfaceComms:B](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceComms:SurfaceComms:B
2018-09-26T21:23:31.314Z,1537997011.314 [trackPatchFDOM:SurfaceComms:SurfaceComms:B:A] Stopped
2018-09-26T21:23:31.314Z,1537997011.314 [trackPatchFDOM:SurfaceComms:SurfaceComms:C] Running Loop=1
2018-09-26T21:23:31.314Z,1537997011.314 [trackPatchFDOM:SurfaceComms:SurfaceComms:C](DEBUG): Aggregate::initialize trackPatchFDOM:SurfaceComms:SurfaceComms:C
2018-09-26T21:23:31.314Z,1537997011.314 [trackPatchFDOM:SurfaceComms:SurfaceComms:C:A] Running Loop=1
2018-09-26T21:23:31.674Z,1537997011.674 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T21:23:31.757Z,1537997011.757 [trackPatchFDOM:M.YoYo] Preempted
2018-09-26T21:23:31.757Z,1537997011.757 [trackPatchFDOM:L.DepthEnvelope] Preempted
2018-09-26T21:23:31.758Z,1537997011.758 [trackPatchFDOM:K.SetSpeed] Preempted
2018-09-26T21:23:31.758Z,1537997011.758 [trackPatchFDOM:Science] Preempted
2018-09-26T21:23:31.758Z,1537997011.758 [trackPatchFDOM:Science:A] Preempted
2018-09-26T21:23:31.758Z,1537997011.758 [trackPatchFDOM:Science:C] Preempted
2018-09-26T21:23:31.758Z,1537997011.758 [trackPatchFDOM:Science:Read_Oil] Preempted
2018-09-26T21:23:31.758Z,1537997011.758 [trackPatchFDOM:Science:PeakDetectFDOM] Preempted
2018-09-26T21:23:31.758Z,1537997011.758 [trackPatchFDOM:I.Buoyancy] Preempted
2018-09-26T21:23:31.758Z,1537997011.758 [trackPatchFDOM:H.Pitch] Preempted
2018-09-26T21:23:31.758Z,1537997011.758 [trackPatchFDOM:G.WaterDepthEnvelope] Preempted
2018-09-26T21:23:31.758Z,1537997011.758 [trackPatchFDOM:F.OffshoreEnvelope] Preempted
2018-09-26T21:23:32.345Z,1537997012.345 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-26T21:23:32.851Z,1537997012.851 [NAL9602](INFO): GPS fix at 20180926T212332: (36.811796, -121.828036)
2018-09-26T21:23:32.918Z,1537997012.918 [trackPatchFDOM:SurfaceComms:SurfaceComms:C:A] Stopped
2018-09-26T21:23:32.919Z,1537997012.919 [trackPatchFDOM:SurfaceComms:SurfaceComms:C:B] Running Loop=1
2018-09-26T21:23:34.145Z,1537997014.145 [Aanderaa_O2](INFO): Powering down
2018-09-26T21:23:39.397Z,1537997019.397 [DataOverHttps](INFO): Sending 61 bytes from file Logs/20180926T190706/Courier0051.lzma
2018-09-26T21:23:40.150Z,1537997020.150 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Courier0051.lzma.bak
2018-09-26T21:23:40.151Z,1537997020.151 [DataOverHttps](INFO): SBD MOMSN=8601729
2018-09-26T21:23:53.046Z,1537997033.046 [DataOverHttps](INFO): Sending 177 bytes from file Logs/20180926T190706/Express0052.lzma
2018-09-26T21:23:53.817Z,1537997033.817 [DataOverHttps](INFO): Moved sent file to Logs/20180926T190706/Express0052.lzma.bak
2018-09-26T21:23:53.817Z,1537997033.817 [DataOverHttps](INFO): SBD MOMSN=8601732
2018-09-26T21:23:54.474Z,1537997034.474 [trackPatchFDOM:SurfaceComms:SurfaceComms:C:B] Stopped
2018-09-26T21:23:54.475Z,1537997034.475 [trackPatchFDOM:SurfaceComms:SurfaceComms:C:C] Running Loop=1
2018-09-26T21:23:58.994Z,1537997038.994 [NAL9602](INFO): GPS fix at 20180926T212358: (36.811761, -121.828018)
2018-09-26T21:23:59.063Z,1537997039.063 [trackPatchFDOM:SurfaceComms:SurfaceComms:C:C] Stopped
2018-09-26T21:23:59.063Z,1537997039.063 [trackPatchFDOM:SurfaceComms:SurfaceComms:C](INFO): Completed trackPatchFDOM:SurfaceComms:SurfaceComms:C
2018-09-26T21:23:59.063Z,1537997039.063 [trackPatchFDOM:SurfaceComms:SurfaceComms:C] Stopped
2018-09-26T21:23:59.063Z,1537997039.063 [trackPatchFDOM:SurfaceComms:SurfaceComms:C](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceComms:SurfaceComms:C
2018-09-26T21:23:59.064Z,1537997039.064 [trackPatchFDOM:SurfaceComms:SurfaceComms](INFO): Completed trackPatchFDOM:SurfaceComms:SurfaceComms
2018-09-26T21:23:59.064Z,1537997039.064 [trackPatchFDOM:SurfaceComms:SurfaceComms] Stopped
2018-09-26T21:23:59.064Z,1537997039.064 [trackPatchFDOM:SurfaceComms:SurfaceComms](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceComms:SurfaceComms
2018-09-26T21:23:59.064Z,1537997039.064 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface] Stopped
2018-09-26T21:23:59.064Z,1537997039.064 [trackPatchFDOM:SurfaceComms:SurfaceComms:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-26T21:23:59.065Z,1537997039.065 [trackPatchFDOM:SurfaceComms](INFO): Completed trackPatchFDOM:SurfaceComms
2018-09-26T21:23:59.065Z,1537997039.065 [trackPatchFDOM:SurfaceComms] Stopped
2018-09-26T21:23:59.065Z,1537997039.065 [trackPatchFDOM:SurfaceComms](DEBUG): Aggregate::uninitialize trackPatchFDOM:SurfaceComms
2018-09-26T21:23:59.430Z,1537997039.430 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:B](INFO): Completed trackPatchFDOM:PatchDetectHorizontal:CrossLeg:B
2018-09-26T21:23:59.430Z,1537997039.430 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:B] Stopped
2018-09-26T21:23:59.430Z,1537997039.430 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:B](DEBUG): Aggregate::uninitialize trackPatchFDOM:PatchDetectHorizontal:CrossLeg:B
2018-09-26T21:23:59.430Z,1537997039.430 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint] Running Loop=1
2018-09-26T21:23:59.430Z,1537997039.430 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Initialize WaypointComponent.
2018-09-26T21:23:59.432Z,1537997039.432 [trackPatchFDOM:M.YoYo] Running Loop=1
2018-09-26T21:23:59.432Z,1537997039.432 [trackPatchFDOM:L.DepthEnvelope] Running Loop=1
2018-09-26T21:23:59.441Z,1537997039.441 [trackPatchFDOM:K.SetSpeed] Running Loop=1
2018-09-26T21:23:59.442Z,1537997039.442 [trackPatchFDOM:Science] Running Loop=1
2018-09-26T21:23:59.444Z,1537997039.444 [trackPatchFDOM:Science:PeakDetectFDOM] Running Loop=1
2018-09-26T21:23:59.444Z,1537997039.444 [trackPatchFDOM:Science:Read_Oil] Running Loop=1
2018-09-26T21:23:59.444Z,1537997039.444 [trackPatchFDOM:Science:C] Running Loop=1
2018-09-26T21:23:59.453Z,1537997039.453 [trackPatchFDOM:Science:A] Running Loop=1
2018-09-26T21:23:59.453Z,1537997039.453 [trackPatchFDOM:I.Buoyancy] Running Loop=1
2018-09-26T21:23:59.454Z,1537997039.454 [trackPatchFDOM:H.Pitch] Running Loop=1
2018-09-26T21:23:59.454Z,1537997039.454 [trackPatchFDOM:G.WaterDepthEnvelope] Running Loop=1
2018-09-26T21:23:59.454Z,1537997039.454 [trackPatchFDOM:F.OffshoreEnvelope] Running Loop=1
2018-09-26T21:23:59.506Z,1537997039.506 [WetLabsSeaOWL_UV_A](INFO): Opening uart, block timeout 10ths=4
2018-09-26T21:23:59.507Z,1537997039.507 [WetLabsSeaOWL_UV_A](INFO): Powering up
2018-09-26T21:23:59.632Z,1537997039.632 [CTD_NeilBrown](INFO): Opening uart, block timeout 10ths=4
2018-09-26T21:23:59.777Z,1537997039.777 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T21:24:00.185Z,1537997040.185 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T21:24:00.597Z,1537997040.597 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T21:24:01.009Z,1537997041.009 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T21:24:04.969Z,1537997044.969 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T21:24:07.357Z,1537997047.357 [Aanderaa_O2](DEBUG): Error parsing data: 4831F	648		346.606		107.259		13.822		29.428		30.656		39.772		9.116		376.6		787.9		373.2	



2018-09-26T21:24:07.357Z,1537997047.357 [Aanderaa_O2](DEBUG): Error parsing device response
2018-09-26T21:24:08.121Z,1537997048.121 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T21:24:08.555Z,1537997048.555 [Aanderaa_O2](DEBUG): Error parsing data: 4831F	648		346.968		107.355		13.815		29.420		30.648		39.759		9.111		376.7		786.9		373.5	


2018-09-26T21:24:08.555Z,1537997048.555 [Aanderaa_O2](DEBUG): Error parsing device response
2018-09-26T21:24:09.356Z,1537997049.356 [Aanderaa_O2](DEBUG): Error parsing data: 4831F	648		347.988		107.663		13.812		29.388		30.616		39.727		9.111		376.6		786.3		373.5	



2018-09-26T21:24:09.356Z,1537997049.356 [Aanderaa_O2](DEBUG): Error parsing device response
2018-09-26T21:24:10.558Z,1537997050.558 [Aanderaa_O2](DEBUG): Error parsing data: 4831F	648		346.770		107.288		13.813		29.427		30.655		39.761		9.106		376.6		783.4		373.5	

2018-09-26T21:24:10.558Z,1537997050.558 [Aanderaa_O2](DEBUG): Error parsing device response
2018-09-26T21:24:12.717Z,1537997052.717 [BuoyancyServo](FAULT): Overload Error
2018-09-26T21:24:12.717Z,1537997052.717 [BuoyancyServo] Hardware Fault, FailCount= 1
2018-09-26T21:24:12.717Z,1537997052.717 [BuoyancyServo](ERROR): Hardware Fault
2018-09-26T21:24:12.917Z,1537997052.917 [CBIT](ERROR): Hardware Fault in component: BuoyancyServo
2018-09-26T21:24:12.955Z,1537997052.955 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T21:24:13.076Z,1537997053.076 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-26T21:24:13.081Z,1537997053.081 [BuoyancyServo](INFO): Powering down
2018-09-26T21:24:15.195Z,1537997055.195 [CBIT](INFO): Clearing failed state for component BuoyancyServo
2018-09-26T21:24:15.195Z,1537997055.195 [BuoyancyServo] No Fault, FailCount= 1
2018-09-26T21:24:15.494Z,1537997055.494 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2018-09-26T21:24:15.614Z,1537997055.614 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2018-09-26T21:24:18.209Z,1537997058.209 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T21:24:21.161Z,1537997061.161 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T21:24:21.805Z,1537997061.805 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T21:24:24.097Z,1537997064.097 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T21:24:25.153Z,1537997065.153 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T21:24:31.463Z,1537997071.463 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T21:24:37.128Z,1537997077.128 [NAL9602](INFO): Powering down
2018-09-26T21:24:38.617Z,1537997078.617 [CTD_NeilBrown](DEBUG): serial timeout
2018-09-26T21:24:39.428Z,1537997079.428 [CommandLine](IMPORTANT): got command stop
2018-09-26T21:24:39.428Z,1537997079.428 [CommandLine](IMPORTANT): Scheduling is paused
2018-09-26T21:24:39.428Z,1537997079.428 [Supervisor](INFO): Stop Mission called by CommandLine::commandStop
2018-09-26T21:24:39.754Z,1537997079.754 [MissionManager](INFO): MissionManager is completed.
2018-09-26T21:24:39.754Z,1537997079.754 [MissionManager](INFO): Uninitializing Mission trackPatchFDOM
2018-09-26T21:24:39.754Z,1537997079.754 [trackPatchFDOM] Stopped
2018-09-26T21:24:39.754Z,1537997079.754 [trackPatchFDOM](DEBUG): Aggregate::uninitialize trackPatchFDOM
2018-09-26T21:24:39.754Z,1537997079.754 [trackPatchFDOM:A.AltitudeEnvelope] Stopped
2018-09-26T21:24:39.754Z,1537997079.754 [trackPatchFDOM:A.AltitudeEnvelope](DEBUG): Uninitialize AltitudeEnvelopeComponent.
2018-09-26T21:24:39.754Z,1537997079.754 [trackPatchFDOM:B.DepthEnvelope] Stopped
2018-09-26T21:24:39.754Z,1537997079.754 [trackPatchFDOM:B.DepthEnvelope](DEBUG): Uninitialize.
2018-09-26T21:24:39.754Z,1537997079.754 [trackPatchFDOM:F.OffshoreEnvelope] Stopped
2018-09-26T21:24:39.755Z,1537997079.755 [trackPatchFDOM:F.OffshoreEnvelope](DEBUG): Uninitialize OffshoreEnvelopeComponent.
2018-09-26T21:24:39.755Z,1537997079.755 [trackPatchFDOM:G.WaterDepthEnvelope] Stopped
2018-09-26T21:24:39.755Z,1537997079.755 [trackPatchFDOM:G.WaterDepthEnvelope](DEBUG): Uninitialize WaterDepthEnvelopeComponent.
2018-09-26T21:24:39.755Z,1537997079.755 [trackPatchFDOM:H.Pitch] Stopped
2018-09-26T21:24:39.755Z,1537997079.755 [trackPatchFDOM:I.Buoyancy] Stopped
2018-09-26T21:24:39.755Z,1537997079.755 [trackPatchFDOM:I.Buoyancy](DEBUG): Uninitialize Buoyancy Component.
2018-09-26T21:24:39.755Z,1537997079.755 [trackPatchFDOM:Science] Stopped
2018-09-26T21:24:39.755Z,1537997079.755 [trackPatchFDOM:Science](DEBUG): Aggregate::uninitialize trackPatchFDOM:Science
2018-09-26T21:24:39.755Z,1537997079.755 [trackPatchFDOM:Science:A] Stopped
2018-09-26T21:24:39.755Z,1537997079.755 [trackPatchFDOM:Science:C] Stopped
2018-09-26T21:24:39.755Z,1537997079.755 [trackPatchFDOM:Science:Read_Oil] Stopped
2018-09-26T21:24:39.755Z,1537997079.755 [trackPatchFDOM:Science:PeakDetectFDOM] Stopped
2018-09-26T21:24:39.756Z,1537997079.756 [trackPatchFDOM:Science:PeakDetectFDOM](DEBUG): Aggregate::uninitialize trackPatchFDOM:Science:PeakDetectFDOM
2018-09-26T21:24:39.756Z,1537997079.756 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth] Stopped
2018-09-26T21:24:39.756Z,1537997079.756 [trackPatchFDOM:Science:PeakDetectFDOM:A.PeakDetectVsDepth](DEBUG): Uninitialize.
2018-09-26T21:24:39.756Z,1537997079.756 [trackPatchFDOM:K.SetSpeed] Stopped
2018-09-26T21:24:39.756Z,1537997079.756 [trackPatchFDOM:K.SetSpeed](DEBUG): Uninitialize.
2018-09-26T21:24:39.756Z,1537997079.756 [trackPatchFDOM:L.DepthEnvelope] Stopped
2018-09-26T21:24:39.756Z,1537997079.756 [trackPatchFDOM:L.DepthEnvelope](DEBUG): Uninitialize.
2018-09-26T21:24:39.756Z,1537997079.756 [trackPatchFDOM:M.YoYo] Stopped
2018-09-26T21:24:39.756Z,1537997079.756 [trackPatchFDOM:M.YoYo](DEBUG): Uninitialize YoYoComponent.
2018-09-26T21:24:39.756Z,1537997079.756 [trackPatchFDOM:PatchDetectHorizontal] Stopped
2018-09-26T21:24:39.756Z,1537997079.756 [trackPatchFDOM:PatchDetectHorizontal](DEBUG): Aggregate::uninitialize trackPatchFDOM:PatchDetectHorizontal
2018-09-26T21:24:39.757Z,1537997079.757 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection] Stopped
2018-09-26T21:24:39.757Z,1537997079.757 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection](DEBUG): Aggregate::uninitialize trackPatchFDOM:PatchDetectHorizontal:PatchDetection
2018-09-26T21:24:39.757Z,1537997079.757 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal] Stopped
2018-09-26T21:24:39.757Z,1537997079.757 [trackPatchFDOM:PatchDetectHorizontal:PatchDetection:PeakDetectHorizontalTrigger.PeakDetectHorizontal](DEBUG): Uninitialize.
2018-09-26T21:24:39.757Z,1537997079.757 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg] Stopped
2018-09-26T21:24:39.757Z,1537997079.757 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg](DEBUG): Aggregate::uninitialize trackPatchFDOM:PatchDetectHorizontal:CrossLeg
2018-09-26T21:24:39.758Z,1537997079.758 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint] Stopped
2018-09-26T21:24:39.758Z,1537997079.758 [trackPatchFDOM:PatchDetectHorizontal:CrossLeg:CrossPeakWp.Waypoint](DEBUG): Uninitialize WaypointComponent.
2018-09-26T21:24:40.149Z,1537997080.149 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-26T21:24:40.232Z,1537997080.232 [MissionManager](IMPORTANT): Started mission Default
2018-09-26T21:24:40.237Z,1537997080.237 [Default] Running Loop=1
2018-09-26T21:24:40.237Z,1537997080.237 [Default](DEBUG): Aggregate::initialize Default
2018-09-26T21:24:40.237Z,1537997080.237 [Default:B.GoToSurface] Running Loop=1
2018-09-26T21:24:40.237Z,1537997080.237 [Default:B.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2018-09-26T21:24:40.237Z,1537997080.237 [Default:B.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2018-09-26T21:24:40.238Z,1537997080.238 [Default:B.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2018-09-26T21:24:40.238Z,1537997080.238 [Default:B.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2018-09-26T21:24:40.238Z,1537997080.238 [Default:B.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2018-09-26T21:24:40.239Z,1537997080.239 [Default:B.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2018-09-26T21:24:40.239Z,1537997080.239 [Default:A.Wait] Running Loop=1
2018-09-26T21:24:40.240Z,1537997080.240 [Default:A.Wait](DEBUG): Initialize Wait Component.
2018-09-26T21:24:40.669Z,1537997080.669 [Aanderaa_O2](INFO): Powering down
2018-09-26T21:24:46.662Z,1537997086.662 [Radio_Surface](INFO): Powering down
2018-09-26T21:24:46.742Z,1537997086.742 [ElevatorOffsetCalculator](INFO): New estimator for commanded vars: speed 1.00 m/s, pitch 30.00 deg, mass-position -22.00 mm (3 active estimators).
2018-09-26T21:24:53.651Z,1537997093.651 [Default:A.Wait](INFO): Done Waiting.
2018-09-26T21:24:53.651Z,1537997093.651 [Default:A.Wait] Stopped
2018-09-26T21:24:53.651Z,1537997093.651 [Default:A.Wait](DEBUG): Uninitialize Wait Component.
2018-09-26T21:25:08.050Z,1537997108.050 [Default:CheckIn] Running Loop=1
2018-09-26T21:25:08.050Z,1537997108.050 [Default:CheckIn](DEBUG): Aggregate::initialize Default:CheckIn
2018-09-26T21:25:08.050Z,1537997108.050 [Default:CheckIn:Read_GPS] Running Loop=1
2018-09-26T21:25:08.094Z,1537997108.094 [Radio_Surface](INFO): Powering up
2018-09-26T21:25:08.802Z,1537997108.802 [NAL9602](INFO): Powering up
2018-09-26T21:25:15.770Z,1537997115.770 [Radio_Surface](INFO): Powering down
2018-09-26T21:25:19.995Z,1537997119.995 [NAL9602](INFO): NAL9602 initialized
2018-09-26T21:25:22.654Z,1537997122.654 [Radio_Surface](INFO): Powering up
2018-09-26T21:25:34.793Z,1537997134.793 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T21:25:38.795Z,1537997138.795 [DataOverHttps](INFO): setting unavailable, lastComms_.elapsed()=60.309547
2018-09-26T21:25:56.804Z,1537997156.804 [NAL9602](INFO): SBD MO Status=0, MOMSN=1738, MT Status=0, MTMSN=0
2018-09-26T21:25:56.804Z,1537997156.804 [NAL9602](INFO): No messages in MT queue
2018-09-26T21:25:56.804Z,1537997156.804 [NAL9602](INFO): Failure count cleared after critical for NAL9602
2018-09-26T21:26:10.397Z,1537997170.397 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T21:26:45.197Z,1537997205.197 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T21:27:20.405Z,1537997240.405 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T21:27:55.995Z,1537997275.995 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T21:28:30.796Z,1537997310.796 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T21:29:06.392Z,1537997346.392 [DataOverHttps](INFO): Exceeded connect timeout, disconnecting.
2018-09-26T21:29:15.866Z,1537997355.866 [DataOverHttps](IMPORTANT): SBD MTMSN=20180926T212916
2018-09-26T21:29:15.869Z,1537997355.869 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.002965
2018-09-26T21:29:15.931Z,1537997355.931 [RDI_Pathfinder](ERROR): Failed to parse:
:BE,-32768,-32768,-32768,V
2018-09-26T21:29:16.721Z,1537997356.721 [RDI_Pathfinder](ERROR): Failed to parse:
:BI,-32768,-32768,-32768,-32768,V
2018-09-26T21:29:20.029Z,1537997360.029 [DataOverHttps](INFO): Received command:restart app
2018-09-26T21:29:20.071Z,1537997360.071 [CommandLine](IMPORTANT): got command restart application
2018-09-26T21:29:21.073Z,1537997361.073 [CommandLine ThreadHandler](INFO): Uninitializing protected caller thread.
2018-09-26T21:29:21.073Z,1537997361.073 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-09-26T21:29:21.149Z,1537997361.149 [Supervisor](DEBUG): Uninitializing supervisor and starting cleanup.  Bye!
2018-09-26T21:29:21.149Z,1537997361.149 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-09-26T21:29:21.150Z,1537997361.150 [CommandLine](INFO): Join timeout helper Thread ID is 1981
2018-09-26T21:29:21.157Z,1537997361.157 [ComponentRegistry](INFO): Shutting down NavChartDb ThreadHandler
2018-09-26T21:29:21.157Z,1537997361.157 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-09-26T21:29:21.158Z,1537997361.158 [NavChartDb](INFO): Join timeout helper Thread ID is 1982
2018-09-26T21:29:21.533Z,1537997361.533 [NavChartDb ThreadHandler](INFO): Uninitializing protected caller thread.
2018-09-26T21:29:21.533Z,1537997361.533 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-09-26T21:29:21.537Z,1537997361.537 [ComponentRegistry](INFO): Shutting down Radio_Surface ThreadHandler
2018-09-26T21:29:21.537Z,1537997361.537 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-09-26T21:29:21.537Z,1537997361.537 [Radio_Surface](INFO): Join timeout helper Thread ID is 1983
2018-09-26T21:29:21.642Z,1537997361.642 [Radio_Surface ThreadHandler](INFO): Uninitializing protected caller thread.
2018-09-26T21:29:21.643Z,1537997361.643 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-09-26T21:29:21.653Z,1537997361.653 [ComponentRegistry](INFO): Shutting down WetLabsSeaOWL_UV_A ThreadHandler
2018-09-26T21:29:21.653Z,1537997361.653 [WetLabsSeaOWL_UV_A ThreadHandler](INFO): Thread cancelled.
2018-09-26T21:29:21.653Z,1537997361.653 [WetLabsSeaOWL_UV_A](INFO): Join timeout helper Thread ID is 1984
2018-09-26T21:29:21.929Z,1537997361.929 [WetLabsSeaOWL_UV_A ThreadHandler](INFO): Uninitializing protected caller thread.
2018-09-26T21:29:21.929Z,1537997361.929 [WetLabsSeaOWL_UV_A](INFO): Powering down
2018-09-26T21:29:21.930Z,1537997361.930 [WetLabsSeaOWL_UV_A ThreadHandler](INFO): Thread cancelled.
2018-09-26T21:29:21.941Z,1537997361.941 [ComponentRegistry](INFO): Shutting down CTD_NeilBrown ThreadHandler
2018-09-26T21:29:21.941Z,1537997361.941 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled.
2018-09-26T21:29:21.941Z,1537997361.941 [CTD_NeilBrown](INFO): Join timeout helper Thread ID is 1985
2018-09-26T21:29:22.033Z,1537997362.033 [CTD_NeilBrown ThreadHandler](INFO): Uninitializing protected caller thread.
2018-09-26T21:29:22.033Z,1537997362.033 [CTD_NeilBrown](INFO): Powering down
2018-09-26T21:29:22.034Z,1537997362.034 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled.
2018-09-26T21:29:22.047Z,1537997362.047 [ComponentRegistry](INFO): Shutting down logger ThreadHandler
2018-09-26T21:29:22.047Z,1537997362.047 [logger ThreadHandler](INFO): Thread cancelled.
2018-09-26T21:29:22.047Z,1537997362.047 [logger](INFO): Join timeout helper Thread ID is 1986
2018-09-26T21:29:22.067Z,1537997362.067 [logger ThreadHandler](INFO): Uninitializing protected caller thread.
2018-09-26T21:29:22.067Z,1537997362.067 [logger ThreadHandler](INFO): Thread cancelled.
2018-09-26T21:29:22.085Z,1537997362.085 [ComponentRegistry](INFO): Shutting down CommandLine ThreadHandler
2018-09-26T21:29:22.086Z,1537997362.086 [CommandLine ThreadHandler](INFO): Thread cancelled.
2018-09-26T21:29:22.086Z,1537997362.086 [ComponentRegistry](INFO): Shutting down controlThread ThreadHandler
2018-09-26T21:29:22.086Z,1537997362.086 [controlThread ThreadHandler](INFO): Thread cancelled.
2018-09-26T21:29:22.086Z,1537997362.086 [controlThread](INFO): Join timeout helper Thread ID is 1987
2018-09-26T21:29:22.393Z,1537997362.393 [controlThread ThreadHandler](INFO): Uninitializing protected caller thread.
2018-09-26T21:29:22.393Z,1537997362.393 [controlThread](DEBUG): Uninitializing ControlThread
2018-09-26T21:29:22.394Z,1537997362.394 [Aanderaa_O2](INFO): Powering down
2018-09-26T21:29:22.395Z,1537997362.395 [AHRS_M2](INFO): Powering down
2018-09-26T21:29:22.466Z,1537997362.466 [NAL9602](INFO): Powering down
2018-09-26T21:29:22.537Z,1537997362.537 [RDI_Pathfinder](INFO): Powering down
2018-09-26T21:29:22.538Z,1537997362.538 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2018-09-26T21:29:22.539Z,1537997362.539 [ElevatorOffsetCalculator](DEBUG): Uninitializing ElevatorOffsetCalculator.
2018-09-26T21:29:22.540Z,1537997362.540 [NavChart](DEBUG): Uninitialize NavChart Navigation.
2018-09-26T21:29:22.541Z,1537997362.541 [MissionManager](INFO): Uninitializing Mission Default
2018-09-26T21:29:22.541Z,1537997362.541 [Default] Stopped
2018-09-26T21:29:22.541Z,1537997362.541 [Default](DEBUG): Aggregate::uninitialize Default
2018-09-26T21:29:22.541Z,1537997362.541 [Default:B.GoToSurface] Stopped
2018-09-26T21:29:22.541Z,1537997362.541 [Default:B.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2018-09-26T21:29:22.541Z,1537997362.541 [Default:CheckIn] Stopped
2018-09-26T21:29:22.541Z,1537997362.541 [Default:CheckIn](DEBUG): Aggregate::uninitialize Default:CheckIn
2018-09-26T21:29:22.541Z,1537997362.541 [Default:CheckIn:Read_GPS] Stopped
2018-09-26T21:29:22.545Z,1537997362.545 [VerticalControl](DEBUG): Uninitialize VerticalControlComponent.
2018-09-26T21:29:22.545Z,1537997362.545 [HorizontalControl](DEBUG): Uninitialize HorizontalControlComponent.
2018-09-26T21:29:22.545Z,1537997362.545 [SpeedControl](DEBUG): Uninitialize SpeedControlComponent.
2018-09-26T21:29:22.546Z,1537997362.546 [LoopControl](DEBUG): Uninitialize LoopControlComponent.
2018-09-26T21:29:22.546Z,1537997362.546 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2018-09-26T21:29:22.546Z,1537997362.546 [BuoyancyServo](INFO): Powering down
2018-09-26T21:29:22.561Z,1537997362.561 [ElevatorServo](DEBUG): Uninitialize Elevator Servo.
2018-09-26T21:29:22.561Z,1537997362.561 [ElevatorServo](INFO): Powering down
2018-09-26T21:29:22.562Z,1537997362.562 [MassServo](DEBUG): Uninitialize Mass Servo.
2018-09-26T21:29:22.562Z,1537997362.562 [MassServo](INFO): Powering down
2018-09-26T21:29:22.563Z,1537997362.563 [RudderServo](DEBUG): Uninitialize Rudder Servo.
2018-09-26T21:29:22.563Z,1537997362.563 [RudderServo](INFO): Powering down
2018-09-26T21:29:22.564Z,1537997362.564 [ThrusterServo](DEBUG): Uninitialize Thruster Servo.
2018-09-26T21:29:22.564Z,1537997362.564 [ThrusterServo](INFO): Powering down
2018-09-26T21:29:22.565Z,1537997362.565 [SBIT](DEBUG): Uninitialize SBIT Component.
2018-09-26T21:29:22.565Z,1537997362.565 [IBIT](DEBUG): Uninitialize IBIT Component.
2018-09-26T21:29:22.566Z,1537997362.566 [CBIT](DEBUG): Uninitialize CBIT Component.
2018-09-26T21:29:22.567Z,1537997362.567 [controlThread ThreadHandler](INFO): Thread cancelled.
2018-09-26T21:29:22.633Z,1537997362.633 [WetLabsSeaOWL_UV_A ThreadHandler](INFO): Thread cancelled.
2018-09-26T21:29:22.636Z,1537997362.636 [CTD_NeilBrown ThreadHandler](INFO): Thread cancelled.
2018-09-26T21:29:22.697Z,1537997362.697 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2018-09-26T21:29:22.739Z,1537997362.739 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2018-09-26T21:29:22.808Z,1537997362.808 [logger ThreadHandler](INFO): Thread cancelled.