INFO 2019-07-04 18:06:23,665Z lrauvNc4ToNetcdf.py processResampleNc4File():937 Reading /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T234002/201907022340_201907030017.nc4 file...
INFO 2019-07-04 18:06:23,666Z lrauvNc4ToNetcdf.py processResampleNc4File():938 After copying to /tmp/201907022340_201907030017.nc4
INFO 2019-07-04 18:06:24,897Z lrauvNc4ToNetcdf.py processResampleNc4File():940 Read file /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T234002/201907022340_201907030017.nc4
INFO 2019-07-04 18:06:26,889Z lrauvNc4ToNetcdf.py processResampleNc4File():945 Creating t variable of the time indexes
WARNING 2019-07-04 18:06:26,895Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T234002/201907022340_201907030017.nc4
INFO 2019-07-04 18:06:26,910Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position
INFO 2019-07-04 18:06:26,911Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable sea_water_salinity empty so skipping
INFO 2019-07-04 18:06:26,913Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable sea_water_temperature empty so skipping
WARNING 2019-07-04 18:06:26,914Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T234002/201907022340_201907030017.nc4
WARNING 2019-07-04 18:06:26,914Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T234002/201907022340_201907030017.nc4
INFO 2019-07-04 18:06:26,926Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle
WARNING 2019-07-04 18:06:26,926Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T234002/201907022340_201907030017.nc4
INFO 2019-07-04 18:06:26,932Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position
INFO 2019-07-04 18:06:26,937Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group NAL9602 parameter time_fix renaming to fix_time
INFO 2019-07-04 18:06:26,941Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude
INFO 2019-07-04 18:06:26,946Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude
WARNING 2019-07-04 18:06:26,946Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'downwelling_photosynthetic_photon_flux_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T234002/201907022340_201907030017.nc4
INFO 2019-07-04 18:06:26,982Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle
INFO 2019-07-04 18:06:27,068Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate
WARNING 2019-07-04 18:06:27,068Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'mass_concentration_of_chlorophyll_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T234002/201907022340_201907030017.nc4
WARNING 2019-07-04 18:06:27,068Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'Output470' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T234002/201907022340_201907030017.nc4
WARNING 2019-07-04 18:06:27,068Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'Output650' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T234002/201907022340_201907030017.nc4
INFO 2019-07-04 18:06:27,070Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable concentration_of_chromophoric_dissolved_organic_matter_in_sea_water empty so skipping
INFO 2019-07-04 18:06:27,072Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping
INFO 2019-07-04 18:06:27,074Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable BackscatteringCoeff700nm empty so skipping
INFO 2019-07-04 18:06:27,076Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable VolumeScatCoeff117deg700nm empty so skipping
INFO 2019-07-04 18:06:27,078Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable mass_concentration_of_petroleum_hydrocarbons_in_sea_water empty so skipping
INFO 2019-07-04 18:06:27,082Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources
INFO 2019-07-04 18:06:27,191Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-07-04 18:06:27,301Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-07-04 18:06:27,410Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources
WARNING 2019-07-04 18:06:27,411Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'fix_residual_percent_distance_traveled' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T234002/201907022340_201907030017.nc4
WARNING 2019-07-04 18:06:27,411Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'longitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T234002/201907022340_201907030017.nc4
WARNING 2019-07-04 18:06:27,411Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'latitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T234002/201907022340_201907030017.nc4
WARNING 2019-07-04 18:06:27,411Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'depth' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T234002/201907022340_201907030017.nc4
INFO 2019-07-04 18:06:27,420Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge
INFO 2019-07-04 18:06:27,427Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage
WARNING 2019-07-04 18:06:27,427Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'platform_average_current' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T234002/201907022340_201907030017.nc4
INFO 2019-07-04 18:06:27,561Z lrauvNc4ToNetcdf.py createNav():465 platform_pitch_angle -> pitch: {'units': 'rad', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-07-04 18:06:27,694Z lrauvNc4ToNetcdf.py createNav():465 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-07-04 18:06:27,826Z lrauvNc4ToNetcdf.py createNav():465 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-07-04 18:06:27,827Z lrauvNc4ToNetcdf.py nudge_coords():582 /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T234002/201907022340_201907030017.nc4
INFO 2019-07-04 18:06:28,104Z lrauvNc4ToNetcdf.py nudge_coords():600 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s)
INFO 2019-07-04 18:06:28,105Z lrauvNc4ToNetcdf.py nudge_coords():616                  -            -            -       253    1.70              -              -
INFO 2019-07-04 18:06:28,108Z lrauvNc4ToNetcdf.py nudge_coords():638    0:        0.343    0.0000572    0.0000428        71    0.51           9.81          15.56
INFO 2019-07-04 18:06:28,113Z lrauvNc4ToNetcdf.py nudge_coords():638    1:        0.341    0.0000720    0.0000437        91    0.61           8.41          13.33
INFO 2019-07-04 18:06:28,119Z lrauvNc4ToNetcdf.py nudge_coords():638    2:        0.349    0.0032666    0.0001464      4397   29.62           0.58           0.92
INFO 2019-07-04 18:06:28,126Z lrauvNc4ToNetcdf.py nudge_coords():638    3:        0.372    0.0001363   -0.0000219       374    2.53          -1.02          -1.60
INFO 2019-07-04 18:06:28,132Z lrauvNc4ToNetcdf.py nudge_coords():638    4:        0.356    0.0000005   -0.0000173        42    0.28          -7.31         -11.55
INFO 2019-07-04 18:06:28,138Z lrauvNc4ToNetcdf.py nudge_coords():668    6:            -            -            -       287    1.93              -              -
INFO 2019-07-04 18:06:28,138Z lrauvNc4ToNetcdf.py nudge_coords():672 Points in final series = 5262
INFO 2019-07-04 18:06:28,157Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():506 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20190702T224002/20190703T011715/data.csv
INFO 2019-07-04 18:06:28,186Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():529 Found 0 position values from the Tracking database
INFO 2019-07-04 18:06:28,190Z lrauvNc4ToNetcdf.py processResampleNc4File():1073 ['control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_battery_charge', 'health_platform_average_voltage', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time']
INFO 2019-07-04 18:06:28,345Z lrauvNc4ToNetcdf.py processResampleNc4File():1076 Wrote /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190702T234002/201907022340_201907030017_2S_scieng.nc