INFO 2019-06-11 03:04:46,977Z lrauvNc4ToNetcdf.py processResampleNc4File():930 Reading /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T030107/201905240301_201905240327.nc4 file...
INFO 2019-06-11 03:04:46,977Z lrauvNc4ToNetcdf.py processResampleNc4File():931 After copying to /tmp/201905240301_201905240327.nc4
INFO 2019-06-11 03:04:48,454Z lrauvNc4ToNetcdf.py processResampleNc4File():933 Read file /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T030107/201905240301_201905240327.nc4
INFO 2019-06-11 03:04:49,958Z lrauvNc4ToNetcdf.py processResampleNc4File():938 Creating t variable of the time indexes
WARNING 2019-06-11 03:04:49,964Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T030107/201905240301_201905240327.nc4
INFO 2019-06-11 03:04:50,124Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group CTD_NeilBrown parameter sea_water_salinity renaming to salinity
INFO 2019-06-11 03:04:50,281Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group CTD_NeilBrown parameter sea_water_temperature renaming to temperature
WARNING 2019-06-11 03:04:50,281Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T030107/201905240301_201905240327.nc4
WARNING 2019-06-11 03:04:50,281Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T030107/201905240301_201905240327.nc4
WARNING 2019-06-11 03:04:50,281Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T030107/201905240301_201905240327.nc4
WARNING 2019-06-11 03:04:50,281Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'downwelling_photosynthetic_photon_flux_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T030107/201905240301_201905240327.nc4
WARNING 2019-06-11 03:04:50,281Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mass_concentration_of_chlorophyll_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T030107/201905240301_201905240327.nc4
WARNING 2019-06-11 03:04:50,281Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'Output470' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T030107/201905240301_201905240327.nc4
WARNING 2019-06-11 03:04:50,281Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'Output650' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T030107/201905240301_201905240327.nc4
INFO 2019-06-11 03:04:50,317Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter concentration_of_chromophoric_dissolved_organic_matter_in_sea_water renaming to chromophoric_dissolved_organic_matter
INFO 2019-06-11 03:04:50,352Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll
INFO 2019-06-11 03:04:50,354Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable BackscatteringCoeff700nm empty so skipping
INFO 2019-06-11 03:04:50,391Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter VolumeScatCoeff117deg700nm renaming to VolumeScatCoeff117deg700nm
INFO 2019-06-11 03:04:50,426Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_petroleum_hydrocarbons_in_sea_water renaming to petroleum_hydrocarbons
INFO 2019-06-11 03:04:50,427Z lrauvNc4ToNetcdf.py nudge_coords():575 /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T030107/201905240301_201905240327.nc4
INFO 2019-06-11 03:04:50,677Z lrauvNc4ToNetcdf.py nudge_coords():593 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s)
INFO 2019-06-11 03:04:50,679Z lrauvNc4ToNetcdf.py nudge_coords():609                  -            -            -         3    0.01              -              -
INFO 2019-06-11 03:04:50,681Z lrauvNc4ToNetcdf.py nudge_coords():631    0:        0.350    0.0000347   -0.0002358       415    3.06          -8.96         -14.29
INFO 2019-06-11 03:04:50,687Z lrauvNc4ToNetcdf.py nudge_coords():661    2:            -            -            -      3505   23.60              -              -
INFO 2019-06-11 03:04:50,687Z lrauvNc4ToNetcdf.py nudge_coords():665 Points in final series = 3920
INFO 2019-06-11 03:04:50,709Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():499 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20190524T020107/20190524T042748/data.csv
INFO 2019-06-11 03:04:50,729Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():522 Found 0 position values from the Tracking database
INFO 2019-06-11 03:04:50,733Z lrauvNc4ToNetcdf.py processResampleNc4File():1066 ['salinity', 'temperature', 'chromophoric_dissolved_organic_matter', 'chlorophyll', 'VolumeScatCoeff117deg700nm', 'petroleum_hydrocarbons', 'latitude', 'longitude', 'depth', 'time']
INFO 2019-06-11 03:04:50,997Z lrauvNc4ToNetcdf.py processResampleNc4File():1069 Wrote /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T030107/201905240301_201905240327_10S_sci.nc