INFO 2019-06-18 00:14:13,681Z lrauvNc4ToNetcdf.py processResampleNc4File():930 Reading /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190612T165427/201906121654_201906121658.nc4 file...
INFO 2019-06-18 00:14:13,682Z lrauvNc4ToNetcdf.py processResampleNc4File():931 After copying to /tmp/201906121654_201906121658.nc4
INFO 2019-06-18 00:14:14,892Z lrauvNc4ToNetcdf.py processResampleNc4File():933 Read file /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190612T165427/201906121654_201906121658.nc4
INFO 2019-06-18 00:14:15,247Z lrauvNc4ToNetcdf.py processResampleNc4File():938 Creating t variable of the time indexes
WARNING 2019-06-18 00:14:15,250Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190612T165427/201906121654_201906121658.nc4
INFO 2019-06-18 00:14:15,252Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable sea_water_salinity empty so skipping
INFO 2019-06-18 00:14:15,253Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable sea_water_temperature empty so skipping
WARNING 2019-06-18 00:14:15,254Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190612T165427/201906121654_201906121658.nc4
WARNING 2019-06-18 00:14:15,254Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190612T165427/201906121654_201906121658.nc4
WARNING 2019-06-18 00:14:15,254Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190612T165427/201906121654_201906121658.nc4
WARNING 2019-06-18 00:14:15,254Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'downwelling_photosynthetic_photon_flux_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190612T165427/201906121654_201906121658.nc4
WARNING 2019-06-18 00:14:15,254Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'mass_concentration_of_chlorophyll_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190612T165427/201906121654_201906121658.nc4
WARNING 2019-06-18 00:14:15,254Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'Output470' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190612T165427/201906121654_201906121658.nc4
WARNING 2019-06-18 00:14:15,255Z lrauvNc4ToNetcdf.py processResampleNc4File():1015 'Output650' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190612T165427/201906121654_201906121658.nc4
INFO 2019-06-18 00:14:15,259Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter concentration_of_chromophoric_dissolved_organic_matter_in_sea_water renaming to chromophoric_dissolved_organic_matter
INFO 2019-06-18 00:14:15,263Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll
INFO 2019-06-18 00:14:15,264Z lrauvNc4ToNetcdf.py processResampleNc4File():976 Variable BackscatteringCoeff700nm empty so skipping
INFO 2019-06-18 00:14:15,268Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter VolumeScatCoeff117deg700nm renaming to VolumeScatCoeff117deg700nm
INFO 2019-06-18 00:14:15,272Z lrauvNc4ToNetcdf.py processResampleNc4File():1013 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_petroleum_hydrocarbons_in_sea_water renaming to petroleum_hydrocarbons
INFO 2019-06-18 00:14:15,273Z lrauvNc4ToNetcdf.py nudge_coords():575 /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190612T165427/201906121654_201906121658.nc4
INFO 2019-06-18 00:14:15,404Z lrauvNc4ToNetcdf.py nudge_coords():593 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s)
INFO 2019-06-18 00:14:15,405Z lrauvNc4ToNetcdf.py nudge_coords():609                  -            -            -         0    0.00              -              -
INFO 2019-06-18 00:14:15,407Z lrauvNc4ToNetcdf.py nudge_coords():631    0:        0.358   -0.0000435    0.0000245        28    0.18         -24.65          24.98
INFO 2019-06-18 00:14:15,413Z lrauvNc4ToNetcdf.py nudge_coords():631    1:        0.267   -0.0004163    0.0002625       333    2.35         -20.44          20.71
INFO 2019-06-18 00:14:15,419Z lrauvNc4ToNetcdf.py nudge_coords():661    3:            -            -            -        29    0.22              -              -
INFO 2019-06-18 00:14:15,419Z lrauvNc4ToNetcdf.py nudge_coords():665 Points in final series = 390
INFO 2019-06-18 00:14:15,433Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():499 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20190612T155440/20190612T175839/data.csv
INFO 2019-06-18 00:14:15,459Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():522 Found 0 position values from the Tracking database
INFO 2019-06-18 00:14:15,463Z lrauvNc4ToNetcdf.py processResampleNc4File():1066 ['chromophoric_dissolved_organic_matter', 'chlorophyll', 'VolumeScatCoeff117deg700nm', 'petroleum_hydrocarbons', 'latitude', 'longitude', 'depth', 'time']
INFO 2019-06-18 00:14:15,670Z lrauvNc4ToNetcdf.py processResampleNc4File():1069 Wrote /mbari/LRAUV/whoidhs/missionlogs/2019/20190610_20190613/20190612T165427/201906121654_201906121658_10S_sci.nc