INFO 2019-06-18 00:12:51,772Z lrauvNc4ToNetcdf.py processResampleNc4File():930 Reading /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T183144/201906111831_201906111842.nc4 file...
INFO 2019-06-18 00:12:51,773Z lrauvNc4ToNetcdf.py processResampleNc4File():931 After copying to /tmp/201906111831_201906111842.nc4
INFO 2019-06-18 00:12:53,084Z lrauvNc4ToNetcdf.py processResampleNc4File():933 Read file /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T183144/201906111831_201906111842.nc4
INFO 2019-06-18 00:12:53,738Z lrauvNc4ToNetcdf.py processResampleNc4File():938 Creating t variable of the time indexes
WARNING 2019-06-18 00:12:53,757Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T183144/201906111831_201906111842.nc4
INFO 2019-06-18 00:12:53,759Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable sea_water_salinity empty so skipping
INFO 2019-06-18 00:12:53,760Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable sea_water_temperature empty so skipping
WARNING 2019-06-18 00:12:53,760Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T183144/201906111831_201906111842.nc4
WARNING 2019-06-18 00:12:53,760Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T183144/201906111831_201906111842.nc4
WARNING 2019-06-18 00:12:53,761Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T183144/201906111831_201906111842.nc4
WARNING 2019-06-18 00:12:53,761Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'downwelling_photosynthetic_photon_flux_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T183144/201906111831_201906111842.nc4
WARNING 2019-06-18 00:12:53,761Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mass_concentration_of_chlorophyll_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T183144/201906111831_201906111842.nc4
WARNING 2019-06-18 00:12:53,761Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'Output470' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T183144/201906111831_201906111842.nc4
WARNING 2019-06-18 00:12:53,761Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'Output650' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T183144/201906111831_201906111842.nc4
INFO 2019-06-18 00:12:53,766Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter concentration_of_chromophoric_dissolved_organic_matter_in_sea_water renaming to chromophoric_dissolved_organic_matter
INFO 2019-06-18 00:12:53,770Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll
INFO 2019-06-18 00:12:53,771Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable BackscatteringCoeff700nm empty so skipping
INFO 2019-06-18 00:12:53,775Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter VolumeScatCoeff117deg700nm renaming to VolumeScatCoeff117deg700nm
INFO 2019-06-18 00:12:53,779Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_petroleum_hydrocarbons_in_sea_water renaming to petroleum_hydrocarbons
INFO 2019-06-18 00:12:53,780Z lrauvNc4ToNetcdf.py nudge_coords():575 /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T183144/201906111831_201906111842.nc4
INFO 2019-06-18 00:12:53,937Z lrauvNc4ToNetcdf.py nudge_coords():593 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s)
INFO 2019-06-18 00:12:53,945Z lrauvNc4ToNetcdf.py nudge_coords():609                  -            -            -         0    0.00              -              -
INFO 2019-06-18 00:12:53,949Z lrauvNc4ToNetcdf.py nudge_coords():631    0:        0.361   -0.0008207    0.0007928       657    4.48         -32.41          32.76
INFO 2019-06-18 00:12:54,070Z lrauvNc4ToNetcdf.py nudge_coords():661    2:            -            -            -       651    4.38              -              -
INFO 2019-06-18 00:12:54,070Z lrauvNc4ToNetcdf.py nudge_coords():665 Points in final series = 1308
INFO 2019-06-18 00:12:54,085Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():499 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20190611T173156/20190611T194232/data.csv
INFO 2019-06-18 00:12:54,144Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():522 Found 0 position values from the Tracking database
INFO 2019-06-18 00:12:54,147Z lrauvNc4ToNetcdf.py processResampleNc4File():1066 ['chromophoric_dissolved_organic_matter', 'chlorophyll', 'VolumeScatCoeff117deg700nm', 'petroleum_hydrocarbons', 'latitude', 'longitude', 'depth', 'time']
INFO 2019-06-18 00:12:54,239Z lrauvNc4ToNetcdf.py processResampleNc4File():1069 Wrote /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T183144/201906111831_201906111842_10S_sci.nc