INFO 2019-07-04 18:06:03,629Z lrauvNc4ToNetcdf.py processResampleNc4File():937 Reading /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T202848/201907022028_201907022122.nc4 file...
INFO 2019-07-04 18:06:03,630Z lrauvNc4ToNetcdf.py processResampleNc4File():938 After copying to /tmp/201907022028_201907022122.nc4
INFO 2019-07-04 18:06:04,932Z lrauvNc4ToNetcdf.py processResampleNc4File():940 Read file /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T202848/201907022028_201907022122.nc4
INFO 2019-07-04 18:06:07,674Z lrauvNc4ToNetcdf.py processResampleNc4File():945 Creating t variable of the time indexes
WARNING 2019-07-04 18:06:07,680Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T202848/201907022028_201907022122.nc4
INFO 2019-07-04 18:06:07,699Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position
INFO 2019-07-04 18:06:07,701Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable sea_water_salinity empty so skipping
INFO 2019-07-04 18:06:07,702Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable sea_water_temperature empty so skipping
WARNING 2019-07-04 18:06:07,703Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T202848/201907022028_201907022122.nc4
WARNING 2019-07-04 18:06:07,703Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T202848/201907022028_201907022122.nc4
INFO 2019-07-04 18:06:07,715Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle
WARNING 2019-07-04 18:06:07,715Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T202848/201907022028_201907022122.nc4
INFO 2019-07-04 18:06:07,721Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position
INFO 2019-07-04 18:06:07,725Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group NAL9602 parameter time_fix renaming to fix_time
INFO 2019-07-04 18:06:07,730Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude
INFO 2019-07-04 18:06:07,735Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude
WARNING 2019-07-04 18:06:07,735Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'downwelling_photosynthetic_photon_flux_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T202848/201907022028_201907022122.nc4
INFO 2019-07-04 18:06:07,766Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle
INFO 2019-07-04 18:06:07,840Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate
WARNING 2019-07-04 18:06:07,840Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'mass_concentration_of_chlorophyll_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T202848/201907022028_201907022122.nc4
WARNING 2019-07-04 18:06:07,841Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'Output470' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T202848/201907022028_201907022122.nc4
WARNING 2019-07-04 18:06:07,841Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'Output650' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T202848/201907022028_201907022122.nc4
INFO 2019-07-04 18:06:07,843Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable concentration_of_chromophoric_dissolved_organic_matter_in_sea_water empty so skipping
INFO 2019-07-04 18:06:07,845Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping
INFO 2019-07-04 18:06:07,846Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable BackscatteringCoeff700nm empty so skipping
INFO 2019-07-04 18:06:07,848Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable VolumeScatCoeff117deg700nm empty so skipping
INFO 2019-07-04 18:06:07,850Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable mass_concentration_of_petroleum_hydrocarbons_in_sea_water empty so skipping
INFO 2019-07-04 18:06:07,854Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources
INFO 2019-07-04 18:06:08,041Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-07-04 18:06:08,267Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-07-04 18:06:08,491Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources
WARNING 2019-07-04 18:06:08,491Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'fix_residual_percent_distance_traveled' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T202848/201907022028_201907022122.nc4
WARNING 2019-07-04 18:06:08,492Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'longitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T202848/201907022028_201907022122.nc4
WARNING 2019-07-04 18:06:08,492Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'latitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T202848/201907022028_201907022122.nc4
WARNING 2019-07-04 18:06:08,492Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'depth' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T202848/201907022028_201907022122.nc4
INFO 2019-07-04 18:06:08,503Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge
INFO 2019-07-04 18:06:08,513Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage
WARNING 2019-07-04 18:06:08,514Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'platform_average_current' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T202848/201907022028_201907022122.nc4
INFO 2019-07-04 18:06:08,766Z lrauvNc4ToNetcdf.py createNav():465 platform_pitch_angle -> pitch: {'units': 'rad', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-07-04 18:06:08,944Z lrauvNc4ToNetcdf.py createNav():465 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-07-04 18:06:09,123Z lrauvNc4ToNetcdf.py createNav():465 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-07-04 18:06:09,124Z lrauvNc4ToNetcdf.py nudge_coords():582 /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T202848/201907022028_201907022122.nc4
INFO 2019-07-04 18:06:09,463Z lrauvNc4ToNetcdf.py nudge_coords():600 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s)
INFO 2019-07-04 18:06:09,465Z lrauvNc4ToNetcdf.py nudge_coords():616                  -            -            -       171    1.15              -              -
INFO 2019-07-04 18:06:09,467Z lrauvNc4ToNetcdf.py nudge_coords():638    0:        0.331    0.0000912   -0.0000215       119    0.80          -3.12          -4.95
INFO 2019-07-04 18:06:09,473Z lrauvNc4ToNetcdf.py nudge_coords():638    1:        0.363    0.0003041   -0.0000649       156    1.04          -7.26         -11.52
INFO 2019-07-04 18:06:09,479Z lrauvNc4ToNetcdf.py nudge_coords():638    2:        0.356    0.0000490   -0.0000495        96    0.67          -8.63         -13.70
INFO 2019-07-04 18:06:09,485Z lrauvNc4ToNetcdf.py nudge_coords():638    3:        0.369    0.0000392   -0.0000245        80    0.59          -4.85          -7.70
INFO 2019-07-04 18:06:09,491Z lrauvNc4ToNetcdf.py nudge_coords():638    4:        0.372    0.0019782   -0.0001697      3543   23.86          -0.83          -1.32
INFO 2019-07-04 18:06:09,497Z lrauvNc4ToNetcdf.py nudge_coords():638    5:        0.350    0.0006085   -0.0000603      1793   12.12          -0.58          -0.92
INFO 2019-07-04 18:06:09,504Z lrauvNc4ToNetcdf.py nudge_coords():638    6:        0.368    0.0000085    0.0000045        43    0.28           1.84           2.91
INFO 2019-07-04 18:06:09,510Z lrauvNc4ToNetcdf.py nudge_coords():638    7:        0.362    0.0002878    0.0000239       809    5.45           0.51           0.81
INFO 2019-07-04 18:06:09,516Z lrauvNc4ToNetcdf.py nudge_coords():638    8:        0.364    0.0003485    0.0000085       812    5.47           0.18           0.29
INFO 2019-07-04 18:06:09,522Z lrauvNc4ToNetcdf.py nudge_coords():668   10:            -            -            -       363    2.45              -              -
INFO 2019-07-04 18:06:09,522Z lrauvNc4ToNetcdf.py nudge_coords():672 Points in final series = 7814
INFO 2019-07-04 18:06:09,543Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():506 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20190702T192848/20190702T222246/data.csv
INFO 2019-07-04 18:06:09,571Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():529 Found 0 position values from the Tracking database
INFO 2019-07-04 18:06:09,575Z lrauvNc4ToNetcdf.py processResampleNc4File():1073 ['control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_battery_charge', 'health_platform_average_voltage', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time']
INFO 2019-07-04 18:06:09,667Z lrauvNc4ToNetcdf.py processResampleNc4File():1076 Wrote /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T202848/201907022028_201907022122_2S_scieng.nc