INFO 2019-06-11 02:43:59,997Z lrauvNc4ToNetcdf.py processResampleNc4File():930 Reading /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190523T164559/201905231645_201905232159.nc4 file... INFO 2019-06-11 02:43:59,997Z lrauvNc4ToNetcdf.py processResampleNc4File():931 After copying to /tmp/201905231645_201905232159.nc4 INFO 2019-06-11 02:44:01,311Z lrauvNc4ToNetcdf.py processResampleNc4File():933 Read file /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190523T164559/201905231645_201905232159.nc4 INFO 2019-06-11 02:44:16,417Z lrauvNc4ToNetcdf.py processResampleNc4File():938 Creating t variable of the time indexes WARNING 2019-06-11 02:44:16,429Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190523T164559/201905231645_201905232159.nc4 INFO 2019-06-11 02:44:16,629Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2019-06-11 02:44:16,817Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group CTD_NeilBrown parameter sea_water_salinity renaming to salinity INFO 2019-06-11 02:44:17,007Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group CTD_NeilBrown parameter sea_water_temperature renaming to temperature WARNING 2019-06-11 02:44:17,007Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190523T164559/201905231645_201905232159.nc4 WARNING 2019-06-11 02:44:17,007Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190523T164559/201905231645_201905232159.nc4 INFO 2019-06-11 02:44:17,093Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle WARNING 2019-06-11 02:44:17,093Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190523T164559/201905231645_201905232159.nc4 INFO 2019-06-11 02:44:17,115Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2019-06-11 02:44:17,120Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2019-06-11 02:44:17,125Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2019-06-11 02:44:17,130Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude WARNING 2019-06-11 02:44:17,130Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'downwelling_photosynthetic_photon_flux_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190523T164559/201905231645_201905232159.nc4 INFO 2019-06-11 02:44:17,233Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2019-06-11 02:44:17,833Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate WARNING 2019-06-11 02:44:17,833Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mass_concentration_of_chlorophyll_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190523T164559/201905231645_201905232159.nc4 WARNING 2019-06-11 02:44:17,833Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'Output470' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190523T164559/201905231645_201905232159.nc4 WARNING 2019-06-11 02:44:17,833Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'Output650' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190523T164559/201905231645_201905232159.nc4 INFO 2019-06-11 02:44:17,875Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter concentration_of_chromophoric_dissolved_organic_matter_in_sea_water renaming to chromophoric_dissolved_organic_matter INFO 2019-06-11 02:44:17,916Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2019-06-11 02:44:17,918Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable BackscatteringCoeff700nm empty so skipping INFO 2019-06-11 02:44:17,960Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter VolumeScatCoeff117deg700nm renaming to VolumeScatCoeff117deg700nm INFO 2019-06-11 02:44:18,001Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_petroleum_hydrocarbons_in_sea_water renaming to petroleum_hydrocarbons INFO 2019-06-11 02:44:18,006Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2019-06-11 02:44:18,947Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2019-06-11 02:44:19,895Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2019-06-11 02:44:20,847Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources WARNING 2019-06-11 02:44:20,847Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'fix_residual_percent_distance_traveled' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190523T164559/201905231645_201905232159.nc4 WARNING 2019-06-11 02:44:20,847Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'longitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190523T164559/201905231645_201905232159.nc4 WARNING 2019-06-11 02:44:20,847Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'latitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190523T164559/201905231645_201905232159.nc4 WARNING 2019-06-11 02:44:20,847Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'depth' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190523T164559/201905231645_201905232159.nc4 INFO 2019-06-11 02:44:20,854Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2019-06-11 02:44:20,860Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage WARNING 2019-06-11 02:44:20,860Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'platform_average_current' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190523T164559/201905231645_201905232159.nc4 INFO 2019-06-11 02:44:21,792Z lrauvNc4ToNetcdf.py createNav():458 platform_pitch_angle -> pitch: {'units': 'rad', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-06-11 02:44:22,726Z lrauvNc4ToNetcdf.py createNav():458 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-06-11 02:44:23,652Z lrauvNc4ToNetcdf.py createNav():458 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-06-11 02:44:23,653Z lrauvNc4ToNetcdf.py nudge_coords():575 /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190523T164559/201905231645_201905232159.nc4 INFO 2019-06-11 02:44:24,931Z lrauvNc4ToNetcdf.py nudge_coords():593 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) INFO 2019-06-11 02:44:24,934Z lrauvNc4ToNetcdf.py nudge_coords():609 - - - 526 3.54 - - INFO 2019-06-11 02:44:24,939Z lrauvNc4ToNetcdf.py nudge_coords():631 0: 0.358 0.0003353 -0.0000633 241 1.62 -4.60 -7.26 INFO 2019-06-11 02:44:24,945Z lrauvNc4ToNetcdf.py nudge_coords():631 1: 0.336 0.0002153 -0.0000037 225 1.51 -0.28 -0.45 INFO 2019-06-11 02:44:24,951Z lrauvNc4ToNetcdf.py nudge_coords():631 2: 0.321 0.0031916 -0.0006763 2271 15.29 -5.19 -8.19 INFO 2019-06-11 02:44:24,958Z lrauvNc4ToNetcdf.py nudge_coords():631 3: 0.315 0.0004448 -0.0000630 415 2.80 -2.64 -4.17 INFO 2019-06-11 02:44:24,964Z lrauvNc4ToNetcdf.py nudge_coords():631 4: 0.361 0.0001703 -0.0000088 163 1.09 -0.95 -1.50 INFO 2019-06-11 02:44:24,970Z lrauvNc4ToNetcdf.py nudge_coords():631 5: 0.350 0.0017528 -0.0006446 1529 10.29 -7.34 -11.60 INFO 2019-06-11 02:44:24,976Z lrauvNc4ToNetcdf.py nudge_coords():631 6: 0.337 0.0005908 -0.0002202 864 5.81 -4.44 -7.02 INFO 2019-06-11 02:44:24,982Z lrauvNc4ToNetcdf.py nudge_coords():631 7: 0.362 0.0002757 -0.0000905 417 2.80 -3.79 -5.99 INFO 2019-06-11 02:44:24,989Z lrauvNc4ToNetcdf.py nudge_coords():631 8: 0.368 0.0000850 -0.0000073 121 0.81 -1.06 -1.68 INFO 2019-06-11 02:44:24,996Z lrauvNc4ToNetcdf.py nudge_coords():631 9: 0.369 0.0015205 -0.0003629 5434 36.60 -1.16 -1.84 INFO 2019-06-11 02:44:25,002Z lrauvNc4ToNetcdf.py nudge_coords():631 10: 0.366 0.0003068 0.0000017 303 2.35 0.08 0.13 INFO 2019-06-11 02:44:25,008Z lrauvNc4ToNetcdf.py nudge_coords():631 11: 0.348 0.0029956 0.0001161 5812 39.17 0.35 0.55 INFO 2019-06-11 02:44:25,015Z lrauvNc4ToNetcdf.py nudge_coords():631 12: 0.345 0.0007192 -0.0000172 1176 8.26 -0.24 -0.39 INFO 2019-06-11 02:44:25,021Z lrauvNc4ToNetcdf.py nudge_coords():631 13: 0.365 0.0003121 0.0001614 799 5.37 3.50 5.56 INFO 2019-06-11 02:44:25,027Z lrauvNc4ToNetcdf.py nudge_coords():631 14: 0.345 -0.0002862 0.0002382 801 5.39 5.16 8.19 INFO 2019-06-11 02:44:25,033Z lrauvNc4ToNetcdf.py nudge_coords():631 15: 0.368 -0.0000056 -0.0000037 47 0.32 -1.36 -2.17 INFO 2019-06-11 02:44:25,039Z lrauvNc4ToNetcdf.py nudge_coords():631 16: 0.334 0.0000661 0.0000102 144 0.96 1.24 1.97 INFO 2019-06-11 02:44:25,045Z lrauvNc4ToNetcdf.py nudge_coords():631 17: 0.373 0.0021251 0.0003827 5072 34.17 1.31 2.08 INFO 2019-06-11 02:44:25,052Z lrauvNc4ToNetcdf.py nudge_coords():631 18: 0.328 0.0002898 0.0000053 405 3.04 0.20 0.32 INFO 2019-06-11 02:44:25,058Z lrauvNc4ToNetcdf.py nudge_coords():631 19: 0.358 0.0000120 0.0000103 43 0.28 4.26 6.76 INFO 2019-06-11 02:44:25,064Z lrauvNc4ToNetcdf.py nudge_coords():631 20: 0.373 0.0002748 0.0001635 799 5.37 3.55 5.64 INFO 2019-06-11 02:44:25,070Z lrauvNc4ToNetcdf.py nudge_coords():631 21: 0.365 0.0000299 0.0000225 87 0.58 4.54 7.20 INFO 2019-06-11 02:44:25,076Z lrauvNc4ToNetcdf.py nudge_coords():631 22: 0.371 -0.0000140 -0.0000085 178 1.19 -0.83 -1.32 INFO 2019-06-11 02:44:25,082Z lrauvNc4ToNetcdf.py nudge_coords():631 23: 0.338 0.0002377 -0.0000384 355 2.38 -1.88 -2.98 INFO 2019-06-11 02:44:25,088Z lrauvNc4ToNetcdf.py nudge_coords():631 24: 0.383 0.0002836 -0.0000547 392 2.63 -2.42 -3.85 INFO 2019-06-11 02:44:25,094Z lrauvNc4ToNetcdf.py nudge_coords():631 25: 0.387 0.0001829 -0.0000176 220 1.47 -1.39 -2.21 INFO 2019-06-11 02:44:25,100Z lrauvNc4ToNetcdf.py nudge_coords():631 26: 0.361 0.0020738 0.0000281 7003 47.17 0.07 0.11 INFO 2019-06-11 02:44:25,107Z lrauvNc4ToNetcdf.py nudge_coords():631 27: 0.327 0.0000934 0.0000462 407 3.14 1.72 2.72 INFO 2019-06-11 02:44:25,113Z lrauvNc4ToNetcdf.py nudge_coords():631 28: 0.338 0.0013078 -0.0004938 2153 14.49 -3.98 -6.31 INFO 2019-06-11 02:44:25,119Z lrauvNc4ToNetcdf.py nudge_coords():631 29: 0.373 0.0003122 0.0000098 814 5.50 0.21 0.33 INFO 2019-06-11 02:44:25,126Z lrauvNc4ToNetcdf.py nudge_coords():631 30: 0.355 0.0000129 -0.0000892 863 5.80 -1.79 -2.85 INFO 2019-06-11 02:44:25,132Z lrauvNc4ToNetcdf.py nudge_coords():631 31: 0.364 0.0002275 -0.0000389 217 1.46 -3.12 -4.96 INFO 2019-06-11 02:44:25,138Z lrauvNc4ToNetcdf.py nudge_coords():631 32: 0.363 0.0000674 -0.0000276 162 1.08 -2.98 -4.73 INFO 2019-06-11 02:44:25,144Z lrauvNc4ToNetcdf.py nudge_coords():631 33: 0.366 0.0000866 -0.0006854 1952 13.15 -6.08 -9.66 INFO 2019-06-11 02:44:25,150Z lrauvNc4ToNetcdf.py nudge_coords():631 34: 0.372 0.0001960 -0.0001205 311 2.20 -6.38 -10.14 INFO 2019-06-11 02:44:25,156Z lrauvNc4ToNetcdf.py nudge_coords():631 35: 0.366 0.0007452 -0.0003799 978 6.59 -6.73 -10.68 INFO 2019-06-11 02:44:25,162Z lrauvNc4ToNetcdf.py nudge_coords():631 36: 0.365 0.0001820 0.0000037 203 1.50 0.29 0.46 INFO 2019-06-11 02:44:25,168Z lrauvNc4ToNetcdf.py nudge_coords():631 37: 0.380 0.0004599 -0.0001856 446 3.01 -7.20 -11.44 INFO 2019-06-11 02:44:25,174Z lrauvNc4ToNetcdf.py nudge_coords():631 38: 0.361 -0.0000663 -0.0000430 181 1.36 -3.70 -5.88 INFO 2019-06-11 02:44:25,180Z lrauvNc4ToNetcdf.py nudge_coords():631 39: 0.358 0.0003869 -0.0001517 370 2.50 -7.09 -11.26 INFO 2019-06-11 02:44:25,186Z lrauvNc4ToNetcdf.py nudge_coords():631 40: 0.350 0.0001207 -0.0000315 192 1.37 -2.68 -4.25 INFO 2019-06-11 02:44:25,192Z lrauvNc4ToNetcdf.py nudge_coords():631 41: 0.366 0.0000233 0.0000000 43 0.28 0.00 0.00 INFO 2019-06-11 02:44:25,198Z lrauvNc4ToNetcdf.py nudge_coords():631 42: 0.340 0.0005322 -0.0002018 862 5.86 -4.02 -6.39 INFO 2019-06-11 02:44:25,204Z lrauvNc4ToNetcdf.py nudge_coords():661 44: - - - 267 1.79 - - INFO 2019-06-11 02:44:25,204Z lrauvNc4ToNetcdf.py nudge_coords():665 Points in final series = 46263 INFO 2019-06-11 02:44:25,224Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():499 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20190523T154559/20190523T225940/data.csv INFO 2019-06-11 02:44:25,248Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():522 Found 0 position values from the Tracking database INFO 2019-06-11 02:44:25,258Z lrauvNc4ToNetcdf.py processResampleNc4File():1066 ['control_inputs_buoyancy_position', 'salinity', 'temperature', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'chromophoric_dissolved_organic_matter', 'chlorophyll', 'VolumeScatCoeff117deg700nm', 'petroleum_hydrocarbons', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_battery_charge', 'health_platform_average_voltage', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2019-06-11 02:44:25,525Z lrauvNc4ToNetcdf.py processResampleNc4File():1069 Wrote /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190523T164559/201905231645_201905232159_2S_scieng.nc