INFO 2019-06-11 02:45:22,997Z lrauvNc4ToNetcdf.py processResampleNc4File():930 Reading /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T062406/201905240624_201905241604.nc4 file... INFO 2019-06-11 02:45:22,998Z lrauvNc4ToNetcdf.py processResampleNc4File():931 After copying to /tmp/201905240624_201905241604.nc4 INFO 2019-06-11 02:45:24,206Z lrauvNc4ToNetcdf.py processResampleNc4File():933 Read file /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T062406/201905240624_201905241604.nc4 INFO 2019-06-11 02:45:51,624Z lrauvNc4ToNetcdf.py processResampleNc4File():938 Creating t variable of the time indexes WARNING 2019-06-11 02:45:51,643Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T062406/201905240624_201905241604.nc4 INFO 2019-06-11 02:45:51,822Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2019-06-11 02:45:54,339Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group CTD_NeilBrown parameter sea_water_salinity renaming to salinity INFO 2019-06-11 02:45:56,854Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group CTD_NeilBrown parameter sea_water_temperature renaming to temperature WARNING 2019-06-11 02:45:56,854Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T062406/201905240624_201905241604.nc4 WARNING 2019-06-11 02:45:56,854Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T062406/201905240624_201905241604.nc4 INFO 2019-06-11 02:45:57,037Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle WARNING 2019-06-11 02:45:57,037Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T062406/201905240624_201905241604.nc4 INFO 2019-06-11 02:45:57,064Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2019-06-11 02:45:57,070Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2019-06-11 02:45:57,076Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2019-06-11 02:45:57,081Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude WARNING 2019-06-11 02:45:57,081Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'downwelling_photosynthetic_photon_flux_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T062406/201905240624_201905241604.nc4 INFO 2019-06-11 02:45:57,383Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2019-06-11 02:45:58,852Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate WARNING 2019-06-11 02:45:58,853Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mass_concentration_of_chlorophyll_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T062406/201905240624_201905241604.nc4 WARNING 2019-06-11 02:45:58,853Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'Output470' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T062406/201905240624_201905241604.nc4 WARNING 2019-06-11 02:45:58,853Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'Output650' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T062406/201905240624_201905241604.nc4 INFO 2019-06-11 02:45:59,353Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter concentration_of_chromophoric_dissolved_organic_matter_in_sea_water renaming to chromophoric_dissolved_organic_matter INFO 2019-06-11 02:45:59,855Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2019-06-11 02:45:59,857Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable BackscatteringCoeff700nm empty so skipping INFO 2019-06-11 02:46:00,359Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter VolumeScatCoeff117deg700nm renaming to VolumeScatCoeff117deg700nm INFO 2019-06-11 02:46:00,863Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_petroleum_hydrocarbons_in_sea_water renaming to petroleum_hydrocarbons INFO 2019-06-11 02:46:00,868Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2019-06-11 02:46:02,629Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2019-06-11 02:46:04,405Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2019-06-11 02:46:06,178Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources WARNING 2019-06-11 02:46:06,179Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'fix_residual_percent_distance_traveled' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T062406/201905240624_201905241604.nc4 WARNING 2019-06-11 02:46:06,179Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'longitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T062406/201905240624_201905241604.nc4 WARNING 2019-06-11 02:46:06,179Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'latitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T062406/201905240624_201905241604.nc4 WARNING 2019-06-11 02:46:06,179Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'depth' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T062406/201905240624_201905241604.nc4 INFO 2019-06-11 02:46:06,188Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2019-06-11 02:46:06,194Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage WARNING 2019-06-11 02:46:06,195Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'platform_average_current' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T062406/201905240624_201905241604.nc4 INFO 2019-06-11 02:46:07,894Z lrauvNc4ToNetcdf.py createNav():458 platform_pitch_angle -> pitch: {'units': 'rad', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-06-11 02:46:09,584Z lrauvNc4ToNetcdf.py createNav():458 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-06-11 02:46:11,268Z lrauvNc4ToNetcdf.py createNav():458 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-06-11 02:46:11,270Z lrauvNc4ToNetcdf.py nudge_coords():575 /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T062406/201905240624_201905241604.nc4 INFO 2019-06-11 02:46:13,506Z lrauvNc4ToNetcdf.py nudge_coords():593 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) INFO 2019-06-11 02:46:13,508Z lrauvNc4ToNetcdf.py nudge_coords():609 - - - 3 0.01 - - INFO 2019-06-11 02:46:13,517Z lrauvNc4ToNetcdf.py nudge_coords():631 0: 0.373 0.0000941 0.0001458 289 2.15 7.94 12.57 INFO 2019-06-11 02:46:13,523Z lrauvNc4ToNetcdf.py nudge_coords():631 1: 0.334 0.0020735 0.0000639 7046 47.46 0.16 0.25 INFO 2019-06-11 02:46:13,530Z lrauvNc4ToNetcdf.py nudge_coords():631 2: 0.369 0.0001110 -0.0001307 471 3.47 -4.42 -6.98 INFO 2019-06-11 02:46:13,537Z lrauvNc4ToNetcdf.py nudge_coords():631 3: 0.356 0.0001727 0.0004987 790 5.33 10.96 17.34 INFO 2019-06-11 02:46:13,543Z lrauvNc4ToNetcdf.py nudge_coords():631 4: 0.352 0.0001038 0.0001906 405 2.98 7.49 11.85 INFO 2019-06-11 02:46:13,549Z lrauvNc4ToNetcdf.py nudge_coords():631 5: 0.333 0.0019535 -0.0000133 6734 45.36 -0.03 -0.05 INFO 2019-06-11 02:46:13,556Z lrauvNc4ToNetcdf.py nudge_coords():631 6: 0.359 0.0001081 0.0000303 424 3.20 1.11 1.76 INFO 2019-06-11 02:46:13,562Z lrauvNc4ToNetcdf.py nudge_coords():631 7: 0.317 0.0002683 -0.0004155 1255 8.46 -5.74 -9.10 INFO 2019-06-11 02:46:13,569Z lrauvNc4ToNetcdf.py nudge_coords():631 8: 0.353 0.0000053 0.0001120 330 2.42 5.42 8.59 INFO 2019-06-11 02:46:13,576Z lrauvNc4ToNetcdf.py nudge_coords():631 9: 0.373 0.0005165 -0.0001359 789 5.32 -2.99 -4.73 INFO 2019-06-11 02:46:13,583Z lrauvNc4ToNetcdf.py nudge_coords():631 10: 0.373 0.0000012 0.0000697 260 1.95 4.20 6.64 INFO 2019-06-11 02:46:13,589Z lrauvNc4ToNetcdf.py nudge_coords():631 11: 0.345 0.0000536 -0.0000094 43 0.28 -3.88 -6.13 INFO 2019-06-11 02:46:13,595Z lrauvNc4ToNetcdf.py nudge_coords():631 12: 0.369 0.0005771 0.0000837 870 5.94 1.65 2.61 INFO 2019-06-11 02:46:13,602Z lrauvNc4ToNetcdf.py nudge_coords():631 13: 0.369 0.0000482 0.0000032 510 3.43 0.11 0.17 INFO 2019-06-11 02:46:13,608Z lrauvNc4ToNetcdf.py nudge_coords():631 14: 0.341 0.0000603 0.0000032 148 0.99 0.38 0.60 INFO 2019-06-11 02:46:13,615Z lrauvNc4ToNetcdf.py nudge_coords():631 15: 0.389 0.0034659 -0.0015824 5070 34.16 -5.36 -8.58 INFO 2019-06-11 02:46:13,622Z lrauvNc4ToNetcdf.py nudge_coords():631 16: 0.360 -0.0001218 -0.0001083 134 0.96 -13.06 -20.91 INFO 2019-06-11 02:46:13,628Z lrauvNc4ToNetcdf.py nudge_coords():631 17: 0.350 0.0049895 -0.0002702 5042 33.96 -0.91 -1.47 INFO 2019-06-11 02:46:13,635Z lrauvNc4ToNetcdf.py nudge_coords():631 18: 0.352 -0.0001857 0.0000223 311 2.43 1.05 1.70 INFO 2019-06-11 02:46:13,641Z lrauvNc4ToNetcdf.py nudge_coords():631 19: 0.340 0.0009932 -0.0013674 5119 34.49 -4.54 -7.35 INFO 2019-06-11 02:46:13,648Z lrauvNc4ToNetcdf.py nudge_coords():631 20: 0.370 -0.0004232 0.0005042 520 3.82 15.09 24.43 INFO 2019-06-11 02:46:13,654Z lrauvNc4ToNetcdf.py nudge_coords():631 21: 0.378 0.0008765 -0.0014088 4864 32.77 -4.92 -7.97 INFO 2019-06-11 02:46:13,661Z lrauvNc4ToNetcdf.py nudge_coords():631 22: 0.288 0.0000055 -0.0001647 466 3.41 -5.53 -8.96 INFO 2019-06-11 02:46:13,667Z lrauvNc4ToNetcdf.py nudge_coords():631 23: 0.348 0.0007285 -0.0024505 5252 35.38 -7.92 -12.84 INFO 2019-06-11 02:46:13,674Z lrauvNc4ToNetcdf.py nudge_coords():631 24: 0.372 -0.0001215 -0.0001202 336 2.56 -5.38 -8.71 INFO 2019-06-11 02:46:13,680Z lrauvNc4ToNetcdf.py nudge_coords():631 25: 0.354 -0.0010366 -0.0030194 5085 34.26 -10.07 -16.33 INFO 2019-06-11 02:46:13,687Z lrauvNc4ToNetcdf.py nudge_coords():631 26: 0.348 -0.0001937 -0.0002483 380 2.89 -9.83 -15.95 INFO 2019-06-11 02:46:13,693Z lrauvNc4ToNetcdf.py nudge_coords():631 27: 0.378 -0.0028666 -0.0040339 4946 33.33 -13.81 -22.43 INFO 2019-06-11 02:46:13,700Z lrauvNc4ToNetcdf.py nudge_coords():631 28: 0.367 -0.0003105 -0.0002233 422 3.10 -8.21 -13.34 INFO 2019-06-11 02:46:13,707Z lrauvNc4ToNetcdf.py nudge_coords():631 29: 0.363 -0.0025512 -0.0039030 5098 34.35 -12.96 -21.06 INFO 2019-06-11 02:46:13,713Z lrauvNc4ToNetcdf.py nudge_coords():631 30: 0.363 -0.0002473 -0.0001403 275 2.18 -7.35 -11.95 INFO 2019-06-11 02:46:13,720Z lrauvNc4ToNetcdf.py nudge_coords():631 31: 0.374 -0.0018830 -0.0038867 5083 34.25 -12.95 -21.03 INFO 2019-06-11 02:46:13,727Z lrauvNc4ToNetcdf.py nudge_coords():631 32: 0.362 -0.0000418 0.0000000 38 0.25 0.00 0.00 INFO 2019-06-11 02:46:13,733Z lrauvNc4ToNetcdf.py nudge_coords():631 33: 0.366 -0.0000729 -0.0000476 169 1.23 -4.39 -7.14 INFO 2019-06-11 02:46:13,739Z lrauvNc4ToNetcdf.py nudge_coords():631 34: 0.368 -0.0002298 -0.0000798 487 3.71 -2.45 -3.98 INFO 2019-06-11 02:46:13,745Z lrauvNc4ToNetcdf.py nudge_coords():631 35: 0.365 -0.0002538 -0.0035771 3134 21.10 -19.42 -31.41 INFO 2019-06-11 02:46:13,752Z lrauvNc4ToNetcdf.py nudge_coords():631 36: 0.364 0.0000355 -0.0001553 446 3.34 -5.33 -8.63 INFO 2019-06-11 02:46:13,759Z lrauvNc4ToNetcdf.py nudge_coords():631 37: 0.352 -0.0004945 -0.0043077 3154 21.23 -23.35 -37.59 INFO 2019-06-11 02:46:13,765Z lrauvNc4ToNetcdf.py nudge_coords():631 38: 0.373 0.0000053 -0.0002752 331 2.50 -12.67 -20.41 INFO 2019-06-11 02:46:13,772Z lrauvNc4ToNetcdf.py nudge_coords():631 39: 0.367 0.0001236 -0.0032846 3077 20.72 -18.37 -29.38 INFO 2019-06-11 02:46:13,779Z lrauvNc4ToNetcdf.py nudge_coords():631 40: 0.336 -0.0000087 -0.0004640 636 4.43 -12.11 -19.39 INFO 2019-06-11 02:46:13,786Z lrauvNc4ToNetcdf.py nudge_coords():631 41: 0.366 0.0001269 -0.0023217 3134 21.10 -12.76 -20.39 INFO 2019-06-11 02:46:13,792Z lrauvNc4ToNetcdf.py nudge_coords():631 42: 0.376 -0.0005118 -0.0011772 1151 8.04 -16.96 -27.15 INFO 2019-06-11 02:46:13,799Z lrauvNc4ToNetcdf.py nudge_coords():661 44: - - - 822 5.53 - - INFO 2019-06-11 02:46:13,799Z lrauvNc4ToNetcdf.py nudge_coords():665 Points in final series = 85349 INFO 2019-06-11 02:46:13,816Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():499 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20190524T052407/20190524T170436/data.csv INFO 2019-06-11 02:46:13,845Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():522 Found 0 position values from the Tracking database INFO 2019-06-11 02:46:13,854Z lrauvNc4ToNetcdf.py processResampleNc4File():1066 ['control_inputs_buoyancy_position', 'salinity', 'temperature', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'chromophoric_dissolved_organic_matter', 'chlorophyll', 'VolumeScatCoeff117deg700nm', 'petroleum_hydrocarbons', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_battery_charge', 'health_platform_average_voltage', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2019-06-11 02:46:14,556Z lrauvNc4ToNetcdf.py processResampleNc4File():1069 Wrote /mbari/LRAUV/whoidhs/missionlogs/2019/20190523_20190524/20190524T062406/201905240624_201905241604_2S_scieng.nc