INFO 2019-07-19 18:24:52,841Z lrauvNc4ToNetcdf.py processResampleNc4File():937 Reading /mbari/LRAUV/whoidhs/missionlogs/2019/20190716_20190718/20190717T141331/201907171413_201907171533.nc4 file...
INFO 2019-07-19 18:24:52,842Z lrauvNc4ToNetcdf.py processResampleNc4File():938 After copying to /tmp/201907171413_201907171533.nc4
INFO 2019-07-19 18:24:53,979Z lrauvNc4ToNetcdf.py processResampleNc4File():940 Read file /mbari/LRAUV/whoidhs/missionlogs/2019/20190716_20190718/20190717T141331/201907171413_201907171533.nc4
INFO 2019-07-19 18:24:57,805Z lrauvNc4ToNetcdf.py processResampleNc4File():945 Creating t variable of the time indexes
WARNING 2019-07-19 18:24:57,812Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190716_20190718/20190717T141331/201907171413_201907171533.nc4
INFO 2019-07-19 18:24:57,814Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable sea_water_salinity empty so skipping
INFO 2019-07-19 18:24:57,816Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable sea_water_temperature empty so skipping
WARNING 2019-07-19 18:24:57,816Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190716_20190718/20190717T141331/201907171413_201907171533.nc4
WARNING 2019-07-19 18:24:57,816Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190716_20190718/20190717T141331/201907171413_201907171533.nc4
WARNING 2019-07-19 18:24:57,817Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190716_20190718/20190717T141331/201907171413_201907171533.nc4
WARNING 2019-07-19 18:24:57,817Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'downwelling_photosynthetic_photon_flux_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190716_20190718/20190717T141331/201907171413_201907171533.nc4
WARNING 2019-07-19 18:24:57,817Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'mass_concentration_of_chlorophyll_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190716_20190718/20190717T141331/201907171413_201907171533.nc4
WARNING 2019-07-19 18:24:57,817Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'Output470' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190716_20190718/20190717T141331/201907171413_201907171533.nc4
WARNING 2019-07-19 18:24:57,817Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'Output650' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190716_20190718/20190717T141331/201907171413_201907171533.nc4
INFO 2019-07-19 18:24:57,822Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group WetLabsSeaOWL_UV_A parameter concentration_of_chromophoric_dissolved_organic_matter_in_sea_water renaming to chromophoric_dissolved_organic_matter
INFO 2019-07-19 18:24:57,827Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_chlorophyll_in_sea_water renaming to chlorophyll
INFO 2019-07-19 18:24:57,829Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable BackscatteringCoeff700nm empty so skipping
INFO 2019-07-19 18:24:57,833Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group WetLabsSeaOWL_UV_A parameter VolumeScatCoeff117deg700nm renaming to VolumeScatCoeff117deg700nm
INFO 2019-07-19 18:24:57,837Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group WetLabsSeaOWL_UV_A parameter mass_concentration_of_petroleum_hydrocarbons_in_sea_water renaming to petroleum_hydrocarbons
INFO 2019-07-19 18:24:57,838Z lrauvNc4ToNetcdf.py nudge_coords():582 /mbari/LRAUV/whoidhs/missionlogs/2019/20190716_20190718/20190717T141331/201907171413_201907171533.nc4
INFO 2019-07-19 18:24:58,241Z lrauvNc4ToNetcdf.py nudge_coords():600 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s)
INFO 2019-07-19 18:24:58,242Z lrauvNc4ToNetcdf.py nudge_coords():616                  -            -            -         0    0.00              -              -
INFO 2019-07-19 18:24:58,245Z lrauvNc4ToNetcdf.py nudge_coords():638    0:        0.395    0.0000686    0.0000031       189    1.27           0.29           0.45
INFO 2019-07-19 18:24:58,251Z lrauvNc4ToNetcdf.py nudge_coords():638    1:        0.392    0.0000682    0.0000597       641    4.31           1.62           2.57
INFO 2019-07-19 18:24:58,257Z lrauvNc4ToNetcdf.py nudge_coords():638    2:        0.304   -0.0000046    0.0000008        87    0.58           0.16           0.25
INFO 2019-07-19 18:24:58,263Z lrauvNc4ToNetcdf.py nudge_coords():638    3:        0.368    0.0002106   -0.0010597      9834   66.22          -1.87          -2.97
INFO 2019-07-19 18:24:58,270Z lrauvNc4ToNetcdf.py nudge_coords():638    4:        0.219    0.0001185   -0.0000554       800    5.38          -1.20          -1.91
INFO 2019-07-19 18:24:58,276Z lrauvNc4ToNetcdf.py nudge_coords():668    6:            -            -            -        48    0.32              -              -
INFO 2019-07-19 18:24:58,276Z lrauvNc4ToNetcdf.py nudge_coords():672 Points in final series = 11599
INFO 2019-07-19 18:24:58,293Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():506 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20190717T131342/20190717T163340/data.csv
INFO 2019-07-19 18:24:58,320Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():529 Found 0 position values from the Tracking database
INFO 2019-07-19 18:24:58,324Z lrauvNc4ToNetcdf.py processResampleNc4File():1073 ['chromophoric_dissolved_organic_matter', 'chlorophyll', 'VolumeScatCoeff117deg700nm', 'petroleum_hydrocarbons', 'latitude', 'longitude', 'depth', 'time']
INFO 2019-07-19 18:24:58,408Z lrauvNc4ToNetcdf.py processResampleNc4File():1076 Wrote /mbari/LRAUV/whoidhs/missionlogs/2019/20190716_20190718/20190717T141331/201907171413_201907171533_10S_sci.nc