INFO 2019-06-19 17:14:57,312Z lrauvNc4ToNetcdf.py processResampleNc4File():937 Reading /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T184234/201906111842_201906112141.nc4 file... INFO 2019-06-19 17:14:57,312Z lrauvNc4ToNetcdf.py processResampleNc4File():938 After copying to /tmp/201906111842_201906112141.nc4 INFO 2019-06-19 17:14:58,183Z lrauvNc4ToNetcdf.py processResampleNc4File():940 Read file /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T184234/201906111842_201906112141.nc4 INFO 2019-06-19 17:15:06,420Z lrauvNc4ToNetcdf.py processResampleNc4File():945 Creating t variable of the time indexes WARNING 2019-06-19 17:15:13,979Z lrauvNc4ToNetcdf.py processResampleNc4File():956 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T184234/201906111842_201906112141.nc4 INFO 2019-06-19 17:15:14,038Z lrauvNc4ToNetcdf.py processResampleNc4File():956 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position WARNING 2019-06-19 17:15:14,039Z lrauvNc4ToNetcdf.py processResampleNc4File():956 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T184234/201906111842_201906112141.nc4 WARNING 2019-06-19 17:15:14,039Z lrauvNc4ToNetcdf.py processResampleNc4File():956 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T184234/201906111842_201906112141.nc4 WARNING 2019-06-19 17:15:14,039Z lrauvNc4ToNetcdf.py processResampleNc4File():956 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T184234/201906111842_201906112141.nc4 WARNING 2019-06-19 17:15:14,039Z lrauvNc4ToNetcdf.py processResampleNc4File():956 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T184234/201906111842_201906112141.nc4 INFO 2019-06-19 17:15:14,082Z lrauvNc4ToNetcdf.py processResampleNc4File():956 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle WARNING 2019-06-19 17:15:14,083Z lrauvNc4ToNetcdf.py processResampleNc4File():956 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T184234/201906111842_201906112141.nc4 INFO 2019-06-19 17:15:14,109Z lrauvNc4ToNetcdf.py processResampleNc4File():956 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2019-06-19 17:15:14,114Z lrauvNc4ToNetcdf.py processResampleNc4File():956 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2019-06-19 17:15:14,119Z lrauvNc4ToNetcdf.py processResampleNc4File():956 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2019-06-19 17:15:14,124Z lrauvNc4ToNetcdf.py processResampleNc4File():956 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude WARNING 2019-06-19 17:15:14,124Z lrauvNc4ToNetcdf.py processResampleNc4File():956 'downwelling_photosynthetic_photon_flux_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T184234/201906111842_201906112141.nc4 INFO 2019-06-19 17:15:14,213Z lrauvNc4ToNetcdf.py processResampleNc4File():956 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2019-06-19 17:15:14,583Z lrauvNc4ToNetcdf.py processResampleNc4File():956 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate WARNING 2019-06-19 17:15:14,584Z lrauvNc4ToNetcdf.py processResampleNc4File():956 'mass_concentration_of_chlorophyll_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T184234/201906111842_201906112141.nc4 WARNING 2019-06-19 17:15:14,584Z lrauvNc4ToNetcdf.py processResampleNc4File():956 'Output470' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T184234/201906111842_201906112141.nc4 WARNING 2019-06-19 17:15:14,584Z lrauvNc4ToNetcdf.py processResampleNc4File():956 'Output650' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T184234/201906111842_201906112141.nc4 INFO 2019-06-19 17:15:14,604Z lrauvNc4ToNetcdf.py processResampleNc4File():956 Found in group WetLabsSeaOWL_UV_A parameter concentration_of_chromophoric_dissolved_organic_matter_in_sea_water renaming to chromophoric_dissolved_organic_matter INFO 2019-06-19 17:15:14,623Z lrauvNc4ToNetcdf.py processResampleNc4File():956 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2019-06-19 17:15:14,625Z lrauvNc4ToNetcdf.py processResampleNc4File():956 Variable BackscatteringCoeff700nm empty so skipping INFO 2019-06-19 17:15:14,644Z lrauvNc4ToNetcdf.py processResampleNc4File():956 Found in group WetLabsSeaOWL_UV_A parameter VolumeScatCoeff117deg700nm renaming to VolumeScatCoeff117deg700nm INFO 2019-06-19 17:15:14,663Z lrauvNc4ToNetcdf.py processResampleNc4File():956 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_petroleum_hydrocarbons_in_sea_water renaming to petroleum_hydrocarbons INFO 2019-06-19 17:15:14,668Z lrauvNc4ToNetcdf.py processResampleNc4File():956 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2019-06-19 17:15:15,173Z lrauvNc4ToNetcdf.py processResampleNc4File():956 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2019-06-19 17:15:15,681Z lrauvNc4ToNetcdf.py processResampleNc4File():956 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2019-06-19 17:15:16,187Z lrauvNc4ToNetcdf.py processResampleNc4File():956 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources WARNING 2019-06-19 17:15:16,187Z lrauvNc4ToNetcdf.py processResampleNc4File():956 'fix_residual_percent_distance_traveled' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T184234/201906111842_201906112141.nc4 WARNING 2019-06-19 17:15:16,187Z lrauvNc4ToNetcdf.py processResampleNc4File():956 'longitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T184234/201906111842_201906112141.nc4 WARNING 2019-06-19 17:15:16,187Z lrauvNc4ToNetcdf.py processResampleNc4File():956 'latitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T184234/201906111842_201906112141.nc4 WARNING 2019-06-19 17:15:16,187Z lrauvNc4ToNetcdf.py processResampleNc4File():956 'depth' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T184234/201906111842_201906112141.nc4 INFO 2019-06-19 17:15:16,195Z lrauvNc4ToNetcdf.py processResampleNc4File():956 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2019-06-19 17:15:16,201Z lrauvNc4ToNetcdf.py processResampleNc4File():956 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage WARNING 2019-06-19 17:15:16,202Z lrauvNc4ToNetcdf.py processResampleNc4File():956 'platform_average_current' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T184234/201906111842_201906112141.nc4 INFO 2019-06-19 17:15:16,725Z lrauvNc4ToNetcdf.py createNav():465 platform_pitch_angle -> pitch: {'units': 'rad', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-06-19 17:15:17,243Z lrauvNc4ToNetcdf.py createNav():465 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-06-19 17:15:17,777Z lrauvNc4ToNetcdf.py createNav():465 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-06-19 17:15:17,778Z lrauvNc4ToNetcdf.py nudge_coords():582 /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T184234/201906111842_201906112141.nc4 INFO 2019-06-19 17:15:18,491Z lrauvNc4ToNetcdf.py nudge_coords():600 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) INFO 2019-06-19 17:15:18,493Z lrauvNc4ToNetcdf.py nudge_coords():616 - - - 0 0.00 - - INFO 2019-06-19 17:15:18,498Z lrauvNc4ToNetcdf.py nudge_coords():638 0: 0.371 -0.0007537 0.0008222 701 4.72 -31.95 32.29 INFO 2019-06-19 17:15:18,504Z lrauvNc4ToNetcdf.py nudge_coords():638 1: 0.365 -0.0001403 0.0001592 137 0.92 -31.87 32.20 INFO 2019-06-19 17:15:18,510Z lrauvNc4ToNetcdf.py nudge_coords():638 2: 0.403 -0.0021013 0.0016442 1871 12.60 -23.93 24.19 INFO 2019-06-19 17:15:18,516Z lrauvNc4ToNetcdf.py nudge_coords():638 3: 0.368 -0.0010505 0.0012430 954 6.42 -35.52 35.90 INFO 2019-06-19 17:15:18,522Z lrauvNc4ToNetcdf.py nudge_coords():638 4: 0.352 -0.0009400 0.0010657 824 5.54 -35.25 35.62 INFO 2019-06-19 17:15:18,528Z lrauvNc4ToNetcdf.py nudge_coords():638 5: 0.367 -0.0009125 0.0009820 807 5.43 -33.17 33.51 INFO 2019-06-19 17:15:18,534Z lrauvNc4ToNetcdf.py nudge_coords():638 6: 0.362 -0.0006163 0.0007142 560 3.77 -34.76 35.12 INFO 2019-06-19 17:15:18,540Z lrauvNc4ToNetcdf.py nudge_coords():638 7: 0.373 -0.0000835 0.0001167 97 0.65 -33.11 33.45 INFO 2019-06-19 17:15:18,546Z lrauvNc4ToNetcdf.py nudge_coords():638 8: 0.367 -0.0014539 0.0003607 4268 28.80 -2.29 2.32 INFO 2019-06-19 17:15:18,552Z lrauvNc4ToNetcdf.py nudge_coords():638 9: 0.364 -0.0006912 0.0005770 521 3.50 -30.17 30.51 INFO 2019-06-19 17:15:18,558Z lrauvNc4ToNetcdf.py nudge_coords():638 10: 0.354 -0.0013105 0.0000483 4341 29.27 -0.30 0.31 INFO 2019-06-19 17:15:18,564Z lrauvNc4ToNetcdf.py nudge_coords():638 11: 0.341 -0.0004678 0.0005632 505 3.40 -30.36 30.71 INFO 2019-06-19 17:15:18,570Z lrauvNc4ToNetcdf.py nudge_coords():638 12: 0.358 0.0004525 -0.0002132 5082 34.22 1.14 -1.15 INFO 2019-06-19 17:15:18,576Z lrauvNc4ToNetcdf.py nudge_coords():638 13: 0.346 -0.0000473 0.0001040 84 0.57 -33.55 33.94 INFO 2019-06-19 17:15:18,582Z lrauvNc4ToNetcdf.py nudge_coords():638 14: 0.361 -0.0006285 -0.0007239 4645 31.30 4.24 -4.29 INFO 2019-06-19 17:15:18,589Z lrauvNc4ToNetcdf.py nudge_coords():668 16: - - - 523 3.52 - - INFO 2019-06-19 17:15:18,589Z lrauvNc4ToNetcdf.py nudge_coords():672 Points in final series = 25920 INFO 2019-06-19 17:15:18,604Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():506 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20190611T174245/20190611T224137/data.csv INFO 2019-06-19 17:15:18,624Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():529 Found 0 position values from the Tracking database INFO 2019-06-19 17:15:18,628Z lrauvNc4ToNetcdf.py processResampleNc4File():956 ['control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'chromophoric_dissolved_organic_matter', 'chlorophyll', 'VolumeScatCoeff117deg700nm', 'petroleum_hydrocarbons', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_battery_charge', 'health_platform_average_voltage', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2019-06-19 17:15:19,164Z lrauvNc4ToNetcdf.py processResampleNc4File():956 Wrote /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190611T184234/201906111842_201906112141_2S_scieng.nc