INFO 2019-07-04 18:04:31,426Z lrauvNc4ToNetcdf.py processResampleNc4File():937 Reading /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T045324/201907020453_201907020637.nc4 file... INFO 2019-07-04 18:04:31,427Z lrauvNc4ToNetcdf.py processResampleNc4File():938 After copying to /tmp/201907020453_201907020637.nc4 INFO 2019-07-04 18:04:32,886Z lrauvNc4ToNetcdf.py processResampleNc4File():940 Read file /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T045324/201907020453_201907020637.nc4 INFO 2019-07-04 18:04:37,764Z lrauvNc4ToNetcdf.py processResampleNc4File():945 Creating t variable of the time indexes WARNING 2019-07-04 18:04:37,773Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T045324/201907020453_201907020637.nc4 INFO 2019-07-04 18:04:37,798Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2019-07-04 18:04:37,800Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable sea_water_salinity empty so skipping INFO 2019-07-04 18:04:37,802Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable sea_water_temperature empty so skipping WARNING 2019-07-04 18:04:37,802Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T045324/201907020453_201907020637.nc4 WARNING 2019-07-04 18:04:37,802Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T045324/201907020453_201907020637.nc4 INFO 2019-07-04 18:04:37,827Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle WARNING 2019-07-04 18:04:37,828Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T045324/201907020453_201907020637.nc4 INFO 2019-07-04 18:04:37,841Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2019-07-04 18:04:37,846Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2019-07-04 18:04:37,851Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2019-07-04 18:04:37,856Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude WARNING 2019-07-04 18:04:37,856Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'downwelling_photosynthetic_photon_flux_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T045324/201907020453_201907020637.nc4 INFO 2019-07-04 18:04:37,936Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2019-07-04 18:04:38,151Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate WARNING 2019-07-04 18:04:38,152Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'mass_concentration_of_chlorophyll_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T045324/201907020453_201907020637.nc4 WARNING 2019-07-04 18:04:38,152Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'Output470' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T045324/201907020453_201907020637.nc4 WARNING 2019-07-04 18:04:38,152Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'Output650' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T045324/201907020453_201907020637.nc4 INFO 2019-07-04 18:04:38,154Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable concentration_of_chromophoric_dissolved_organic_matter_in_sea_water empty so skipping INFO 2019-07-04 18:04:38,156Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2019-07-04 18:04:38,158Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable BackscatteringCoeff700nm empty so skipping INFO 2019-07-04 18:04:38,159Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable VolumeScatCoeff117deg700nm empty so skipping INFO 2019-07-04 18:04:38,161Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable mass_concentration_of_petroleum_hydrocarbons_in_sea_water empty so skipping INFO 2019-07-04 18:04:38,166Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2019-07-04 18:04:38,465Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2019-07-04 18:04:38,767Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2019-07-04 18:04:39,066Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources WARNING 2019-07-04 18:04:39,066Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'fix_residual_percent_distance_traveled' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T045324/201907020453_201907020637.nc4 WARNING 2019-07-04 18:04:39,066Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'longitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T045324/201907020453_201907020637.nc4 WARNING 2019-07-04 18:04:39,066Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'latitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T045324/201907020453_201907020637.nc4 WARNING 2019-07-04 18:04:39,067Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'depth' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T045324/201907020453_201907020637.nc4 INFO 2019-07-04 18:04:39,075Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2019-07-04 18:04:39,082Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage WARNING 2019-07-04 18:04:39,082Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'platform_average_current' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T045324/201907020453_201907020637.nc4 INFO 2019-07-04 18:04:39,397Z lrauvNc4ToNetcdf.py createNav():465 platform_pitch_angle -> pitch: {'units': 'rad', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-07-04 18:04:39,714Z lrauvNc4ToNetcdf.py createNav():465 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-07-04 18:04:40,027Z lrauvNc4ToNetcdf.py createNav():465 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-07-04 18:04:40,029Z lrauvNc4ToNetcdf.py nudge_coords():582 /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T045324/201907020453_201907020637.nc4 INFO 2019-07-04 18:04:40,514Z lrauvNc4ToNetcdf.py nudge_coords():600 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) INFO 2019-07-04 18:04:40,516Z lrauvNc4ToNetcdf.py nudge_coords():616 - - - 167 1.12 - - INFO 2019-07-04 18:04:40,519Z lrauvNc4ToNetcdf.py nudge_coords():638 0: 0.396 -0.0002137 0.0001437 159 1.09 15.48 24.40 INFO 2019-07-04 18:04:40,525Z lrauvNc4ToNetcdf.py nudge_coords():638 1: 0.347 -0.0002172 0.0001267 147 1.00 14.93 23.52 INFO 2019-07-04 18:04:40,531Z lrauvNc4ToNetcdf.py nudge_coords():638 2: 0.359 0.0036701 0.0000664 5924 39.93 0.19 0.31 INFO 2019-07-04 18:04:40,538Z lrauvNc4ToNetcdf.py nudge_coords():638 3: 0.385 0.0001322 0.0000361 467 3.15 1.34 2.12 INFO 2019-07-04 18:04:40,544Z lrauvNc4ToNetcdf.py nudge_coords():638 4: 0.360 -0.0000039 0.0000015 62 0.41 0.44 0.69 INFO 2019-07-04 18:04:40,550Z lrauvNc4ToNetcdf.py nudge_coords():638 5: 0.378 0.0003971 0.0002009 821 5.54 4.26 6.72 INFO 2019-07-04 18:04:40,556Z lrauvNc4ToNetcdf.py nudge_coords():638 6: 0.373 0.0004382 0.0002647 815 5.49 5.66 8.93 INFO 2019-07-04 18:04:40,562Z lrauvNc4ToNetcdf.py nudge_coords():638 7: 0.374 0.0000431 0.0000446 187 1.49 3.52 5.55 INFO 2019-07-04 18:04:40,568Z lrauvNc4ToNetcdf.py nudge_coords():638 8: 0.372 0.0000167 0.0000278 109 0.76 4.30 6.78 INFO 2019-07-04 18:04:40,574Z lrauvNc4ToNetcdf.py nudge_coords():638 9: 0.370 0.0041803 -0.0015517 5230 35.23 -5.15 -8.16 INFO 2019-07-04 18:04:40,580Z lrauvNc4ToNetcdf.py nudge_coords():638 10: 0.319 0.0001639 0.0000711 506 3.58 2.32 3.68 INFO 2019-07-04 18:04:40,586Z lrauvNc4ToNetcdf.py nudge_coords():638 11: 0.356 0.0001021 0.0000413 293 1.97 2.46 3.89 INFO 2019-07-04 18:04:40,592Z lrauvNc4ToNetcdf.py nudge_coords():668 13: - - - 475 3.26 - - INFO 2019-07-04 18:04:40,592Z lrauvNc4ToNetcdf.py nudge_coords():672 Points in final series = 15195 INFO 2019-07-04 18:04:40,610Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():506 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20190702T035324/20190702T073730/data.csv INFO 2019-07-04 18:04:40,664Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():529 Found 0 position values from the Tracking database INFO 2019-07-04 18:04:40,669Z lrauvNc4ToNetcdf.py processResampleNc4File():1073 ['control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_battery_charge', 'health_platform_average_voltage', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2019-07-04 18:04:41,011Z lrauvNc4ToNetcdf.py processResampleNc4File():1076 Wrote /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T045324/201907020453_201907020637_2S_scieng.nc