INFO 2019-06-18 00:07:06,991Z lrauvNc4ToNetcdf.py processResampleNc4File():930 Reading /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T061207/201906110612_201906111454.nc4 file... INFO 2019-06-18 00:07:06,991Z lrauvNc4ToNetcdf.py processResampleNc4File():931 After copying to /tmp/201906110612_201906111454.nc4 INFO 2019-06-18 00:07:08,224Z lrauvNc4ToNetcdf.py processResampleNc4File():933 Read file /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T061207/201906110612_201906111454.nc4 INFO 2019-06-18 00:07:31,111Z lrauvNc4ToNetcdf.py processResampleNc4File():938 Creating t variable of the time indexes WARNING 2019-06-18 00:07:31,129Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T061207/201906110612_201906111454.nc4 INFO 2019-06-18 00:07:31,327Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position WARNING 2019-06-18 00:07:31,327Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T061207/201906110612_201906111454.nc4 WARNING 2019-06-18 00:07:31,328Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T061207/201906110612_201906111454.nc4 WARNING 2019-06-18 00:07:31,328Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T061207/201906110612_201906111454.nc4 WARNING 2019-06-18 00:07:31,328Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T061207/201906110612_201906111454.nc4 INFO 2019-06-18 00:07:31,412Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle WARNING 2019-06-18 00:07:31,412Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T061207/201906110612_201906111454.nc4 INFO 2019-06-18 00:07:31,448Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2019-06-18 00:07:31,453Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2019-06-18 00:07:31,459Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2019-06-18 00:07:31,464Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude WARNING 2019-06-18 00:07:31,464Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'downwelling_photosynthetic_photon_flux_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T061207/201906110612_201906111454.nc4 INFO 2019-06-18 00:07:31,638Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2019-06-18 00:07:32,642Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate WARNING 2019-06-18 00:07:32,642Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mass_concentration_of_chlorophyll_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T061207/201906110612_201906111454.nc4 WARNING 2019-06-18 00:07:32,642Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'Output470' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T061207/201906110612_201906111454.nc4 WARNING 2019-06-18 00:07:32,642Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'Output650' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T061207/201906110612_201906111454.nc4 INFO 2019-06-18 00:07:32,644Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable concentration_of_chromophoric_dissolved_organic_matter_in_sea_water empty so skipping INFO 2019-06-18 00:07:32,645Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2019-06-18 00:07:32,647Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable BackscatteringCoeff700nm empty so skipping INFO 2019-06-18 00:07:32,648Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable VolumeScatCoeff117deg700nm empty so skipping INFO 2019-06-18 00:07:32,650Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable mass_concentration_of_petroleum_hydrocarbons_in_sea_water empty so skipping INFO 2019-06-18 00:07:32,655Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2019-06-18 00:07:34,127Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2019-06-18 00:07:35,574Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2019-06-18 00:07:37,018Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources WARNING 2019-06-18 00:07:37,019Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'fix_residual_percent_distance_traveled' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T061207/201906110612_201906111454.nc4 WARNING 2019-06-18 00:07:37,019Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'longitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T061207/201906110612_201906111454.nc4 WARNING 2019-06-18 00:07:37,019Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'latitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T061207/201906110612_201906111454.nc4 WARNING 2019-06-18 00:07:37,019Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'depth' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T061207/201906110612_201906111454.nc4 INFO 2019-06-18 00:07:37,029Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2019-06-18 00:07:37,035Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage WARNING 2019-06-18 00:07:37,035Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'platform_average_current' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T061207/201906110612_201906111454.nc4 INFO 2019-06-18 00:07:38,454Z lrauvNc4ToNetcdf.py createNav():458 platform_pitch_angle -> pitch: {'units': 'rad', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-06-18 00:07:39,888Z lrauvNc4ToNetcdf.py createNav():458 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-06-18 00:07:41,325Z lrauvNc4ToNetcdf.py createNav():458 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-06-18 00:07:41,328Z lrauvNc4ToNetcdf.py nudge_coords():575 /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T061207/201906110612_201906111454.nc4 INFO 2019-06-18 00:07:43,240Z lrauvNc4ToNetcdf.py nudge_coords():593 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) INFO 2019-06-18 00:07:43,242Z lrauvNc4ToNetcdf.py nudge_coords():609 - - - 351 2.36 - - INFO 2019-06-18 00:07:43,251Z lrauvNc4ToNetcdf.py nudge_coords():631 0: 0.373 -0.0006305 -0.0000330 861 5.79 1.04 -1.06 INFO 2019-06-18 00:07:43,258Z lrauvNc4ToNetcdf.py nudge_coords():631 1: 0.356 -0.0004633 -0.0000955 755 5.08 3.45 -3.49 INFO 2019-06-18 00:07:43,264Z lrauvNc4ToNetcdf.py nudge_coords():631 2: 0.358 -0.0005257 -0.0000083 808 5.44 0.28 -0.28 INFO 2019-06-18 00:07:43,270Z lrauvNc4ToNetcdf.py nudge_coords():631 3: 0.362 -0.0005080 -0.0000225 825 5.55 0.74 -0.75 INFO 2019-06-18 00:07:43,277Z lrauvNc4ToNetcdf.py nudge_coords():631 4: 0.369 -0.0004988 -0.0001303 804 5.41 4.41 -4.46 INFO 2019-06-18 00:07:43,283Z lrauvNc4ToNetcdf.py nudge_coords():631 5: 0.373 -0.0005202 -0.0001430 810 5.45 4.81 -4.86 INFO 2019-06-18 00:07:43,290Z lrauvNc4ToNetcdf.py nudge_coords():631 6: 0.369 -0.0005067 -0.0001497 804 5.41 5.07 -5.13 INFO 2019-06-18 00:07:43,296Z lrauvNc4ToNetcdf.py nudge_coords():631 7: 0.377 -0.0005580 -0.0001455 807 5.43 4.91 -4.97 INFO 2019-06-18 00:07:43,302Z lrauvNc4ToNetcdf.py nudge_coords():631 8: 0.364 -0.0005158 -0.0001700 804 5.41 5.76 -5.83 INFO 2019-06-18 00:07:43,308Z lrauvNc4ToNetcdf.py nudge_coords():631 9: 0.359 -0.0004888 -0.0001592 806 5.42 5.38 -5.44 INFO 2019-06-18 00:07:43,315Z lrauvNc4ToNetcdf.py nudge_coords():631 10: 0.369 -0.0005470 -0.0001697 808 5.44 5.72 -5.78 INFO 2019-06-18 00:07:43,321Z lrauvNc4ToNetcdf.py nudge_coords():631 11: 0.370 -0.0005625 -0.0001550 803 5.40 5.25 -5.31 INFO 2019-06-18 00:07:43,327Z lrauvNc4ToNetcdf.py nudge_coords():631 12: 0.374 -0.0005872 -0.0001945 810 5.45 6.54 -6.62 INFO 2019-06-18 00:07:43,333Z lrauvNc4ToNetcdf.py nudge_coords():631 13: 0.369 -0.0006642 -0.0002008 804 5.41 6.80 -6.88 INFO 2019-06-18 00:07:43,340Z lrauvNc4ToNetcdf.py nudge_coords():631 14: 0.373 -0.0006532 -0.0001445 804 5.41 4.89 -4.95 INFO 2019-06-18 00:07:43,346Z lrauvNc4ToNetcdf.py nudge_coords():631 15: 0.358 -0.0006548 -0.0001627 804 5.41 5.50 -5.57 INFO 2019-06-18 00:07:43,352Z lrauvNc4ToNetcdf.py nudge_coords():631 16: 0.368 -0.0006700 -0.0001655 809 5.44 5.57 -5.63 INFO 2019-06-18 00:07:43,358Z lrauvNc4ToNetcdf.py nudge_coords():631 17: 0.360 -0.0006990 -0.0001560 805 5.42 5.28 -5.34 INFO 2019-06-18 00:07:43,365Z lrauvNc4ToNetcdf.py nudge_coords():631 18: 0.358 -0.0004867 -0.0000890 539 3.63 4.50 -4.55 INFO 2019-06-18 00:07:43,371Z lrauvNc4ToNetcdf.py nudge_coords():631 19: 0.368 -0.0000850 -0.0000300 103 0.69 7.97 -8.06 INFO 2019-06-18 00:07:43,377Z lrauvNc4ToNetcdf.py nudge_coords():631 20: 0.372 -0.0000732 -0.0009790 4008 27.01 6.64 -6.72 INFO 2019-06-18 00:07:43,384Z lrauvNc4ToNetcdf.py nudge_coords():631 21: 0.364 -0.0001632 -0.0000077 160 1.07 1.31 -1.32 INFO 2019-06-18 00:07:43,390Z lrauvNc4ToNetcdf.py nudge_coords():631 22: 0.349 -0.0014436 -0.0027123 4285 28.88 17.20 -17.40 INFO 2019-06-18 00:07:43,397Z lrauvNc4ToNetcdf.py nudge_coords():631 23: 0.368 -0.0000667 -0.0000103 63 0.43 4.45 -4.50 INFO 2019-06-18 00:07:43,403Z lrauvNc4ToNetcdf.py nudge_coords():631 24: 0.381 -0.0005640 -0.0028355 3673 24.76 20.98 -21.22 INFO 2019-06-18 00:07:43,410Z lrauvNc4ToNetcdf.py nudge_coords():631 25: 0.365 -0.0003702 -0.0000992 434 2.92 6.22 -6.29 INFO 2019-06-18 00:07:43,417Z lrauvNc4ToNetcdf.py nudge_coords():631 26: 0.382 -0.0002684 -0.0027729 3821 25.74 19.73 -19.96 INFO 2019-06-18 00:07:43,423Z lrauvNc4ToNetcdf.py nudge_coords():631 27: 0.331 -0.0003807 -0.0000808 320 2.15 6.88 -6.96 INFO 2019-06-18 00:07:43,430Z lrauvNc4ToNetcdf.py nudge_coords():631 28: 0.359 -0.0002932 -0.0024210 3716 25.03 17.72 -17.92 INFO 2019-06-18 00:07:43,436Z lrauvNc4ToNetcdf.py nudge_coords():631 29: 0.368 -0.0006193 -0.0001570 444 2.99 9.63 -9.74 INFO 2019-06-18 00:07:43,443Z lrauvNc4ToNetcdf.py nudge_coords():631 30: 0.364 -0.0002760 -0.0027881 3679 24.79 20.60 -20.84 INFO 2019-06-18 00:07:43,450Z lrauvNc4ToNetcdf.py nudge_coords():631 31: 0.369 -0.0005057 -0.0000640 431 2.90 4.04 -4.09 INFO 2019-06-18 00:07:43,456Z lrauvNc4ToNetcdf.py nudge_coords():631 32: 0.354 -0.0002540 -0.0027968 3627 24.44 20.96 -21.20 INFO 2019-06-18 00:07:43,463Z lrauvNc4ToNetcdf.py nudge_coords():631 33: 0.365 -0.0004442 -0.0001597 481 3.24 9.04 -9.14 INFO 2019-06-18 00:07:43,469Z lrauvNc4ToNetcdf.py nudge_coords():631 34: 0.359 -0.0002019 -0.0028967 3618 24.40 21.75 -22.00 INFO 2019-06-18 00:07:43,476Z lrauvNc4ToNetcdf.py nudge_coords():631 35: 0.360 -0.0005525 -0.0001815 491 3.30 10.06 -10.18 INFO 2019-06-18 00:07:43,482Z lrauvNc4ToNetcdf.py nudge_coords():631 36: 0.369 -0.0006071 -0.0031507 4287 28.89 19.98 -20.21 INFO 2019-06-18 00:07:43,489Z lrauvNc4ToNetcdf.py nudge_coords():631 37: 0.350 -0.0000708 -0.0000187 72 0.49 7.05 -7.13 INFO 2019-06-18 00:07:43,495Z lrauvNc4ToNetcdf.py nudge_coords():631 38: 0.377 -0.0004504 -0.0027725 3874 26.12 19.44 -19.67 INFO 2019-06-18 00:07:43,502Z lrauvNc4ToNetcdf.py nudge_coords():631 39: 0.347 -0.0002598 -0.0000678 221 1.48 8.38 -8.48 INFO 2019-06-18 00:07:43,508Z lrauvNc4ToNetcdf.py nudge_coords():631 40: 0.364 -0.0004798 -0.0031986 3954 26.65 21.98 -22.24 INFO 2019-06-18 00:07:43,515Z lrauvNc4ToNetcdf.py nudge_coords():631 41: 0.345 -0.0001792 -0.0000505 161 1.08 8.56 -8.66 INFO 2019-06-18 00:07:43,521Z lrauvNc4ToNetcdf.py nudge_coords():631 42: 0.349 -0.0002393 -0.0026146 3818 25.73 18.62 -18.83 INFO 2019-06-18 00:07:43,528Z lrauvNc4ToNetcdf.py nudge_coords():631 43: 0.369 -0.0002633 -0.0000273 303 2.04 2.46 -2.49 INFO 2019-06-18 00:07:43,535Z lrauvNc4ToNetcdf.py nudge_coords():631 44: 0.368 -0.0001248 -0.0027664 3777 25.46 19.90 -20.13 INFO 2019-06-18 00:07:43,542Z lrauvNc4ToNetcdf.py nudge_coords():631 45: 0.373 -0.0003873 -0.0000603 361 2.43 4.56 -4.61 INFO 2019-06-18 00:07:43,548Z lrauvNc4ToNetcdf.py nudge_coords():631 46: 0.353 -0.0009133 -0.0030998 4208 28.36 20.02 -20.25 INFO 2019-06-18 00:07:43,555Z lrauvNc4ToNetcdf.py nudge_coords():631 47: 0.357 -0.0001183 -0.0000182 84 0.56 5.89 -5.96 INFO 2019-06-18 00:07:43,561Z lrauvNc4ToNetcdf.py nudge_coords():661 49: - - - 3591 24.21 - - INFO 2019-06-18 00:07:43,562Z lrauvNc4ToNetcdf.py nudge_coords():665 Points in final series = 77135 INFO 2019-06-18 00:07:43,582Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():499 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20190611T051207/20190611T155425/data.csv INFO 2019-06-18 00:07:43,613Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():522 Found 0 position values from the Tracking database INFO 2019-06-18 00:07:43,620Z lrauvNc4ToNetcdf.py processResampleNc4File():1066 ['control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_battery_charge', 'health_platform_average_voltage', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2019-06-18 00:07:43,800Z lrauvNc4ToNetcdf.py processResampleNc4File():1069 Wrote /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T061207/201906110612_201906111454_2S_scieng.nc