INFO 2019-06-11 02:46:14,797Z lrauvNc4ToNetcdf.py processResampleNc4File():930 Reading /mbari/LRAUV/whoidhs/missionlogs/2019/20190530_20190531/20190530T224933/201905302249_201905302332.nc4 file...
INFO 2019-06-11 02:46:14,798Z lrauvNc4ToNetcdf.py processResampleNc4File():931 After copying to /tmp/201905302249_201905302332.nc4
INFO 2019-06-11 02:46:15,801Z lrauvNc4ToNetcdf.py processResampleNc4File():933 Read file /mbari/LRAUV/whoidhs/missionlogs/2019/20190530_20190531/20190530T224933/201905302249_201905302332.nc4
INFO 2019-06-11 02:46:18,045Z lrauvNc4ToNetcdf.py processResampleNc4File():938 Creating t variable of the time indexes
WARNING 2019-06-11 02:46:18,051Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190530_20190531/20190530T224933/201905302249_201905302332.nc4
INFO 2019-06-11 02:46:18,061Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position
INFO 2019-06-11 02:46:18,200Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group CTD_NeilBrown parameter sea_water_salinity renaming to salinity
INFO 2019-06-11 02:46:18,340Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group CTD_NeilBrown parameter sea_water_temperature renaming to temperature
WARNING 2019-06-11 02:46:18,340Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190530_20190531/20190530T224933/201905302249_201905302332.nc4
WARNING 2019-06-11 02:46:18,340Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190530_20190531/20190530T224933/201905302249_201905302332.nc4
INFO 2019-06-11 02:46:18,355Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle
WARNING 2019-06-11 02:46:18,355Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190530_20190531/20190530T224933/201905302249_201905302332.nc4
INFO 2019-06-11 02:46:18,360Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position
INFO 2019-06-11 02:46:18,364Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group NAL9602 parameter time_fix renaming to fix_time
INFO 2019-06-11 02:46:18,368Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude
INFO 2019-06-11 02:46:18,372Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude
WARNING 2019-06-11 02:46:18,372Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'downwelling_photosynthetic_photon_flux_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190530_20190531/20190530T224933/201905302249_201905302332.nc4
INFO 2019-06-11 02:46:18,393Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle
INFO 2019-06-11 02:46:18,464Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate
WARNING 2019-06-11 02:46:18,464Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mass_concentration_of_chlorophyll_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190530_20190531/20190530T224933/201905302249_201905302332.nc4
WARNING 2019-06-11 02:46:18,464Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'Output470' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190530_20190531/20190530T224933/201905302249_201905302332.nc4
WARNING 2019-06-11 02:46:18,464Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'Output650' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190530_20190531/20190530T224933/201905302249_201905302332.nc4
INFO 2019-06-11 02:46:18,496Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter concentration_of_chromophoric_dissolved_organic_matter_in_sea_water renaming to chromophoric_dissolved_organic_matter
INFO 2019-06-11 02:46:18,527Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll
INFO 2019-06-11 02:46:18,528Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable BackscatteringCoeff700nm empty so skipping
INFO 2019-06-11 02:46:18,559Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter VolumeScatCoeff117deg700nm renaming to VolumeScatCoeff117deg700nm
INFO 2019-06-11 02:46:18,591Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_petroleum_hydrocarbons_in_sea_water renaming to petroleum_hydrocarbons
INFO 2019-06-11 02:46:18,594Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources
INFO 2019-06-11 02:46:18,729Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-06-11 02:46:18,863Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-06-11 02:46:18,996Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources
WARNING 2019-06-11 02:46:18,996Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'fix_residual_percent_distance_traveled' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190530_20190531/20190530T224933/201905302249_201905302332.nc4
WARNING 2019-06-11 02:46:18,996Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'longitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190530_20190531/20190530T224933/201905302249_201905302332.nc4
WARNING 2019-06-11 02:46:18,996Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'latitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190530_20190531/20190530T224933/201905302249_201905302332.nc4
WARNING 2019-06-11 02:46:18,996Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'depth' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190530_20190531/20190530T224933/201905302249_201905302332.nc4
INFO 2019-06-11 02:46:19,000Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable platform_battery_charge empty so skipping
INFO 2019-06-11 02:46:19,002Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable platform_battery_voltage empty so skipping
WARNING 2019-06-11 02:46:19,002Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'platform_average_current' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190530_20190531/20190530T224933/201905302249_201905302332.nc4
INFO 2019-06-11 02:46:19,147Z lrauvNc4ToNetcdf.py createNav():458 platform_pitch_angle -> pitch: {'units': 'rad', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-06-11 02:46:19,290Z lrauvNc4ToNetcdf.py createNav():458 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-06-11 02:46:19,445Z lrauvNc4ToNetcdf.py createNav():458 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-06-11 02:46:19,446Z lrauvNc4ToNetcdf.py nudge_coords():575 /mbari/LRAUV/whoidhs/missionlogs/2019/20190530_20190531/20190530T224933/201905302249_201905302332.nc4
INFO 2019-06-11 02:46:19,737Z lrauvNc4ToNetcdf.py nudge_coords():593 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s)
INFO 2019-06-11 02:46:19,739Z lrauvNc4ToNetcdf.py nudge_coords():609                  -            -            -        10    0.06              -              -
INFO 2019-06-11 02:46:19,742Z lrauvNc4ToNetcdf.py nudge_coords():631    0:        0.401    0.0001099   -0.0000141       400    2.69          -0.62          -0.97
INFO 2019-06-11 02:46:19,748Z lrauvNc4ToNetcdf.py nudge_coords():631    1:        0.359    0.0000530    0.0000162       152    1.02           1.87           2.95
INFO 2019-06-11 02:46:19,754Z lrauvNc4ToNetcdf.py nudge_coords():631    2:        0.373    0.0004371   -0.0003379      3269   22.02          -1.80          -2.84
INFO 2019-06-11 02:46:19,760Z lrauvNc4ToNetcdf.py nudge_coords():631    3:        0.362    0.0000466   -0.0000007        38    0.25          -0.34          -0.54
INFO 2019-06-11 02:46:19,766Z lrauvNc4ToNetcdf.py nudge_coords():631    4:        0.334    0.0004805   -0.0000197      1351    9.40          -0.25          -0.39
INFO 2019-06-11 02:46:19,772Z lrauvNc4ToNetcdf.py nudge_coords():631    5:        0.364    0.0003386    0.0000564       796    5.36           1.23           1.95
INFO 2019-06-11 02:46:19,777Z lrauvNc4ToNetcdf.py nudge_coords():661    7:            -            -            -       306    2.05              -              -
INFO 2019-06-11 02:46:19,778Z lrauvNc4ToNetcdf.py nudge_coords():665 Points in final series = 6322
INFO 2019-06-11 02:46:19,793Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():499 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20190530T214933/20190531T003227/data.csv
INFO 2019-06-11 02:46:19,812Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():522 Found 0 position values from the Tracking database
INFO 2019-06-11 02:46:19,816Z lrauvNc4ToNetcdf.py processResampleNc4File():1066 ['control_inputs_buoyancy_position', 'salinity', 'temperature', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'chromophoric_dissolved_organic_matter', 'chlorophyll', 'VolumeScatCoeff117deg700nm', 'petroleum_hydrocarbons', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time']
INFO 2019-06-11 02:46:20,382Z lrauvNc4ToNetcdf.py processResampleNc4File():1069 Wrote /mbari/LRAUV/whoidhs/missionlogs/2019/20190530_20190531/20190530T224933/201905302249_201905302332_2S_scieng.nc