INFO 2019-10-08 18:47:25,778Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Reading /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190825T011646/201908250116_201908251721.nc4 file... INFO 2019-10-08 18:47:25,778Z lrauvNc4ToNetcdf.py processResampleNc4File():960 After copying to /tmp/201908250116_201908251721.nc4 INFO 2019-10-08 18:47:27,067Z lrauvNc4ToNetcdf.py processResampleNc4File():962 Read file /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190825T011646/201908250116_201908251721.nc4 INFO 2019-10-08 18:48:10,848Z lrauvNc4ToNetcdf.py processResampleNc4File():967 Creating t variable of the time indexes INFO 2019-10-08 18:48:10,988Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2019-10-08 18:48:11,329Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2019-10-08 18:48:11,350Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2019-10-08 18:48:11,358Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2019-10-08 18:48:11,366Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2019-10-08 18:48:11,374Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2019-10-08 18:48:11,866Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2019-10-08 18:48:14,340Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2019-10-08 18:48:14,347Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2019-10-08 18:48:17,143Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2019-10-08 18:48:19,932Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2019-10-08 18:48:22,729Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources WARNING 2019-10-08 18:48:22,729Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 'fix_residual_percent_distance_traveled' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190825T011646/201908250116_201908251721.nc4 WARNING 2019-10-08 18:48:22,729Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 'longitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190825T011646/201908250116_201908251721.nc4 WARNING 2019-10-08 18:48:22,730Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 'latitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190825T011646/201908250116_201908251721.nc4 WARNING 2019-10-08 18:48:22,730Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 'depth' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190825T011646/201908250116_201908251721.nc4 INFO 2019-10-08 18:48:22,742Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2019-10-08 18:48:22,752Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage WARNING 2019-10-08 18:48:22,752Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 'platform_average_current' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190825T011646/201908250116_201908251721.nc4 DEBUG 2019-10-08 18:48:25,364Z lrauvNc4ToNetcdf.py createNav():460 calling ts.resample() for pitch DEBUG 2019-10-08 18:48:25,416Z lrauvNc4ToNetcdf.py createNav():462 calling self.interpolate() for pitch INFO 2019-10-08 18:48:25,418Z lrauvNc4ToNetcdf.py createNav():472 platform_pitch_angle -> pitch: {'units': 'rad', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} DEBUG 2019-10-08 18:48:28,109Z lrauvNc4ToNetcdf.py createNav():460 calling ts.resample() for roll DEBUG 2019-10-08 18:48:28,161Z lrauvNc4ToNetcdf.py createNav():462 calling self.interpolate() for roll INFO 2019-10-08 18:48:28,163Z lrauvNc4ToNetcdf.py createNav():472 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} DEBUG 2019-10-08 18:48:30,757Z lrauvNc4ToNetcdf.py createNav():460 calling ts.resample() for yaw DEBUG 2019-10-08 18:48:30,808Z lrauvNc4ToNetcdf.py createNav():462 calling self.interpolate() for yaw INFO 2019-10-08 18:48:30,809Z lrauvNc4ToNetcdf.py createNav():472 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-10-08 18:48:30,814Z lrauvNc4ToNetcdf.py nudge_coords():592 /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190825T011646/201908250116_201908251721.nc4 DEBUG 2019-10-08 18:48:32,652Z lrauvNc4ToNetcdf.py var_series():580 longitude: rad_to_deg = True DEBUG 2019-10-08 18:48:34,455Z lrauvNc4ToNetcdf.py var_series():580 latitude: rad_to_deg = True DEBUG 2019-10-08 18:48:34,505Z lrauvNc4ToNetcdf.py var_series():580 longitude_fix: rad_to_deg = False DEBUG 2019-10-08 18:48:34,549Z lrauvNc4ToNetcdf.py var_series():580 latitude_fix: rad_to_deg = False INFO 2019-10-08 18:48:34,549Z lrauvNc4ToNetcdf.py nudge_coords():610 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) INFO 2019-10-08 18:48:34,551Z lrauvNc4ToNetcdf.py nudge_coords():626 - - - 238 1.60 - - INFO 2019-10-08 18:48:34,565Z lrauvNc4ToNetcdf.py nudge_coords():648 0: 0.326 -0.0000043 -0.0000502 155 1.04 8.80 -8.92 INFO 2019-10-08 18:48:34,572Z lrauvNc4ToNetcdf.py nudge_coords():648 1: 0.372 -0.0021095 0.0014813 9165 61.73 -4.39 4.45 INFO 2019-10-08 18:48:34,580Z lrauvNc4ToNetcdf.py nudge_coords():648 2: 0.353 0.0002282 -0.0002133 875 5.89 6.63 -6.72 INFO 2019-10-08 18:48:34,586Z lrauvNc4ToNetcdf.py nudge_coords():648 3: 0.355 0.0002752 -0.0002063 801 5.48 6.89 -6.98 INFO 2019-10-08 18:48:34,593Z lrauvNc4ToNetcdf.py nudge_coords():648 4: 0.370 0.0002765 -0.0002333 806 5.46 7.81 -7.92 INFO 2019-10-08 18:48:34,599Z lrauvNc4ToNetcdf.py nudge_coords():648 5: 0.367 0.0000574 -0.0000332 155 1.04 5.84 -5.91 INFO 2019-10-08 18:48:34,606Z lrauvNc4ToNetcdf.py nudge_coords():648 6: 0.338 0.0000498 -0.0000345 123 0.83 7.64 -7.74 INFO 2019-10-08 18:48:34,612Z lrauvNc4ToNetcdf.py nudge_coords():648 7: 0.369 0.0000226 -0.0007123 5732 38.60 3.37 -3.42 INFO 2019-10-08 18:48:34,619Z lrauvNc4ToNetcdf.py nudge_coords():648 8: 0.367 -0.0004598 0.0006789 4613 31.06 -3.99 4.05 INFO 2019-10-08 18:48:34,627Z lrauvNc4ToNetcdf.py nudge_coords():648 9: 0.379 0.0000685 -0.0001957 527 3.54 10.07 -10.23 INFO 2019-10-08 18:48:34,634Z lrauvNc4ToNetcdf.py nudge_coords():648 10: 0.343 -0.0015794 0.0014781 4770 32.12 -8.39 8.53 INFO 2019-10-08 18:48:34,641Z lrauvNc4ToNetcdf.py nudge_coords():648 11: 0.334 0.0001910 -0.0001728 404 2.72 11.59 -11.78 INFO 2019-10-08 18:48:34,648Z lrauvNc4ToNetcdf.py nudge_coords():648 12: 0.360 -0.0016003 0.0013950 4658 31.36 -8.12 8.24 INFO 2019-10-08 18:48:34,655Z lrauvNc4ToNetcdf.py nudge_coords():648 13: 0.364 0.0005753 -0.0002082 1237 8.32 4.57 -4.63 INFO 2019-10-08 18:48:34,662Z lrauvNc4ToNetcdf.py nudge_coords():648 14: 0.363 0.0002145 -0.0001627 830 5.59 5.31 -5.40 INFO 2019-10-08 18:48:34,668Z lrauvNc4ToNetcdf.py nudge_coords():648 15: 0.371 0.0000556 -0.0000494 164 1.10 8.17 -8.29 INFO 2019-10-08 18:48:34,675Z lrauvNc4ToNetcdf.py nudge_coords():648 16: 0.356 0.0000213 -0.0000147 71 0.48 5.62 -5.71 INFO 2019-10-08 18:48:34,681Z lrauvNc4ToNetcdf.py nudge_coords():648 17: 0.358 -0.0006273 0.0015972 7130 48.02 -6.07 6.16 INFO 2019-10-08 18:48:34,688Z lrauvNc4ToNetcdf.py nudge_coords():648 18: 0.300 0.0004002 -0.0002268 548 3.68 11.23 -11.41 INFO 2019-10-08 18:48:34,695Z lrauvNc4ToNetcdf.py nudge_coords():648 19: 0.374 0.0013241 0.0006808 7107 47.86 -2.59 2.64 INFO 2019-10-08 18:48:34,702Z lrauvNc4ToNetcdf.py nudge_coords():648 20: 0.361 0.0005099 -0.0005146 566 3.82 24.56 -24.99 INFO 2019-10-08 18:48:34,709Z lrauvNc4ToNetcdf.py nudge_coords():648 21: 0.357 0.0027986 -0.0012467 7587 51.09 4.45 -4.52 INFO 2019-10-08 18:48:34,717Z lrauvNc4ToNetcdf.py nudge_coords():648 22: 0.357 0.0000802 -0.0000382 113 0.76 9.14 -9.28 INFO 2019-10-08 18:48:34,724Z lrauvNc4ToNetcdf.py nudge_coords():648 23: 0.343 0.0023996 -0.0017551 7716 51.96 6.17 -6.26 INFO 2019-10-08 18:48:34,731Z lrauvNc4ToNetcdf.py nudge_coords():648 24: 0.377 0.0000608 -0.0000110 72 0.48 4.15 -4.21 INFO 2019-10-08 18:48:34,738Z lrauvNc4ToNetcdf.py nudge_coords():648 25: 0.364 0.0024573 -0.0011273 6864 46.22 4.45 -4.52 INFO 2019-10-08 18:48:34,745Z lrauvNc4ToNetcdf.py nudge_coords():648 26: 0.345 0.0001475 -0.0000120 501 3.37 0.65 -0.66 INFO 2019-10-08 18:48:34,753Z lrauvNc4ToNetcdf.py nudge_coords():648 27: 0.348 0.0010697 0.0003987 7313 49.25 -1.48 1.50 INFO 2019-10-08 18:48:34,760Z lrauvNc4ToNetcdf.py nudge_coords():648 28: 0.366 -0.0001050 -0.0000573 454 3.06 3.42 -3.48 INFO 2019-10-08 18:48:34,767Z lrauvNc4ToNetcdf.py nudge_coords():648 29: 0.365 -0.0005394 0.0016533 7509 50.58 -5.96 6.06 INFO 2019-10-08 18:48:34,774Z lrauvNc4ToNetcdf.py nudge_coords():648 30: 0.338 0.0000168 0.0000302 218 1.46 -3.76 3.82 INFO 2019-10-08 18:48:34,781Z lrauvNc4ToNetcdf.py nudge_coords():648 31: 0.365 -0.0002439 0.0016879 7271 48.96 -6.28 6.39 INFO 2019-10-08 18:48:34,789Z lrauvNc4ToNetcdf.py nudge_coords():648 32: 0.379 0.0000762 0.0000070 348 2.34 -0.55 0.55 INFO 2019-10-08 18:48:34,796Z lrauvNc4ToNetcdf.py nudge_coords():648 33: 0.363 -0.0000553 0.0014336 7311 49.24 -5.30 5.40 INFO 2019-10-08 18:48:34,803Z lrauvNc4ToNetcdf.py nudge_coords():648 34: 0.369 0.0001405 -0.0000505 341 2.29 4.01 -4.08 INFO 2019-10-08 18:48:34,810Z lrauvNc4ToNetcdf.py nudge_coords():648 35: 0.328 0.0003015 -0.0001495 7284 49.05 0.56 -0.56 INFO 2019-10-08 18:48:34,818Z lrauvNc4ToNetcdf.py nudge_coords():648 36: 0.344 0.0000402 0.0000003 116 0.78 -0.08 0.08 INFO 2019-10-08 18:48:34,825Z lrauvNc4ToNetcdf.py nudge_coords():648 37: 0.344 0.0009779 -0.0004115 7227 48.67 1.55 -1.57 INFO 2019-10-08 18:48:34,832Z lrauvNc4ToNetcdf.py nudge_coords():648 38: 0.340 0.0000880 0.0000083 374 2.51 -0.61 0.61 INFO 2019-10-08 18:48:34,839Z lrauvNc4ToNetcdf.py nudge_coords():648 39: 0.342 0.0012017 0.0002160 7102 47.85 -0.82 0.84 INFO 2019-10-08 18:48:34,847Z lrauvNc4ToNetcdf.py nudge_coords():648 40: 0.364 -0.0001510 0.0000788 506 3.40 -4.23 4.29 INFO 2019-10-08 18:48:34,854Z lrauvNc4ToNetcdf.py nudge_coords():648 41: 0.329 -0.0004808 0.0008138 7311 49.29 -3.01 3.06 INFO 2019-10-08 18:48:34,862Z lrauvNc4ToNetcdf.py nudge_coords():648 42: 0.365 -0.0000137 0.0000960 343 2.31 -7.59 7.71 INFO 2019-10-08 18:48:34,869Z lrauvNc4ToNetcdf.py nudge_coords():648 43: 0.368 -0.0012089 0.0018140 7648 51.50 -6.42 6.53 INFO 2019-10-08 18:48:34,878Z lrauvNc4ToNetcdf.py nudge_coords():648 44: 0.351 0.0002892 0.0002758 857 5.77 -8.70 8.85 INFO 2019-10-08 18:48:34,885Z lrauvNc4ToNetcdf.py nudge_coords():678 46: - - - 57 0.38 - - INFO 2019-10-08 18:48:34,885Z lrauvNc4ToNetcdf.py nudge_coords():682 Points in final series = 142880 DEBUG 2019-10-08 18:48:34,887Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():508 Constructing trackingdb url to 3600 seconds beyond time range of file INFO 2019-10-08 18:48:34,909Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():516 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20190825T001646/20190825T182100/data.csv INFO 2019-10-08 18:48:34,937Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():539 Found 0 position values from the Tracking database INFO 2019-10-08 18:48:34,951Z lrauvNc4ToNetcdf.py processResampleNc4File():1095 ['control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_battery_charge', 'health_platform_average_voltage', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] DEBUG 2019-10-08 18:48:34,954Z lrauvNc4ToNetcdf.py write_netcdf():120 Creating netCDF file /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190825T011646/201908250116_201908251721_2S_eng.nc DEBUG 2019-10-08 18:48:34,961Z lrauvNc4ToNetcdf.py write_netcdf():144 Adding in record variable fix_time DEBUG 2019-10-08 18:48:35,000Z lrauvNc4ToNetcdf.py write_netcdf():144 Adding in record variable time DEBUG 2019-10-08 18:48:35,008Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_buoyancy_position DEBUG 2019-10-08 18:48:35,012Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_elevator_angle DEBUG 2019-10-08 18:48:35,016Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_mass_position DEBUG 2019-10-08 18:48:35,019Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable fix_latitude DEBUG 2019-10-08 18:48:35,023Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable fix_longitude DEBUG 2019-10-08 18:48:35,027Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_rudder_angle DEBUG 2019-10-08 18:48:35,031Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_propeller_rotation_rate DEBUG 2019-10-08 18:48:35,057Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources DEBUG 2019-10-08 18:48:35,062Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pose_longitude_DeadReckonUsingMultipleVelocitySources DEBUG 2019-10-08 18:48:35,080Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pose_latitude_DeadReckonUsingMultipleVelocitySources DEBUG 2019-10-08 18:48:35,086Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pose_depth_DeadReckonUsingMultipleVelocitySources DEBUG 2019-10-08 18:48:35,090Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable health_platform_battery_charge DEBUG 2019-10-08 18:48:35,094Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable health_platform_average_voltage DEBUG 2019-10-08 18:48:35,098Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pitch DEBUG 2019-10-08 18:48:35,101Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable roll DEBUG 2019-10-08 18:48:35,105Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable yaw DEBUG 2019-10-08 18:48:35,109Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable latitude DEBUG 2019-10-08 18:48:35,113Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable longitude DEBUG 2019-10-08 18:48:35,117Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable depth DEBUG 2019-10-08 18:48:35,121Z lrauvNc4ToNetcdf.py write_netcdf():163 Adding in global metadata INFO 2019-10-08 18:48:35,305Z lrauvNc4ToNetcdf.py processResampleNc4File():1098 Wrote /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190825T011646/201908250116_201908251721_2S_eng.nc