INFO 2019-12-06 02:14:01,344Z lrauvNc4ToNetcdf.py processResampleNc4File():979 Reading /mbari/LRAUV/whoidhs/missionlogs/2019/20191203_20191205/20191204T083253/201912040832_201912041608.nc4 file... INFO 2019-12-06 02:14:01,345Z lrauvNc4ToNetcdf.py processResampleNc4File():980 After copying to /tmp/201912040832_201912041608.nc4 INFO 2019-12-06 02:14:02,478Z lrauvNc4ToNetcdf.py processResampleNc4File():982 Read file /mbari/LRAUV/whoidhs/missionlogs/2019/20191203_20191205/20191204T083253/201912040832_201912041608.nc4 INFO 2019-12-06 02:14:02,505Z lrauvNc4ToNetcdf.py createSeries():225 latitude: v_t values found before 2019-12-04 08:32:00 and after 2019-12-04 16:08:00: [67467 67468 67469 67470 67471 67472 67473 67474 67475 67476] INFO 2019-12-06 02:14:02,514Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:03 2019', 'Wed Dec 4 16:08:03 2019'] INFO 2019-12-06 02:14:02,521Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09] for variable latitude INFO 2019-12-06 02:14:03,307Z lrauvNc4ToNetcdf.py createSeries():225 longitude: v_t values found before 2019-12-04 08:32:00 and after 2019-12-04 16:08:00: [67467 67468 67469 67470 67471 67472 67473 67474 67475 67476] INFO 2019-12-06 02:14:03,316Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:03 2019', 'Wed Dec 4 16:08:03 2019'] INFO 2019-12-06 02:14:03,324Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09] for variable longitude INFO 2019-12-06 02:14:04,123Z lrauvNc4ToNetcdf.py createSeries():225 depth: v_t values found before 2019-12-04 08:32:00 and after 2019-12-04 16:08:00: [67468 67469 67470 67471 67472 67473 67474 67475 67476] INFO 2019-12-06 02:14:04,133Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:03 2019', 'Wed Dec 4 16:08:03 2019'] INFO 2019-12-06 02:14:04,140Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09] for variable depth INFO 2019-12-06 02:14:04,918Z lrauvNc4ToNetcdf.py createSeries():225 time: v_t values found before 2019-12-04 08:32:00 and after 2019-12-04 16:08:00: [67468 67469 67470 67471 67472 67473 67474 67475 67476] INFO 2019-12-06 02:14:04,927Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:03 2019', 'Wed Dec 4 16:08:03 2019'] INFO 2019-12-06 02:14:04,935Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09] for variable time INFO 2019-12-06 02:14:05,718Z lrauvNc4ToNetcdf.py createSeries():225 latitude: v_t values found before 2019-12-04 08:32:00 and after 2019-12-04 16:08:00: [67467 67468 67469 67470 67471 67472 67473 67474 67475 67476] INFO 2019-12-06 02:14:05,728Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:03 2019', 'Wed Dec 4 16:08:03 2019'] INFO 2019-12-06 02:14:05,735Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09] for variable latitude INFO 2019-12-06 02:14:06,520Z lrauvNc4ToNetcdf.py createSeries():225 longitude: v_t values found before 2019-12-04 08:32:00 and after 2019-12-04 16:08:00: [67467 67468 67469 67470 67471 67472 67473 67474 67475 67476] INFO 2019-12-06 02:14:06,529Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:03 2019', 'Wed Dec 4 16:08:03 2019'] INFO 2019-12-06 02:14:06,537Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09] for variable longitude INFO 2019-12-06 02:14:07,320Z lrauvNc4ToNetcdf.py createSeries():225 depth: v_t values found before 2019-12-04 08:32:00 and after 2019-12-04 16:08:00: [67468 67469 67470 67471 67472 67473 67474 67475 67476] INFO 2019-12-06 02:14:07,331Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:03 2019', 'Wed Dec 4 16:08:03 2019'] INFO 2019-12-06 02:14:07,338Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09] for variable depth INFO 2019-12-06 02:14:08,119Z lrauvNc4ToNetcdf.py createSeries():225 time: v_t values found before 2019-12-04 08:32:00 and after 2019-12-04 16:08:00: [67468 67469 67470 67471 67472 67473 67474 67475 67476] INFO 2019-12-06 02:14:08,128Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:03 2019', 'Wed Dec 4 16:08:03 2019'] INFO 2019-12-06 02:14:08,136Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09] for variable time INFO 2019-12-06 02:14:08,920Z lrauvNc4ToNetcdf.py createSeries():225 latitude: v_t values found before 2019-12-04 08:32:00 and after 2019-12-04 16:08:00: [67467 67468 67469 67470 67471 67472 67473 67474 67475 67476] INFO 2019-12-06 02:14:08,929Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:03 2019', 'Wed Dec 4 16:08:03 2019'] INFO 2019-12-06 02:14:08,936Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09] for variable latitude INFO 2019-12-06 02:14:09,730Z lrauvNc4ToNetcdf.py createSeries():225 longitude: v_t values found before 2019-12-04 08:32:00 and after 2019-12-04 16:08:00: [67467 67468 67469 67470 67471 67472 67473 67474 67475 67476] INFO 2019-12-06 02:14:09,739Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:03 2019', 'Wed Dec 4 16:08:03 2019'] INFO 2019-12-06 02:14:09,746Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09] for variable longitude INFO 2019-12-06 02:14:10,533Z lrauvNc4ToNetcdf.py createSeries():225 depth: v_t values found before 2019-12-04 08:32:00 and after 2019-12-04 16:08:00: [67468 67469 67470 67471 67472 67473 67474 67475 67476] INFO 2019-12-06 02:14:10,542Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:03 2019', 'Wed Dec 4 16:08:03 2019'] INFO 2019-12-06 02:14:10,549Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09] for variable depth INFO 2019-12-06 02:14:11,334Z lrauvNc4ToNetcdf.py createSeries():225 time: v_t values found before 2019-12-04 08:32:00 and after 2019-12-04 16:08:00: [67468 67469 67470 67471 67472 67473 67474 67475 67476] INFO 2019-12-06 02:14:11,342Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:03 2019', 'Wed Dec 4 16:08:03 2019'] INFO 2019-12-06 02:14:11,350Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09] for variable time INFO 2019-12-06 02:14:12,143Z lrauvNc4ToNetcdf.py createSeries():225 latitude: v_t values found before 2019-12-04 08:32:00 and after 2019-12-04 16:08:00: [67467 67468 67469 67470 67471 67472 67473 67474 67475 67476] INFO 2019-12-06 02:14:12,153Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:03 2019', 'Wed Dec 4 16:08:03 2019'] INFO 2019-12-06 02:14:12,160Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09] for variable latitude INFO 2019-12-06 02:14:12,945Z lrauvNc4ToNetcdf.py createSeries():225 longitude: v_t values found before 2019-12-04 08:32:00 and after 2019-12-04 16:08:00: [67467 67468 67469 67470 67471 67472 67473 67474 67475 67476] INFO 2019-12-06 02:14:12,954Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:03 2019', 'Wed Dec 4 16:08:03 2019'] INFO 2019-12-06 02:14:12,962Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09] for variable longitude INFO 2019-12-06 02:14:13,747Z lrauvNc4ToNetcdf.py createSeries():225 depth: v_t values found before 2019-12-04 08:32:00 and after 2019-12-04 16:08:00: [67468 67469 67470 67471 67472 67473 67474 67475 67476] INFO 2019-12-06 02:14:13,756Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:03 2019', 'Wed Dec 4 16:08:03 2019'] INFO 2019-12-06 02:14:13,764Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09] for variable depth INFO 2019-12-06 02:14:14,545Z lrauvNc4ToNetcdf.py createSeries():225 time: v_t values found before 2019-12-04 08:32:00 and after 2019-12-04 16:08:00: [67468 67469 67470 67471 67472 67473 67474 67475 67476] INFO 2019-12-06 02:14:14,553Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:03 2019', 'Wed Dec 4 16:08:03 2019'] INFO 2019-12-06 02:14:14,561Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09] for variable time INFO 2019-12-06 02:14:15,333Z lrauvNc4ToNetcdf.py processResampleNc4File():987 Creating t variable of the time indexes WARNING 2019-12-06 02:14:15,352Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191203_20191205/20191204T083253/201912040832_201912041608.nc4 INFO 2019-12-06 02:14:15,440Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position INFO 2019-12-06 02:14:15,443Z lrauvNc4ToNetcdf.py processResampleNc4File():1025 Variable sea_water_salinity empty so skipping INFO 2019-12-06 02:14:15,446Z lrauvNc4ToNetcdf.py processResampleNc4File():1025 Variable sea_water_temperature empty so skipping WARNING 2019-12-06 02:14:15,446Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191203_20191205/20191204T083253/201912040832_201912041608.nc4 WARNING 2019-12-06 02:14:15,446Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191203_20191205/20191204T083253/201912040832_201912041608.nc4 INFO 2019-12-06 02:14:15,550Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group ElevatorServo parameter platform_elevator_angle renaming to control_inputs_elevator_angle WARNING 2019-12-06 02:14:15,550Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191203_20191205/20191204T083253/201912040832_201912041608.nc4 INFO 2019-12-06 02:14:15,603Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2019-12-06 02:14:15,610Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2019-12-06 02:14:15,617Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2019-12-06 02:14:15,624Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude INFO 2019-12-06 02:14:15,630Z lrauvNc4ToNetcdf.py createSeries():225 downwelling_photosynthetic_photon_flux_in_sea_water: v_t values found before 2019-12-04 08:32:00 and after 2019-12-04 16:08:00: [67468 67469 67470 67471 67472 67473 67474 67475 67476] INFO 2019-12-06 02:14:15,631Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:03 2019', 'Wed Dec 4 16:08:03 2019'] INFO 2019-12-06 02:14:15,632Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09] for variable downwelling_photosynthetic_photon_flux_in_sea_water INFO 2019-12-06 02:14:16,424Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2019-12-06 02:14:17,111Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group RudderServo parameter platform_rudder_angle renaming to control_inputs_rudder_angle INFO 2019-12-06 02:14:17,964Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group ThrusterServo parameter platform_propeller_rotation_rate renaming to control_inputs_propeller_rotation_rate WARNING 2019-12-06 02:14:17,965Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'mass_concentration_of_chlorophyll_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191203_20191205/20191204T083253/201912040832_201912041608.nc4 WARNING 2019-12-06 02:14:17,965Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'Output470' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191203_20191205/20191204T083253/201912040832_201912041608.nc4 WARNING 2019-12-06 02:14:17,965Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'Output650' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191203_20191205/20191204T083253/201912040832_201912041608.nc4 INFO 2019-12-06 02:14:17,968Z lrauvNc4ToNetcdf.py processResampleNc4File():1025 Variable concentration_of_chromophoric_dissolved_organic_matter_in_sea_water empty so skipping INFO 2019-12-06 02:14:17,971Z lrauvNc4ToNetcdf.py processResampleNc4File():1025 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2019-12-06 02:14:17,974Z lrauvNc4ToNetcdf.py processResampleNc4File():1025 Variable BackscatteringCoeff700nm empty so skipping INFO 2019-12-06 02:14:17,976Z lrauvNc4ToNetcdf.py processResampleNc4File():1025 Variable VolumeScatCoeff117deg700nm empty so skipping INFO 2019-12-06 02:14:17,979Z lrauvNc4ToNetcdf.py processResampleNc4File():1025 Variable mass_concentration_of_petroleum_hydrocarbons_in_sea_water empty so skipping INFO 2019-12-06 02:14:17,985Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group DeadReckonUsingMultipleVelocitySources parameter fix_residual_percent_distance_traveled renaming to fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources INFO 2019-12-06 02:14:17,992Z lrauvNc4ToNetcdf.py createSeries():225 longitude: v_t values found before 2019-12-04 08:32:00 and after 2019-12-04 16:08:00: [67467 67468 67469 67470 67471 67472 67473 67474 67475 67476] INFO 2019-12-06 02:14:17,993Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:03 2019', 'Wed Dec 4 16:08:03 2019'] INFO 2019-12-06 02:14:17,994Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09] for variable longitude INFO 2019-12-06 02:14:18,791Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2019-12-06 02:14:18,798Z lrauvNc4ToNetcdf.py createSeries():225 latitude: v_t values found before 2019-12-04 08:32:00 and after 2019-12-04 16:08:00: [67467 67468 67469 67470 67471 67472 67473 67474 67475 67476] INFO 2019-12-06 02:14:18,799Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:03 2019', 'Wed Dec 4 16:08:03 2019'] INFO 2019-12-06 02:14:18,800Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09] for variable latitude INFO 2019-12-06 02:14:19,585Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2019-12-06 02:14:19,590Z lrauvNc4ToNetcdf.py createSeries():225 depth: v_t values found before 2019-12-04 08:32:00 and after 2019-12-04 16:08:00: [67467 67468 67469 67470 67471 67472 67473 67474 67475 67476] INFO 2019-12-06 02:14:19,591Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:03 2019', 'Wed Dec 4 16:08:03 2019'] INFO 2019-12-06 02:14:19,592Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09] for variable depth INFO 2019-12-06 02:14:20,377Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources WARNING 2019-12-06 02:14:20,377Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'fix_residual_percent_distance_traveled' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191203_20191205/20191204T083253/201912040832_201912041608.nc4 WARNING 2019-12-06 02:14:20,378Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'longitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191203_20191205/20191204T083253/201912040832_201912041608.nc4 WARNING 2019-12-06 02:14:20,378Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'latitude' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191203_20191205/20191204T083253/201912040832_201912041608.nc4 WARNING 2019-12-06 02:14:20,378Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'depth' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191203_20191205/20191204T083253/201912040832_201912041608.nc4 INFO 2019-12-06 02:14:20,391Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2019-12-06 02:14:20,401Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage WARNING 2019-12-06 02:14:20,401Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'platform_average_current' not in /mbari/LRAUV/whoidhs/missionlogs/2019/20191203_20191205/20191204T083253/201912040832_201912041608.nc4 INFO 2019-12-06 02:14:20,428Z lrauvNc4ToNetcdf.py createSeries():225 platform_pitch_angle: v_t values found before 2019-12-04 08:32:00 and after 2019-12-04 16:08:00: [65147 65148 65149 65150 65151 65152 65153] INFO 2019-12-06 02:14:20,437Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:02 2019'] INFO 2019-12-06 02:14:20,445Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09] for variable platform_pitch_angle DEBUG 2019-12-06 02:14:21,188Z lrauvNc4ToNetcdf.py createNav():477 calling ts.resample() for pitch DEBUG 2019-12-06 02:14:21,200Z lrauvNc4ToNetcdf.py createNav():479 calling self.interpolate() for pitch INFO 2019-12-06 02:14:21,202Z lrauvNc4ToNetcdf.py createNav():489 platform_pitch_angle -> pitch: {'units': 'rad', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-12-06 02:14:21,227Z lrauvNc4ToNetcdf.py createSeries():225 platform_roll_angle: v_t values found before 2019-12-04 08:32:00 and after 2019-12-04 16:08:00: [65147 65148 65149 65150 65151 65152 65153] INFO 2019-12-06 02:14:21,237Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:02 2019'] INFO 2019-12-06 02:14:21,245Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09] for variable platform_roll_angle DEBUG 2019-12-06 02:14:21,982Z lrauvNc4ToNetcdf.py createNav():477 calling ts.resample() for roll DEBUG 2019-12-06 02:14:21,993Z lrauvNc4ToNetcdf.py createNav():479 calling self.interpolate() for roll INFO 2019-12-06 02:14:21,995Z lrauvNc4ToNetcdf.py createNav():489 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-12-06 02:14:22,021Z lrauvNc4ToNetcdf.py createSeries():225 platform_orientation: v_t values found before 2019-12-04 08:32:00 and after 2019-12-04 16:08:00: [65147 65148 65149 65150 65151 65152 65153] INFO 2019-12-06 02:14:22,030Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:00 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:01 2019', 'Wed Dec 4 16:08:02 2019', 'Wed Dec 4 16:08:02 2019'] INFO 2019-12-06 02:14:22,038Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09 1.57547568e+09] for variable platform_orientation DEBUG 2019-12-06 02:14:22,775Z lrauvNc4ToNetcdf.py createNav():477 calling ts.resample() for yaw DEBUG 2019-12-06 02:14:22,786Z lrauvNc4ToNetcdf.py createNav():479 calling self.interpolate() for yaw INFO 2019-12-06 02:14:22,788Z lrauvNc4ToNetcdf.py createNav():489 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2019-12-06 02:14:22,789Z lrauvNc4ToNetcdf.py nudge_coords():609 /mbari/LRAUV/whoidhs/missionlogs/2019/20191203_20191205/20191204T083253/201912040832_201912041608.nc4 DEBUG 2019-12-06 02:14:23,592Z lrauvNc4ToNetcdf.py var_series():597 longitude: rad_to_deg = True DEBUG 2019-12-06 02:14:24,386Z lrauvNc4ToNetcdf.py var_series():597 latitude: rad_to_deg = True DEBUG 2019-12-06 02:14:24,428Z lrauvNc4ToNetcdf.py var_series():597 longitude_fix: rad_to_deg = False DEBUG 2019-12-06 02:14:24,464Z lrauvNc4ToNetcdf.py var_series():597 latitude_fix: rad_to_deg = False INFO 2019-12-06 02:14:24,465Z lrauvNc4ToNetcdf.py nudge_coords():627 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2019-12-06 02:14:24,467Z lrauvNc4ToNetcdf.py nudge_coords():643 - - - 1679 11.30 - - - INFO 2019-12-06 02:14:24,474Z lrauvNc4ToNetcdf.py nudge_coords():665 0: 0.336 -0.0011038 -0.0001227 1140 7.68 -1.85 -2.96 2019-12-04 08:51:52.801860094 INFO 2019-12-06 02:14:24,482Z lrauvNc4ToNetcdf.py nudge_coords():665 1: 0.314 0.0075244 0.0021903 64166 432.37 0.59 0.94 2019-12-04 16:04:15.387188911 INFO 2019-12-06 02:14:24,496Z lrauvNc4ToNetcdf.py nudge_coords():695 3: - - - 492 3.80 - - INFO 2019-12-06 02:14:24,496Z lrauvNc4ToNetcdf.py nudge_coords():699 Points in final series = 65798 DEBUG 2019-12-06 02:14:24,497Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():525 Constructing trackingdb url to 3600 seconds beyond time range of file INFO 2019-12-06 02:14:24,516Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():533 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20191204T073253/20191204T170803/data.csv INFO 2019-12-06 02:14:24,534Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():556 Found 0 position values from the Tracking database INFO 2019-12-06 02:14:24,540Z lrauvNc4ToNetcdf.py processResampleNc4File():1120 ['control_inputs_buoyancy_position', 'control_inputs_elevator_angle', 'control_inputs_mass_position', 'fix_time', 'fix_latitude', 'fix_longitude', 'PAR', 'control_inputs_rudder_angle', 'control_inputs_propeller_rotation_rate', 'fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_battery_charge', 'health_platform_average_voltage', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] DEBUG 2019-12-06 02:14:24,543Z lrauvNc4ToNetcdf.py write_netcdf():120 Creating netCDF file /mbari/LRAUV/whoidhs/missionlogs/2019/20191203_20191205/20191204T083253/201912040832_201912041608_2S_scieng.nc DEBUG 2019-12-06 02:14:24,554Z lrauvNc4ToNetcdf.py write_netcdf():144 Adding in record variable fix_time DEBUG 2019-12-06 02:14:24,608Z lrauvNc4ToNetcdf.py write_netcdf():144 Adding in record variable time DEBUG 2019-12-06 02:14:24,622Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_buoyancy_position DEBUG 2019-12-06 02:14:24,635Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_elevator_angle DEBUG 2019-12-06 02:14:24,647Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_mass_position DEBUG 2019-12-06 02:14:24,659Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable fix_latitude DEBUG 2019-12-06 02:14:24,671Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable fix_longitude DEBUG 2019-12-06 02:14:24,684Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable PAR DEBUG 2019-12-06 02:14:24,696Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_rudder_angle DEBUG 2019-12-06 02:14:24,721Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_propeller_rotation_rate DEBUG 2019-12-06 02:14:24,734Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable fix_residual_percent_distance_traveled_DeadReckonUsingMultipleVelocitySources DEBUG 2019-12-06 02:14:24,746Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pose_longitude_DeadReckonUsingMultipleVelocitySources DEBUG 2019-12-06 02:14:24,769Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pose_latitude_DeadReckonUsingMultipleVelocitySources DEBUG 2019-12-06 02:14:24,781Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pose_depth_DeadReckonUsingMultipleVelocitySources DEBUG 2019-12-06 02:14:24,794Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable health_platform_battery_charge DEBUG 2019-12-06 02:14:24,806Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable health_platform_average_voltage DEBUG 2019-12-06 02:14:24,818Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pitch DEBUG 2019-12-06 02:14:24,831Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable roll DEBUG 2019-12-06 02:14:24,843Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable yaw DEBUG 2019-12-06 02:14:24,855Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable latitude DEBUG 2019-12-06 02:14:24,868Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable longitude DEBUG 2019-12-06 02:14:24,881Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable depth DEBUG 2019-12-06 02:14:24,893Z lrauvNc4ToNetcdf.py write_netcdf():163 Adding in global metadata INFO 2019-12-06 02:14:25,157Z lrauvNc4ToNetcdf.py processResampleNc4File():1123 Wrote /mbari/LRAUV/whoidhs/missionlogs/2019/20191203_20191205/20191204T083253/201912040832_201912041608_2S_scieng.nc