INFO 2019-10-08 18:50:44,774Z lrauvNc4ToNetcdf.py processResampleNc4File():959 Reading /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T195916/201908261959_201908262353.nc4 file... INFO 2019-10-08 18:50:44,775Z lrauvNc4ToNetcdf.py processResampleNc4File():960 After copying to /tmp/201908261959_201908262353.nc4 INFO 2019-10-08 18:50:45,818Z lrauvNc4ToNetcdf.py processResampleNc4File():962 Read file /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T195916/201908261959_201908262353.nc4 INFO 2019-10-08 18:50:56,494Z lrauvNc4ToNetcdf.py processResampleNc4File():967 Creating t variable of the time indexes INFO 2019-10-08 18:50:56,562Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2019-10-08 18:50:56,639Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle INFO 2019-10-08 18:50:56,661Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2019-10-08 18:50:56,667Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2019-10-08 18:50:56,674Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2019-10-08 18:50:56,680Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2019-10-08 18:50:56,774Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2019-10-08 18:50:57,216Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate INFO 2019-10-08 18:50:57,222Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2019-10-08 18:50:57,888Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2019-10-08 18:50:58,559Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2019-10-08 18:50:59,225Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources WARNING 2019-10-08 18:50:59,225Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 'fix_residual_percent_distance_traveled' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T195916/201908261959_201908262353.nc4 WARNING 2019-10-08 18:50:59,226Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 'longitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T195916/201908261959_201908262353.nc4 WARNING 2019-10-08 18:50:59,226Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 'latitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T195916/201908261959_201908262353.nc4 WARNING 2019-10-08 18:50:59,226Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 'depth' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T195916/201908261959_201908262353.nc4 INFO 2019-10-08 18:50:59,237Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2019-10-08 18:50:59,246Z lrauvNc4ToNetcdf.py processResampleNc4File():1042 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage WARNING 2019-10-08 18:50:59,247Z lrauvNc4ToNetcdf.py processResampleNc4File():1044 'platform_average_current' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T195916/201908261959_201908262353.nc4 DEBUG 2019-10-08 18:50:59,908Z lrauvNc4ToNetcdf.py createNav():460 calling ts.resample() for pitch DEBUG 2019-10-08 18:50:59,928Z lrauvNc4ToNetcdf.py createNav():462 calling self.interpolate() for pitch INFO 2019-10-08 18:50:59,930Z lrauvNc4ToNetcdf.py createNav():472 platform_pitch_angle -> pitch: {'units': 'rad', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} DEBUG 2019-10-08 18:51:00,583Z lrauvNc4ToNetcdf.py createNav():460 calling ts.resample() for roll DEBUG 2019-10-08 18:51:00,602Z lrauvNc4ToNetcdf.py createNav():462 calling self.interpolate() for roll INFO 2019-10-08 18:51:00,603Z lrauvNc4ToNetcdf.py createNav():472 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} DEBUG 2019-10-08 18:51:01,254Z lrauvNc4ToNetcdf.py createNav():460 calling ts.resample() for yaw DEBUG 2019-10-08 18:51:01,275Z lrauvNc4ToNetcdf.py createNav():462 calling self.interpolate() for yaw INFO 2019-10-08 18:51:01,276Z lrauvNc4ToNetcdf.py createNav():472 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-10-08 18:51:01,277Z lrauvNc4ToNetcdf.py nudge_coords():592 /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T195916/201908261959_201908262353.nc4 DEBUG 2019-10-08 18:51:01,751Z lrauvNc4ToNetcdf.py var_series():580 longitude: rad_to_deg = True DEBUG 2019-10-08 18:51:02,209Z lrauvNc4ToNetcdf.py var_series():580 latitude: rad_to_deg = True DEBUG 2019-10-08 18:51:02,256Z lrauvNc4ToNetcdf.py var_series():580 longitude_fix: rad_to_deg = False DEBUG 2019-10-08 18:51:02,299Z lrauvNc4ToNetcdf.py var_series():580 latitude_fix: rad_to_deg = False INFO 2019-10-08 18:51:02,299Z lrauvNc4ToNetcdf.py nudge_coords():610 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) INFO 2019-10-08 18:51:02,301Z lrauvNc4ToNetcdf.py nudge_coords():626 - - - 0 0.00 - - INFO 2019-10-08 18:51:02,306Z lrauvNc4ToNetcdf.py nudge_coords():648 0: 0.387 0.0011572 0.0003212 800 5.44 -10.80 10.95 INFO 2019-10-08 18:51:02,313Z lrauvNc4ToNetcdf.py nudge_coords():648 1: 0.330 0.0006587 0.0001992 439 2.97 -12.25 12.41 INFO 2019-10-08 18:51:02,319Z lrauvNc4ToNetcdf.py nudge_coords():648 2: 0.361 0.0001038 0.0000338 56 0.44 -14.13 14.32 INFO 2019-10-08 18:51:02,325Z lrauvNc4ToNetcdf.py nudge_coords():648 3: 0.347 0.0000523 0.0000110 39 0.26 -7.85 7.95 INFO 2019-10-08 18:51:02,331Z lrauvNc4ToNetcdf.py nudge_coords():648 4: 0.362 0.0011960 0.0003455 783 5.29 -11.94 12.10 INFO 2019-10-08 18:51:02,337Z lrauvNc4ToNetcdf.py nudge_coords():648 5: 0.360 0.0003156 0.0000617 192 1.29 -8.77 8.89 INFO 2019-10-08 18:51:02,343Z lrauvNc4ToNetcdf.py nudge_coords():648 6: 0.333 0.0006013 0.0001497 376 2.54 -10.77 10.92 INFO 2019-10-08 18:51:02,350Z lrauvNc4ToNetcdf.py nudge_coords():648 7: 0.359 0.0010022 -0.0001928 3165 21.31 1.65 -1.68 INFO 2019-10-08 18:51:02,356Z lrauvNc4ToNetcdf.py nudge_coords():648 8: 0.345 0.0005342 -0.0000353 527 3.59 1.80 -1.82 INFO 2019-10-08 18:51:02,362Z lrauvNc4ToNetcdf.py nudge_coords():648 9: 0.340 0.0005200 -0.0005880 3125 21.05 5.11 -5.18 INFO 2019-10-08 18:51:02,369Z lrauvNc4ToNetcdf.py nudge_coords():648 10: 0.380 0.0003000 -0.0002837 507 3.44 15.07 -15.27 INFO 2019-10-08 18:51:02,375Z lrauvNc4ToNetcdf.py nudge_coords():648 11: 0.337 0.0009389 -0.0001999 3475 23.40 1.56 -1.58 INFO 2019-10-08 18:51:02,381Z lrauvNc4ToNetcdf.py nudge_coords():648 12: 0.374 0.0000820 0.0000187 77 0.54 -6.37 6.46 INFO 2019-10-08 18:51:02,387Z lrauvNc4ToNetcdf.py nudge_coords():648 13: 0.341 0.0001797 -0.0005187 3327 22.43 4.23 -4.29 INFO 2019-10-08 18:51:02,394Z lrauvNc4ToNetcdf.py nudge_coords():648 14: 0.316 0.0003037 -0.0000260 361 3.13 1.52 -1.54 INFO 2019-10-08 18:51:02,400Z lrauvNc4ToNetcdf.py nudge_coords():648 15: 0.362 0.0004247 -0.0003709 3822 25.76 2.64 -2.67 INFO 2019-10-08 18:51:02,407Z lrauvNc4ToNetcdf.py nudge_coords():648 16: 0.340 0.0004208 -0.0000326 551 3.72 1.60 -1.62 INFO 2019-10-08 18:51:02,413Z lrauvNc4ToNetcdf.py nudge_coords():648 17: 0.342 0.0000535 -0.0000033 33 0.39 1.56 -1.58 INFO 2019-10-08 18:51:02,419Z lrauvNc4ToNetcdf.py nudge_coords():648 18: 0.337 0.0003526 -0.0005338 3182 21.43 4.56 -4.61 INFO 2019-10-08 18:51:02,426Z lrauvNc4ToNetcdf.py nudge_coords():648 19: 0.378 0.0002842 -0.0000898 496 3.38 4.87 -4.93 INFO 2019-10-08 18:51:02,432Z lrauvNc4ToNetcdf.py nudge_coords():648 20: 0.308 0.0497157 0.0034597 3656 24.64 -25.72 26.01 INFO 2019-10-08 18:51:02,438Z lrauvNc4ToNetcdf.py nudge_coords():648 21: 0.328 0.0007615 -0.0000195 437 3.12 1.14 -1.16 INFO 2019-10-08 18:51:02,445Z lrauvNc4ToNetcdf.py nudge_coords():648 22: 0.340 -0.0000118 0.0002845 99 0.66 -78.93 79.82 INFO 2019-10-08 18:51:02,451Z lrauvNc4ToNetcdf.py nudge_coords():648 23: 0.358 -0.0000013 0.0000332 6 0.03 -180.85 182.89 INFO 2019-10-08 18:51:02,457Z lrauvNc4ToNetcdf.py nudge_coords():648 24: 0.381 0.0002520 0.0000320 186 1.25 -4.71 4.76 INFO 2019-10-08 18:51:02,463Z lrauvNc4ToNetcdf.py nudge_coords():648 25: 0.373 0.0000815 0.0000180 54 0.36 -9.25 9.35 INFO 2019-10-08 18:51:02,469Z lrauvNc4ToNetcdf.py nudge_coords():648 26: 0.284 0.0000092 -0.0000062 8 0.05 23.25 -23.51 INFO 2019-10-08 18:51:02,475Z lrauvNc4ToNetcdf.py nudge_coords():648 27: 0.357 0.0000143 -0.0000035 7 0.04 16.08 -16.26 INFO 2019-10-08 18:51:02,481Z lrauvNc4ToNetcdf.py nudge_coords():648 28: 0.347 0.0000152 -0.0000230 7 0.04 104.27 -105.45 INFO 2019-10-08 18:51:02,487Z lrauvNc4ToNetcdf.py nudge_coords():648 29: 0.362 0.0000077 -0.0000038 8 0.05 14.88 -15.05 INFO 2019-10-08 18:51:02,493Z lrauvNc4ToNetcdf.py nudge_coords():648 30: 0.332 0.0000062 0.0000125 7 0.04 -55.61 56.24 INFO 2019-10-08 18:51:02,499Z lrauvNc4ToNetcdf.py nudge_coords():648 31: 0.361 0.0000030 -0.0000005 8 0.05 2.03 -2.05 INFO 2019-10-08 18:51:02,505Z lrauvNc4ToNetcdf.py nudge_coords():648 32: 0.352 0.0000080 0.0000018 7 0.04 -8.28 8.38 INFO 2019-10-08 18:51:02,511Z lrauvNc4ToNetcdf.py nudge_coords():648 33: 0.361 0.0000838 0.0001670 94 0.63 -48.85 49.40 INFO 2019-10-08 18:51:02,517Z lrauvNc4ToNetcdf.py nudge_coords():678 35: - - - 3515 24.81 - - INFO 2019-10-08 18:51:02,518Z lrauvNc4ToNetcdf.py nudge_coords():682 Points in final series = 33432 DEBUG 2019-10-08 18:51:02,518Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():508 Constructing trackingdb url to 3600 seconds beyond time range of file INFO 2019-10-08 18:51:02,539Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():516 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20190826T185927/20190827T005345/data.csv INFO 2019-10-08 18:51:02,572Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():539 Found 0 position values from the Tracking database INFO 2019-10-08 18:51:02,577Z lrauvNc4ToNetcdf.py processResampleNc4File():1095 ['control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_battery_charge', 'health_platform_average_voltage', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] DEBUG 2019-10-08 18:51:02,578Z lrauvNc4ToNetcdf.py write_netcdf():120 Creating netCDF file /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T195916/201908261959_201908262353_2S_eng.nc DEBUG 2019-10-08 18:51:02,583Z lrauvNc4ToNetcdf.py write_netcdf():144 Adding in record variable fix_time DEBUG 2019-10-08 18:51:02,603Z lrauvNc4ToNetcdf.py write_netcdf():144 Adding in record variable time DEBUG 2019-10-08 18:51:02,613Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_buoyancy_position DEBUG 2019-10-08 18:51:02,623Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_elevator_angle DEBUG 2019-10-08 18:51:02,632Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_mass_position DEBUG 2019-10-08 18:51:02,641Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable fix_latitude DEBUG 2019-10-08 18:51:02,650Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable fix_longitude DEBUG 2019-10-08 18:51:02,660Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_rudder_angle DEBUG 2019-10-08 18:51:02,670Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_propeller_rotation_rate DEBUG 2019-10-08 18:51:02,689Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources DEBUG 2019-10-08 18:51:02,699Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pose_longitude_DeadReckonUsingMultipleVelocitySources DEBUG 2019-10-08 18:51:02,715Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pose_latitude_DeadReckonUsingMultipleVelocitySources DEBUG 2019-10-08 18:51:02,725Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pose_depth_DeadReckonUsingMultipleVelocitySources DEBUG 2019-10-08 18:51:02,735Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable health_platform_battery_charge DEBUG 2019-10-08 18:51:02,744Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable health_platform_average_voltage DEBUG 2019-10-08 18:51:02,753Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pitch DEBUG 2019-10-08 18:51:02,762Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable roll DEBUG 2019-10-08 18:51:02,772Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable yaw DEBUG 2019-10-08 18:51:02,781Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable latitude DEBUG 2019-10-08 18:51:02,791Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable longitude DEBUG 2019-10-08 18:51:02,801Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable depth DEBUG 2019-10-08 18:51:02,810Z lrauvNc4ToNetcdf.py write_netcdf():163 Adding in global metadata INFO 2019-10-08 18:51:03,056Z lrauvNc4ToNetcdf.py processResampleNc4File():1098 Wrote /mbari/LRAUV/whoidhs/missionlogs/2019/20190824_20190830/20190826T195916/201908261959_201908262353_2S_eng.nc