INFO 2019-10-08 18:50:26,549Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Reading /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T173757/201908261737_201908261805.nc4 file...
INFO 2019-10-08 18:50:26,550Z lrauvNc4ToNetcdf.py processResampleNc4File():960 After copying to /tmp/201908261737_201908261805.nc4
INFO 2019-10-08 18:50:27,688Z lrauvNc4ToNetcdf.py processResampleNc4File():962 Read file /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T173757/201908261737_201908261805.nc4
INFO 2019-10-08 18:50:29,365Z lrauvNc4ToNetcdf.py processResampleNc4File():967 Creating t variable of the time indexes
INFO 2019-10-08 18:50:29,381Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position
INFO 2019-10-08 18:50:29,394Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle
INFO 2019-10-08 18:50:29,400Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position
INFO 2019-10-08 18:50:29,406Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group NAL9602 parameter time_fix renaming to fix_time
INFO 2019-10-08 18:50:29,412Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude
INFO 2019-10-08 18:50:29,417Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude
INFO 2019-10-08 18:50:29,434Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle
INFO 2019-10-08 18:50:29,493Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate
INFO 2019-10-08 18:50:29,498Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources
INFO 2019-10-08 18:50:29,588Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-10-08 18:50:29,679Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-10-08 18:50:29,767Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources
WARNING 2019-10-08 18:50:29,767Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 'fix_residual_percent_distance_traveled' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T173757/201908261737_201908261805.nc4
WARNING 2019-10-08 18:50:29,768Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 'longitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T173757/201908261737_201908261805.nc4
WARNING 2019-10-08 18:50:29,768Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 'latitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T173757/201908261737_201908261805.nc4
WARNING 2019-10-08 18:50:29,768Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 'depth' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T173757/201908261737_201908261805.nc4
INFO 2019-10-08 18:50:29,772Z lrauvNc4ToNetcdf.py processResampleNc4File():1005 Variable platform_battery_charge empty so skipping
INFO 2019-10-08 18:50:29,776Z lrauvNc4ToNetcdf.py processResampleNc4File():1005 Variable platform_battery_voltage empty so skipping
WARNING 2019-10-08 18:50:29,776Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 'platform_average_current' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T173757/201908261737_201908261805.nc4
DEBUG 2019-10-08 18:50:29,877Z lrauvNc4ToNetcdf.py createNav():460 calling ts.resample() for pitch
DEBUG 2019-10-08 18:50:29,883Z lrauvNc4ToNetcdf.py createNav():462 calling self.interpolate() for pitch
INFO 2019-10-08 18:50:29,884Z lrauvNc4ToNetcdf.py createNav():472 platform_pitch_angle -> pitch: {'units': 'rad', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
DEBUG 2019-10-08 18:50:29,989Z lrauvNc4ToNetcdf.py createNav():460 calling ts.resample() for roll
DEBUG 2019-10-08 18:50:29,994Z lrauvNc4ToNetcdf.py createNav():462 calling self.interpolate() for roll
INFO 2019-10-08 18:50:29,995Z lrauvNc4ToNetcdf.py createNav():472 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
DEBUG 2019-10-08 18:50:30,102Z lrauvNc4ToNetcdf.py createNav():460 calling ts.resample() for yaw
DEBUG 2019-10-08 18:50:30,108Z lrauvNc4ToNetcdf.py createNav():462 calling self.interpolate() for yaw
INFO 2019-10-08 18:50:30,109Z lrauvNc4ToNetcdf.py createNav():472 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-10-08 18:50:30,110Z lrauvNc4ToNetcdf.py nudge_coords():592 /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T173757/201908261737_201908261805.nc4
DEBUG 2019-10-08 18:50:30,203Z lrauvNc4ToNetcdf.py var_series():580 longitude: rad_to_deg = True
DEBUG 2019-10-08 18:50:30,299Z lrauvNc4ToNetcdf.py var_series():580 latitude: rad_to_deg = True
DEBUG 2019-10-08 18:50:30,338Z lrauvNc4ToNetcdf.py var_series():580 longitude_fix: rad_to_deg = False
DEBUG 2019-10-08 18:50:30,376Z lrauvNc4ToNetcdf.py var_series():580 latitude_fix: rad_to_deg = False
INFO 2019-10-08 18:50:30,376Z lrauvNc4ToNetcdf.py nudge_coords():610 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s)
INFO 2019-10-08 18:50:30,378Z lrauvNc4ToNetcdf.py nudge_coords():626                  -            -            -        40    0.26              -              -
INFO 2019-10-08 18:50:30,380Z lrauvNc4ToNetcdf.py nudge_coords():648    0:        0.366   -0.0000017    0.0001001       235    1.58         -11.56          11.75
INFO 2019-10-08 18:50:30,386Z lrauvNc4ToNetcdf.py nudge_coords():648    1:        0.371   -0.0000107    0.0000353       110    0.73          -8.77           8.92
INFO 2019-10-08 18:50:30,393Z lrauvNc4ToNetcdf.py nudge_coords():648    2:        0.349   -0.0004436   -0.0001690      2795   18.82           1.64          -1.66
INFO 2019-10-08 18:50:30,399Z lrauvNc4ToNetcdf.py nudge_coords():678    4:            -            -            -       963    6.48              -              -
INFO 2019-10-08 18:50:30,399Z lrauvNc4ToNetcdf.py nudge_coords():682 Points in final series = 4103
DEBUG 2019-10-08 18:50:30,400Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():508 Constructing trackingdb url to 3600 seconds beyond time range of file
INFO 2019-10-08 18:50:30,417Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():516 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20190826T163757/20190826T190552/data.csv
INFO 2019-10-08 18:50:30,444Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():539 Found 0 position values from the Tracking database
INFO 2019-10-08 18:50:30,448Z lrauvNc4ToNetcdf.py processResampleNc4File():1095 ['control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time']
DEBUG 2019-10-08 18:50:30,448Z lrauvNc4ToNetcdf.py write_netcdf():120 Creating netCDF file /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T173757/201908261737_201908261805_2S_eng.nc
DEBUG 2019-10-08 18:50:30,454Z lrauvNc4ToNetcdf.py write_netcdf():144 Adding in record variable fix_time
DEBUG 2019-10-08 18:50:30,464Z lrauvNc4ToNetcdf.py write_netcdf():144 Adding in record variable time
DEBUG 2019-10-08 18:50:30,471Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_buoyancy_position
DEBUG 2019-10-08 18:50:30,478Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_elevator_angle
DEBUG 2019-10-08 18:50:30,485Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_mass_position
DEBUG 2019-10-08 18:50:30,491Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable fix_latitude
DEBUG 2019-10-08 18:50:30,497Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable fix_longitude
DEBUG 2019-10-08 18:50:30,504Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_rudder_angle
DEBUG 2019-10-08 18:50:30,511Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_propeller_rotation_rate
DEBUG 2019-10-08 18:50:30,522Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources
DEBUG 2019-10-08 18:50:30,528Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pose_longitude_DeadReckonUsingMultipleVelocitySources
DEBUG 2019-10-08 18:50:30,538Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pose_latitude_DeadReckonUsingMultipleVelocitySources
DEBUG 2019-10-08 18:50:30,546Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pose_depth_DeadReckonUsingMultipleVelocitySources
DEBUG 2019-10-08 18:50:30,553Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pitch
DEBUG 2019-10-08 18:50:30,559Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable roll
DEBUG 2019-10-08 18:50:30,565Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable yaw
DEBUG 2019-10-08 18:50:30,571Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable latitude
DEBUG 2019-10-08 18:50:30,578Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable longitude
DEBUG 2019-10-08 18:50:30,585Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable depth
DEBUG 2019-10-08 18:50:30,591Z lrauvNc4ToNetcdf.py write_netcdf():163 Adding in global metadata
INFO 2019-10-08 18:50:30,763Z lrauvNc4ToNetcdf.py processResampleNc4File():1098 Wrote /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T173757/201908261737_201908261805_2S_eng.nc