INFO 2019-06-11 02:44:25,684Z lrauvNc4ToNetcdf.py processResampleNc4File():930 Reading /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190523T215941/201905232159_201905232233.nc4 file...
INFO 2019-06-11 02:44:25,684Z lrauvNc4ToNetcdf.py processResampleNc4File():931 After copying to /tmp/201905232159_201905232233.nc4
INFO 2019-06-11 02:44:26,867Z lrauvNc4ToNetcdf.py processResampleNc4File():933 Read file /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190523T215941/201905232159_201905232233.nc4
INFO 2019-06-11 02:44:28,689Z lrauvNc4ToNetcdf.py processResampleNc4File():938 Creating t variable of the time indexes
WARNING 2019-06-11 02:44:28,694Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190523T215941/201905232159_201905232233.nc4
INFO 2019-06-11 02:44:28,728Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position
INFO 2019-06-11 02:44:28,730Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable sea_water_salinity empty so skipping
INFO 2019-06-11 02:44:28,731Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable sea_water_temperature empty so skipping
WARNING 2019-06-11 02:44:28,731Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190523T215941/201905232159_201905232233.nc4
WARNING 2019-06-11 02:44:28,731Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190523T215941/201905232159_201905232233.nc4
INFO 2019-06-11 02:44:28,746Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle
WARNING 2019-06-11 02:44:28,746Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190523T215941/201905232159_201905232233.nc4
INFO 2019-06-11 02:44:28,753Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position
INFO 2019-06-11 02:44:28,757Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group NAL9602 parameter time_fix renaming to fix_time
INFO 2019-06-11 02:44:28,761Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude
INFO 2019-06-11 02:44:28,765Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude
WARNING 2019-06-11 02:44:28,766Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'downwelling_photosynthetic_photon_flux_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190523T215941/201905232159_201905232233.nc4
INFO 2019-06-11 02:44:28,778Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle
INFO 2019-06-11 02:44:28,820Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate
WARNING 2019-06-11 02:44:28,820Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mass_concentration_of_chlorophyll_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190523T215941/201905232159_201905232233.nc4
WARNING 2019-06-11 02:44:28,820Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'Output470' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190523T215941/201905232159_201905232233.nc4
WARNING 2019-06-11 02:44:28,820Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'Output650' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190523T215941/201905232159_201905232233.nc4
INFO 2019-06-11 02:44:28,822Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable concentration_of_chromophoric_dissolved_organic_matter_in_sea_water empty so skipping
INFO 2019-06-11 02:44:28,823Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping
INFO 2019-06-11 02:44:28,824Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable BackscatteringCoeff700nm empty so skipping
INFO 2019-06-11 02:44:28,826Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable VolumeScatCoeff117deg700nm empty so skipping
INFO 2019-06-11 02:44:28,827Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable mass_concentration_of_petroleum_hydrocarbons_in_sea_water empty so skipping
INFO 2019-06-11 02:44:28,828Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable fix_residual_percent_distance_traveled empty so skipping
INFO 2019-06-11 02:44:28,934Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-06-11 02:44:29,042Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-06-11 02:44:29,147Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources
WARNING 2019-06-11 02:44:29,147Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'fix_residual_percent_distance_traveled' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190523T215941/201905232159_201905232233.nc4
WARNING 2019-06-11 02:44:29,147Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'longitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190523T215941/201905232159_201905232233.nc4
WARNING 2019-06-11 02:44:29,147Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'latitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190523T215941/201905232159_201905232233.nc4
WARNING 2019-06-11 02:44:29,147Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'depth' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190523T215941/201905232159_201905232233.nc4
INFO 2019-06-11 02:44:29,154Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge
INFO 2019-06-11 02:44:29,159Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage
WARNING 2019-06-11 02:44:29,159Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'platform_average_current' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190523T215941/201905232159_201905232233.nc4
INFO 2019-06-11 02:44:29,280Z lrauvNc4ToNetcdf.py createNav():458 platform_pitch_angle -> pitch: {'units': 'rad', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-06-11 02:44:29,398Z lrauvNc4ToNetcdf.py createNav():458 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-06-11 02:44:29,517Z lrauvNc4ToNetcdf.py createNav():458 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-06-11 02:44:29,518Z lrauvNc4ToNetcdf.py nudge_coords():575 /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190523T215941/201905232159_201905232233.nc4
INFO 2019-06-11 02:44:29,779Z lrauvNc4ToNetcdf.py nudge_coords():593 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s)
INFO 2019-06-11 02:44:29,781Z lrauvNc4ToNetcdf.py nudge_coords():609                  -            -            -       549    3.69              -              -
INFO 2019-06-11 02:44:29,783Z lrauvNc4ToNetcdf.py nudge_coords():631    0:        0.368   -0.0001423    0.0000259       383    2.57           1.18           1.87
INFO 2019-06-11 02:44:29,789Z lrauvNc4ToNetcdf.py nudge_coords():631    1:        0.368    0.0001187   -0.0000791       150    1.00          -9.20         -14.62
INFO 2019-06-11 02:44:29,795Z lrauvNc4ToNetcdf.py nudge_coords():631    2:        0.376    0.0005655    0.0001538      1206    8.13           2.20           3.50
INFO 2019-06-11 02:44:29,801Z lrauvNc4ToNetcdf.py nudge_coords():631    3:        0.352    0.0002094   -0.0001136       377    2.71          -4.87          -7.77
INFO 2019-06-11 02:44:29,807Z lrauvNc4ToNetcdf.py nudge_coords():631    4:        0.369    0.0002511   -0.0003316       761    5.13          -7.51         -11.97
INFO 2019-06-11 02:44:29,813Z lrauvNc4ToNetcdf.py nudge_coords():631    5:        0.369    0.0000385   -0.0000878       164    1.21          -8.42         -13.42
INFO 2019-06-11 02:44:29,818Z lrauvNc4ToNetcdf.py nudge_coords():631    6:        0.353    0.0000093   -0.0000410        43    0.28         -16.85         -26.85
INFO 2019-06-11 02:44:29,824Z lrauvNc4ToNetcdf.py nudge_coords():631    7:        0.337    0.0003907   -0.0003602       855    5.81          -7.21         -11.49
INFO 2019-06-11 02:44:29,830Z lrauvNc4ToNetcdf.py nudge_coords():661    9:            -            -            -       442    2.97              -              -
INFO 2019-06-11 02:44:29,830Z lrauvNc4ToNetcdf.py nudge_coords():665 Points in final series = 4930
INFO 2019-06-11 02:44:29,846Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():499 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20190523T205941/20190523T233315/data.csv
INFO 2019-06-11 02:44:29,872Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():522 Found 0 position values from the Tracking database
INFO 2019-06-11 02:44:29,876Z lrauvNc4ToNetcdf.py processResampleNc4File():1066 ['control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_battery_charge', 'health_platform_average_voltage', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time']
INFO 2019-06-11 02:44:30,086Z lrauvNc4ToNetcdf.py processResampleNc4File():1069 Wrote /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190523T215941/201905232159_201905232233_2S_scieng.nc