INFO 2019-06-11 02:37:54,462Z lrauvNc4ToNetcdf.py processResampleNc4File():930 Reading /mbari/LRAUV/whoidhs/missionlogs/2019/20190403_20190405/20190404T033102/201904040331_201904040629.nc4 file...
INFO 2019-06-11 02:37:54,463Z lrauvNc4ToNetcdf.py processResampleNc4File():931 After copying to /tmp/201904040331_201904040629.nc4
INFO 2019-06-11 02:37:55,361Z lrauvNc4ToNetcdf.py processResampleNc4File():933 Read file /mbari/LRAUV/whoidhs/missionlogs/2019/20190403_20190405/20190404T033102/201904040331_201904040629.nc4
INFO 2019-06-11 02:38:04,004Z lrauvNc4ToNetcdf.py processResampleNc4File():938 Creating t variable of the time indexes
WARNING 2019-06-11 02:38:04,014Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190403_20190405/20190404T033102/201904040331_201904040629.nc4
INFO 2019-06-11 02:38:04,100Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position
INFO 2019-06-11 02:38:04,101Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable sea_water_salinity empty so skipping
INFO 2019-06-11 02:38:04,102Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable sea_water_temperature empty so skipping
WARNING 2019-06-11 02:38:04,103Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190403_20190405/20190404T033102/201904040331_201904040629.nc4
WARNING 2019-06-11 02:38:04,103Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190403_20190405/20190404T033102/201904040331_201904040629.nc4
INFO 2019-06-11 02:38:04,134Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle
WARNING 2019-06-11 02:38:04,134Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190403_20190405/20190404T033102/201904040331_201904040629.nc4
INFO 2019-06-11 02:38:04,147Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position
INFO 2019-06-11 02:38:04,151Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group NAL9602 parameter time_fix renaming to fix_time
INFO 2019-06-11 02:38:04,155Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude
INFO 2019-06-11 02:38:04,159Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude
WARNING 2019-06-11 02:38:04,159Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'downwelling_photosynthetic_photon_flux_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190403_20190405/20190404T033102/201904040331_201904040629.nc4
INFO 2019-06-11 02:38:04,245Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle
INFO 2019-06-11 02:38:04,557Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate
WARNING 2019-06-11 02:38:04,557Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mass_concentration_of_chlorophyll_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190403_20190405/20190404T033102/201904040331_201904040629.nc4
WARNING 2019-06-11 02:38:04,558Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'Output470' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190403_20190405/20190404T033102/201904040331_201904040629.nc4
WARNING 2019-06-11 02:38:04,558Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'Output650' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190403_20190405/20190404T033102/201904040331_201904040629.nc4
INFO 2019-06-11 02:38:04,559Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable concentration_of_chromophoric_dissolved_organic_matter_in_sea_water empty so skipping
INFO 2019-06-11 02:38:04,560Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping
INFO 2019-06-11 02:38:04,562Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable BackscatteringCoeff700nm empty so skipping
INFO 2019-06-11 02:38:04,563Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable VolumeScatCoeff117deg700nm empty so skipping
INFO 2019-06-11 02:38:04,564Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable mass_concentration_of_petroleum_hydrocarbons_in_sea_water empty so skipping
INFO 2019-06-11 02:38:04,568Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources
INFO 2019-06-11 02:38:05,114Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-06-11 02:38:05,661Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-06-11 02:38:06,205Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources
WARNING 2019-06-11 02:38:06,205Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'fix_residual_percent_distance_traveled' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190403_20190405/20190404T033102/201904040331_201904040629.nc4
WARNING 2019-06-11 02:38:06,205Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'longitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190403_20190405/20190404T033102/201904040331_201904040629.nc4
WARNING 2019-06-11 02:38:06,206Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'latitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190403_20190405/20190404T033102/201904040331_201904040629.nc4
WARNING 2019-06-11 02:38:06,206Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'depth' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190403_20190405/20190404T033102/201904040331_201904040629.nc4
INFO 2019-06-11 02:38:06,213Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge
INFO 2019-06-11 02:38:06,218Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage
WARNING 2019-06-11 02:38:06,218Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'platform_average_current' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190403_20190405/20190404T033102/201904040331_201904040629.nc4
INFO 2019-06-11 02:38:06,758Z lrauvNc4ToNetcdf.py createNav():458 platform_pitch_angle -> pitch: {'units': 'rad', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-06-11 02:38:07,298Z lrauvNc4ToNetcdf.py createNav():458 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-06-11 02:38:07,840Z lrauvNc4ToNetcdf.py createNav():458 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-06-11 02:38:07,841Z lrauvNc4ToNetcdf.py nudge_coords():575 /mbari/LRAUV/whoidhs/missionlogs/2019/20190403_20190405/20190404T033102/201904040331_201904040629.nc4
INFO 2019-06-11 02:38:08,602Z lrauvNc4ToNetcdf.py nudge_coords():593 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s)
INFO 2019-06-11 02:38:08,604Z lrauvNc4ToNetcdf.py nudge_coords():609                  -            -            -       283    1.90              -              -
INFO 2019-06-11 02:38:08,609Z lrauvNc4ToNetcdf.py nudge_coords():631    0:        0.365   -0.0000527   -0.0000844       199    1.33          -6.98         -11.73
INFO 2019-06-11 02:38:08,616Z lrauvNc4ToNetcdf.py nudge_coords():631    1:        0.359   -0.0012784   -0.0020032      4905   33.03          -6.71         -11.24
INFO 2019-06-11 02:38:08,622Z lrauvNc4ToNetcdf.py nudge_coords():631    2:        0.357   -0.0001897   -0.0001991       350    2.55          -8.63         -14.46
INFO 2019-06-11 02:38:08,628Z lrauvNc4ToNetcdf.py nudge_coords():631    3:        0.362   -0.0008435   -0.0015683      4822   32.48          -5.34          -8.95
INFO 2019-06-11 02:38:08,635Z lrauvNc4ToNetcdf.py nudge_coords():631    4:        0.360    0.0000067   -0.0000337       119    0.82          -4.52          -7.57
INFO 2019-06-11 02:38:08,640Z lrauvNc4ToNetcdf.py nudge_coords():631    5:        0.346   -0.0001073   -0.0001708       361    2.65          -7.12         -11.93
INFO 2019-06-11 02:38:08,646Z lrauvNc4ToNetcdf.py nudge_coords():631    6:        0.361    0.0001308   -0.0008147       935    6.30         -14.29         -23.96
INFO 2019-06-11 02:38:08,652Z lrauvNc4ToNetcdf.py nudge_coords():631    7:        0.386    0.0000070   -0.0000185        75    0.56          -3.68          -6.17
INFO 2019-06-11 02:38:08,658Z lrauvNc4ToNetcdf.py nudge_coords():631    8:        0.365   -0.0014151   -0.0036592      7238   48.76          -8.25         -13.91
INFO 2019-06-11 02:38:08,665Z lrauvNc4ToNetcdf.py nudge_coords():631    9:        0.371   -0.0000685   -0.0000860        83    0.61         -15.50         -26.13
INFO 2019-06-11 02:38:08,671Z lrauvNc4ToNetcdf.py nudge_coords():661   11:            -            -            -      7051   47.48              -              -
INFO 2019-06-11 02:38:08,671Z lrauvNc4ToNetcdf.py nudge_coords():665 Points in final series = 26421
INFO 2019-06-11 02:38:08,686Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():499 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20190404T023102/20190404T072936/data.csv
INFO 2019-06-11 02:38:08,706Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():522 Found 0 position values from the Tracking database
INFO 2019-06-11 02:38:08,711Z lrauvNc4ToNetcdf.py processResampleNc4File():1066 ['control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_battery_charge', 'health_platform_average_voltage', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time']
INFO 2019-06-11 02:38:09,241Z lrauvNc4ToNetcdf.py processResampleNc4File():1069 Wrote /mbari/LRAUV/whoidhs/missionlogs/2019/20190403_20190405/20190404T033102/201904040331_201904040629_2S_scieng.nc