INFO 2019-07-04 18:05:37,285Z lrauvNc4ToNetcdf.py processResampleNc4File():937 Reading /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T162413/201907021624_201907021908.nc4 file... INFO 2019-07-04 18:05:37,286Z lrauvNc4ToNetcdf.py processResampleNc4File():938 After copying to /tmp/201907021624_201907021908.nc4 INFO 2019-07-04 18:05:38,325Z lrauvNc4ToNetcdf.py processResampleNc4File():940 Read file /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T162413/201907021624_201907021908.nc4 INFO 2019-07-04 18:05:45,729Z lrauvNc4ToNetcdf.py processResampleNc4File():945 Creating t variable of the time indexes WARNING 2019-07-04 18:05:45,738Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T162413/201907021624_201907021908.nc4 INFO 2019-07-04 18:05:45,776Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2019-07-04 18:05:46,094Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group CTD_NeilBrown parameter sea_water_salinity renaming to salinity INFO 2019-07-04 18:05:46,408Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group CTD_NeilBrown parameter sea_water_temperature renaming to temperature WARNING 2019-07-04 18:05:46,409Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T162413/201907021624_201907021908.nc4 WARNING 2019-07-04 18:05:46,409Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T162413/201907021624_201907021908.nc4 INFO 2019-07-04 18:05:46,458Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle WARNING 2019-07-04 18:05:46,458Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T162413/201907021624_201907021908.nc4 INFO 2019-07-04 18:05:46,467Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2019-07-04 18:05:46,472Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2019-07-04 18:05:46,477Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2019-07-04 18:05:46,481Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude WARNING 2019-07-04 18:05:46,482Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'downwelling_photosynthetic_photon_flux_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T162413/201907021624_201907021908.nc4 INFO 2019-07-04 18:05:46,666Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2019-07-04 18:05:47,050Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate WARNING 2019-07-04 18:05:47,050Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'mass_concentration_of_chlorophyll_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T162413/201907021624_201907021908.nc4 WARNING 2019-07-04 18:05:47,051Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'Output470' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T162413/201907021624_201907021908.nc4 WARNING 2019-07-04 18:05:47,051Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'Output650' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T162413/201907021624_201907021908.nc4 INFO 2019-07-04 18:05:47,119Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group WetLabsSeaOWL_UV_A parameter concentration_of_chromophoric_dissolved_organic_matter_in_sea_water renaming to chromophoric_dissolved_organic_matter INFO 2019-07-04 18:05:47,188Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2019-07-04 18:05:47,190Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable BackscatteringCoeff700nm empty so skipping INFO 2019-07-04 18:05:47,257Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group WetLabsSeaOWL_UV_A parameter VolumeScatCoeff117deg700nm renaming to VolumeScatCoeff117deg700nm INFO 2019-07-04 18:05:47,324Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_petroleum_hydrocarbons_in_sea_water renaming to petroleum_hydrocarbons INFO 2019-07-04 18:05:47,329Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2019-07-04 18:05:47,801Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2019-07-04 18:05:48,270Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2019-07-04 18:05:48,745Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources WARNING 2019-07-04 18:05:48,745Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'fix_residual_percent_distance_traveled' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T162413/201907021624_201907021908.nc4 WARNING 2019-07-04 18:05:48,746Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'longitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T162413/201907021624_201907021908.nc4 WARNING 2019-07-04 18:05:48,746Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'latitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T162413/201907021624_201907021908.nc4 WARNING 2019-07-04 18:05:48,746Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'depth' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T162413/201907021624_201907021908.nc4 INFO 2019-07-04 18:05:48,754Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2019-07-04 18:05:48,761Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage WARNING 2019-07-04 18:05:48,761Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'platform_average_current' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T162413/201907021624_201907021908.nc4 INFO 2019-07-04 18:05:49,227Z lrauvNc4ToNetcdf.py createNav():465 platform_pitch_angle -> pitch: {'units': 'rad', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-07-04 18:05:49,696Z lrauvNc4ToNetcdf.py createNav():465 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-07-04 18:05:50,161Z lrauvNc4ToNetcdf.py createNav():465 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-07-04 18:05:50,163Z lrauvNc4ToNetcdf.py nudge_coords():582 /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T162413/201907021624_201907021908.nc4 INFO 2019-07-04 18:05:50,829Z lrauvNc4ToNetcdf.py nudge_coords():600 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) INFO 2019-07-04 18:05:50,832Z lrauvNc4ToNetcdf.py nudge_coords():616 - - - 721 4.85 - - INFO 2019-07-04 18:05:50,835Z lrauvNc4ToNetcdf.py nudge_coords():638 0: 0.361 0.0000781 -0.0000001 421 2.84 -0.00 -0.01 INFO 2019-07-04 18:05:50,842Z lrauvNc4ToNetcdf.py nudge_coords():638 1: 0.358 0.0000656 0.0000101 160 1.09 1.08 1.72 INFO 2019-07-04 18:05:50,848Z lrauvNc4ToNetcdf.py nudge_coords():638 2: 0.365 0.0008380 -0.0010917 2474 16.67 -7.63 -12.14 INFO 2019-07-04 18:05:50,854Z lrauvNc4ToNetcdf.py nudge_coords():638 3: 0.360 0.0000002 -0.0000004 9 0.06 -0.76 -1.21 INFO 2019-07-04 18:05:50,860Z lrauvNc4ToNetcdf.py nudge_coords():638 4: 0.355 0.0009982 -0.0006710 2394 16.12 -4.88 -7.71 INFO 2019-07-04 18:05:50,866Z lrauvNc4ToNetcdf.py nudge_coords():638 5: 0.354 -0.0000490 0.0002285 503 3.55 7.54 11.92 INFO 2019-07-04 18:05:50,872Z lrauvNc4ToNetcdf.py nudge_coords():638 6: 0.336 0.0005116 -0.0006640 2528 17.02 -4.56 -7.23 INFO 2019-07-04 18:05:50,879Z lrauvNc4ToNetcdf.py nudge_coords():638 7: 0.365 -0.0000099 -0.0000281 336 2.35 -1.40 -2.22 INFO 2019-07-04 18:05:50,885Z lrauvNc4ToNetcdf.py nudge_coords():638 8: 0.368 -0.0000058 -0.0000103 100 0.67 -1.81 -2.86 INFO 2019-07-04 18:05:50,891Z lrauvNc4ToNetcdf.py nudge_coords():638 9: 0.366 0.0000024 -0.0000114 69 0.49 -2.74 -4.34 INFO 2019-07-04 18:05:50,897Z lrauvNc4ToNetcdf.py nudge_coords():638 10: 0.332 -0.0000114 -0.0000033 90 0.60 -0.64 -1.01 INFO 2019-07-04 18:05:50,903Z lrauvNc4ToNetcdf.py nudge_coords():638 11: 0.379 0.0041969 -0.0022957 7100 47.81 -5.60 -8.90 INFO 2019-07-04 18:05:50,909Z lrauvNc4ToNetcdf.py nudge_coords():638 12: 0.344 0.0000483 -0.0000013 497 3.38 -0.05 -0.07 INFO 2019-07-04 18:05:50,916Z lrauvNc4ToNetcdf.py nudge_coords():638 13: 0.364 0.0028152 -0.0017924 6501 43.78 -4.78 -7.59 INFO 2019-07-04 18:05:50,923Z lrauvNc4ToNetcdf.py nudge_coords():638 14: 0.358 0.0000049 0.0000024 69 0.47 0.60 0.95 INFO 2019-07-04 18:05:50,929Z lrauvNc4ToNetcdf.py nudge_coords():638 15: 0.313 -0.0000288 -0.0000210 43 0.28 -8.60 -13.66 INFO 2019-07-04 18:05:50,935Z lrauvNc4ToNetcdf.py nudge_coords():668 17: - - - 362 2.46 - - INFO 2019-07-04 18:05:50,935Z lrauvNc4ToNetcdf.py nudge_coords():672 Points in final series = 24377 INFO 2019-07-04 18:05:50,951Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():506 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20190702T152413/20190702T200851/data.csv INFO 2019-07-04 18:05:50,981Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():529 Found 0 position values from the Tracking database INFO 2019-07-04 18:05:50,986Z lrauvNc4ToNetcdf.py processResampleNc4File():1073 ['control_inputs_buoyancy_position', 'salinity', 'temperature', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'chromophoric_dissolved_organic_matter', 'chlorophyll', 'VolumeScatCoeff117deg700nm', 'petroleum_hydrocarbons', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_battery_charge', 'health_platform_average_voltage', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2019-07-04 18:05:51,588Z lrauvNc4ToNetcdf.py processResampleNc4File():1076 Wrote /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T162413/201907021624_201907021908_2S_scieng.nc