INFO 2019-10-08 18:50:21,073Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Reading /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T165434/201908261654_201908261737.nc4 file...
INFO 2019-10-08 18:50:21,074Z lrauvNc4ToNetcdf.py processResampleNc4File():960 After copying to /tmp/201908261654_201908261737.nc4
INFO 2019-10-08 18:50:22,349Z lrauvNc4ToNetcdf.py processResampleNc4File():962 Read file /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T165434/201908261654_201908261737.nc4
INFO 2019-10-08 18:50:24,660Z lrauvNc4ToNetcdf.py processResampleNc4File():967 Creating t variable of the time indexes
INFO 2019-10-08 18:50:24,679Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position
INFO 2019-10-08 18:50:24,697Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle
INFO 2019-10-08 18:50:24,702Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position
INFO 2019-10-08 18:50:24,708Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group NAL9602 parameter time_fix renaming to fix_time
INFO 2019-10-08 18:50:24,714Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude
INFO 2019-10-08 18:50:24,719Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude
INFO 2019-10-08 18:50:24,746Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle
INFO 2019-10-08 18:50:24,840Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate
INFO 2019-10-08 18:50:24,845Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources
INFO 2019-10-08 18:50:24,976Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-10-08 18:50:25,107Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-10-08 18:50:25,239Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources
WARNING 2019-10-08 18:50:25,239Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 'fix_residual_percent_distance_traveled' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T165434/201908261654_201908261737.nc4
WARNING 2019-10-08 18:50:25,239Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 'longitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T165434/201908261654_201908261737.nc4
WARNING 2019-10-08 18:50:25,240Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 'latitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T165434/201908261654_201908261737.nc4
WARNING 2019-10-08 18:50:25,240Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 'depth' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T165434/201908261654_201908261737.nc4
INFO 2019-10-08 18:50:25,249Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge
INFO 2019-10-08 18:50:25,257Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage
WARNING 2019-10-08 18:50:25,257Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 'platform_average_current' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T165434/201908261654_201908261737.nc4
DEBUG 2019-10-08 18:50:25,400Z lrauvNc4ToNetcdf.py createNav():460 calling ts.resample() for pitch
DEBUG 2019-10-08 18:50:25,408Z lrauvNc4ToNetcdf.py createNav():462 calling self.interpolate() for pitch
INFO 2019-10-08 18:50:25,409Z lrauvNc4ToNetcdf.py createNav():472 platform_pitch_angle -> pitch: {'units': 'rad', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
DEBUG 2019-10-08 18:50:25,554Z lrauvNc4ToNetcdf.py createNav():460 calling ts.resample() for roll
DEBUG 2019-10-08 18:50:25,562Z lrauvNc4ToNetcdf.py createNav():462 calling self.interpolate() for roll
INFO 2019-10-08 18:50:25,563Z lrauvNc4ToNetcdf.py createNav():472 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
DEBUG 2019-10-08 18:50:25,709Z lrauvNc4ToNetcdf.py createNav():460 calling ts.resample() for yaw
DEBUG 2019-10-08 18:50:25,716Z lrauvNc4ToNetcdf.py createNav():462 calling self.interpolate() for yaw
INFO 2019-10-08 18:50:25,717Z lrauvNc4ToNetcdf.py createNav():472 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-10-08 18:50:25,718Z lrauvNc4ToNetcdf.py nudge_coords():592 /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T165434/201908261654_201908261737.nc4
DEBUG 2019-10-08 18:50:25,834Z lrauvNc4ToNetcdf.py var_series():580 longitude: rad_to_deg = True
DEBUG 2019-10-08 18:50:25,958Z lrauvNc4ToNetcdf.py var_series():580 latitude: rad_to_deg = True
DEBUG 2019-10-08 18:50:25,997Z lrauvNc4ToNetcdf.py var_series():580 longitude_fix: rad_to_deg = False
DEBUG 2019-10-08 18:50:26,034Z lrauvNc4ToNetcdf.py var_series():580 latitude_fix: rad_to_deg = False
INFO 2019-10-08 18:50:26,034Z lrauvNc4ToNetcdf.py nudge_coords():610 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s)
INFO 2019-10-08 18:50:26,036Z lrauvNc4ToNetcdf.py nudge_coords():626                  -            -            -         3    0.01              -              -
INFO 2019-10-08 18:50:26,038Z lrauvNc4ToNetcdf.py nudge_coords():648    0:        0.343   -0.0002060    0.0001797       571    3.85          -8.51           8.65
INFO 2019-10-08 18:50:26,045Z lrauvNc4ToNetcdf.py nudge_coords():648    1:        0.336   -0.0013609   -0.0007173      5061   34.08           3.84          -3.90
INFO 2019-10-08 18:50:26,051Z lrauvNc4ToNetcdf.py nudge_coords():648    2:        0.367   -0.0000194    0.0002367       641    4.31         -10.01          10.17
INFO 2019-10-08 18:50:26,057Z lrauvNc4ToNetcdf.py nudge_coords():678    4:            -            -            -       165    1.11              -              -
INFO 2019-10-08 18:50:26,058Z lrauvNc4ToNetcdf.py nudge_coords():682 Points in final series = 6438
DEBUG 2019-10-08 18:50:26,061Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():508 Constructing trackingdb url to 3600 seconds beyond time range of file
INFO 2019-10-08 18:50:26,079Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():516 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20190826T155434/20190826T183757/data.csv
INFO 2019-10-08 18:50:26,105Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():539 Found 0 position values from the Tracking database
INFO 2019-10-08 18:50:26,109Z lrauvNc4ToNetcdf.py processResampleNc4File():1095 ['control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_battery_charge', 'health_platform_average_voltage', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time']
DEBUG 2019-10-08 18:50:26,110Z lrauvNc4ToNetcdf.py write_netcdf():120 Creating netCDF file /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T165434/201908261654_201908261737_2S_eng.nc
DEBUG 2019-10-08 18:50:26,115Z lrauvNc4ToNetcdf.py write_netcdf():144 Adding in record variable fix_time
DEBUG 2019-10-08 18:50:26,128Z lrauvNc4ToNetcdf.py write_netcdf():144 Adding in record variable time
DEBUG 2019-10-08 18:50:26,134Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_buoyancy_position
DEBUG 2019-10-08 18:50:26,139Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_elevator_angle
DEBUG 2019-10-08 18:50:26,144Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_mass_position
DEBUG 2019-10-08 18:50:26,149Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable fix_latitude
DEBUG 2019-10-08 18:50:26,154Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable fix_longitude
DEBUG 2019-10-08 18:50:26,159Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_rudder_angle
DEBUG 2019-10-08 18:50:26,163Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_propeller_rotation_rate
DEBUG 2019-10-08 18:50:26,173Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources
DEBUG 2019-10-08 18:50:26,178Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pose_longitude_DeadReckonUsingMultipleVelocitySources
DEBUG 2019-10-08 18:50:26,189Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pose_latitude_DeadReckonUsingMultipleVelocitySources
DEBUG 2019-10-08 18:50:26,195Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pose_depth_DeadReckonUsingMultipleVelocitySources
DEBUG 2019-10-08 18:50:26,200Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable health_platform_battery_charge
DEBUG 2019-10-08 18:50:26,205Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable health_platform_average_voltage
DEBUG 2019-10-08 18:50:26,210Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pitch
DEBUG 2019-10-08 18:50:26,215Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable roll
DEBUG 2019-10-08 18:50:26,221Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable yaw
DEBUG 2019-10-08 18:50:26,228Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable latitude
DEBUG 2019-10-08 18:50:26,233Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable longitude
DEBUG 2019-10-08 18:50:26,238Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable depth
DEBUG 2019-10-08 18:50:26,243Z lrauvNc4ToNetcdf.py write_netcdf():163 Adding in global metadata
INFO 2019-10-08 18:50:26,400Z lrauvNc4ToNetcdf.py processResampleNc4File():1098 Wrote /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T165434/201908261654_201908261737_2S_eng.nc