INFO 2018-12-21 08:55:00,022Z lrauvNc4ToNetcdf.py processResampleNc4File():855 Reading /mbari/LRAUV/whoidhs/missionlogs/2018/20180926_20180927/20180927T170807/201809271708_201809271912.nc4 file...
INFO 2018-12-21 08:55:06,927Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources
INFO 2018-12-21 08:55:07,286Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources
INFO 2018-12-21 08:55:07,647Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources
INFO 2018-12-21 08:55:08,008Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources
INFO 2018-12-21 08:55:08,012Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group DeadReckonUsingSpeedCalculator parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator
INFO 2018-12-21 08:55:08,371Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group DeadReckonUsingSpeedCalculator parameter longitude renaming to pose_longitude_DeadReckonUsingSpeedCalculator
INFO 2018-12-21 08:55:08,730Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group DeadReckonUsingSpeedCalculator parameter latitude renaming to pose_latitude_DeadReckonUsingSpeedCalculator
INFO 2018-12-21 08:55:09,088Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group DeadReckonUsingSpeedCalculator parameter depth renaming to pose_depth_DeadReckonUsingSpeedCalculator
INFO 2018-12-21 08:55:09,161Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group Aanderaa_O2 parameter mass_concentration_of_oxygen_in_sea_water renaming to oxygen
INFO 2018-12-21 08:55:09,516Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group CTD_NeilBrown parameter sea_water_salinity renaming to salinity
INFO 2018-12-21 08:55:09,871Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group CTD_NeilBrown parameter sea_water_temperature renaming to temperature
WARNING 2018-12-21 08:55:09,871Z lrauvNc4ToNetcdf.py processResampleNc4File():937 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180926_20180927/20180927T170807/201809271708_201809271912.nc4
WARNING 2018-12-21 08:55:09,872Z lrauvNc4ToNetcdf.py processResampleNc4File():937 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180926_20180927/20180927T170807/201809271708_201809271912.nc4
WARNING 2018-12-21 08:55:09,872Z lrauvNc4ToNetcdf.py processResampleNc4File():937 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180926_20180927/20180927T170807/201809271708_201809271912.nc4
WARNING 2018-12-21 08:55:09,872Z lrauvNc4ToNetcdf.py processResampleNc4File():937 'downwelling_photosynthetic_photon_flux_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180926_20180927/20180927T170807/201809271708_201809271912.nc4
WARNING 2018-12-21 08:55:09,872Z lrauvNc4ToNetcdf.py processResampleNc4File():937 'mass_concentration_of_chlorophyll_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180926_20180927/20180927T170807/201809271708_201809271912.nc4
WARNING 2018-12-21 08:55:09,872Z lrauvNc4ToNetcdf.py processResampleNc4File():937 'Output470' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180926_20180927/20180927T170807/201809271708_201809271912.nc4
WARNING 2018-12-21 08:55:09,872Z lrauvNc4ToNetcdf.py processResampleNc4File():937 'Output650' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180926_20180927/20180927T170807/201809271708_201809271912.nc4
INFO 2018-12-21 08:55:09,905Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge
INFO 2018-12-21 08:55:09,937Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage
INFO 2018-12-21 08:55:09,941Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group NAL9602 parameter time_fix renaming to fix_time
INFO 2018-12-21 08:55:09,946Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude
INFO 2018-12-21 08:55:09,950Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude
WARNING 2018-12-21 08:55:09,950Z lrauvNc4ToNetcdf.py processResampleNc4File():937 'platform_average_current' not in /mbari/LRAUV/whoidhs/missionlogs/2018/20180926_20180927/20180927T170807/201809271708_201809271912.nc4
INFO 2018-12-21 08:55:10,026Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position
INFO 2018-12-21 08:55:10,115Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle
INFO 2018-12-21 08:55:10,122Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position
INFO 2018-12-21 08:55:10,185Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle
INFO 2018-12-21 08:55:10,374Z lrauvNc4ToNetcdf.py processResampleNc4File():935 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate
INFO 2018-12-21 08:55:10,756Z lrauvNc4ToNetcdf.py createNav():425 platform_pitch_angle -> pitch: {'units': 'n/a', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2018-12-21 08:55:11,139Z lrauvNc4ToNetcdf.py createNav():425 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2018-12-21 08:55:11,522Z lrauvNc4ToNetcdf.py createNav():425 platform_orientation -> yaw: {'units': 'n/a', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2018-12-21 08:55:11,524Z lrauvNc4ToNetcdf.py nudge_coords():520 /mbari/LRAUV/whoidhs/missionlogs/2018/20180926_20180927/20180927T170807/201809271708_201809271912.nc4
INFO 2018-12-21 08:55:12,170Z lrauvNc4ToNetcdf.py nudge_coords():528 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s)
INFO 2018-12-21 08:55:12,172Z lrauvNc4ToNetcdf.py nudge_coords():544                  -            -            -         3    0.01              -              -
WARNING 2018-12-21 08:55:12,173Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.37541914) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:55:12,175Z lrauvNc4ToNetcdf.py nudge_coords():565    0:        0.375    0.0006358    0.0001103       951    6.91           1.94           2.96
WARNING 2018-12-21 08:55:12,178Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.493158102) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:55:12,179Z lrauvNc4ToNetcdf.py nudge_coords():565    1:        0.493    0.0004658    0.0000177       832    6.47           0.33           0.51
WARNING 2018-12-21 08:55:12,182Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.38269496) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:55:12,182Z lrauvNc4ToNetcdf.py nudge_coords():565    2:        0.383    0.0001078    0.0000013       150    1.39           0.12           0.18
WARNING 2018-12-21 08:55:12,185Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.360820055) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:55:12,186Z lrauvNc4ToNetcdf.py nudge_coords():565    3:        0.361    0.0000092   -0.0000001         9    0.06          -0.18          -0.27
WARNING 2018-12-21 08:55:12,189Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.340525866) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:55:12,190Z lrauvNc4ToNetcdf.py nudge_coords():565    4:        0.341    0.0000252   -0.0000017        25    0.36          -0.57          -0.87
WARNING 2018-12-21 08:55:12,193Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.335394859) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:55:12,194Z lrauvNc4ToNetcdf.py nudge_coords():565    5:        0.335   -0.0000503    0.0001661       957    6.58           3.07           4.68
WARNING 2018-12-21 08:55:12,197Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.362268925) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:55:12,197Z lrauvNc4ToNetcdf.py nudge_coords():565    6:        0.362    0.0001762    0.0000728       500    3.70           2.39           3.65
WARNING 2018-12-21 08:55:12,200Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.346661806) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:55:12,201Z lrauvNc4ToNetcdf.py nudge_coords():565    7:        0.347    0.0007078    0.0008277      3347   22.34           4.50           6.87
WARNING 2018-12-21 08:55:12,204Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.356108904) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:55:12,205Z lrauvNc4ToNetcdf.py nudge_coords():565    8:        0.356    0.0000987    0.0000297       261    1.95           1.85           2.82
WARNING 2018-12-21 08:55:12,208Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.369239091) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:55:12,209Z lrauvNc4ToNetcdf.py nudge_coords():565    9:        0.369    0.0001577   -0.0000023       532    3.55          -0.08          -0.12
WARNING 2018-12-21 08:55:12,212Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.349414111) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:55:12,212Z lrauvNc4ToNetcdf.py nudge_coords():565   10:        0.349    0.0000467    0.0000285       136    1.00           3.48           5.30
WARNING 2018-12-21 08:55:12,215Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.359142065) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:55:12,216Z lrauvNc4ToNetcdf.py nudge_coords():565   11:        0.359    0.0007044   -0.0002389      1030    6.88          -4.23          -6.43
WARNING 2018-12-21 08:55:12,219Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.360150098) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:55:12,220Z lrauvNc4ToNetcdf.py nudge_coords():565   12:        0.360    0.0001147   -0.0000282       160    1.22          -2.82          -4.28
WARNING 2018-12-21 08:55:12,223Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.36321497) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:55:12,224Z lrauvNc4ToNetcdf.py nudge_coords():565   13:        0.363    0.0001194   -0.0001301       489    3.27          -4.84          -7.36
WARNING 2018-12-21 08:55:12,227Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.340633869) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:55:12,227Z lrauvNc4ToNetcdf.py nudge_coords():565   14:        0.341    0.0001578   -0.0000553       147    1.10          -6.12          -9.32
WARNING 2018-12-21 08:55:12,230Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.363103151) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:55:12,231Z lrauvNc4ToNetcdf.py nudge_coords():565   15:        0.363   -0.0000219    0.0001928       523    3.50           6.71          10.20
WARNING 2018-12-21 08:55:12,234Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.357994079) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:55:12,235Z lrauvNc4ToNetcdf.py nudge_coords():565   16:        0.358    0.0000450    0.0000277       183    1.37           2.46           3.74
WARNING 2018-12-21 08:55:12,238Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.363229036) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:55:12,238Z lrauvNc4ToNetcdf.py nudge_coords():565   17:        0.363    0.0001466    0.0001404       531    3.65           4.68           7.12
WARNING 2018-12-21 08:55:12,241Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.359049082) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:55:12,242Z lrauvNc4ToNetcdf.py nudge_coords():565   18:        0.359    0.0000132    0.0000080       125    0.96           1.02           1.55
WARNING 2018-12-21 08:55:12,245Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.352906942) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:55:12,246Z lrauvNc4ToNetcdf.py nudge_coords():565   19:        0.353   -0.0000146   -0.0001631       584    3.90          -5.10          -7.76
WARNING 2018-12-21 08:55:12,249Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.360063077) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:55:12,250Z lrauvNc4ToNetcdf.py nudge_coords():565   20:        0.360    0.0000417    0.0000065       130    0.99           0.80           1.22
WARNING 2018-12-21 08:55:12,253Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.367078066) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:55:12,253Z lrauvNc4ToNetcdf.py nudge_coords():565   21:        0.367   -0.0000282   -0.0002264       841    5.61          -4.92          -7.48
WARNING 2018-12-21 08:55:12,256Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.34164381) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:55:12,257Z lrauvNc4ToNetcdf.py nudge_coords():565   22:        0.342    0.0000557    0.0000187       207    1.54           1.48           2.25
WARNING 2018-12-21 08:55:12,260Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.337694169) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:55:12,261Z lrauvNc4ToNetcdf.py nudge_coords():565   23:        0.338    0.0004728    0.0001160       784    5.23           2.70           4.11
WARNING 2018-12-21 08:55:12,264Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.344670058) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:55:12,265Z lrauvNc4ToNetcdf.py nudge_coords():565   24:        0.345    0.0000500    0.0000157       148    1.11           1.72           2.62
WARNING 2018-12-21 08:55:12,268Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.298613072) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:55:12,268Z lrauvNc4ToNetcdf.py nudge_coords():565   25:        0.299    0.0010985   -0.0001562      1530   10.34          -1.84          -2.80
WARNING 2018-12-21 08:55:12,271Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.335391998) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:55:12,272Z lrauvNc4ToNetcdf.py nudge_coords():565   26:        0.335    0.0000573   -0.0000125        58    0.53          -2.86          -4.36
WARNING 2018-12-21 08:55:12,275Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.322169066) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:55:12,276Z lrauvNc4ToNetcdf.py nudge_coords():565   27:        0.322   -0.0002131   -0.0000118       681    4.68          -0.31          -0.47
WARNING 2018-12-21 08:55:12,279Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.345737934) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:55:12,280Z lrauvNc4ToNetcdf.py nudge_coords():565   28:        0.346    0.0000303    0.0000035        49    0.46           0.93           1.41
WARNING 2018-12-21 08:55:12,283Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.356060982) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:55:12,283Z lrauvNc4ToNetcdf.py nudge_coords():565   29:        0.356   -0.0000029   -0.0000037       790    5.39          -0.08          -0.13
WARNING 2018-12-21 08:55:12,286Z lrauvNc4ToNetcdf.py nudge_coords():553 end_sec_diff (0.352971077) < max_sec_diff_at_end (10)
INFO 2018-12-21 08:55:12,287Z lrauvNc4ToNetcdf.py nudge_coords():565   30:        0.353    0.0001492   -0.0000248       291    2.22          -1.36          -2.07
INFO 2018-12-21 08:55:12,290Z lrauvNc4ToNetcdf.py nudge_coords():589   32:            -            -            -       869    6.35              -              -
INFO 2018-12-21 08:55:12,291Z lrauvNc4ToNetcdf.py nudge_coords():593 Points in final series = 17850
INFO 2018-12-21 08:55:12,333Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():466 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20180927T160807/20180927T201257/data.csv
INFO 2018-12-21 08:55:12,358Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():489 Found 0 position values from the Tracking database
INFO 2018-12-21 08:55:12,361Z lrauvNc4ToNetcdf.py processResampleNc4File():981 ['fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'fix_residual_percent_distance_traveled_DeadReckonUsingSpeedCalculator', 'pose_longitude_DeadReckonUsingSpeedCalculator', 'pose_latitude_DeadReckonUsingSpeedCalculator', 'pose_depth_DeadReckonUsingSpeedCalculator', 'oxygen', 'salinity', 'temperature', 'health_platform_battery_charge', 'health_platform_average_voltage', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time']
INFO 2018-12-21 08:55:12,928Z lrauvNc4ToNetcdf.py processResampleNc4File():984 Wrote /mbari/LRAUV/whoidhs/missionlogs/2018/20180926_20180927/20180927T170807/201809271708_201809271912_2S_scieng.nc