INFO 2019-06-18 00:12:54,731Z lrauvNc4ToNetcdf.py processResampleNc4File():930 Reading /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T184234/201906111842_201906112141.nc4 file... INFO 2019-06-18 00:12:54,732Z lrauvNc4ToNetcdf.py processResampleNc4File():931 After copying to /tmp/201906111842_201906112141.nc4 INFO 2019-06-18 00:12:56,074Z lrauvNc4ToNetcdf.py processResampleNc4File():933 Read file /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T184234/201906111842_201906112141.nc4 INFO 2019-06-18 00:13:04,184Z lrauvNc4ToNetcdf.py processResampleNc4File():938 Creating t variable of the time indexes WARNING 2019-06-18 00:13:04,196Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T184234/201906111842_201906112141.nc4 WARNING 2019-06-18 00:13:04,197Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T184234/201906111842_201906112141.nc4 WARNING 2019-06-18 00:13:04,197Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T184234/201906111842_201906112141.nc4 WARNING 2019-06-18 00:13:04,197Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T184234/201906111842_201906112141.nc4 WARNING 2019-06-18 00:13:04,197Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T184234/201906111842_201906112141.nc4 WARNING 2019-06-18 00:13:04,197Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T184234/201906111842_201906112141.nc4 WARNING 2019-06-18 00:13:04,198Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'downwelling_photosynthetic_photon_flux_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T184234/201906111842_201906112141.nc4 WARNING 2019-06-18 00:13:04,198Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mass_concentration_of_chlorophyll_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T184234/201906111842_201906112141.nc4 WARNING 2019-06-18 00:13:04,198Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'Output470' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T184234/201906111842_201906112141.nc4 WARNING 2019-06-18 00:13:04,198Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'Output650' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T184234/201906111842_201906112141.nc4 INFO 2019-06-18 00:13:04,225Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter concentration_of_chromophoric_dissolved_organic_matter_in_sea_water renaming to chromophoric_dissolved_organic_matter INFO 2019-06-18 00:13:04,244Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2019-06-18 00:13:04,245Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable BackscatteringCoeff700nm empty so skipping INFO 2019-06-18 00:13:04,264Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter VolumeScatCoeff117deg700nm renaming to VolumeScatCoeff117deg700nm INFO 2019-06-18 00:13:04,284Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_petroleum_hydrocarbons_in_sea_water renaming to petroleum_hydrocarbons INFO 2019-06-18 00:13:04,286Z lrauvNc4ToNetcdf.py nudge_coords():575 /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T184234/201906111842_201906112141.nc4 INFO 2019-06-18 00:13:05,021Z lrauvNc4ToNetcdf.py nudge_coords():593 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) INFO 2019-06-18 00:13:05,022Z lrauvNc4ToNetcdf.py nudge_coords():609 - - - 0 0.00 - - INFO 2019-06-18 00:13:05,027Z lrauvNc4ToNetcdf.py nudge_coords():631 0: 0.371 -0.0007537 0.0008222 701 4.72 -31.95 32.29 INFO 2019-06-18 00:13:05,033Z lrauvNc4ToNetcdf.py nudge_coords():631 1: 0.365 -0.0001403 0.0001592 137 0.92 -31.87 32.20 INFO 2019-06-18 00:13:05,039Z lrauvNc4ToNetcdf.py nudge_coords():631 2: 0.403 -0.0021013 0.0016442 1871 12.60 -23.93 24.19 INFO 2019-06-18 00:13:05,046Z lrauvNc4ToNetcdf.py nudge_coords():631 3: 0.368 -0.0010505 0.0012430 954 6.42 -35.52 35.90 INFO 2019-06-18 00:13:05,052Z lrauvNc4ToNetcdf.py nudge_coords():631 4: 0.352 -0.0009400 0.0010657 824 5.54 -35.25 35.62 INFO 2019-06-18 00:13:05,058Z lrauvNc4ToNetcdf.py nudge_coords():631 5: 0.367 -0.0009125 0.0009820 807 5.43 -33.17 33.51 INFO 2019-06-18 00:13:05,065Z lrauvNc4ToNetcdf.py nudge_coords():631 6: 0.362 -0.0006163 0.0007142 560 3.77 -34.76 35.12 INFO 2019-06-18 00:13:05,071Z lrauvNc4ToNetcdf.py nudge_coords():631 7: 0.373 -0.0000835 0.0001167 97 0.65 -33.11 33.45 INFO 2019-06-18 00:13:05,077Z lrauvNc4ToNetcdf.py nudge_coords():631 8: 0.367 -0.0014539 0.0003607 4268 28.80 -2.29 2.32 INFO 2019-06-18 00:13:05,084Z lrauvNc4ToNetcdf.py nudge_coords():631 9: 0.364 -0.0006912 0.0005770 521 3.50 -30.17 30.51 INFO 2019-06-18 00:13:05,090Z lrauvNc4ToNetcdf.py nudge_coords():631 10: 0.354 -0.0013105 0.0000483 4341 29.27 -0.30 0.31 INFO 2019-06-18 00:13:05,097Z lrauvNc4ToNetcdf.py nudge_coords():631 11: 0.341 -0.0004678 0.0005632 505 3.40 -30.36 30.71 INFO 2019-06-18 00:13:05,103Z lrauvNc4ToNetcdf.py nudge_coords():631 12: 0.358 0.0004525 -0.0002132 5082 34.22 1.14 -1.15 INFO 2019-06-18 00:13:05,110Z lrauvNc4ToNetcdf.py nudge_coords():631 13: 0.346 -0.0000473 0.0001040 84 0.57 -33.55 33.94 INFO 2019-06-18 00:13:05,116Z lrauvNc4ToNetcdf.py nudge_coords():631 14: 0.361 -0.0006285 -0.0007239 4645 31.30 4.24 -4.29 INFO 2019-06-18 00:13:05,123Z lrauvNc4ToNetcdf.py nudge_coords():661 16: - - - 523 3.52 - - INFO 2019-06-18 00:13:05,123Z lrauvNc4ToNetcdf.py nudge_coords():665 Points in final series = 25920 INFO 2019-06-18 00:13:05,141Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():499 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20190611T174245/20190611T224137/data.csv INFO 2019-06-18 00:13:05,169Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():522 Found 0 position values from the Tracking database INFO 2019-06-18 00:13:05,174Z lrauvNc4ToNetcdf.py processResampleNc4File():1066 ['chromophoric_dissolved_organic_matter', 'chlorophyll', 'VolumeScatCoeff117deg700nm', 'petroleum_hydrocarbons', 'latitude', 'longitude', 'depth', 'time'] INFO 2019-06-18 00:13:05,296Z lrauvNc4ToNetcdf.py processResampleNc4File():1069 Wrote /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T184234/201906111842_201906112141_10S_sci.nc