INFO 2019-06-11 02:44:45,308Z lrauvNc4ToNetcdf.py processResampleNc4File():930 Reading /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T004117/201905240041_201905240235.nc4 file... INFO 2019-06-11 02:44:45,309Z lrauvNc4ToNetcdf.py processResampleNc4File():931 After copying to /tmp/201905240041_201905240235.nc4 INFO 2019-06-11 02:44:46,365Z lrauvNc4ToNetcdf.py processResampleNc4File():933 Read file /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T004117/201905240041_201905240235.nc4 INFO 2019-06-11 02:44:52,014Z lrauvNc4ToNetcdf.py processResampleNc4File():938 Creating t variable of the time indexes WARNING 2019-06-11 02:44:52,022Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T004117/201905240041_201905240235.nc4 INFO 2019-06-11 02:44:52,051Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2019-06-11 02:44:52,470Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group CTD_NeilBrown parameter sea_water_salinity renaming to salinity INFO 2019-06-11 02:44:52,885Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group CTD_NeilBrown parameter sea_water_temperature renaming to temperature WARNING 2019-06-11 02:44:52,885Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T004117/201905240041_201905240235.nc4 WARNING 2019-06-11 02:44:52,885Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T004117/201905240041_201905240235.nc4 INFO 2019-06-11 02:44:52,924Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle WARNING 2019-06-11 02:44:52,924Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T004117/201905240041_201905240235.nc4 INFO 2019-06-11 02:44:52,929Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2019-06-11 02:44:52,933Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2019-06-11 02:44:52,938Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2019-06-11 02:44:52,942Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude WARNING 2019-06-11 02:44:52,942Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'downwelling_photosynthetic_photon_flux_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T004117/201905240041_201905240235.nc4 INFO 2019-06-11 02:44:52,999Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2019-06-11 02:44:53,197Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate WARNING 2019-06-11 02:44:53,197Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mass_concentration_of_chlorophyll_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T004117/201905240041_201905240235.nc4 WARNING 2019-06-11 02:44:53,197Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'Output470' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T004117/201905240041_201905240235.nc4 WARNING 2019-06-11 02:44:53,198Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'Output650' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T004117/201905240041_201905240235.nc4 INFO 2019-06-11 02:44:53,284Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter concentration_of_chromophoric_dissolved_organic_matter_in_sea_water renaming to chromophoric_dissolved_organic_matter INFO 2019-06-11 02:44:53,370Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2019-06-11 02:44:53,371Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable BackscatteringCoeff700nm empty so skipping INFO 2019-06-11 02:44:53,457Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter VolumeScatCoeff117deg700nm renaming to VolumeScatCoeff117deg700nm INFO 2019-06-11 02:44:53,542Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_petroleum_hydrocarbons_in_sea_water renaming to petroleum_hydrocarbons INFO 2019-06-11 02:44:53,546Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2019-06-11 02:44:53,898Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2019-06-11 02:44:54,247Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2019-06-11 02:44:54,595Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources WARNING 2019-06-11 02:44:54,596Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'fix_residual_percent_distance_traveled' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T004117/201905240041_201905240235.nc4 WARNING 2019-06-11 02:44:54,596Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'longitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T004117/201905240041_201905240235.nc4 WARNING 2019-06-11 02:44:54,596Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'latitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T004117/201905240041_201905240235.nc4 WARNING 2019-06-11 02:44:54,596Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'depth' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T004117/201905240041_201905240235.nc4 INFO 2019-06-11 02:44:54,603Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2019-06-11 02:44:54,608Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage WARNING 2019-06-11 02:44:54,609Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'platform_average_current' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T004117/201905240041_201905240235.nc4 INFO 2019-06-11 02:44:54,958Z lrauvNc4ToNetcdf.py createNav():458 platform_pitch_angle -> pitch: {'units': 'rad', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-06-11 02:44:55,313Z lrauvNc4ToNetcdf.py createNav():458 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-06-11 02:44:55,672Z lrauvNc4ToNetcdf.py createNav():458 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-06-11 02:44:55,673Z lrauvNc4ToNetcdf.py nudge_coords():575 /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T004117/201905240041_201905240235.nc4 INFO 2019-06-11 02:44:56,232Z lrauvNc4ToNetcdf.py nudge_coords():593 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) INFO 2019-06-11 02:44:56,234Z lrauvNc4ToNetcdf.py nudge_coords():609 - - - 99 0.66 - - INFO 2019-06-11 02:44:56,237Z lrauvNc4ToNetcdf.py nudge_coords():631 0: 0.355 -0.0003327 -0.0005512 928 6.24 -10.25 -16.36 INFO 2019-06-11 02:44:56,243Z lrauvNc4ToNetcdf.py nudge_coords():631 1: 0.324 -0.0001357 -0.0002348 418 2.81 -9.70 -15.49 INFO 2019-06-11 02:44:56,249Z lrauvNc4ToNetcdf.py nudge_coords():631 2: 0.365 -0.0000257 -0.0000425 81 0.55 -9.00 -14.37 INFO 2019-06-11 02:44:56,255Z lrauvNc4ToNetcdf.py nudge_coords():631 3: 0.373 -0.0001823 -0.0003960 602 4.05 -11.34 -18.12 INFO 2019-06-11 02:44:56,261Z lrauvNc4ToNetcdf.py nudge_coords():631 4: 0.365 -0.0000960 -0.0001623 206 1.38 -13.62 -21.77 INFO 2019-06-11 02:44:56,267Z lrauvNc4ToNetcdf.py nudge_coords():631 5: 0.349 -0.0010794 -0.0025144 3444 23.18 -12.54 -20.10 INFO 2019-06-11 02:44:56,273Z lrauvNc4ToNetcdf.py nudge_coords():631 6: 0.398 -0.0002015 -0.0006885 774 5.21 -15.27 -24.50 INFO 2019-06-11 02:44:56,279Z lrauvNc4ToNetcdf.py nudge_coords():631 7: 0.317 -0.0000375 -0.0001207 148 1.00 -14.00 -22.47 INFO 2019-06-11 02:44:56,285Z lrauvNc4ToNetcdf.py nudge_coords():631 8: 0.350 0.0007584 -0.0036061 3396 22.87 -18.31 -29.22 INFO 2019-06-11 02:44:56,291Z lrauvNc4ToNetcdf.py nudge_coords():631 9: 0.367 0.0000188 -0.0001107 136 0.97 -13.19 -21.04 INFO 2019-06-11 02:44:56,298Z lrauvNc4ToNetcdf.py nudge_coords():631 10: 0.364 0.0008170 -0.0023648 3136 21.12 -13.03 -20.75 INFO 2019-06-11 02:44:56,304Z lrauvNc4ToNetcdf.py nudge_coords():631 11: 0.347 0.0001064 -0.0002325 401 2.96 -9.12 -14.53 INFO 2019-06-11 02:44:56,310Z lrauvNc4ToNetcdf.py nudge_coords():661 13: - - - 3110 20.94 - - INFO 2019-06-11 02:44:56,310Z lrauvNc4ToNetcdf.py nudge_coords():665 Points in final series = 16780 INFO 2019-06-11 02:44:56,327Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():499 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20190523T234117/20190524T033520/data.csv INFO 2019-06-11 02:44:56,360Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():522 Found 0 position values from the Tracking database INFO 2019-06-11 02:44:56,366Z lrauvNc4ToNetcdf.py processResampleNc4File():1066 ['control_inputs_buoyancy_position', 'salinity', 'temperature', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'chromophoric_dissolved_organic_matter', 'chlorophyll', 'VolumeScatCoeff117deg700nm', 'petroleum_hydrocarbons', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_battery_charge', 'health_platform_average_voltage', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2019-06-11 02:44:56,796Z lrauvNc4ToNetcdf.py processResampleNc4File():1069 Wrote /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T004117/201905240041_201905240235_2S_scieng.nc