INFO 2019-06-11 02:53:34,666Z lrauvNc4ToNetcdf.py processResampleNc4File():930 Reading /mbari/LRAUV/whoidhs/missionlogs/2019/20190603_20190608/20190606T151829/201906061518_201906070630.nc4 file... INFO 2019-06-11 02:53:34,667Z lrauvNc4ToNetcdf.py processResampleNc4File():931 After copying to /tmp/201906061518_201906070630.nc4 INFO 2019-06-11 02:53:35,776Z lrauvNc4ToNetcdf.py processResampleNc4File():933 Read file /mbari/LRAUV/whoidhs/missionlogs/2019/20190603_20190608/20190606T151829/201906061518_201906070630.nc4 INFO 2019-06-11 02:54:18,824Z lrauvNc4ToNetcdf.py processResampleNc4File():938 Creating t variable of the time indexes WARNING 2019-06-11 02:54:18,846Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190603_20190608/20190606T151829/201906061518_201906070630.nc4 INFO 2019-06-11 02:54:18,982Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position WARNING 2019-06-11 02:54:18,982Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190603_20190608/20190606T151829/201906061518_201906070630.nc4 WARNING 2019-06-11 02:54:18,982Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190603_20190608/20190606T151829/201906061518_201906070630.nc4 WARNING 2019-06-11 02:54:18,983Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190603_20190608/20190606T151829/201906061518_201906070630.nc4 WARNING 2019-06-11 02:54:18,983Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190603_20190608/20190606T151829/201906061518_201906070630.nc4 INFO 2019-06-11 02:54:19,154Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle WARNING 2019-06-11 02:54:19,155Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190603_20190608/20190606T151829/201906061518_201906070630.nc4 INFO 2019-06-11 02:54:19,189Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2019-06-11 02:54:19,195Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2019-06-11 02:54:19,201Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2019-06-11 02:54:19,207Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude WARNING 2019-06-11 02:54:19,207Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'downwelling_photosynthetic_photon_flux_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190603_20190608/20190606T151829/201906061518_201906070630.nc4 INFO 2019-06-11 02:54:19,531Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2019-06-11 02:54:21,747Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate WARNING 2019-06-11 02:54:21,747Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mass_concentration_of_chlorophyll_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190603_20190608/20190606T151829/201906061518_201906070630.nc4 WARNING 2019-06-11 02:54:21,747Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'Output470' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190603_20190608/20190606T151829/201906061518_201906070630.nc4 WARNING 2019-06-11 02:54:21,747Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'Output650' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190603_20190608/20190606T151829/201906061518_201906070630.nc4 INFO 2019-06-11 02:54:22,707Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter concentration_of_chromophoric_dissolved_organic_matter_in_sea_water renaming to chromophoric_dissolved_organic_matter INFO 2019-06-11 02:54:23,675Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2019-06-11 02:54:23,677Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable BackscatteringCoeff700nm empty so skipping INFO 2019-06-11 02:54:24,655Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter VolumeScatCoeff117deg700nm renaming to VolumeScatCoeff117deg700nm INFO 2019-06-11 02:54:25,627Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_petroleum_hydrocarbons_in_sea_water renaming to petroleum_hydrocarbons INFO 2019-06-11 02:54:25,634Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2019-06-11 02:54:28,390Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2019-06-11 02:54:31,131Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2019-06-11 02:54:33,892Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources WARNING 2019-06-11 02:54:33,892Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'fix_residual_percent_distance_traveled' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190603_20190608/20190606T151829/201906061518_201906070630.nc4 WARNING 2019-06-11 02:54:33,892Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'longitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190603_20190608/20190606T151829/201906061518_201906070630.nc4 WARNING 2019-06-11 02:54:33,892Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'latitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190603_20190608/20190606T151829/201906061518_201906070630.nc4 WARNING 2019-06-11 02:54:33,892Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'depth' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190603_20190608/20190606T151829/201906061518_201906070630.nc4 INFO 2019-06-11 02:54:33,902Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2019-06-11 02:54:33,912Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage WARNING 2019-06-11 02:54:33,912Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'platform_average_current' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190603_20190608/20190606T151829/201906061518_201906070630.nc4 INFO 2019-06-11 02:54:36,614Z lrauvNc4ToNetcdf.py createNav():458 platform_pitch_angle -> pitch: {'units': 'rad', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-06-11 02:54:39,278Z lrauvNc4ToNetcdf.py createNav():458 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-06-11 02:54:41,962Z lrauvNc4ToNetcdf.py createNav():458 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-06-11 02:54:41,965Z lrauvNc4ToNetcdf.py nudge_coords():575 /mbari/LRAUV/whoidhs/missionlogs/2019/20190603_20190608/20190606T151829/201906061518_201906070630.nc4 INFO 2019-06-11 02:54:45,420Z lrauvNc4ToNetcdf.py nudge_coords():593 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) INFO 2019-06-11 02:54:45,422Z lrauvNc4ToNetcdf.py nudge_coords():609 - - - 2268 15.26 - - INFO 2019-06-11 02:54:45,438Z lrauvNc4ToNetcdf.py nudge_coords():631 0: 0.354 -0.0036370 -0.0019623 5900 39.79 9.02 -9.14 INFO 2019-06-11 02:54:45,445Z lrauvNc4ToNetcdf.py nudge_coords():631 1: 0.388 -0.0001265 0.0000960 155 1.10 -15.90 16.12 INFO 2019-06-11 02:54:45,452Z lrauvNc4ToNetcdf.py nudge_coords():631 2: 0.375 -0.0016082 -0.0017499 5170 34.82 9.19 -9.31 INFO 2019-06-11 02:54:45,459Z lrauvNc4ToNetcdf.py nudge_coords():631 3: 0.352 -0.0000522 0.0000952 169 1.31 -13.33 13.51 INFO 2019-06-11 02:54:45,465Z lrauvNc4ToNetcdf.py nudge_coords():631 4: 0.376 -0.0042851 -0.0008959 5534 37.27 4.39 -4.45 INFO 2019-06-11 02:54:45,472Z lrauvNc4ToNetcdf.py nudge_coords():631 5: 0.343 -0.0000870 0.0000860 387 2.98 -5.28 5.35 INFO 2019-06-11 02:54:45,478Z lrauvNc4ToNetcdf.py nudge_coords():631 6: 0.365 -0.0003084 -0.0005236 5452 36.72 2.60 -2.64 INFO 2019-06-11 02:54:45,485Z lrauvNc4ToNetcdf.py nudge_coords():631 7: 0.330 -0.0000382 0.0000592 405 2.99 -3.61 3.67 INFO 2019-06-11 02:54:45,492Z lrauvNc4ToNetcdf.py nudge_coords():631 8: 0.353 -0.0012414 -0.0020989 4572 30.78 12.45 -12.64 INFO 2019-06-11 02:54:45,499Z lrauvNc4ToNetcdf.py nudge_coords():631 9: 0.378 -0.0000097 0.0000625 407 3.05 -3.74 3.79 INFO 2019-06-11 02:54:45,505Z lrauvNc4ToNetcdf.py nudge_coords():631 10: 0.366 -0.0014036 -0.0017673 5170 34.82 9.28 -9.40 INFO 2019-06-11 02:54:45,512Z lrauvNc4ToNetcdf.py nudge_coords():631 11: 0.358 0.0001822 0.0000682 420 3.14 -3.97 4.02 INFO 2019-06-11 02:54:45,519Z lrauvNc4ToNetcdf.py nudge_coords():631 12: 0.359 -0.0045644 -0.0018622 5760 38.80 8.77 -8.89 INFO 2019-06-11 02:54:45,526Z lrauvNc4ToNetcdf.py nudge_coords():631 13: 0.339 -0.0003003 0.0000006 1052 7.22 -0.01 0.01 INFO 2019-06-11 02:54:45,532Z lrauvNc4ToNetcdf.py nudge_coords():631 14: 0.359 -0.0000580 0.0000048 220 1.48 -0.60 0.61 INFO 2019-06-11 02:54:45,539Z lrauvNc4ToNetcdf.py nudge_coords():631 15: 0.373 -0.0040733 -0.0020850 5305 35.72 10.65 -10.82 INFO 2019-06-11 02:54:45,546Z lrauvNc4ToNetcdf.py nudge_coords():631 16: 0.344 -0.0000828 0.0000727 344 2.58 -5.14 5.22 INFO 2019-06-11 02:54:45,552Z lrauvNc4ToNetcdf.py nudge_coords():631 17: 0.363 -0.0007605 -0.0034143 5585 37.61 16.57 -16.82 INFO 2019-06-11 02:54:45,559Z lrauvNc4ToNetcdf.py nudge_coords():631 18: 0.367 0.0000687 -0.0000520 366 2.75 3.46 -3.51 INFO 2019-06-11 02:54:45,566Z lrauvNc4ToNetcdf.py nudge_coords():631 19: 0.363 -0.0000247 -0.0000018 116 0.78 0.43 -0.44 INFO 2019-06-11 02:54:45,572Z lrauvNc4ToNetcdf.py nudge_coords():631 20: 0.353 -0.0000630 0.0000786 587 3.95 -3.63 3.69 INFO 2019-06-11 02:54:45,578Z lrauvNc4ToNetcdf.py nudge_coords():631 21: 0.359 -0.0000193 0.0000258 178 1.20 -3.94 4.00 INFO 2019-06-11 02:54:45,585Z lrauvNc4ToNetcdf.py nudge_coords():631 22: 0.373 -0.0021624 -0.0017786 8282 55.77 5.82 -5.91 INFO 2019-06-11 02:54:45,592Z lrauvNc4ToNetcdf.py nudge_coords():631 23: 0.340 -0.0000272 -0.0000008 75 0.51 0.30 -0.30 INFO 2019-06-11 02:54:45,599Z lrauvNc4ToNetcdf.py nudge_coords():631 24: 0.347 -0.0021589 -0.0013091 6110 41.15 5.81 -5.89 INFO 2019-06-11 02:54:45,606Z lrauvNc4ToNetcdf.py nudge_coords():631 25: 0.361 -0.0000188 -0.0000265 154 1.15 4.19 -4.25 INFO 2019-06-11 02:54:45,612Z lrauvNc4ToNetcdf.py nudge_coords():631 26: 0.331 -0.0023362 -0.0013842 5829 39.26 6.44 -6.53 INFO 2019-06-11 02:54:45,620Z lrauvNc4ToNetcdf.py nudge_coords():631 27: 0.361 -0.0000032 0.0000002 403 3.05 -0.01 0.01 INFO 2019-06-11 02:54:45,626Z lrauvNc4ToNetcdf.py nudge_coords():631 28: 0.374 -0.0024698 -0.0014712 5805 39.10 6.87 -6.97 INFO 2019-06-11 02:54:45,633Z lrauvNc4ToNetcdf.py nudge_coords():631 29: 0.368 -0.0001343 0.0000103 430 3.13 -0.60 0.61 INFO 2019-06-11 02:54:45,640Z lrauvNc4ToNetcdf.py nudge_coords():631 30: 0.374 -0.0026885 -0.0014092 5981 40.28 6.39 -6.48 INFO 2019-06-11 02:54:45,647Z lrauvNc4ToNetcdf.py nudge_coords():631 31: 0.363 -0.0001908 0.0000273 270 2.00 -2.50 2.54 INFO 2019-06-11 02:54:45,654Z lrauvNc4ToNetcdf.py nudge_coords():631 32: 0.346 -0.0027041 -0.0012651 5809 39.13 5.91 -5.99 INFO 2019-06-11 02:54:45,661Z lrauvNc4ToNetcdf.py nudge_coords():631 33: 0.346 -0.0002785 0.0000033 413 3.03 -0.20 0.20 INFO 2019-06-11 02:54:45,668Z lrauvNc4ToNetcdf.py nudge_coords():631 34: 0.360 -0.0000204 0.0000024 32 0.25 -1.77 1.80 INFO 2019-06-11 02:54:45,674Z lrauvNc4ToNetcdf.py nudge_coords():631 35: 0.337 -0.0003612 0.0000097 442 2.97 -0.59 0.60 INFO 2019-06-11 02:54:45,680Z lrauvNc4ToNetcdf.py nudge_coords():631 36: 0.368 -0.0047282 -0.0029428 5636 37.95 14.16 -14.37 INFO 2019-06-11 02:54:45,688Z lrauvNc4ToNetcdf.py nudge_coords():631 37: 0.361 -0.0006870 0.0000262 439 3.16 -1.51 1.53 INFO 2019-06-11 02:54:45,694Z lrauvNc4ToNetcdf.py nudge_coords():631 38: 0.397 -0.0012899 -0.0028539 6344 42.73 12.20 -12.38 INFO 2019-06-11 02:54:45,702Z lrauvNc4ToNetcdf.py nudge_coords():631 39: 0.364 -0.0001555 0.0000022 115 0.78 -0.51 0.52 INFO 2019-06-11 02:54:45,708Z lrauvNc4ToNetcdf.py nudge_coords():631 40: 0.324 -0.0085903 -0.0022631 7879 53.06 7.79 -7.90 INFO 2019-06-11 02:54:45,716Z lrauvNc4ToNetcdf.py nudge_coords():631 41: 0.345 -0.0001935 -0.0001185 108 0.72 29.92 -30.36 INFO 2019-06-11 02:54:45,722Z lrauvNc4ToNetcdf.py nudge_coords():631 42: 0.364 -0.0153076 -0.0011828 10613 71.48 3.02 -3.07 INFO 2019-06-11 02:54:45,730Z lrauvNc4ToNetcdf.py nudge_coords():631 43: 0.344 -0.0014012 0.0001405 701 4.71 -5.44 5.52 INFO 2019-06-11 02:54:45,737Z lrauvNc4ToNetcdf.py nudge_coords():631 44: 0.380 -0.0006303 0.0000642 314 2.11 -5.56 5.64 INFO 2019-06-11 02:54:45,744Z lrauvNc4ToNetcdf.py nudge_coords():631 45: 0.364 -0.0015884 -0.0000399 5323 35.88 0.20 -0.21 INFO 2019-06-11 02:54:45,752Z lrauvNc4ToNetcdf.py nudge_coords():631 46: 0.373 -0.0000600 0.0000098 38 0.25 -7.23 7.31 INFO 2019-06-11 02:54:45,759Z lrauvNc4ToNetcdf.py nudge_coords():631 47: 0.365 -0.0016345 0.0002117 951 6.52 -5.95 6.02 INFO 2019-06-11 02:54:45,765Z lrauvNc4ToNetcdf.py nudge_coords():661 49: - - - 786 5.29 - - INFO 2019-06-11 02:54:45,766Z lrauvNc4ToNetcdf.py nudge_coords():665 Points in final series = 132536 INFO 2019-06-11 02:54:45,784Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():499 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20190606T141829/20190607T073020/data.csv INFO 2019-06-11 02:54:45,804Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():522 Found 0 position values from the Tracking database INFO 2019-06-11 02:54:45,815Z lrauvNc4ToNetcdf.py processResampleNc4File():1066 ['control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'chromophoric_dissolved_organic_matter', 'chlorophyll', 'VolumeScatCoeff117deg700nm', 'petroleum_hydrocarbons', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_battery_charge', 'health_platform_average_voltage', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2019-06-11 02:54:46,371Z lrauvNc4ToNetcdf.py processResampleNc4File():1069 Wrote /mbari/LRAUV/whoidhs/missionlogs/2019/20190603_20190608/20190606T151829/201906061518_201906070630_2S_scieng.nc