INFO 2019-07-04 18:12:42,763Z lrauvNc4ToNetcdf.py processResampleNc4File():937 Reading /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190703T052546/201907030525_201907031600.nc4 file... INFO 2019-07-04 18:12:42,764Z lrauvNc4ToNetcdf.py processResampleNc4File():938 After copying to /tmp/201907030525_201907031600.nc4 INFO 2019-07-04 18:12:43,740Z lrauvNc4ToNetcdf.py processResampleNc4File():940 Read file /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190703T052546/201907030525_201907031600.nc4 INFO 2019-07-04 18:13:11,500Z lrauvNc4ToNetcdf.py processResampleNc4File():945 Creating t variable of the time indexes WARNING 2019-07-04 18:13:11,515Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190703T052546/201907030525_201907031600.nc4 INFO 2019-07-04 18:13:11,518Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable sea_water_salinity empty so skipping INFO 2019-07-04 18:13:11,519Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable sea_water_temperature empty so skipping WARNING 2019-07-04 18:13:11,520Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190703T052546/201907030525_201907031600.nc4 WARNING 2019-07-04 18:13:11,520Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190703T052546/201907030525_201907031600.nc4 WARNING 2019-07-04 18:13:11,520Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190703T052546/201907030525_201907031600.nc4 WARNING 2019-07-04 18:13:11,520Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'downwelling_photosynthetic_photon_flux_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190703T052546/201907030525_201907031600.nc4 WARNING 2019-07-04 18:13:11,521Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'mass_concentration_of_chlorophyll_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190703T052546/201907030525_201907031600.nc4 WARNING 2019-07-04 18:13:11,521Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'Output470' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190703T052546/201907030525_201907031600.nc4 WARNING 2019-07-04 18:13:11,521Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'Output650' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190703T052546/201907030525_201907031600.nc4 INFO 2019-07-04 18:13:11,526Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group WetLabsSeaOWL_UV_A parameter concentration_of_chromophoric_dissolved_organic_matter_in_sea_water renaming to chromophoric_dissolved_organic_matter INFO 2019-07-04 18:13:11,531Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll INFO 2019-07-04 18:13:11,532Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable BackscatteringCoeff700nm empty so skipping INFO 2019-07-04 18:13:11,537Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group WetLabsSeaOWL_UV_A parameter VolumeScatCoeff117deg700nm renaming to VolumeScatCoeff117deg700nm INFO 2019-07-04 18:13:11,541Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_petroleum_hydrocarbons_in_sea_water renaming to petroleum_hydrocarbons INFO 2019-07-04 18:13:11,544Z lrauvNc4ToNetcdf.py nudge_coords():582 /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190703T052546/201907030525_201907031600.nc4 INFO 2019-07-04 18:13:13,719Z lrauvNc4ToNetcdf.py nudge_coords():600 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) INFO 2019-07-04 18:13:13,721Z lrauvNc4ToNetcdf.py nudge_coords():616 - - - 0 0.00 - - INFO 2019-07-04 18:13:13,731Z lrauvNc4ToNetcdf.py nudge_coords():638 0: 0.356 -0.0009700 0.0003583 896 6.05 6.95 10.97 INFO 2019-07-04 18:13:13,737Z lrauvNc4ToNetcdf.py nudge_coords():638 1: 0.351 -0.0001055 0.0000380 124 0.85 5.27 8.32 INFO 2019-07-04 18:13:13,744Z lrauvNc4ToNetcdf.py nudge_coords():638 2: 0.389 -0.0002390 0.0001303 133 1.87 8.18 12.92 INFO 2019-07-04 18:13:13,750Z lrauvNc4ToNetcdf.py nudge_coords():638 3: 0.365 0.0059589 -0.0032077 6713 45.20 -8.32 -13.15 INFO 2019-07-04 18:13:13,757Z lrauvNc4ToNetcdf.py nudge_coords():638 4: 0.360 -0.0000795 0.0000203 70 0.48 4.97 7.85 INFO 2019-07-04 18:13:13,764Z lrauvNc4ToNetcdf.py nudge_coords():638 5: 0.369 0.0035848 0.0001321 6450 43.43 0.36 0.56 INFO 2019-07-04 18:13:13,771Z lrauvNc4ToNetcdf.py nudge_coords():638 6: 0.349 -0.0001338 0.0000447 78 0.54 9.93 15.40 INFO 2019-07-04 18:13:13,777Z lrauvNc4ToNetcdf.py nudge_coords():638 7: 0.352 0.0003759 -0.0032347 7198 48.47 -7.96 -12.37 INFO 2019-07-04 18:13:13,785Z lrauvNc4ToNetcdf.py nudge_coords():638 8: 0.324 -0.0001080 0.0000627 74 0.51 14.79 22.98 INFO 2019-07-04 18:13:13,791Z lrauvNc4ToNetcdf.py nudge_coords():638 9: 0.369 0.0034621 0.0004886 5461 36.77 1.56 2.46 INFO 2019-07-04 18:13:13,798Z lrauvNc4ToNetcdf.py nudge_coords():638 10: 0.373 -0.0000915 0.0001140 117 0.78 17.10 26.91 INFO 2019-07-04 18:13:13,805Z lrauvNc4ToNetcdf.py nudge_coords():638 11: 0.325 -0.0012441 -0.0017311 5766 38.82 -5.22 -8.26 INFO 2019-07-04 18:13:13,812Z lrauvNc4ToNetcdf.py nudge_coords():638 12: 0.355 -0.0001415 0.0001808 286 1.93 10.98 17.36 INFO 2019-07-04 18:13:13,818Z lrauvNc4ToNetcdf.py nudge_coords():638 13: 0.374 -0.0011372 -0.0007316 2406 16.20 -5.30 -8.37 INFO 2019-07-04 18:13:13,825Z lrauvNc4ToNetcdf.py nudge_coords():638 14: 0.369 -0.0001560 0.0000143 65 0.44 3.81 6.02 INFO 2019-07-04 18:13:13,832Z lrauvNc4ToNetcdf.py nudge_coords():638 15: 0.353 0.0042685 -0.0003620 5975 40.23 -1.07 -1.67 INFO 2019-07-04 18:13:13,839Z lrauvNc4ToNetcdf.py nudge_coords():638 16: 0.320 -0.0000738 0.0000947 66 0.45 25.08 38.94 INFO 2019-07-04 18:13:13,846Z lrauvNc4ToNetcdf.py nudge_coords():638 17: 0.386 0.0008067 -0.0032542 7079 47.67 -8.14 -12.65 INFO 2019-07-04 18:13:13,853Z lrauvNc4ToNetcdf.py nudge_coords():638 18: 0.361 0.0001975 0.0006338 868 5.89 12.85 19.94 INFO 2019-07-04 18:13:13,860Z lrauvNc4ToNetcdf.py nudge_coords():638 19: 0.356 0.0045162 0.0005645 5848 39.39 1.69 2.66 INFO 2019-07-04 18:13:13,867Z lrauvNc4ToNetcdf.py nudge_coords():638 20: 0.372 0.0000078 0.0000565 66 0.45 14.64 23.05 INFO 2019-07-04 18:13:13,873Z lrauvNc4ToNetcdf.py nudge_coords():638 21: 0.402 -0.0006680 -0.0016479 5105 34.38 -5.62 -8.88 INFO 2019-07-04 18:13:13,880Z lrauvNc4ToNetcdf.py nudge_coords():638 22: 0.331 0.0000272 0.0000452 62 0.42 12.55 19.85 INFO 2019-07-04 18:13:13,887Z lrauvNc4ToNetcdf.py nudge_coords():638 23: 0.365 0.0007190 -0.0005405 1724 11.60 -5.47 -8.63 INFO 2019-07-04 18:13:13,894Z lrauvNc4ToNetcdf.py nudge_coords():638 24: 0.350 0.0000538 0.0000398 64 0.44 10.75 16.96 INFO 2019-07-04 18:13:13,900Z lrauvNc4ToNetcdf.py nudge_coords():638 25: 0.385 0.0049377 0.0001112 6198 41.73 0.32 0.49 INFO 2019-07-04 18:13:13,908Z lrauvNc4ToNetcdf.py nudge_coords():638 26: 0.368 0.0000575 0.0000105 74 0.50 2.50 3.88 INFO 2019-07-04 18:13:13,915Z lrauvNc4ToNetcdf.py nudge_coords():638 27: 0.365 0.0018248 -0.0033436 7169 48.27 -8.26 -12.84 INFO 2019-07-04 18:13:13,922Z lrauvNc4ToNetcdf.py nudge_coords():638 28: 0.372 0.0000993 0.0000130 65 0.44 3.51 5.45 INFO 2019-07-04 18:13:13,929Z lrauvNc4ToNetcdf.py nudge_coords():638 29: 0.375 0.0049859 0.0003411 5187 34.92 1.15 1.81 INFO 2019-07-04 18:13:13,936Z lrauvNc4ToNetcdf.py nudge_coords():638 30: 0.367 0.0010323 0.0001357 828 5.58 2.86 4.51 INFO 2019-07-04 18:13:13,943Z lrauvNc4ToNetcdf.py nudge_coords():638 31: 0.377 0.0010650 0.0000682 850 5.73 1.40 2.21 INFO 2019-07-04 18:13:13,949Z lrauvNc4ToNetcdf.py nudge_coords():638 32: 0.364 -0.0010295 -0.0002743 4623 31.24 -1.03 -1.63 INFO 2019-07-04 18:13:13,957Z lrauvNc4ToNetcdf.py nudge_coords():638 33: 0.363 0.0010367 -0.0001468 744 5.04 -3.42 -5.40 INFO 2019-07-04 18:13:13,964Z lrauvNc4ToNetcdf.py nudge_coords():668 35: - - - 4805 32.36 - - INFO 2019-07-04 18:13:13,964Z lrauvNc4ToNetcdf.py nudge_coords():672 Points in final series = 93237 INFO 2019-07-04 18:13:13,981Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():506 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20190703T042556/20190703T170007/data.csv INFO 2019-07-04 18:13:14,034Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():529 Found 0 position values from the Tracking database INFO 2019-07-04 18:13:14,041Z lrauvNc4ToNetcdf.py processResampleNc4File():1073 ['chromophoric_dissolved_organic_matter', 'chlorophyll', 'VolumeScatCoeff117deg700nm', 'petroleum_hydrocarbons', 'latitude', 'longitude', 'depth', 'time'] INFO 2019-07-04 18:13:14,296Z lrauvNc4ToNetcdf.py processResampleNc4File():1076 Wrote /mbari/LRAUV/whoidhs/missionlogs/2019/20190701_20190703/20190703T052546/201907030525_201907031600_10S_sci.nc