INFO 2019-06-11 03:04:42,882Z lrauvNc4ToNetcdf.py processResampleNc4File():930 Reading /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T023520/201905240235_201905240301.nc4 file...
INFO 2019-06-11 03:04:42,882Z lrauvNc4ToNetcdf.py processResampleNc4File():931 After copying to /tmp/201905240235_201905240301.nc4
INFO 2019-06-11 03:04:44,089Z lrauvNc4ToNetcdf.py processResampleNc4File():933 Read file /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T023520/201905240235_201905240301.nc4
INFO 2019-06-11 03:04:45,569Z lrauvNc4ToNetcdf.py processResampleNc4File():938 Creating t variable of the time indexes
WARNING 2019-06-11 03:04:45,578Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T023520/201905240235_201905240301.nc4
INFO 2019-06-11 03:04:45,733Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group CTD_NeilBrown parameter sea_water_salinity renaming to salinity
INFO 2019-06-11 03:04:45,882Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group CTD_NeilBrown parameter sea_water_temperature renaming to temperature
WARNING 2019-06-11 03:04:45,882Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T023520/201905240235_201905240301.nc4
WARNING 2019-06-11 03:04:45,882Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T023520/201905240235_201905240301.nc4
WARNING 2019-06-11 03:04:45,882Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T023520/201905240235_201905240301.nc4
WARNING 2019-06-11 03:04:45,882Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'downwelling_photosynthetic_photon_flux_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T023520/201905240235_201905240301.nc4
WARNING 2019-06-11 03:04:45,882Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mass_concentration_of_chlorophyll_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T023520/201905240235_201905240301.nc4
WARNING 2019-06-11 03:04:45,882Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'Output470' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T023520/201905240235_201905240301.nc4
WARNING 2019-06-11 03:04:45,883Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'Output650' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T023520/201905240235_201905240301.nc4
INFO 2019-06-11 03:04:45,919Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter concentration_of_chromophoric_dissolved_organic_matter_in_sea_water renaming to chromophoric_dissolved_organic_matter
INFO 2019-06-11 03:04:45,952Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll
INFO 2019-06-11 03:04:45,954Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable BackscatteringCoeff700nm empty so skipping
INFO 2019-06-11 03:04:45,986Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter VolumeScatCoeff117deg700nm renaming to VolumeScatCoeff117deg700nm
INFO 2019-06-11 03:04:46,019Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_petroleum_hydrocarbons_in_sea_water renaming to petroleum_hydrocarbons
INFO 2019-06-11 03:04:46,020Z lrauvNc4ToNetcdf.py nudge_coords():575 /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T023520/201905240235_201905240301.nc4
INFO 2019-06-11 03:04:46,283Z lrauvNc4ToNetcdf.py nudge_coords():593 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s)
INFO 2019-06-11 03:04:46,285Z lrauvNc4ToNetcdf.py nudge_coords():609                  -            -            -         3    0.01              -              -
INFO 2019-06-11 03:04:46,287Z lrauvNc4ToNetcdf.py nudge_coords():631    0:        0.353   -0.0000263   -0.0003810       452    3.44         -12.84         -20.55
INFO 2019-06-11 03:04:46,293Z lrauvNc4ToNetcdf.py nudge_coords():631    1:        0.350    0.0008385   -0.0027743      3071   20.68         -15.60         -24.86
INFO 2019-06-11 03:04:46,299Z lrauvNc4ToNetcdf.py nudge_coords():631    2:        0.351    0.0000807   -0.0001643       184    1.30         -14.67         -23.38
INFO 2019-06-11 03:04:46,305Z lrauvNc4ToNetcdf.py nudge_coords():661    4:            -            -            -        43    0.32              -              -
INFO 2019-06-11 03:04:46,305Z lrauvNc4ToNetcdf.py nudge_coords():665 Points in final series = 3750
INFO 2019-06-11 03:04:46,322Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():499 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20190524T013520/20190524T040106/data.csv
INFO 2019-06-11 03:04:46,348Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():522 Found 0 position values from the Tracking database
INFO 2019-06-11 03:04:46,352Z lrauvNc4ToNetcdf.py processResampleNc4File():1066 ['salinity', 'temperature', 'chromophoric_dissolved_organic_matter', 'chlorophyll', 'VolumeScatCoeff117deg700nm', 'petroleum_hydrocarbons', 'latitude', 'longitude', 'depth', 'time']
INFO 2019-06-11 03:04:46,656Z lrauvNc4ToNetcdf.py processResampleNc4File():1069 Wrote /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T023520/201905240235_201905240301_10S_sci.nc