INFO 2019-06-11 03:02:00,047Z lrauvNc4ToNetcdf.py processResampleNc4File():930 Reading /mbari/LRAUV/whoidhs/missionlogs/2019/20190508_20190510/20190509T164932/201905091649_201905091722.nc4 file...
INFO 2019-06-11 03:02:00,048Z lrauvNc4ToNetcdf.py processResampleNc4File():931 After copying to /tmp/201905091649_201905091722.nc4
INFO 2019-06-11 03:02:01,114Z lrauvNc4ToNetcdf.py processResampleNc4File():933 Read file /mbari/LRAUV/whoidhs/missionlogs/2019/20190508_20190510/20190509T164932/201905091649_201905091722.nc4
INFO 2019-06-11 03:02:03,119Z lrauvNc4ToNetcdf.py processResampleNc4File():938 Creating t variable of the time indexes
WARNING 2019-06-11 03:02:03,126Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190508_20190510/20190509T164932/201905091649_201905091722.nc4
INFO 2019-06-11 03:02:03,297Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group CTD_NeilBrown parameter sea_water_salinity renaming to salinity
INFO 2019-06-11 03:02:03,469Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group CTD_NeilBrown parameter sea_water_temperature renaming to temperature
WARNING 2019-06-11 03:02:03,470Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190508_20190510/20190509T164932/201905091649_201905091722.nc4
WARNING 2019-06-11 03:02:03,470Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190508_20190510/20190509T164932/201905091649_201905091722.nc4
WARNING 2019-06-11 03:02:03,470Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190508_20190510/20190509T164932/201905091649_201905091722.nc4
WARNING 2019-06-11 03:02:03,470Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'downwelling_photosynthetic_photon_flux_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190508_20190510/20190509T164932/201905091649_201905091722.nc4
WARNING 2019-06-11 03:02:03,470Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mass_concentration_of_chlorophyll_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190508_20190510/20190509T164932/201905091649_201905091722.nc4
WARNING 2019-06-11 03:02:03,471Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'Output470' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190508_20190510/20190509T164932/201905091649_201905091722.nc4
WARNING 2019-06-11 03:02:03,471Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'Output650' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190508_20190510/20190509T164932/201905091649_201905091722.nc4
INFO 2019-06-11 03:02:03,508Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter concentration_of_chromophoric_dissolved_organic_matter_in_sea_water renaming to chromophoric_dissolved_organic_matter
INFO 2019-06-11 03:02:03,546Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll
INFO 2019-06-11 03:02:03,547Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable BackscatteringCoeff700nm empty so skipping
INFO 2019-06-11 03:02:03,584Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter VolumeScatCoeff117deg700nm renaming to VolumeScatCoeff117deg700nm
INFO 2019-06-11 03:02:03,622Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_petroleum_hydrocarbons_in_sea_water renaming to petroleum_hydrocarbons
INFO 2019-06-11 03:02:03,623Z lrauvNc4ToNetcdf.py nudge_coords():575 /mbari/LRAUV/whoidhs/missionlogs/2019/20190508_20190510/20190509T164932/201905091649_201905091722.nc4
INFO 2019-06-11 03:02:03,919Z lrauvNc4ToNetcdf.py nudge_coords():593 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s)
INFO 2019-06-11 03:02:03,921Z lrauvNc4ToNetcdf.py nudge_coords():609                  -            -            -       342    2.31              -              -
INFO 2019-06-11 03:02:03,923Z lrauvNc4ToNetcdf.py nudge_coords():631    0:        0.369    0.0001312   -0.0000873       651    4.39          -2.33          -3.68
INFO 2019-06-11 03:02:03,929Z lrauvNc4ToNetcdf.py nudge_coords():631    1:        0.355    0.0012922   -0.0004688      3658   24.65          -2.23          -3.52
INFO 2019-06-11 03:02:03,936Z lrauvNc4ToNetcdf.py nudge_coords():661    3:            -            -            -       172    1.29              -              -
INFO 2019-06-11 03:02:03,936Z lrauvNc4ToNetcdf.py nudge_coords():665 Points in final series = 4823
INFO 2019-06-11 03:02:03,953Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():499 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20190509T154932/20190509T182209/data.csv
INFO 2019-06-11 03:02:03,979Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():522 Found 0 position values from the Tracking database
INFO 2019-06-11 03:02:03,986Z lrauvNc4ToNetcdf.py processResampleNc4File():1066 ['salinity', 'temperature', 'chromophoric_dissolved_organic_matter', 'chlorophyll', 'VolumeScatCoeff117deg700nm', 'petroleum_hydrocarbons', 'latitude', 'longitude', 'depth', 'time']
INFO 2019-06-11 03:02:04,362Z lrauvNc4ToNetcdf.py processResampleNc4File():1069 Wrote /mbari/LRAUV/whoidhs/missionlogs/2019/20190508_20190510/20190509T164932/201905091649_201905091722_10S_sci.nc