INFO 2019-07-19 18:19:35,912Z lrauvNc4ToNetcdf.py processResampleNc4File():937 Reading /mbari/LRAUV/whoidhs/missionlogs/2019/20190716_20190718/20190717T171355/201907171713_201907171759.nc4 file...
INFO 2019-07-19 18:19:35,913Z lrauvNc4ToNetcdf.py processResampleNc4File():938 After copying to /tmp/201907171713_201907171759.nc4
INFO 2019-07-19 18:19:37,272Z lrauvNc4ToNetcdf.py processResampleNc4File():940 Read file /mbari/LRAUV/whoidhs/missionlogs/2019/20190716_20190718/20190717T171355/201907171713_201907171759.nc4
INFO 2019-07-19 18:19:39,530Z lrauvNc4ToNetcdf.py processResampleNc4File():945 Creating t variable of the time indexes
WARNING 2019-07-19 18:19:39,536Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190716_20190718/20190717T171355/201907171713_201907171759.nc4
INFO 2019-07-19 18:19:39,551Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position
INFO 2019-07-19 18:19:39,552Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable sea_water_salinity empty so skipping
INFO 2019-07-19 18:19:39,554Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable sea_water_temperature empty so skipping
WARNING 2019-07-19 18:19:39,555Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190716_20190718/20190717T171355/201907171713_201907171759.nc4
WARNING 2019-07-19 18:19:39,555Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190716_20190718/20190717T171355/201907171713_201907171759.nc4
INFO 2019-07-19 18:19:39,567Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle
WARNING 2019-07-19 18:19:39,567Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190716_20190718/20190717T171355/201907171713_201907171759.nc4
INFO 2019-07-19 18:19:39,572Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position
INFO 2019-07-19 18:19:39,577Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group NAL9602 parameter time_fix renaming to fix_time
INFO 2019-07-19 18:19:39,582Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude
INFO 2019-07-19 18:19:39,586Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude
WARNING 2019-07-19 18:19:39,586Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'downwelling_photosynthetic_photon_flux_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190716_20190718/20190717T171355/201907171713_201907171759.nc4
INFO 2019-07-19 18:19:39,635Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle
INFO 2019-07-19 18:19:39,730Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate
WARNING 2019-07-19 18:19:39,730Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'mass_concentration_of_chlorophyll_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190716_20190718/20190717T171355/201907171713_201907171759.nc4
WARNING 2019-07-19 18:19:39,730Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'Output470' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190716_20190718/20190717T171355/201907171713_201907171759.nc4
WARNING 2019-07-19 18:19:39,731Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'Output650' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190716_20190718/20190717T171355/201907171713_201907171759.nc4
INFO 2019-07-19 18:19:39,733Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable concentration_of_chromophoric_dissolved_organic_matter_in_sea_water empty so skipping
INFO 2019-07-19 18:19:39,734Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping
INFO 2019-07-19 18:19:39,736Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable BackscatteringCoeff700nm empty so skipping
INFO 2019-07-19 18:19:39,738Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable VolumeScatCoeff117deg700nm empty so skipping
INFO 2019-07-19 18:19:39,740Z lrauvNc4ToNetcdf.py processResampleNc4File():983 Variable mass_concentration_of_petroleum_hydrocarbons_in_sea_water empty so skipping
INFO 2019-07-19 18:19:39,744Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources
INFO 2019-07-19 18:19:39,876Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-07-19 18:19:40,010Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-07-19 18:19:40,142Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources
WARNING 2019-07-19 18:19:40,143Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'fix_residual_percent_distance_traveled' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190716_20190718/20190717T171355/201907171713_201907171759.nc4
WARNING 2019-07-19 18:19:40,143Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'longitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190716_20190718/20190717T171355/201907171713_201907171759.nc4
WARNING 2019-07-19 18:19:40,143Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'latitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190716_20190718/20190717T171355/201907171713_201907171759.nc4
WARNING 2019-07-19 18:19:40,143Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'depth' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190716_20190718/20190717T171355/201907171713_201907171759.nc4
INFO 2019-07-19 18:19:40,151Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge
INFO 2019-07-19 18:19:40,158Z lrauvNc4ToNetcdf.py processResampleNc4File():1020 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage
WARNING 2019-07-19 18:19:40,159Z lrauvNc4ToNetcdf.py processResampleNc4File():1022 'platform_average_current' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190716_20190718/20190717T171355/201907171713_201907171759.nc4
INFO 2019-07-19 18:19:40,307Z lrauvNc4ToNetcdf.py createNav():465 platform_pitch_angle -> pitch: {'units': 'rad', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-07-19 18:19:40,456Z lrauvNc4ToNetcdf.py createNav():465 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-07-19 18:19:40,604Z lrauvNc4ToNetcdf.py createNav():465 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-07-19 18:19:40,606Z lrauvNc4ToNetcdf.py nudge_coords():582 /mbari/LRAUV/whoidhs/missionlogs/2019/20190716_20190718/20190717T171355/201907171713_201907171759.nc4
INFO 2019-07-19 18:19:40,881Z lrauvNc4ToNetcdf.py nudge_coords():600 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s)
INFO 2019-07-19 18:19:40,884Z lrauvNc4ToNetcdf.py nudge_coords():616                  -            -            -       748    5.03              -              -
INFO 2019-07-19 18:19:40,886Z lrauvNc4ToNetcdf.py nudge_coords():638    0:        0.376   -0.0000033    0.0000012        66    0.44           0.32           0.50
INFO 2019-07-19 18:19:40,892Z lrauvNc4ToNetcdf.py nudge_coords():638    1:        0.360    0.0000101   -0.0000169       155    1.04          -1.91          -3.02
INFO 2019-07-19 18:19:40,898Z lrauvNc4ToNetcdf.py nudge_coords():638    2:        0.354    0.0008359   -0.0005930      5289   35.63          -1.95          -3.08
INFO 2019-07-19 18:19:40,905Z lrauvNc4ToNetcdf.py nudge_coords():668    4:            -            -            -       438    2.95              -              -
INFO 2019-07-19 18:19:40,905Z lrauvNc4ToNetcdf.py nudge_coords():672 Points in final series = 6696
INFO 2019-07-19 18:19:40,920Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():506 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20190717T161355/20190717T185901/data.csv
INFO 2019-07-19 18:19:40,947Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():529 Found 0 position values from the Tracking database
INFO 2019-07-19 18:19:40,951Z lrauvNc4ToNetcdf.py processResampleNc4File():1073 ['control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_battery_charge', 'health_platform_average_voltage', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time']
INFO 2019-07-19 18:19:41,126Z lrauvNc4ToNetcdf.py processResampleNc4File():1076 Wrote /mbari/LRAUV/whoidhs/missionlogs/2019/20190716_20190718/20190717T171355/201907171713_201907171759_2S_scieng.nc