INFO 2019-07-04 18:06:10,085Z lrauvNc4ToNetcdf.py processResampleNc4File():937 Reading /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T212246/201907022122_201907022340.nc4 file... INFO 2019-07-04 18:06:10,086Z lrauvNc4ToNetcdf.py processResampleNc4File():938 After copying to /tmp/201907022122_201907022340.nc4 INFO 2019-07-04 18:06:11,350Z lrauvNc4ToNetcdf.py processResampleNc4File():940 Read file /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T212246/201907022122_201907022340.nc4 INFO 2019-07-04 18:06:17,688Z lrauvNc4ToNetcdf.py processResampleNc4File():945 Creating t variable of the time indexes WARNING 2019-07-04 18:06:17,697Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T212246/201907022122_201907022340.nc4 INFO 2019-07-04 18:06:17,728Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2019-07-04 18:06:18,381Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group CTD_NeilBrown parameter sea_water_salinity renaming to salinity INFO 2019-07-04 18:06:19,036Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group CTD_NeilBrown parameter sea_water_temperature renaming to temperature WARNING 2019-07-04 18:06:19,037Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T212246/201907022122_201907022340.nc4 WARNING 2019-07-04 18:06:19,037Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T212246/201907022122_201907022340.nc4 INFO 2019-07-04 18:06:19,100Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle WARNING 2019-07-04 18:06:19,100Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T212246/201907022122_201907022340.nc4 INFO 2019-07-04 18:06:19,111Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2019-07-04 18:06:19,116Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2019-07-04 18:06:19,121Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2019-07-04 18:06:19,126Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude WARNING 2019-07-04 18:06:19,126Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'downwelling_photosynthetic_photon_flux_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T212246/201907022122_201907022340.nc4 INFO 2019-07-04 18:06:19,338Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2019-07-04 18:06:19,636Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate WARNING 2019-07-04 18:06:19,636Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'mass_concentration_of_chlorophyll_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T212246/201907022122_201907022340.nc4 WARNING 2019-07-04 18:06:19,636Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'Output470' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T212246/201907022122_201907022340.nc4 WARNING 2019-07-04 18:06:19,636Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'Output650' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T212246/201907022122_201907022340.nc4 INFO 2019-07-04 18:06:19,772Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group WetLabsSeaOWL_UV_A parameter concentration_of_chromophoric_dissolved_organic_matter_in_sea_water renaming to chromophoric_dissolved_organic_matter INFO 2019-07-04 18:06:19,908Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2019-07-04 18:06:19,909Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable BackscatteringCoeff700nm empty so skipping INFO 2019-07-04 18:06:20,042Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group WetLabsSeaOWL_UV_A parameter VolumeScatCoeff117deg700nm renaming to VolumeScatCoeff117deg700nm INFO 2019-07-04 18:06:20,177Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_petroleum_hydrocarbons_in_sea_water renaming to petroleum_hydrocarbons INFO 2019-07-04 18:06:20,182Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2019-07-04 18:06:20,574Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2019-07-04 18:06:20,968Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2019-07-04 18:06:21,366Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources WARNING 2019-07-04 18:06:21,367Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'fix_residual_percent_distance_traveled' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T212246/201907022122_201907022340.nc4 WARNING 2019-07-04 18:06:21,367Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'longitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T212246/201907022122_201907022340.nc4 WARNING 2019-07-04 18:06:21,367Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'latitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T212246/201907022122_201907022340.nc4 WARNING 2019-07-04 18:06:21,367Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'depth' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T212246/201907022122_201907022340.nc4 INFO 2019-07-04 18:06:21,377Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2019-07-04 18:06:21,384Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage WARNING 2019-07-04 18:06:21,385Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'platform_average_current' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T212246/201907022122_201907022340.nc4 INFO 2019-07-04 18:06:21,780Z lrauvNc4ToNetcdf.py createNav():465 platform_pitch_angle -> pitch: {'units': 'rad', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-07-04 18:06:22,171Z lrauvNc4ToNetcdf.py createNav():465 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-07-04 18:06:22,564Z lrauvNc4ToNetcdf.py createNav():465 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-07-04 18:06:22,566Z lrauvNc4ToNetcdf.py nudge_coords():582 /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T212246/201907022122_201907022340.nc4 INFO 2019-07-04 18:06:23,186Z lrauvNc4ToNetcdf.py nudge_coords():600 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) INFO 2019-07-04 18:06:23,189Z lrauvNc4ToNetcdf.py nudge_coords():616 - - - 445 2.99 - - INFO 2019-07-04 18:06:23,193Z lrauvNc4ToNetcdf.py nudge_coords():638 0: 0.300 0.0001579 -0.0000364 163 1.11 -3.84 -6.08 INFO 2019-07-04 18:06:23,199Z lrauvNc4ToNetcdf.py nudge_coords():638 1: 0.368 0.0000148 -0.0000167 175 1.29 -1.52 -2.41 INFO 2019-07-04 18:06:23,205Z lrauvNc4ToNetcdf.py nudge_coords():638 2: 0.365 0.0006976 -0.0011817 3189 21.48 -6.42 -10.19 INFO 2019-07-04 18:06:23,211Z lrauvNc4ToNetcdf.py nudge_coords():638 3: 0.339 0.0003003 -0.0001008 481 3.27 -3.60 -5.72 INFO 2019-07-04 18:06:23,217Z lrauvNc4ToNetcdf.py nudge_coords():638 4: 0.389 0.0012348 -0.0020798 3301 22.24 -10.95 -17.33 INFO 2019-07-04 18:06:23,224Z lrauvNc4ToNetcdf.py nudge_coords():638 5: 0.345 0.0002198 0.0000649 556 3.79 2.00 3.17 INFO 2019-07-04 18:06:23,230Z lrauvNc4ToNetcdf.py nudge_coords():638 6: 0.358 0.0015424 -0.0012055 3302 22.25 -6.34 -10.04 INFO 2019-07-04 18:06:23,236Z lrauvNc4ToNetcdf.py nudge_coords():638 7: 0.366 0.0005010 -0.0001542 552 3.76 -4.80 -7.60 INFO 2019-07-04 18:06:23,242Z lrauvNc4ToNetcdf.py nudge_coords():638 8: 0.364 0.0010759 -0.0018731 3683 24.82 -8.82 -13.98 INFO 2019-07-04 18:06:23,249Z lrauvNc4ToNetcdf.py nudge_coords():638 9: 0.370 0.0001919 -0.0000660 309 2.10 -3.68 -5.84 INFO 2019-07-04 18:06:23,255Z lrauvNc4ToNetcdf.py nudge_coords():638 10: 0.366 0.0004780 -0.0009676 2401 16.17 -6.98 -11.09 INFO 2019-07-04 18:06:23,261Z lrauvNc4ToNetcdf.py nudge_coords():638 11: 0.331 0.0006630 0.0006493 1134 7.65 9.91 15.72 INFO 2019-07-04 18:06:23,267Z lrauvNc4ToNetcdf.py nudge_coords():668 13: - - - 632 4.26 - - INFO 2019-07-04 18:06:23,267Z lrauvNc4ToNetcdf.py nudge_coords():672 Points in final series = 20323 INFO 2019-07-04 18:06:23,288Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():506 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20190702T202247/20190703T004002/data.csv INFO 2019-07-04 18:06:23,322Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():529 Found 0 position values from the Tracking database INFO 2019-07-04 18:06:23,326Z lrauvNc4ToNetcdf.py processResampleNc4File():1073 ['control_inputs_buoyancy_position', 'salinity', 'temperature', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'chromophoric_dissolved_organic_matter', 'chlorophyll', 'VolumeScatCoeff117deg700nm', 'petroleum_hydrocarbons', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_battery_charge', 'health_platform_average_voltage', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] INFO 2019-07-04 18:06:23,471Z lrauvNc4ToNetcdf.py processResampleNc4File():1076 Wrote /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T212246/201907022122_201907022340_2S_scieng.nc