INFO 2019-11-15 02:27:05,646Z lrauvNc4ToNetcdf.py processResampleNc4File():979 Reading /mbari/LRAUV/whoidhs/missionlogs/2019/20191113_20191114/20191113T182913/201911131829_201911131901.nc4 file... INFO 2019-11-15 02:27:05,646Z lrauvNc4ToNetcdf.py processResampleNc4File():980 After copying to /tmp/201911131829_201911131901.nc4 INFO 2019-11-15 02:27:06,592Z lrauvNc4ToNetcdf.py processResampleNc4File():982 Read file /mbari/LRAUV/whoidhs/missionlogs/2019/20191113_20191114/20191113T182913/201911131829_201911131901.nc4 INFO 2019-11-15 02:27:06,611Z lrauvNc4ToNetcdf.py createSeries():225 latitude: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-11-15 02:27:06,618Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:04 2019'] INFO 2019-11-15 02:27:06,625Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable latitude INFO 2019-11-15 02:27:06,705Z lrauvNc4ToNetcdf.py createSeries():225 longitude: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-11-15 02:27:06,711Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:04 2019'] INFO 2019-11-15 02:27:06,718Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable longitude INFO 2019-11-15 02:27:06,796Z lrauvNc4ToNetcdf.py createSeries():225 depth: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-11-15 02:27:06,803Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019'] INFO 2019-11-15 02:27:06,809Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable depth INFO 2019-11-15 02:27:06,888Z lrauvNc4ToNetcdf.py createSeries():225 time: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-11-15 02:27:06,894Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019'] INFO 2019-11-15 02:27:06,901Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable time INFO 2019-11-15 02:27:06,981Z lrauvNc4ToNetcdf.py createSeries():225 latitude: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-11-15 02:27:06,988Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:04 2019'] INFO 2019-11-15 02:27:06,995Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable latitude INFO 2019-11-15 02:27:07,073Z lrauvNc4ToNetcdf.py createSeries():225 longitude: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-11-15 02:27:07,080Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:04 2019'] INFO 2019-11-15 02:27:07,086Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable longitude INFO 2019-11-15 02:27:07,164Z lrauvNc4ToNetcdf.py createSeries():225 depth: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-11-15 02:27:07,171Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019'] INFO 2019-11-15 02:27:07,177Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable depth INFO 2019-11-15 02:27:07,255Z lrauvNc4ToNetcdf.py createSeries():225 time: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-11-15 02:27:07,261Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019'] INFO 2019-11-15 02:27:07,268Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable time INFO 2019-11-15 02:27:07,345Z lrauvNc4ToNetcdf.py createSeries():225 latitude: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-11-15 02:27:07,352Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:04 2019'] INFO 2019-11-15 02:27:07,359Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable latitude INFO 2019-11-15 02:27:07,436Z lrauvNc4ToNetcdf.py createSeries():225 longitude: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-11-15 02:27:07,443Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:04 2019'] INFO 2019-11-15 02:27:07,449Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable longitude INFO 2019-11-15 02:27:07,527Z lrauvNc4ToNetcdf.py createSeries():225 depth: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-11-15 02:27:07,533Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019'] INFO 2019-11-15 02:27:07,540Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable depth INFO 2019-11-15 02:27:07,618Z lrauvNc4ToNetcdf.py createSeries():225 time: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-11-15 02:27:07,624Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019'] INFO 2019-11-15 02:27:07,631Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable time INFO 2019-11-15 02:27:07,708Z lrauvNc4ToNetcdf.py createSeries():225 latitude: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-11-15 02:27:07,715Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:04 2019'] INFO 2019-11-15 02:27:07,721Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable latitude INFO 2019-11-15 02:27:07,799Z lrauvNc4ToNetcdf.py createSeries():225 longitude: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-11-15 02:27:07,806Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:04 2019'] INFO 2019-11-15 02:27:07,812Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable longitude INFO 2019-11-15 02:27:07,890Z lrauvNc4ToNetcdf.py createSeries():225 depth: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-11-15 02:27:07,897Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019'] INFO 2019-11-15 02:27:07,903Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable depth INFO 2019-11-15 02:27:07,983Z lrauvNc4ToNetcdf.py createSeries():225 time: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-11-15 02:27:07,990Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019'] INFO 2019-11-15 02:27:07,996Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable time INFO 2019-11-15 02:27:08,062Z lrauvNc4ToNetcdf.py processResampleNc4File():987 Creating t variable of the time indexes WARNING 2019-11-15 02:27:08,068Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191113_20191114/20191113T182913/201911131829_201911131901.nc4 INFO 2019-11-15 02:27:08,085Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2019-11-15 02:27:08,088Z lrauvNc4ToNetcdf.py processResampleNc4File():1025 Variable sea_water_salinity empty so skipping INFO 2019-11-15 02:27:08,090Z lrauvNc4ToNetcdf.py processResampleNc4File():1025 Variable sea_water_temperature empty so skipping WARNING 2019-11-15 02:27:08,091Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191113_20191114/20191113T182913/201911131829_201911131901.nc4 WARNING 2019-11-15 02:27:08,091Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191113_20191114/20191113T182913/201911131829_201911131901.nc4 INFO 2019-11-15 02:27:08,105Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle WARNING 2019-11-15 02:27:08,105Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191113_20191114/20191113T182913/201911131829_201911131901.nc4 INFO 2019-11-15 02:27:08,115Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2019-11-15 02:27:08,121Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2019-11-15 02:27:08,127Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2019-11-15 02:27:08,133Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2019-11-15 02:27:08,135Z lrauvNc4ToNetcdf.py createSeries():225 downwelling_photosynthetic_photon_flux_in_sea_water: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-11-15 02:27:08,136Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019'] INFO 2019-11-15 02:27:08,136Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable downwelling_photosynthetic_photon_flux_in_sea_water INFO 2019-11-15 02:27:08,198Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2019-11-15 02:27:08,234Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2019-11-15 02:27:08,308Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate WARNING 2019-11-15 02:27:08,309Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'mass_concentration_of_chlorophyll_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191113_20191114/20191113T182913/201911131829_201911131901.nc4 WARNING 2019-11-15 02:27:08,309Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'Output470' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191113_20191114/20191113T182913/201911131829_201911131901.nc4 WARNING 2019-11-15 02:27:08,309Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'Output650' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191113_20191114/20191113T182913/201911131829_201911131901.nc4 INFO 2019-11-15 02:27:08,312Z lrauvNc4ToNetcdf.py processResampleNc4File():1025 Variable concentration_of_chromophoric_dissolved_organic_matter_in_sea_water empty so skipping INFO 2019-11-15 02:27:08,314Z lrauvNc4ToNetcdf.py processResampleNc4File():1025 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2019-11-15 02:27:08,317Z lrauvNc4ToNetcdf.py processResampleNc4File():1025 Variable BackscatteringCoeff700nm empty so skipping INFO 2019-11-15 02:27:08,320Z lrauvNc4ToNetcdf.py processResampleNc4File():1025 Variable VolumeScatCoeff117deg700nm empty so skipping INFO 2019-11-15 02:27:08,322Z lrauvNc4ToNetcdf.py processResampleNc4File():1025 Variable mass_concentration_of_petroleum_hydrocarbons_in_sea_water empty so skipping INFO 2019-11-15 02:27:08,328Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2019-11-15 02:27:08,330Z lrauvNc4ToNetcdf.py createSeries():225 longitude: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-11-15 02:27:08,330Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:04 2019'] INFO 2019-11-15 02:27:08,331Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable longitude INFO 2019-11-15 02:27:08,392Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2019-11-15 02:27:08,394Z lrauvNc4ToNetcdf.py createSeries():225 latitude: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-11-15 02:27:08,394Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:04 2019'] INFO 2019-11-15 02:27:08,395Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable latitude INFO 2019-11-15 02:27:08,456Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2019-11-15 02:27:08,458Z lrauvNc4ToNetcdf.py createSeries():225 depth: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4719 4720 4721 4722 4723 4724 4725 4726 4727 4728] INFO 2019-11-15 02:27:08,458Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:04 2019'] INFO 2019-11-15 02:27:08,459Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable depth INFO 2019-11-15 02:27:08,520Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources WARNING 2019-11-15 02:27:08,520Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'fix_residual_percent_distance_traveled' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191113_20191114/20191113T182913/201911131829_201911131901.nc4 WARNING 2019-11-15 02:27:08,521Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'longitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191113_20191114/20191113T182913/201911131829_201911131901.nc4 WARNING 2019-11-15 02:27:08,521Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'latitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191113_20191114/20191113T182913/201911131829_201911131901.nc4 WARNING 2019-11-15 02:27:08,521Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'depth' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191113_20191114/20191113T182913/201911131829_201911131901.nc4 INFO 2019-11-15 02:27:08,526Z lrauvNc4ToNetcdf.py processResampleNc4File():1025 Variable platform_battery_charge empty so skipping INFO 2019-11-15 02:27:08,531Z lrauvNc4ToNetcdf.py processResampleNc4File():1025 Variable platform_battery_voltage empty so skipping WARNING 2019-11-15 02:27:08,531Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'platform_average_current' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191113_20191114/20191113T182913/201911131829_201911131901.nc4 INFO 2019-11-15 02:27:08,547Z lrauvNc4ToNetcdf.py createSeries():225 platform_pitch_angle: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4570 4571 4572 4573 4574 4575 4576 4577 4578 4579] INFO 2019-11-15 02:27:08,554Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019'] INFO 2019-11-15 02:27:08,561Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable platform_pitch_angle DEBUG 2019-11-15 02:27:08,625Z lrauvNc4ToNetcdf.py createNav():477 calling ts.resample() for pitch DEBUG 2019-11-15 02:27:08,629Z lrauvNc4ToNetcdf.py createNav():479 calling self.interpolate() for pitch INFO 2019-11-15 02:27:08,630Z lrauvNc4ToNetcdf.py createNav():489 platform_pitch_angle -> pitch: {'units': 'rad', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-11-15 02:27:08,645Z lrauvNc4ToNetcdf.py createSeries():225 platform_roll_angle: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4570 4571 4572 4573 4574 4575 4576 4577 4578 4579] INFO 2019-11-15 02:27:08,652Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019'] INFO 2019-11-15 02:27:08,659Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable platform_roll_angle DEBUG 2019-11-15 02:27:08,723Z lrauvNc4ToNetcdf.py createNav():477 calling ts.resample() for roll DEBUG 2019-11-15 02:27:08,726Z lrauvNc4ToNetcdf.py createNav():479 calling self.interpolate() for roll INFO 2019-11-15 02:27:08,728Z lrauvNc4ToNetcdf.py createNav():489 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-11-15 02:27:08,742Z lrauvNc4ToNetcdf.py createSeries():225 platform_orientation: v_t values found before 2019-11-13 18:29:00 and after 2019-11-13 19:01:00: [4570 4571 4572 4573 4574 4575 4576 4577 4578 4579] INFO 2019-11-15 02:27:08,749Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:00 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:01 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:02 2019', 'Wed Nov 13 19:01:03 2019', 'Wed Nov 13 19:01:03 2019'] INFO 2019-11-15 02:27:08,755Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09 1.57367166e+09] for variable platform_orientation DEBUG 2019-11-15 02:27:08,821Z lrauvNc4ToNetcdf.py createNav():477 calling ts.resample() for yaw DEBUG 2019-11-15 02:27:08,824Z lrauvNc4ToNetcdf.py createNav():479 calling self.interpolate() for yaw INFO 2019-11-15 02:27:08,825Z lrauvNc4ToNetcdf.py createNav():489 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-11-15 02:27:08,826Z lrauvNc4ToNetcdf.py nudge_coords():609 /mbari/LRAUV/whoidhs/missionlogs/2019/20191113_20191114/20191113T182913/201911131829_201911131901.nc4 DEBUG 2019-11-15 02:27:08,913Z lrauvNc4ToNetcdf.py var_series():597 longitude: rad_to_deg = True DEBUG 2019-11-15 02:27:09,002Z lrauvNc4ToNetcdf.py var_series():597 latitude: rad_to_deg = True DEBUG 2019-11-15 02:27:09,035Z lrauvNc4ToNetcdf.py var_series():597 longitude_fix: rad_to_deg = False DEBUG 2019-11-15 02:27:09,066Z lrauvNc4ToNetcdf.py var_series():597 latitude_fix: rad_to_deg = False INFO 2019-11-15 02:27:09,067Z lrauvNc4ToNetcdf.py nudge_coords():627 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2019-11-15 02:27:09,069Z lrauvNc4ToNetcdf.py nudge_coords():643 - - - 3593 24.19 - - - INFO 2019-11-15 02:27:09,072Z lrauvNc4ToNetcdf.py nudge_coords():665 0: 0.345 -0.0000506 0.0004760 1039 6.99 7.96 12.62 2019-11-13 19:00:24.849340916 INFO 2019-11-15 02:27:09,078Z lrauvNc4ToNetcdf.py nudge_coords():695 2: - - - 97 0.65 - - INFO 2019-11-15 02:27:09,079Z lrauvNc4ToNetcdf.py nudge_coords():699 Points in final series = 4729 DEBUG 2019-11-15 02:27:09,079Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():525 Constructing trackingdb url to 3600 seconds beyond time range of file INFO 2019-11-15 02:27:09,093Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():533 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20191113T172913/20191113T200103/data.csv INFO 2019-11-15 02:27:09,109Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():556 Found 0 position values from the Tracking database INFO 2019-11-15 02:27:09,113Z lrauvNc4ToNetcdf.py processResampleNc4File():1120 ['control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'fix_time', 'fix_latitude', 'fix_longitude', 'PAR', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] DEBUG 2019-11-15 02:27:09,114Z lrauvNc4ToNetcdf.py write_netcdf():120 Creating netCDF file /mbari/LRAUV/whoidhs/missionlogs/2019/20191113_20191114/20191113T182913/201911131829_201911131901_2S_scieng.nc DEBUG 2019-11-15 02:27:09,122Z lrauvNc4ToNetcdf.py write_netcdf():144 Adding in record variable fix_time DEBUG 2019-11-15 02:27:09,145Z lrauvNc4ToNetcdf.py write_netcdf():144 Adding in record variable time DEBUG 2019-11-15 02:27:09,157Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_buoyancy_position DEBUG 2019-11-15 02:27:09,169Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_elevator_angle DEBUG 2019-11-15 02:27:09,180Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_mass_position DEBUG 2019-11-15 02:27:09,193Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable fix_latitude DEBUG 2019-11-15 02:27:09,206Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable fix_longitude DEBUG 2019-11-15 02:27:09,218Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable PAR DEBUG 2019-11-15 02:27:09,230Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_rudder_angle DEBUG 2019-11-15 02:27:09,247Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_propeller_rotation_rate DEBUG 2019-11-15 02:27:09,260Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources DEBUG 2019-11-15 02:27:09,272Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pose_longitude_DeadReckonUsingMultipleVelocitySources DEBUG 2019-11-15 02:27:09,290Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pose_latitude_DeadReckonUsingMultipleVelocitySources DEBUG 2019-11-15 02:27:09,303Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pose_depth_DeadReckonUsingMultipleVelocitySources DEBUG 2019-11-15 02:27:09,315Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pitch DEBUG 2019-11-15 02:27:09,327Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable roll DEBUG 2019-11-15 02:27:09,339Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable yaw DEBUG 2019-11-15 02:27:09,351Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable latitude DEBUG 2019-11-15 02:27:09,364Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable longitude DEBUG 2019-11-15 02:27:09,376Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable depth DEBUG 2019-11-15 02:27:09,388Z lrauvNc4ToNetcdf.py write_netcdf():163 Adding in global metadata INFO 2019-11-15 02:27:09,604Z lrauvNc4ToNetcdf.py processResampleNc4File():1123 Wrote /mbari/LRAUV/whoidhs/missionlogs/2019/20191113_20191114/20191113T182913/201911131829_201911131901_2S_scieng.nc