INFO 2019-06-11 02:41:34,736Z lrauvNc4ToNetcdf.py processResampleNc4File():930 Reading /mbari/LRAUV/whoidhs/missionlogs/2019/20190508_20190510/20190509T172214/201905091722_201905091848.nc4 file... INFO 2019-06-11 02:41:34,737Z lrauvNc4ToNetcdf.py processResampleNc4File():931 After copying to /tmp/201905091722_201905091848.nc4 INFO 2019-06-11 02:41:35,636Z lrauvNc4ToNetcdf.py processResampleNc4File():933 Read file /mbari/LRAUV/whoidhs/missionlogs/2019/20190508_20190510/20190509T172214/201905091722_201905091848.nc4 INFO 2019-06-11 02:41:39,819Z lrauvNc4ToNetcdf.py processResampleNc4File():938 Creating t variable of the time indexes WARNING 2019-06-11 02:41:39,826Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190508_20190510/20190509T172214/201905091722_201905091848.nc4 INFO 2019-06-11 02:41:39,844Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2019-06-11 02:41:39,846Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable sea_water_salinity empty so skipping INFO 2019-06-11 02:41:39,847Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable sea_water_temperature empty so skipping WARNING 2019-06-11 02:41:39,847Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190508_20190510/20190509T172214/201905091722_201905091848.nc4 WARNING 2019-06-11 02:41:39,847Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190508_20190510/20190509T172214/201905091722_201905091848.nc4 INFO 2019-06-11 02:41:39,864Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle WARNING 2019-06-11 02:41:39,864Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190508_20190510/20190509T172214/201905091722_201905091848.nc4 INFO 2019-06-11 02:41:39,874Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2019-06-11 02:41:39,879Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2019-06-11 02:41:39,883Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2019-06-11 02:41:39,887Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude WARNING 2019-06-11 02:41:39,887Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'downwelling_photosynthetic_photon_flux_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190508_20190510/20190509T172214/201905091722_201905091848.nc4 INFO 2019-06-11 02:41:39,909Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2019-06-11 02:41:40,096Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate WARNING 2019-06-11 02:41:40,096Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mass_concentration_of_chlorophyll_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190508_20190510/20190509T172214/201905091722_201905091848.nc4 WARNING 2019-06-11 02:41:40,096Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'Output470' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190508_20190510/20190509T172214/201905091722_201905091848.nc4 WARNING 2019-06-11 02:41:40,096Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'Output650' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190508_20190510/20190509T172214/201905091722_201905091848.nc4 INFO 2019-06-11 02:41:40,102Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter concentration_of_chromophoric_dissolved_organic_matter_in_sea_water renaming to chromophoric_dissolved_organic_matter INFO 2019-06-11 02:41:40,107Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2019-06-11 02:41:40,109Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable BackscatteringCoeff700nm empty so skipping INFO 2019-06-11 02:41:40,112Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter VolumeScatCoeff117deg700nm renaming to VolumeScatCoeff117deg700nm INFO 2019-06-11 02:41:40,116Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_petroleum_hydrocarbons_in_sea_water renaming to petroleum_hydrocarbons INFO 2019-06-11 02:41:40,120Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2019-06-11 02:41:40,377Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2019-06-11 02:41:40,636Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2019-06-11 02:41:40,894Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources WARNING 2019-06-11 02:41:40,894Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'fix_residual_percent_distance_traveled' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190508_20190510/20190509T172214/201905091722_201905091848.nc4 WARNING 2019-06-11 02:41:40,895Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'longitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190508_20190510/20190509T172214/201905091722_201905091848.nc4 WARNING 2019-06-11 02:41:40,895Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'latitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190508_20190510/20190509T172214/201905091722_201905091848.nc4 WARNING 2019-06-11 02:41:40,895Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'depth' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190508_20190510/20190509T172214/201905091722_201905091848.nc4 INFO 2019-06-11 02:41:40,901Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2019-06-11 02:41:40,906Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage WARNING 2019-06-11 02:41:40,906Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'platform_average_current' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190508_20190510/20190509T172214/201905091722_201905091848.nc4 INFO 2019-06-11 02:41:41,179Z lrauvNc4ToNetcdf.py createNav():458 platform_pitch_angle -> pitch: {'units': 'rad', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-06-11 02:41:41,446Z lrauvNc4ToNetcdf.py createNav():458 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-06-11 02:41:41,714Z lrauvNc4ToNetcdf.py createNav():458 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-06-11 02:41:41,715Z lrauvNc4ToNetcdf.py nudge_coords():575 /mbari/LRAUV/whoidhs/missionlogs/2019/20190508_20190510/20190509T172214/201905091722_201905091848.nc4 INFO 2019-06-11 02:41:42,141Z lrauvNc4ToNetcdf.py nudge_coords():593 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) INFO 2019-06-11 02:41:42,142Z lrauvNc4ToNetcdf.py nudge_coords():609 - - - 0 0.00 - - INFO 2019-06-11 02:41:42,145Z lrauvNc4ToNetcdf.py nudge_coords():631 0: 0.369 0.0000333 -0.0000363 165 1.27 -3.35 -5.30 INFO 2019-06-11 02:41:42,150Z lrauvNc4ToNetcdf.py nudge_coords():631 1: 0.358 0.0000390 -0.0000208 252 1.70 -1.44 -2.28 INFO 2019-06-11 02:41:42,156Z lrauvNc4ToNetcdf.py nudge_coords():631 2: 0.362 0.0000280 -0.0000118 173 1.16 -1.20 -1.89 INFO 2019-06-11 02:41:42,162Z lrauvNc4ToNetcdf.py nudge_coords():631 3: 0.366 0.0023521 0.0001743 4104 27.64 0.74 1.17 INFO 2019-06-11 02:41:42,168Z lrauvNc4ToNetcdf.py nudge_coords():631 4: 0.345 -0.0000063 -0.0000930 395 3.03 -3.58 -5.69 INFO 2019-06-11 02:41:42,174Z lrauvNc4ToNetcdf.py nudge_coords():631 5: 0.354 0.0000135 0.0000007 44 0.29 0.27 0.43 INFO 2019-06-11 02:41:42,180Z lrauvNc4ToNetcdf.py nudge_coords():631 6: 0.363 0.0001422 -0.0000625 811 5.46 -1.34 -2.12 INFO 2019-06-11 02:41:42,186Z lrauvNc4ToNetcdf.py nudge_coords():631 7: 0.347 0.0000258 -0.0000145 191 1.28 -1.32 -2.10 INFO 2019-06-11 02:41:42,192Z lrauvNc4ToNetcdf.py nudge_coords():631 8: 0.369 0.0000230 -0.0000257 224 1.50 -1.99 -3.16 INFO 2019-06-11 02:41:42,198Z lrauvNc4ToNetcdf.py nudge_coords():631 9: 0.352 0.0023563 0.0004272 5357 36.08 1.38 2.19 INFO 2019-06-11 02:41:42,204Z lrauvNc4ToNetcdf.py nudge_coords():631 10: 0.358 0.0000396 0.0000173 60 0.41 4.97 7.89 INFO 2019-06-11 02:41:42,210Z lrauvNc4ToNetcdf.py nudge_coords():631 11: 0.350 -0.0000092 -0.0000140 44 0.29 -5.65 -8.97 INFO 2019-06-11 02:41:42,215Z lrauvNc4ToNetcdf.py nudge_coords():661 13: - - - 547 3.68 - - INFO 2019-06-11 02:41:42,215Z lrauvNc4ToNetcdf.py nudge_coords():665 Points in final series = 12367 INFO 2019-06-11 02:41:42,230Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():499 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20190509T162225/20190509T194824/data.csv INFO 2019-06-11 02:41:42,264Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():522 Found 0 position values from the Tracking database INFO 2019-06-11 02:41:42,269Z lrauvNc4ToNetcdf.py processResampleNc4File():1066 ['control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'chromophoric_dissolved_organic_matter', 'chlorophyll', 'VolumeScatCoeff117deg700nm', 'petroleum_hydrocarbons', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_battery_charge', 'health_platform_average_voltage', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2019-06-11 02:41:42,887Z lrauvNc4ToNetcdf.py processResampleNc4File():1069 Wrote /mbari/LRAUV/whoidhs/missionlogs/2019/20190508_20190510/20190509T172214/201905091722_201905091848_2S_scieng.nc