INFO 2019-10-08 18:50:38,591Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Reading /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T191930/201908261919_201908261959.nc4 file...
INFO 2019-10-08 18:50:38,591Z lrauvNc4ToNetcdf.py processResampleNc4File():960 After copying to /tmp/201908261919_201908261959.nc4
INFO 2019-10-08 18:50:40,162Z lrauvNc4ToNetcdf.py processResampleNc4File():962 Read file /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T191930/201908261919_201908261959.nc4
INFO 2019-10-08 18:50:42,288Z lrauvNc4ToNetcdf.py processResampleNc4File():967 Creating t variable of the time indexes
INFO 2019-10-08 18:50:42,306Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position
INFO 2019-10-08 18:50:42,323Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle
INFO 2019-10-08 18:50:42,328Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position
INFO 2019-10-08 18:50:42,334Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group NAL9602 parameter time_fix renaming to fix_time
INFO 2019-10-08 18:50:42,340Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude
INFO 2019-10-08 18:50:42,345Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude
INFO 2019-10-08 18:50:42,367Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle
INFO 2019-10-08 18:50:42,452Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate
INFO 2019-10-08 18:50:42,454Z lrauvNc4ToNetcdf.py processResampleNc4File():1005 Variable fix_residual_percent_distance_traveled empty so skipping
INFO 2019-10-08 18:50:42,573Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-10-08 18:50:42,693Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources
INFO 2019-10-08 18:50:42,815Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources
WARNING 2019-10-08 18:50:42,815Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 'fix_residual_percent_distance_traveled' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T191930/201908261919_201908261959.nc4
WARNING 2019-10-08 18:50:42,815Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 'longitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T191930/201908261919_201908261959.nc4
WARNING 2019-10-08 18:50:42,816Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 'latitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T191930/201908261919_201908261959.nc4
WARNING 2019-10-08 18:50:42,816Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 'depth' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T191930/201908261919_201908261959.nc4
INFO 2019-10-08 18:50:42,825Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge
INFO 2019-10-08 18:50:42,833Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage
WARNING 2019-10-08 18:50:42,833Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 'platform_average_current' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T191930/201908261919_201908261959.nc4
DEBUG 2019-10-08 18:50:42,968Z lrauvNc4ToNetcdf.py createNav():460 calling ts.resample() for pitch
DEBUG 2019-10-08 18:50:42,975Z lrauvNc4ToNetcdf.py createNav():462 calling self.interpolate() for pitch
INFO 2019-10-08 18:50:42,976Z lrauvNc4ToNetcdf.py createNav():472 platform_pitch_angle -> pitch: {'units': 'rad', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'}
DEBUG 2019-10-08 18:50:43,118Z lrauvNc4ToNetcdf.py createNav():460 calling ts.resample() for roll
DEBUG 2019-10-08 18:50:43,126Z lrauvNc4ToNetcdf.py createNav():462 calling self.interpolate() for roll
INFO 2019-10-08 18:50:43,127Z lrauvNc4ToNetcdf.py createNav():472 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'}
DEBUG 2019-10-08 18:50:43,267Z lrauvNc4ToNetcdf.py createNav():460 calling ts.resample() for yaw
DEBUG 2019-10-08 18:50:43,274Z lrauvNc4ToNetcdf.py createNav():462 calling self.interpolate() for yaw
INFO 2019-10-08 18:50:43,275Z lrauvNc4ToNetcdf.py createNav():472 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'}
INFO 2019-10-08 18:50:43,276Z lrauvNc4ToNetcdf.py nudge_coords():592 /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T191930/201908261919_201908261959.nc4
DEBUG 2019-10-08 18:50:43,391Z lrauvNc4ToNetcdf.py var_series():580 longitude: rad_to_deg = True
DEBUG 2019-10-08 18:50:43,508Z lrauvNc4ToNetcdf.py var_series():580 latitude: rad_to_deg = True
DEBUG 2019-10-08 18:50:43,565Z lrauvNc4ToNetcdf.py var_series():580 longitude_fix: rad_to_deg = False
DEBUG 2019-10-08 18:50:43,615Z lrauvNc4ToNetcdf.py var_series():580 latitude_fix: rad_to_deg = False
INFO 2019-10-08 18:50:43,615Z lrauvNc4ToNetcdf.py nudge_coords():610 seg#  end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s)
INFO 2019-10-08 18:50:43,618Z lrauvNc4ToNetcdf.py nudge_coords():626                  -            -            -       335    2.25              -              -
INFO 2019-10-08 18:50:43,620Z lrauvNc4ToNetcdf.py nudge_coords():648    0:        0.277    0.0003153    0.0002027       300    2.02         -18.33          18.59
INFO 2019-10-08 18:50:43,627Z lrauvNc4ToNetcdf.py nudge_coords():678    2:            -            -            -      5261   35.45              -              -
INFO 2019-10-08 18:50:43,627Z lrauvNc4ToNetcdf.py nudge_coords():682 Points in final series = 5896
DEBUG 2019-10-08 18:50:43,628Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():508 Constructing trackingdb url to 3600 seconds beyond time range of file
INFO 2019-10-08 18:50:43,647Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():516 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20190826T181931/20190826T205914/data.csv
INFO 2019-10-08 18:50:43,697Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():539 Found 0 position values from the Tracking database
INFO 2019-10-08 18:50:43,702Z lrauvNc4ToNetcdf.py processResampleNc4File():1095 ['control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_battery_charge', 'health_platform_average_voltage', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time']
DEBUG 2019-10-08 18:50:43,703Z lrauvNc4ToNetcdf.py write_netcdf():120 Creating netCDF file /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T191930/201908261919_201908261959_2S_eng.nc
DEBUG 2019-10-08 18:50:43,707Z lrauvNc4ToNetcdf.py write_netcdf():144 Adding in record variable fix_time
DEBUG 2019-10-08 18:50:43,719Z lrauvNc4ToNetcdf.py write_netcdf():144 Adding in record variable time
DEBUG 2019-10-08 18:50:43,730Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_buoyancy_position
DEBUG 2019-10-08 18:50:43,739Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_elevator_angle
DEBUG 2019-10-08 18:50:43,749Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_mass_position
DEBUG 2019-10-08 18:50:43,758Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable fix_latitude
DEBUG 2019-10-08 18:50:43,766Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable fix_longitude
DEBUG 2019-10-08 18:50:43,775Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_rudder_angle
DEBUG 2019-10-08 18:50:43,782Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_propeller_rotation_rate
DEBUG 2019-10-08 18:50:43,795Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pose_longitude_DeadReckonUsingMultipleVelocitySources
DEBUG 2019-10-08 18:50:43,804Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pose_latitude_DeadReckonUsingMultipleVelocitySources
DEBUG 2019-10-08 18:50:43,818Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pose_depth_DeadReckonUsingMultipleVelocitySources
DEBUG 2019-10-08 18:50:43,828Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable health_platform_battery_charge
DEBUG 2019-10-08 18:50:43,837Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable health_platform_average_voltage
DEBUG 2019-10-08 18:50:43,847Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pitch
DEBUG 2019-10-08 18:50:43,856Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable roll
DEBUG 2019-10-08 18:50:43,863Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable yaw
DEBUG 2019-10-08 18:50:43,873Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable latitude
DEBUG 2019-10-08 18:50:43,882Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable longitude
DEBUG 2019-10-08 18:50:43,891Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable depth
DEBUG 2019-10-08 18:50:43,900Z lrauvNc4ToNetcdf.py write_netcdf():163 Adding in global metadata
INFO 2019-10-08 18:50:44,120Z lrauvNc4ToNetcdf.py processResampleNc4File():1098 Wrote /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T191930/201908261919_201908261959_2S_eng.nc