INFO 2018-12-21 08:54:47,250Z lrauvNc4ToNetcdf.py processResampleNc4File():855 Reading /mbari/LRAUV/whoidhs/missionlogs/2018/20180926_20180927/20180927T150747/201809271507_201809271708.nc4 file...
INFO 2018-12-21 08:54:54,034Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources
INFO 2018-12-21 08:54:54,382Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources
INFO 2018-12-21 08:54:54,729Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources
INFO 2018-12-21 08:54:55,077Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources
INFO 2018-12-21 08:54:55,081Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator
INFO 2018-12-21 08:54:55,428Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator
INFO 2018-12-21 08:54:55,781Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator
INFO 2018-12-21 08:54:56,126Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator
INFO 2018-12-21 08:54:56,214Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen
INFO 2018-12-21 08:54:56,634Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group CTD_NeilBrown parameter sea_water_salinity renaming to salinity
INFO 2018-12-21 08:54:57,052Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group CTD_NeilBrown parameter sea_water_temperature renaming to temperature
WARNING 2018-12-21 08:54:57,052Z lrauvNc4ToNetcdf.py processResampleNc4File():937 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180926_20180927/20180927T150747/201809271507_201809271708.nc4
WARNING 2018-12-21 08:54:57,052Z lrauvNc4ToNetcdf.py processResampleNc4File():937 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180926_20180927/20180927T150747/201809271507_201809271708.nc4
WARNING 2018-12-21 08:54:57,052Z lrauvNc4ToNetcdf.py processResampleNc4File():937 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180926_20180927/20180927T150747/201809271507_201809271708.nc4
WARNING 2018-12-21 08:54:57,052Z lrauvNc4ToNetcdf.py processResampleNc4File():937 'downwelling_photosynthetic_photon_flux_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180926_20180927/20180927T150747/201809271507_201809271708.nc4
WARNING 2018-12-21 08:54:57,053Z lrauvNc4ToNetcdf.py processResampleNc4File():937 'mass_concentration_of_chlorophyll_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180926_20180927/20180927T150747/201809271507_201809271708.nc4
WARNING 2018-12-21 08:54:57,053Z lrauvNc4ToNetcdf.py processResampleNc4File():937 'Output470' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180926_20180927/20180927T150747/201809271507_201809271708.nc4
WARNING 2018-12-21 08:54:57,053Z lrauvNc4ToNetcdf.py processResampleNc4File():937 'Output650' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180926_20180927/20180927T150747/201809271507_201809271708.nc4
INFO 2018-12-21 08:54:57,088Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge
INFO 2018-12-21 08:54:57,122Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage
INFO 2018-12-21 08:54:57,126Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group NAL9602 parameter time_fix renaming to fix_time
INFO 2018-12-21 08:54:57,130Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude
INFO 2018-12-21 08:54:57,134Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude
WARNING 2018-12-21 08:54:57,134Z lrauvNc4ToNetcdf.py processResampleNc4File():937 'platform_average_current' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180926_20180927/20180927T150747/201809271507_201809271708.nc4
INFO 2018-12-21 08:54:57,175Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position
INFO 2018-12-21 08:54:57,243Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle
INFO 2018-12-21 08:54:57,253Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position
INFO 2018-12-21 08:54:57,306Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle
INFO 2018-12-21 08:54:57,511Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate
INFO 2018-12-21 08:54:57,888Z lrauvNc4ToNetcdf.py createNav():425 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2018-12-21 08:54:58,262Z lrauvNc4ToNetcdf.py createNav():425 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2018-12-21 08:54:58,637Z lrauvNc4ToNetcdf.py createNav():425 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2018-12-21 08:54:58,638Z lrauvNc4ToNetcdf.py nudge_coords():520 /mbari/LRAUV/whoidhs/missionlogs/2018/20180926_20180927/20180927T150747/201809271507_201809271708.nc4
INFO 2018-12-21 08:54:59,282Z lrauvNc4ToNetcdf.py nudge_coords():528 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s)
INFO 2018-12-21 08:54:59,284Z lrauvNc4ToNetcdf.py nudge_coords():544                  -            -            -         3    0.01              -              -
WARNING 2018-12-21 08:54:59,285Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.342596054) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:54:59,287Z lrauvNc4ToNetcdf.py nudge_coords():565    0:        0.343    0.0000370    0.0000482        87    0.69           8.35          12.91
WARNING 2018-12-21 08:54:59,290Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.33376813) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:54:59,291Z lrauvNc4ToNetcdf.py nudge_coords():565    1:        0.334    0.0007017    0.0004110      1229    9.16           5.38           8.31
WARNING 2018-12-21 08:54:59,294Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.349801779) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:54:59,295Z lrauvNc4ToNetcdf.py nudge_coords():565    2:        0.350    0.0000057    0.0000003         5    0.03           1.19           1.84
WARNING 2018-12-21 08:54:59,298Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.34880495) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:54:59,299Z lrauvNc4ToNetcdf.py nudge_coords():565    3:        0.349    0.0001802    0.0001053       246    2.11           5.98           9.24
WARNING 2018-12-21 08:54:59,301Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.36424613) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:54:59,302Z lrauvNc4ToNetcdf.py nudge_coords():565    4:        0.364    0.0000267    0.0000153        25    0.36           5.06           7.81
WARNING 2018-12-21 08:54:59,305Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.363136053) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:54:59,306Z lrauvNc4ToNetcdf.py nudge_coords():565    5:        0.363    0.0000115    0.0000039         9    0.06           7.56          11.67
WARNING 2018-12-21 08:54:59,309Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.350775957) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:54:59,310Z lrauvNc4ToNetcdf.py nudge_coords():565    6:        0.351    0.0000292    0.0000207        24    0.34           7.39          11.41
WARNING 2018-12-21 08:54:59,312Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.311750889) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:54:59,313Z lrauvNc4ToNetcdf.py nudge_coords():565    7:        0.312    0.0010933    0.0003426      1036    6.91           5.95           9.18
WARNING 2018-12-21 08:54:59,316Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.324219942) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:54:59,317Z lrauvNc4ToNetcdf.py nudge_coords():565    8:        0.324    0.0001695    0.0000605       134    1.01           7.18          11.07
WARNING 2018-12-21 08:54:59,320Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.347851038) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:54:59,321Z lrauvNc4ToNetcdf.py nudge_coords():565    9:        0.348    0.0014514    0.0004347      1935   12.97           4.02           6.21
WARNING 2018-12-21 08:54:59,324Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.347839117) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:54:59,324Z lrauvNc4ToNetcdf.py nudge_coords():565   10:        0.348    0.0001460   -0.0000050       135    1.16          -0.52          -0.80
WARNING 2018-12-21 08:54:59,327Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.353780032) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:54:59,328Z lrauvNc4ToNetcdf.py nudge_coords():565   11:        0.354    0.0012200    0.0006565      1687   11.26           7.00          10.80
WARNING 2018-12-21 08:54:59,331Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.355966091) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:54:59,332Z lrauvNc4ToNetcdf.py nudge_coords():565   12:        0.356    0.0001737    0.0001607       246    1.82          10.59          16.33
WARNING 2018-12-21 08:54:59,335Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.341535091) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:54:59,336Z lrauvNc4ToNetcdf.py nudge_coords():565   13:        0.342    0.0012955    0.0005464      1601   10.74           6.12           9.43
WARNING 2018-12-21 08:54:59,339Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.339614868) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:54:59,340Z lrauvNc4ToNetcdf.py nudge_coords():565   14:        0.340    0.0011973    0.0003630      1302    9.45           4.62           7.11
WARNING 2018-12-21 08:54:59,343Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.354856015) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:54:59,343Z lrauvNc4ToNetcdf.py nudge_coords():565   15:        0.355    0.0006675    0.0002610       925    6.69           4.69           7.23
WARNING 2018-12-21 08:54:59,346Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.357105017) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:54:59,347Z lrauvNc4ToNetcdf.py nudge_coords():565   16:        0.357    0.0007307    0.0002637      1049    7.26           4.37           6.73
WARNING 2018-12-21 08:54:59,350Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.34994483) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:54:59,351Z lrauvNc4ToNetcdf.py nudge_coords():565   17:        0.350    0.0000913    0.0000890       226    1.71           6.25           9.63
WARNING 2018-12-21 08:54:59,354Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.34675312) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:54:59,355Z lrauvNc4ToNetcdf.py nudge_coords():565   18:        0.347    0.0006373    0.0007647      4164   28.32           3.27           5.00
WARNING 2018-12-21 08:54:59,358Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.37578082) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:54:59,359Z lrauvNc4ToNetcdf.py nudge_coords():565   19:        0.376    0.0000360    0.0000110        24    0.37           3.60           5.50
INFO 2018-12-21 08:54:59,362Z lrauvNc4ToNetcdf.py nudge_coords():589   21:            -            -            -      1116    7.72              -              -
INFO 2018-12-21 08:54:59,362Z lrauvNc4ToNetcdf.py nudge_coords():593 Points in final series = 17205
INFO 2018-12-21 08:54:59,408Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():466 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20180927T140747/20180927T180807/data.csv
INFO 2018-12-21 08:54:59,435Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():489 Found 0 position values from the Tracking database
INFO 2018-12-21 08:54:59,439Z lrauvNc4ToNetcdf.py processResampleNc4File():981 ['fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'oxygen', 'salinity', 'temperature', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time']
INFO 2018-12-21 08:55:00,016Z lrauvNc4ToNetcdf.py processResampleNc4File():984 Wrote /mbari/LRAUV/whoidhs/missionlogs/2018/20180926_20180927/20180927T150747/201809271507_201809271708_2S_scieng.nc