INFO 2019-07-04 18:05:30,138Z lrauvNc4ToNetcdf.py processResampleNc4File():937 Reading /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T151652/201907021516_201907021624.nc4 file...
INFO 2019-07-04 18:05:30,139Z lrauvNc4ToNetcdf.py processResampleNc4File():938 After copying to /tmp/201907021516_201907021624.nc4
INFO 2019-07-04 18:05:31,180Z lrauvNc4ToNetcdf.py processResampleNc4File():940 Read file /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T151652/201907021516_201907021624.nc4
INFO 2019-07-04 18:05:34,426Z lrauvNc4ToNetcdf.py processResampleNc4File():945 Creating t variable of the time indexes
WARNING 2019-07-04 18:05:34,433Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T151652/201907021516_201907021624.nc4
INFO 2019-07-04 18:05:34,448Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position
INFO 2019-07-04 18:05:34,450Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable sea_water_salinity empty so skipping
INFO 2019-07-04 18:05:34,451Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable sea_water_temperature empty so skipping
WARNING 2019-07-04 18:05:34,452Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T151652/201907021516_201907021624.nc4
WARNING 2019-07-04 18:05:34,452Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T151652/201907021516_201907021624.nc4
INFO 2019-07-04 18:05:34,465Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle
WARNING 2019-07-04 18:05:34,465Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T151652/201907021516_201907021624.nc4
INFO 2019-07-04 18:05:34,471Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position
INFO 2019-07-04 18:05:34,476Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group NAL9602 parameter time_fix renaming to fix_time
INFO 2019-07-04 18:05:34,480Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude
INFO 2019-07-04 18:05:34,485Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude
WARNING 2019-07-04 18:05:34,485Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'downwelling_photosynthetic_photon_flux_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T151652/201907021516_201907021624.nc4
INFO 2019-07-04 18:05:34,546Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle
INFO 2019-07-04 18:05:34,692Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate
WARNING 2019-07-04 18:05:34,692Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'mass_concentration_of_chlorophyll_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T151652/201907021516_201907021624.nc4
WARNING 2019-07-04 18:05:34,693Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'Output470' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T151652/201907021516_201907021624.nc4
WARNING 2019-07-04 18:05:34,693Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'Output650' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T151652/201907021516_201907021624.nc4
INFO 2019-07-04 18:05:34,695Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable concentration_of_chromophoric_dissolved_organic_matter_in_sea_water empty so skipping
INFO 2019-07-04 18:05:34,697Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping
INFO 2019-07-04 18:05:34,698Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable BackscatteringCoeff700nm empty so skipping
INFO 2019-07-04 18:05:34,700Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable VolumeScatCoeff117deg700nm empty so skipping
INFO 2019-07-04 18:05:34,702Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable mass_concentration_of_petroleum_hydrocarbons_in_sea_water empty so skipping
INFO 2019-07-04 18:05:34,706Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources
INFO 2019-07-04 18:05:34,902Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-07-04 18:05:35,099Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-07-04 18:05:35,297Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources
WARNING 2019-07-04 18:05:35,297Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'fix_residual_percent_distance_traveled' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T151652/201907021516_201907021624.nc4
WARNING 2019-07-04 18:05:35,297Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'longitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T151652/201907021516_201907021624.nc4
WARNING 2019-07-04 18:05:35,298Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'latitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T151652/201907021516_201907021624.nc4
WARNING 2019-07-04 18:05:35,298Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'depth' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T151652/201907021516_201907021624.nc4
INFO 2019-07-04 18:05:35,306Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge
INFO 2019-07-04 18:05:35,313Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage
WARNING 2019-07-04 18:05:35,313Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'platform_average_current' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T151652/201907021516_201907021624.nc4
INFO 2019-07-04 18:05:35,524Z lrauvNc4ToNetcdf.py createNav():465 platform_pitch_angle -> pitch: {'units': 'rad', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-07-04 18:05:35,735Z lrauvNc4ToNetcdf.py createNav():465 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-07-04 18:05:35,945Z lrauvNc4ToNetcdf.py createNav():465 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-07-04 18:05:35,946Z lrauvNc4ToNetcdf.py nudge_coords():582 /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T151652/201907021516_201907021624.nc4
INFO 2019-07-04 18:05:36,300Z lrauvNc4ToNetcdf.py nudge_coords():600 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s)
INFO 2019-07-04 18:05:36,302Z lrauvNc4ToNetcdf.py nudge_coords():616                  -            -            -       251    1.68              -              -
INFO 2019-07-04 18:05:36,305Z lrauvNc4ToNetcdf.py nudge_coords():638    0:        0.370   -0.0000232    0.0000080       167    1.13           0.83           1.32
INFO 2019-07-04 18:05:36,311Z lrauvNc4ToNetcdf.py nudge_coords():638    1:        0.281    0.0055013   -0.0024220      7759   52.26          -5.41          -8.59
INFO 2019-07-04 18:05:36,318Z lrauvNc4ToNetcdf.py nudge_coords():638    2:        0.392    0.0000000    0.0000027         9    0.06           4.87           7.73
INFO 2019-07-04 18:05:36,324Z lrauvNc4ToNetcdf.py nudge_coords():638    3:        0.288   -0.0000114    0.0000077        43    0.28           3.16           5.01
INFO 2019-07-04 18:05:36,330Z lrauvNc4ToNetcdf.py nudge_coords():638    4:        0.363    0.0000727    0.0000412       867    5.84           0.83           1.31
INFO 2019-07-04 18:05:36,336Z lrauvNc4ToNetcdf.py nudge_coords():638    5:        0.358    0.0001026    0.0000117       808    5.44           0.25           0.40
INFO 2019-07-04 18:05:36,341Z lrauvNc4ToNetcdf.py nudge_coords():668    7:            -            -            -        89    0.60              -              -
INFO 2019-07-04 18:05:36,342Z lrauvNc4ToNetcdf.py nudge_coords():672 Points in final series = 9993
INFO 2019-07-04 18:05:36,358Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():506 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20190702T141652/20190702T172413/data.csv
INFO 2019-07-04 18:05:36,384Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():529 Found 0 position values from the Tracking database
INFO 2019-07-04 18:05:36,389Z lrauvNc4ToNetcdf.py processResampleNc4File():1073 ['control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_battery_charge', 'health_platform_average_voltage', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time']
INFO 2019-07-04 18:05:36,846Z lrauvNc4ToNetcdf.py processResampleNc4File():1076 Wrote /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T151652/201907021516_201907021624_2S_scieng.nc