INFO 2019-12-06 02:10:21,358Z lrauvNc4ToNetcdf.py processResampleNc4File():979 Reading /mbari/LRAUV/whoidhs/missionlogs/2019/20191113_20191114/20191113T182913/201911131829_201911131901.nc4 file... INFO 2019-12-06 02:10:21,359Z lrauvNc4ToNetcdf.py processResampleNc4File():980 After copying to /tmp/201911131829_201911131901.nc4 INFO 2019-12-06 02:10:25,687Z lrauvNc4ToNetcdf.py processResampleNc4File():982 Read file /mbari/LRAUV/whoidhs/missionlogs/2019/20191113_20191114/20191113T182913/201911131829_201911131901.nc4 INFO 2019-12-06 02:10:25,703Z lrauvNc4ToNetcdf.py createSeries():225 latitude: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-12-06 02:10:25,709Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:04 2019'] INFO 2019-12-06 02:10:25,715Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable latitude INFO 2019-12-06 02:10:25,790Z lrauvNc4ToNetcdf.py createSeries():225 longitude: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-12-06 02:10:25,795Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:04 2019'] INFO 2019-12-06 02:10:25,801Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable longitude INFO 2019-12-06 02:10:25,876Z lrauvNc4ToNetcdf.py createSeries():225 depth: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-12-06 02:10:25,881Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019'] INFO 2019-12-06 02:10:25,886Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable depth INFO 2019-12-06 02:10:25,960Z lrauvNc4ToNetcdf.py createSeries():225 time: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-12-06 02:10:25,965Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019'] INFO 2019-12-06 02:10:25,970Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable time INFO 2019-12-06 02:10:26,051Z lrauvNc4ToNetcdf.py createSeries():225 latitude: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-12-06 02:10:26,056Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:04 2019'] INFO 2019-12-06 02:10:26,062Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable latitude INFO 2019-12-06 02:10:26,135Z lrauvNc4ToNetcdf.py createSeries():225 longitude: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-12-06 02:10:26,140Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:04 2019'] INFO 2019-12-06 02:10:26,145Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable longitude INFO 2019-12-06 02:10:26,219Z lrauvNc4ToNetcdf.py createSeries():225 depth: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-12-06 02:10:26,224Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019'] INFO 2019-12-06 02:10:26,230Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable depth INFO 2019-12-06 02:10:26,303Z lrauvNc4ToNetcdf.py createSeries():225 time: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-12-06 02:10:26,308Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019'] INFO 2019-12-06 02:10:26,314Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable time INFO 2019-12-06 02:10:26,388Z lrauvNc4ToNetcdf.py createSeries():225 latitude: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-12-06 02:10:26,393Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:04 2019'] INFO 2019-12-06 02:10:26,398Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable latitude INFO 2019-12-06 02:10:26,472Z lrauvNc4ToNetcdf.py createSeries():225 longitude: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-12-06 02:10:26,477Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:04 2019'] INFO 2019-12-06 02:10:26,482Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable longitude INFO 2019-12-06 02:10:26,562Z lrauvNc4ToNetcdf.py createSeries():225 depth: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-12-06 02:10:26,568Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019'] INFO 2019-12-06 02:10:26,573Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable depth INFO 2019-12-06 02:10:26,647Z lrauvNc4ToNetcdf.py createSeries():225 time: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-12-06 02:10:26,653Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019'] INFO 2019-12-06 02:10:26,658Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable time INFO 2019-12-06 02:10:26,732Z lrauvNc4ToNetcdf.py createSeries():225 latitude: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-12-06 02:10:26,737Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:04 2019'] INFO 2019-12-06 02:10:26,742Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable latitude INFO 2019-12-06 02:10:26,817Z lrauvNc4ToNetcdf.py createSeries():225 longitude: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-12-06 02:10:26,822Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:04 2019'] INFO 2019-12-06 02:10:26,828Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable longitude INFO 2019-12-06 02:10:26,902Z lrauvNc4ToNetcdf.py createSeries():225 depth: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-12-06 02:10:26,908Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019'] INFO 2019-12-06 02:10:26,913Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable depth INFO 2019-12-06 02:10:26,987Z lrauvNc4ToNetcdf.py createSeries():225 time: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-12-06 02:10:26,992Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019'] INFO 2019-12-06 02:10:26,997Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable time INFO 2019-12-06 02:10:27,061Z lrauvNc4ToNetcdf.py processResampleNc4File():987 Creating t variable of the time indexes WARNING 2019-12-06 02:10:27,066Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191113_20191114/20191113T182913/201911131829_201911131901.nc4 INFO 2019-12-06 02:10:27,083Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2019-12-06 02:10:27,085Z lrauvNc4ToNetcdf.py processResampleNc4File():1025 Variable sea_water_salinity empty so skipping INFO 2019-12-06 02:10:27,088Z lrauvNc4ToNetcdf.py processResampleNc4File():1025 Variable sea_water_temperature empty so skipping WARNING 2019-12-06 02:10:27,088Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191113_20191114/20191113T182913/201911131829_201911131901.nc4 WARNING 2019-12-06 02:10:27,088Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191113_20191114/20191113T182913/201911131829_201911131901.nc4 INFO 2019-12-06 02:10:27,102Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle WARNING 2019-12-06 02:10:27,102Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191113_20191114/20191113T182913/201911131829_201911131901.nc4 INFO 2019-12-06 02:10:27,112Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2019-12-06 02:10:27,118Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2019-12-06 02:10:27,124Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2019-12-06 02:10:27,130Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2019-12-06 02:10:27,132Z lrauvNc4ToNetcdf.py createSeries():225 downwelling_photosynthetic_photon_flux_in_sea_water: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-12-06 02:10:27,132Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019'] INFO 2019-12-06 02:10:27,133Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable downwelling_photosynthetic_photon_flux_in_sea_water INFO 2019-12-06 02:10:27,194Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2019-12-06 02:10:27,230Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2019-12-06 02:10:27,302Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate WARNING 2019-12-06 02:10:27,302Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'mass_concentration_of_chlorophyll_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191113_20191114/20191113T182913/201911131829_201911131901.nc4 WARNING 2019-12-06 02:10:27,303Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'Output470' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191113_20191114/20191113T182913/201911131829_201911131901.nc4 WARNING 2019-12-06 02:10:27,303Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'Output650' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191113_20191114/20191113T182913/201911131829_201911131901.nc4 INFO 2019-12-06 02:10:27,306Z lrauvNc4ToNetcdf.py processResampleNc4File():1025 Variable concentration_of_chromophoric_dissolved_organic_matter_in_sea_water empty so skipping INFO 2019-12-06 02:10:27,308Z lrauvNc4ToNetcdf.py processResampleNc4File():1025 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2019-12-06 02:10:27,311Z lrauvNc4ToNetcdf.py processResampleNc4File():1025 Variable BackscatteringCoeff700nm empty so skipping INFO 2019-12-06 02:10:27,313Z lrauvNc4ToNetcdf.py processResampleNc4File():1025 Variable VolumeScatCoeff117deg700nm empty so skipping INFO 2019-12-06 02:10:27,316Z lrauvNc4ToNetcdf.py processResampleNc4File():1025 Variable mass_concentration_of_petroleum_hydrocarbons_in_sea_water empty so skipping INFO 2019-12-06 02:10:27,321Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2019-12-06 02:10:27,323Z lrauvNc4ToNetcdf.py createSeries():225 longitude: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-12-06 02:10:27,324Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:04 2019'] INFO 2019-12-06 02:10:27,325Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable longitude INFO 2019-12-06 02:10:27,386Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2019-12-06 02:10:27,388Z lrauvNc4ToNetcdf.py createSeries():225 latitude: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-12-06 02:10:27,389Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:04 2019'] INFO 2019-12-06 02:10:27,389Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable latitude INFO 2019-12-06 02:10:27,450Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2019-12-06 02:10:27,452Z lrauvNc4ToNetcdf.py createSeries():225 depth: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-12-06 02:10:27,453Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:04 2019'] INFO 2019-12-06 02:10:27,454Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable depth INFO 2019-12-06 02:10:27,515Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources WARNING 2019-12-06 02:10:27,515Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'fix_residual_percent_distance_traveled' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191113_20191114/20191113T182913/201911131829_201911131901.nc4 WARNING 2019-12-06 02:10:27,515Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'longitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191113_20191114/20191113T182913/201911131829_201911131901.nc4 WARNING 2019-12-06 02:10:27,516Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'latitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191113_20191114/20191113T182913/201911131829_201911131901.nc4 WARNING 2019-12-06 02:10:27,516Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'depth' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191113_20191114/20191113T182913/201911131829_201911131901.nc4 INFO 2019-12-06 02:10:27,521Z lrauvNc4ToNetcdf.py processResampleNc4File():1025 Variable platform_battery_charge empty so skipping INFO 2019-12-06 02:10:27,525Z lrauvNc4ToNetcdf.py processResampleNc4File():1025 Variable platform_battery_voltage empty so skipping WARNING 2019-12-06 02:10:27,525Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'platform_average_current' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191113_20191114/20191113T182913/201911131829_201911131901.nc4 INFO 2019-12-06 02:10:27,540Z lrauvNc4ToNetcdf.py createSeries():225 platform_pitch_angle: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4570 4571 4572 4573 4574 4575 4576 4577 4578 4579] INFO 2019-12-06 02:10:27,545Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019'] INFO 2019-12-06 02:10:27,551Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable platform_pitch_angle DEBUG 2019-12-06 02:10:27,613Z lrauvNc4ToNetcdf.py createNav():477 calling ts.resample() for pitch DEBUG 2019-12-06 02:10:27,616Z lrauvNc4ToNetcdf.py createNav():479 calling self.interpolate() for pitch INFO 2019-12-06 02:10:27,617Z lrauvNc4ToNetcdf.py createNav():489 platform_pitch_angle -> pitch: {'units': 'rad', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-12-06 02:10:27,630Z lrauvNc4ToNetcdf.py createSeries():225 platform_roll_angle: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4570 4571 4572 4573 4574 4575 4576 4577 4578 4579] INFO 2019-12-06 02:10:27,635Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019'] INFO 2019-12-06 02:10:27,641Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable platform_roll_angle DEBUG 2019-12-06 02:10:27,703Z lrauvNc4ToNetcdf.py createNav():477 calling ts.resample() for roll DEBUG 2019-12-06 02:10:27,707Z lrauvNc4ToNetcdf.py createNav():479 calling self.interpolate() for roll INFO 2019-12-06 02:10:27,708Z lrauvNc4ToNetcdf.py createNav():489 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-12-06 02:10:27,720Z lrauvNc4ToNetcdf.py createSeries():225 platform_orientation: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4570 4571 4572 4573 4574 4575 4576 4577 4578 4579] INFO 2019-12-06 02:10:27,725Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019'] INFO 2019-12-06 02:10:27,731Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable platform_orientation DEBUG 2019-12-06 02:10:27,794Z lrauvNc4ToNetcdf.py createNav():477 calling ts.resample() for yaw DEBUG 2019-12-06 02:10:27,797Z lrauvNc4ToNetcdf.py createNav():479 calling self.interpolate() for yaw INFO 2019-12-06 02:10:27,798Z lrauvNc4ToNetcdf.py createNav():489 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-12-06 02:10:27,799Z lrauvNc4ToNetcdf.py nudge_coords():609 /mbari/LRAUV/whoidhs/missionlogs/2019/20191113_20191114/20191113T182913/201911131829_201911131901.nc4 DEBUG 2019-12-06 02:10:27,880Z lrauvNc4ToNetcdf.py var_series():597 longitude: rad_to_deg = True DEBUG 2019-12-06 02:10:27,960Z lrauvNc4ToNetcdf.py var_series():597 latitude: rad_to_deg = True DEBUG 2019-12-06 02:10:27,986Z lrauvNc4ToNetcdf.py var_series():597 longitude_fix: rad_to_deg = False DEBUG 2019-12-06 02:10:28,011Z lrauvNc4ToNetcdf.py var_series():597 latitude_fix: rad_to_deg = False INFO 2019-12-06 02:10:28,012Z lrauvNc4ToNetcdf.py nudge_coords():627 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2019-12-06 02:10:28,014Z lrauvNc4ToNetcdf.py nudge_coords():643 - - - 3593 24.19 - - - INFO 2019-12-06 02:10:28,016Z lrauvNc4ToNetcdf.py nudge_coords():665 0: 0.345 -0.0000506 0.0004760 1039 6.99 7.96 12.62 2019-11-13 19:00:24.849340916 INFO 2019-12-06 02:10:28,023Z lrauvNc4ToNetcdf.py nudge_coords():695 2: - - - 97 0.65 - - INFO 2019-12-06 02:10:28,023Z lrauvNc4ToNetcdf.py nudge_coords():699 Points in final series = 4729 DEBUG 2019-12-06 02:10:28,024Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():525 Constructing trackingdb url to 3600 seconds beyond time range of file INFO 2019-12-06 02:10:28,035Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():533 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20191113T172913/20191113T200103/data.csv INFO 2019-12-06 02:10:28,054Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():556 Found 0 position values from the Tracking database INFO 2019-12-06 02:10:28,058Z lrauvNc4ToNetcdf.py processResampleNc4File():1120 ['control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'fix_time', 'fix_latitude', 'fix_longitude', 'PAR', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] DEBUG 2019-12-06 02:10:28,059Z lrauvNc4ToNetcdf.py write_netcdf():120 Creating netCDF file /mbari/LRAUV/whoidhs/missionlogs/2019/20191113_20191114/20191113T182913/201911131829_201911131901_2S_scieng.nc DEBUG 2019-12-06 02:10:28,071Z lrauvNc4ToNetcdf.py write_netcdf():144 Adding in record variable fix_time DEBUG 2019-12-06 02:10:28,077Z lrauvNc4ToNetcdf.py write_netcdf():144 Adding in record variable time DEBUG 2019-12-06 02:10:28,078Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_buoyancy_position DEBUG 2019-12-06 02:10:28,080Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_elevator_angle DEBUG 2019-12-06 02:10:28,081Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_mass_position DEBUG 2019-12-06 02:10:28,082Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable fix_latitude DEBUG 2019-12-06 02:10:28,084Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable fix_longitude DEBUG 2019-12-06 02:10:28,085Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable PAR DEBUG 2019-12-06 02:10:28,086Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_rudder_angle DEBUG 2019-12-06 02:10:28,092Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_propeller_rotation_rate DEBUG 2019-12-06 02:10:28,094Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources DEBUG 2019-12-06 02:10:28,096Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pose_longitude_DeadReckonUsingMultipleVelocitySources DEBUG 2019-12-06 02:10:28,102Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pose_latitude_DeadReckonUsingMultipleVelocitySources DEBUG 2019-12-06 02:10:28,104Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pose_depth_DeadReckonUsingMultipleVelocitySources DEBUG 2019-12-06 02:10:28,105Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pitch DEBUG 2019-12-06 02:10:28,107Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable roll DEBUG 2019-12-06 02:10:28,108Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable yaw DEBUG 2019-12-06 02:10:28,109Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable latitude DEBUG 2019-12-06 02:10:28,111Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable longitude DEBUG 2019-12-06 02:10:28,113Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable depth DEBUG 2019-12-06 02:10:28,114Z lrauvNc4ToNetcdf.py write_netcdf():163 Adding in global metadata INFO 2019-12-06 02:10:28,247Z lrauvNc4ToNetcdf.py processResampleNc4File():1123 Wrote /mbari/LRAUV/whoidhs/missionlogs/2019/20191113_20191114/20191113T182913/201911131829_201911131901_2S_scieng.nc