INFO 2019-06-18 00:05:59,633Z lrauvNc4ToNetcdf.py processResampleNc4File():930 Reading /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190610T170954/201906101709_201906102355.nc4 file... INFO 2019-06-18 00:05:59,633Z lrauvNc4ToNetcdf.py processResampleNc4File():931 After copying to /tmp/201906101709_201906102355.nc4 INFO 2019-06-18 00:06:00,539Z lrauvNc4ToNetcdf.py processResampleNc4File():933 Read file /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190610T170954/201906101709_201906102355.nc4 INFO 2019-06-18 00:06:18,149Z lrauvNc4ToNetcdf.py processResampleNc4File():938 Creating t variable of the time indexes WARNING 2019-06-18 00:06:18,165Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190610T170954/201906101709_201906102355.nc4 INFO 2019-06-18 00:06:18,253Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position WARNING 2019-06-18 00:06:18,254Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190610T170954/201906101709_201906102355.nc4 WARNING 2019-06-18 00:06:18,254Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190610T170954/201906101709_201906102355.nc4 WARNING 2019-06-18 00:06:18,254Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190610T170954/201906101709_201906102355.nc4 WARNING 2019-06-18 00:06:18,254Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190610T170954/201906101709_201906102355.nc4 INFO 2019-06-18 00:06:18,398Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle WARNING 2019-06-18 00:06:18,398Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190610T170954/201906101709_201906102355.nc4 INFO 2019-06-18 00:06:18,427Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2019-06-18 00:06:18,432Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2019-06-18 00:06:18,437Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2019-06-18 00:06:18,442Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude WARNING 2019-06-18 00:06:18,442Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'downwelling_photosynthetic_photon_flux_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190610T170954/201906101709_201906102355.nc4 INFO 2019-06-18 00:06:18,598Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2019-06-18 00:06:19,551Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate WARNING 2019-06-18 00:06:19,552Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mass_concentration_of_chlorophyll_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190610T170954/201906101709_201906102355.nc4 WARNING 2019-06-18 00:06:19,552Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'Output470' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190610T170954/201906101709_201906102355.nc4 WARNING 2019-06-18 00:06:19,552Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'Output650' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190610T170954/201906101709_201906102355.nc4 INFO 2019-06-18 00:06:19,974Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter concentration_of_chromophoric_dissolved_organic_matter_in_sea_water renaming to chromophoric_dissolved_organic_matter INFO 2019-06-18 00:06:20,395Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2019-06-18 00:06:20,396Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable BackscatteringCoeff700nm empty so skipping INFO 2019-06-18 00:06:20,814Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter VolumeScatCoeff117deg700nm renaming to VolumeScatCoeff117deg700nm INFO 2019-06-18 00:06:21,234Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_petroleum_hydrocarbons_in_sea_water renaming to petroleum_hydrocarbons INFO 2019-06-18 00:06:21,239Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2019-06-18 00:06:22,379Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2019-06-18 00:06:23,517Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2019-06-18 00:06:24,654Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources WARNING 2019-06-18 00:06:24,654Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'fix_residual_percent_distance_traveled' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190610T170954/201906101709_201906102355.nc4 WARNING 2019-06-18 00:06:24,654Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'longitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190610T170954/201906101709_201906102355.nc4 WARNING 2019-06-18 00:06:24,654Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'latitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190610T170954/201906101709_201906102355.nc4 WARNING 2019-06-18 00:06:24,654Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'depth' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190610T170954/201906101709_201906102355.nc4 INFO 2019-06-18 00:06:24,663Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2019-06-18 00:06:24,669Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage WARNING 2019-06-18 00:06:24,669Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'platform_average_current' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190610T170954/201906101709_201906102355.nc4 INFO 2019-06-18 00:06:25,776Z lrauvNc4ToNetcdf.py createNav():458 platform_pitch_angle -> pitch: {'units': 'rad', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-06-18 00:06:26,877Z lrauvNc4ToNetcdf.py createNav():458 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-06-18 00:06:27,984Z lrauvNc4ToNetcdf.py createNav():458 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-06-18 00:06:27,997Z lrauvNc4ToNetcdf.py nudge_coords():575 /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190610T170954/201906101709_201906102355.nc4 INFO 2019-06-18 00:06:29,481Z lrauvNc4ToNetcdf.py nudge_coords():593 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) INFO 2019-06-18 00:06:29,501Z lrauvNc4ToNetcdf.py nudge_coords():609 - - - 201 1.35 - - INFO 2019-06-18 00:06:29,533Z lrauvNc4ToNetcdf.py nudge_coords():631 0: 0.345 0.0001063 0.0000448 670 4.51 -1.82 1.84 INFO 2019-06-18 00:06:29,541Z lrauvNc4ToNetcdf.py nudge_coords():631 1: 0.344 0.0001763 -0.0000316 1571 10.65 0.54 -0.55 INFO 2019-06-18 00:06:29,547Z lrauvNc4ToNetcdf.py nudge_coords():631 2: 0.363 -0.0000048 0.0000023 79 0.55 -0.79 0.79 INFO 2019-06-18 00:06:29,553Z lrauvNc4ToNetcdf.py nudge_coords():631 3: 0.357 0.0006357 -0.0003293 1564 10.55 5.72 -5.78 INFO 2019-06-18 00:06:29,560Z lrauvNc4ToNetcdf.py nudge_coords():631 4: 0.365 -0.0000070 0.0000069 552 3.72 -0.34 0.34 INFO 2019-06-18 00:06:29,566Z lrauvNc4ToNetcdf.py nudge_coords():631 5: 0.354 0.0005091 -0.0002307 1628 10.96 3.86 -3.90 INFO 2019-06-18 00:06:29,572Z lrauvNc4ToNetcdf.py nudge_coords():631 6: 0.357 -0.0000039 0.0000186 577 3.88 -0.88 0.89 INFO 2019-06-18 00:06:29,579Z lrauvNc4ToNetcdf.py nudge_coords():631 7: 0.375 0.0003001 -0.0000850 1600 10.77 1.45 -1.46 INFO 2019-06-18 00:06:29,585Z lrauvNc4ToNetcdf.py nudge_coords():631 8: 0.377 0.0000110 0.0000214 547 3.69 -1.06 1.07 INFO 2019-06-18 00:06:29,591Z lrauvNc4ToNetcdf.py nudge_coords():631 9: 0.366 0.0002384 -0.0000305 1626 10.94 0.51 -0.52 INFO 2019-06-18 00:06:29,598Z lrauvNc4ToNetcdf.py nudge_coords():631 10: 0.351 -0.0000436 0.0000278 660 4.44 -1.15 1.16 INFO 2019-06-18 00:06:29,604Z lrauvNc4ToNetcdf.py nudge_coords():631 11: 0.369 -0.0000027 0.0000119 103 0.70 -3.12 3.16 INFO 2019-06-18 00:06:29,610Z lrauvNc4ToNetcdf.py nudge_coords():631 12: 0.366 0.0012291 -0.0005833 3970 26.74 3.99 -4.04 INFO 2019-06-18 00:06:29,617Z lrauvNc4ToNetcdf.py nudge_coords():631 13: 0.329 -0.0000260 0.0005220 508 3.47 -27.54 27.90 INFO 2019-06-18 00:06:29,623Z lrauvNc4ToNetcdf.py nudge_coords():631 14: 0.393 0.0009649 0.0000735 4485 30.20 -0.45 0.45 INFO 2019-06-18 00:06:29,630Z lrauvNc4ToNetcdf.py nudge_coords():631 15: 0.357 0.0000358 0.0003620 500 3.38 -19.61 19.86 INFO 2019-06-18 00:06:29,636Z lrauvNc4ToNetcdf.py nudge_coords():631 16: 0.353 0.0004269 -0.0001281 4470 30.11 0.78 -0.79 INFO 2019-06-18 00:06:29,642Z lrauvNc4ToNetcdf.py nudge_coords():631 17: 0.312 0.0000101 0.0001062 439 2.96 -6.57 6.66 INFO 2019-06-18 00:06:29,649Z lrauvNc4ToNetcdf.py nudge_coords():631 18: 0.348 -0.0003057 -0.0004480 4195 28.26 2.90 -2.94 INFO 2019-06-18 00:06:29,655Z lrauvNc4ToNetcdf.py nudge_coords():631 19: 0.373 -0.0000714 0.0003051 695 4.68 -11.93 12.09 INFO 2019-06-18 00:06:29,661Z lrauvNc4ToNetcdf.py nudge_coords():631 20: 0.355 -0.0000195 0.0000505 177 1.21 -7.64 7.74 INFO 2019-06-18 00:06:29,668Z lrauvNc4ToNetcdf.py nudge_coords():631 21: 0.313 -0.0002678 -0.0005517 4349 29.28 3.44 -3.49 INFO 2019-06-18 00:06:29,674Z lrauvNc4ToNetcdf.py nudge_coords():631 22: 0.297 -0.0001263 0.0001053 338 2.29 -8.41 8.52 INFO 2019-06-18 00:06:29,680Z lrauvNc4ToNetcdf.py nudge_coords():631 23: 0.375 0.0004378 0.0003508 4503 30.33 -2.11 2.14 INFO 2019-06-18 00:06:29,687Z lrauvNc4ToNetcdf.py nudge_coords():631 24: 0.335 -0.0000432 0.0005125 503 3.41 -27.46 27.88 INFO 2019-06-18 00:06:29,693Z lrauvNc4ToNetcdf.py nudge_coords():631 25: 0.374 -0.0005595 0.0007980 4660 31.38 -4.65 4.71 INFO 2019-06-18 00:06:29,700Z lrauvNc4ToNetcdf.py nudge_coords():631 26: 0.369 -0.0000177 0.0001320 201 1.35 -17.84 18.08 INFO 2019-06-18 00:06:29,706Z lrauvNc4ToNetcdf.py nudge_coords():631 27: 0.366 0.0008610 0.0009932 4671 31.46 -5.78 5.85 INFO 2019-06-18 00:06:29,713Z lrauvNc4ToNetcdf.py nudge_coords():631 28: 0.369 0.0000296 -0.0000110 34 0.23 8.84 -8.94 INFO 2019-06-18 00:06:29,719Z lrauvNc4ToNetcdf.py nudge_coords():631 29: 0.368 0.0000934 0.0003894 4183 28.17 -2.53 2.56 INFO 2019-06-18 00:06:29,726Z lrauvNc4ToNetcdf.py nudge_coords():631 30: 0.363 0.0000012 0.0000317 31 0.21 -27.78 28.08 INFO 2019-06-18 00:06:29,732Z lrauvNc4ToNetcdf.py nudge_coords():631 31: 0.374 0.0006181 0.0007394 4447 29.95 -4.52 4.57 INFO 2019-06-18 00:06:29,739Z lrauvNc4ToNetcdf.py nudge_coords():631 32: 0.350 -0.0000328 0.0000173 38 0.25 -12.73 12.87 INFO 2019-06-18 00:06:29,745Z lrauvNc4ToNetcdf.py nudge_coords():631 33: 0.359 -0.0001040 0.0004143 775 5.22 -14.56 14.72 INFO 2019-06-18 00:06:29,751Z lrauvNc4ToNetcdf.py nudge_coords():661 35: - - - 455 3.73 - - INFO 2019-06-18 00:06:29,751Z lrauvNc4ToNetcdf.py nudge_coords():665 Points in final series = 60005 INFO 2019-06-18 00:06:29,768Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():499 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20190610T160954/20190611T005506/data.csv INFO 2019-06-18 00:06:29,800Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():522 Found 0 position values from the Tracking database INFO 2019-06-18 00:06:29,807Z lrauvNc4ToNetcdf.py processResampleNc4File():1066 ['control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'chromophoric_dissolved_organic_matter', 'chlorophyll', 'VolumeScatCoeff117deg700nm', 'petroleum_hydrocarbons', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_battery_charge', 'health_platform_average_voltage', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2019-06-18 00:06:30,598Z lrauvNc4ToNetcdf.py processResampleNc4File():1069 Wrote /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190610T170954/201906101709_201906102355_2S_scieng.nc