INFO 2020-02-12 01:42:57,092Z lrauvNc4ToNetcdf.py processResampleNc4File():979 Reading /mbari/LRAUV/whoidhs/missionlogs/2020/20200209_20200211/20200210T224734/202002102247_202002102319.nc4 file... INFO 2020-02-12 01:42:57,093Z lrauvNc4ToNetcdf.py processResampleNc4File():980 After copying to /tmp/202002102247_202002102319.nc4 INFO 2020-02-12 01:42:58,157Z lrauvNc4ToNetcdf.py processResampleNc4File():982 Read file /mbari/LRAUV/whoidhs/missionlogs/2020/20200209_20200211/20200210T224734/202002102247_202002102319.nc4 INFO 2020-02-12 01:42:58,177Z lrauvNc4ToNetcdf.py createSeries():225 latitude: v_t values found before 2020-02-10 22:47:00 and after 2020-02-10 23:19:00: [4661 4662 4663 4664 4665 4666 4667 4668 4669 4670 4671] INFO 2020-02-12 01:42:58,186Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:04 2020'] INFO 2020-02-12 01:42:58,194Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09] for variable latitude INFO 2020-02-12 01:42:58,278Z lrauvNc4ToNetcdf.py createSeries():225 longitude: v_t values found before 2020-02-10 22:47:00 and after 2020-02-10 23:19:00: [4661 4662 4663 4664 4665 4666 4667 4668 4669 4670 4671] INFO 2020-02-12 01:42:58,286Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:04 2020'] INFO 2020-02-12 01:42:58,293Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09] for variable longitude INFO 2020-02-12 01:42:58,376Z lrauvNc4ToNetcdf.py createSeries():225 depth: v_t values found before 2020-02-10 22:47:00 and after 2020-02-10 23:19:00: [4662 4663 4664 4665 4666 4667 4668 4669 4670 4671 4672] INFO 2020-02-12 01:42:58,384Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:04 2020', 'Mon Feb 10 23:19:04 2020'] INFO 2020-02-12 01:42:58,392Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09] for variable depth INFO 2020-02-12 01:42:58,474Z lrauvNc4ToNetcdf.py createSeries():225 time: v_t values found before 2020-02-10 22:47:00 and after 2020-02-10 23:19:00: [4662 4663 4664 4665 4666 4667 4668 4669 4670 4671 4672] INFO 2020-02-12 01:42:58,482Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:04 2020'] INFO 2020-02-12 01:42:58,489Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09] for variable time INFO 2020-02-12 01:42:58,571Z lrauvNc4ToNetcdf.py createSeries():225 latitude: v_t values found before 2020-02-10 22:47:00 and after 2020-02-10 23:19:00: [4661 4662 4663 4664 4665 4666 4667 4668 4669 4670 4671] INFO 2020-02-12 01:42:58,579Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:04 2020'] INFO 2020-02-12 01:42:58,586Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09] for variable latitude INFO 2020-02-12 01:42:58,668Z lrauvNc4ToNetcdf.py createSeries():225 longitude: v_t values found before 2020-02-10 22:47:00 and after 2020-02-10 23:19:00: [4661 4662 4663 4664 4665 4666 4667 4668 4669 4670 4671] INFO 2020-02-12 01:42:58,676Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:04 2020'] INFO 2020-02-12 01:42:58,683Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09] for variable longitude INFO 2020-02-12 01:42:58,765Z lrauvNc4ToNetcdf.py createSeries():225 depth: v_t values found before 2020-02-10 22:47:00 and after 2020-02-10 23:19:00: [4662 4663 4664 4665 4666 4667 4668 4669 4670 4671 4672] INFO 2020-02-12 01:42:58,772Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:04 2020', 'Mon Feb 10 23:19:04 2020'] INFO 2020-02-12 01:42:58,783Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09] for variable depth INFO 2020-02-12 01:42:58,865Z lrauvNc4ToNetcdf.py createSeries():225 time: v_t values found before 2020-02-10 22:47:00 and after 2020-02-10 23:19:00: [4662 4663 4664 4665 4666 4667 4668 4669 4670 4671 4672] INFO 2020-02-12 01:42:58,873Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:04 2020'] INFO 2020-02-12 01:42:58,881Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09] for variable time INFO 2020-02-12 01:42:58,962Z lrauvNc4ToNetcdf.py createSeries():225 latitude: v_t values found before 2020-02-10 22:47:00 and after 2020-02-10 23:19:00: [4661 4662 4663 4664 4665 4666 4667 4668 4669 4670 4671] INFO 2020-02-12 01:42:58,970Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:04 2020'] INFO 2020-02-12 01:42:58,978Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09] for variable latitude INFO 2020-02-12 01:42:59,059Z lrauvNc4ToNetcdf.py createSeries():225 longitude: v_t values found before 2020-02-10 22:47:00 and after 2020-02-10 23:19:00: [4661 4662 4663 4664 4665 4666 4667 4668 4669 4670 4671] INFO 2020-02-12 01:42:59,067Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:04 2020'] INFO 2020-02-12 01:42:59,075Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09] for variable longitude INFO 2020-02-12 01:42:59,157Z lrauvNc4ToNetcdf.py createSeries():225 depth: v_t values found before 2020-02-10 22:47:00 and after 2020-02-10 23:19:00: [4662 4663 4664 4665 4666 4667 4668 4669 4670 4671 4672] INFO 2020-02-12 01:42:59,165Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:04 2020', 'Mon Feb 10 23:19:04 2020'] INFO 2020-02-12 01:42:59,172Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09] for variable depth INFO 2020-02-12 01:42:59,254Z lrauvNc4ToNetcdf.py createSeries():225 time: v_t values found before 2020-02-10 22:47:00 and after 2020-02-10 23:19:00: [4662 4663 4664 4665 4666 4667 4668 4669 4670 4671 4672] INFO 2020-02-12 01:42:59,262Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:04 2020'] INFO 2020-02-12 01:42:59,269Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09] for variable time INFO 2020-02-12 01:42:59,353Z lrauvNc4ToNetcdf.py createSeries():225 latitude: v_t values found before 2020-02-10 22:47:00 and after 2020-02-10 23:19:00: [4661 4662 4663 4664 4665 4666 4667 4668 4669 4670 4671] INFO 2020-02-12 01:42:59,365Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:04 2020'] INFO 2020-02-12 01:42:59,378Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09] for variable latitude INFO 2020-02-12 01:42:59,467Z lrauvNc4ToNetcdf.py createSeries():225 longitude: v_t values found before 2020-02-10 22:47:00 and after 2020-02-10 23:19:00: [4661 4662 4663 4664 4665 4666 4667 4668 4669 4670 4671] INFO 2020-02-12 01:42:59,475Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:04 2020'] INFO 2020-02-12 01:42:59,483Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09] for variable longitude INFO 2020-02-12 01:42:59,565Z lrauvNc4ToNetcdf.py createSeries():225 depth: v_t values found before 2020-02-10 22:47:00 and after 2020-02-10 23:19:00: [4662 4663 4664 4665 4666 4667 4668 4669 4670 4671 4672] INFO 2020-02-12 01:42:59,573Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:04 2020', 'Mon Feb 10 23:19:04 2020'] INFO 2020-02-12 01:42:59,581Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09] for variable depth INFO 2020-02-12 01:42:59,672Z lrauvNc4ToNetcdf.py createSeries():225 time: v_t values found before 2020-02-10 22:47:00 and after 2020-02-10 23:19:00: [4662 4663 4664 4665 4666 4667 4668 4669 4670 4671 4672] INFO 2020-02-12 01:42:59,680Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:04 2020'] INFO 2020-02-12 01:42:59,688Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09] for variable time INFO 2020-02-12 01:42:59,756Z lrauvNc4ToNetcdf.py processResampleNc4File():987 Creating t variable of the time indexes INFO 2020-02-12 01:42:59,768Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group NAL9602 parameter time_fix renaming to fix_time INFO 2020-02-12 01:42:59,774Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group NAL9602 parameter latitude_fix renaming to fix_latitude INFO 2020-02-12 01:42:59,781Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group NAL9602 parameter longitude_fix renaming to fix_longitude WARNING 2020-02-12 01:42:59,781Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'mass_concentration_of_oxygen_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2020/20200209_20200211/20200210T224734/202002102247_202002102319.nc4 INFO 2020-02-12 01:42:59,793Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group BuoyancyServo parameter platform_buoyancy_position renaming to control_inputs_buoyancy_position WARNING 2020-02-12 01:42:59,794Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2020/20200209_20200211/20200210T224734/202002102247_202002102319.nc4 WARNING 2020-02-12 01:42:59,794Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2020/20200209_20200211/20200210T224734/202002102247_202002102319.nc4 WARNING 2020-02-12 01:42:59,794Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'sea_water_salinity' not in /mbari/LRAUV/whoidhs/missionlogs/2020/20200209_20200211/20200210T224734/202002102247_202002102319.nc4 WARNING 2020-02-12 01:42:59,795Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'sea_water_temperature' not in /mbari/LRAUV/whoidhs/missionlogs/2020/20200209_20200211/20200210T224734/202002102247_202002102319.nc4 INFO 2020-02-12 01:42:59,797Z lrauvNc4ToNetcdf.py processResampleNc4File():1025 Variable platform_elevator_angle empty so skipping WARNING 2020-02-12 01:42:59,798Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'mole_concentration_of_nitrate_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2020/20200209_20200211/20200210T224734/202002102247_202002102319.nc4 INFO 2020-02-12 01:42:59,806Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group MassServo parameter platform_mass_position renaming to control_inputs_mass_position INFO 2020-02-12 01:42:59,808Z lrauvNc4ToNetcdf.py createSeries():225 downwelling_photosynthetic_photon_flux_in_sea_water: v_t values found before 2020-02-10 22:47:00 and after 2020-02-10 23:19:00: [4661 4662 4663 4664 4665 4666 4667 4668 4669 4670 4671 4672] INFO 2020-02-12 01:42:59,809Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:04 2020', 'Mon Feb 10 23:19:04 2020'] INFO 2020-02-12 01:42:59,810Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09] for variable downwelling_photosynthetic_photon_flux_in_sea_water INFO 2020-02-12 01:42:59,873Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group PAR_Licor parameter downwelling_photosynthetic_photon_flux_in_sea_water renaming to PAR INFO 2020-02-12 01:42:59,876Z lrauvNc4ToNetcdf.py processResampleNc4File():1025 Variable platform_rudder_angle empty so skipping INFO 2020-02-12 01:42:59,879Z lrauvNc4ToNetcdf.py processResampleNc4File():1025 Variable platform_propeller_rotation_rate empty so skipping WARNING 2020-02-12 01:42:59,879Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'mass_concentration_of_chlorophyll_in_sea_water' not in /mbari/LRAUV/whoidhs/missionlogs/2020/20200209_20200211/20200210T224734/202002102247_202002102319.nc4 WARNING 2020-02-12 01:42:59,880Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'Output470' not in /mbari/LRAUV/whoidhs/missionlogs/2020/20200209_20200211/20200210T224734/202002102247_202002102319.nc4 WARNING 2020-02-12 01:42:59,880Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'Output650' not in /mbari/LRAUV/whoidhs/missionlogs/2020/20200209_20200211/20200210T224734/202002102247_202002102319.nc4 INFO 2020-02-12 01:42:59,883Z lrauvNc4ToNetcdf.py processResampleNc4File():1025 Variable concentration_of_chromophoric_dissolved_organic_matter_in_sea_water empty so skipping INFO 2020-02-12 01:42:59,886Z lrauvNc4ToNetcdf.py processResampleNc4File():1025 Variable mass_concentration_of_chlorophyll_in_sea_water empty so skipping INFO 2020-02-12 01:42:59,888Z lrauvNc4ToNetcdf.py processResampleNc4File():1025 Variable BackscatteringCoeff700nm empty so skipping INFO 2020-02-12 01:42:59,891Z lrauvNc4ToNetcdf.py processResampleNc4File():1025 Variable VolumeScatCoeff117deg700nm empty so skipping INFO 2020-02-12 01:42:59,894Z lrauvNc4ToNetcdf.py processResampleNc4File():1025 Variable mass_concentration_of_petroleum_hydrocarbons_in_sea_water empty so skipping INFO 2020-02-12 01:42:59,897Z lrauvNc4ToNetcdf.py processResampleNc4File():1025 Variable fix_residual_percent_distance_traveled empty so skipping INFO 2020-02-12 01:42:59,898Z lrauvNc4ToNetcdf.py createSeries():225 longitude: v_t values found before 2020-02-10 22:47:00 and after 2020-02-10 23:19:00: [4661 4662 4663 4664 4665 4666 4667 4668 4669 4670 4671] INFO 2020-02-12 01:42:59,899Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:04 2020'] INFO 2020-02-12 01:42:59,900Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09] for variable longitude INFO 2020-02-12 01:42:59,962Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group DeadReckonUsingMultipleVelocitySources parameter longitude renaming to pose_longitude_DeadReckonUsingMultipleVelocitySources INFO 2020-02-12 01:42:59,964Z lrauvNc4ToNetcdf.py createSeries():225 latitude: v_t values found before 2020-02-10 22:47:00 and after 2020-02-10 23:19:00: [4661 4662 4663 4664 4665 4666 4667 4668 4669 4670 4671] INFO 2020-02-12 01:42:59,965Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:04 2020'] INFO 2020-02-12 01:42:59,966Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09] for variable latitude INFO 2020-02-12 01:43:00,028Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group DeadReckonUsingMultipleVelocitySources parameter latitude renaming to pose_latitude_DeadReckonUsingMultipleVelocitySources INFO 2020-02-12 01:43:00,030Z lrauvNc4ToNetcdf.py createSeries():225 depth: v_t values found before 2020-02-10 22:47:00 and after 2020-02-10 23:19:00: [4661 4662 4663 4664 4665 4666 4667 4668 4669 4670 4671] INFO 2020-02-12 01:43:00,031Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:04 2020'] INFO 2020-02-12 01:43:00,032Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09] for variable depth INFO 2020-02-12 01:43:00,093Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group DeadReckonUsingMultipleVelocitySources parameter depth renaming to pose_depth_DeadReckonUsingMultipleVelocitySources WARNING 2020-02-12 01:43:00,093Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'fix_residual_percent_distance_traveled' not in /mbari/LRAUV/whoidhs/missionlogs/2020/20200209_20200211/20200210T224734/202002102247_202002102319.nc4 WARNING 2020-02-12 01:43:00,094Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'longitude' not in /mbari/LRAUV/whoidhs/missionlogs/2020/20200209_20200211/20200210T224734/202002102247_202002102319.nc4 WARNING 2020-02-12 01:43:00,094Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'latitude' not in /mbari/LRAUV/whoidhs/missionlogs/2020/20200209_20200211/20200210T224734/202002102247_202002102319.nc4 WARNING 2020-02-12 01:43:00,094Z lrauvNc4ToNetcdf.py processResampleNc4File():1064 'depth' not in /mbari/LRAUV/whoidhs/missionlogs/2020/20200209_20200211/20200210T224734/202002102247_202002102319.nc4 INFO 2020-02-12 01:43:00,104Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group BPC1 parameter platform_battery_charge renaming to health_platform_battery_charge INFO 2020-02-12 01:43:00,114Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group BPC1 parameter platform_battery_voltage renaming to health_platform_average_voltage INFO 2020-02-12 01:43:00,120Z lrauvNc4ToNetcdf.py processResampleNc4File():1062 Found in group Onboard parameter platform_average_current renaming to health_platform_average_current INFO 2020-02-12 01:43:00,138Z lrauvNc4ToNetcdf.py createSeries():225 platform_pitch_angle: v_t values found before 2020-02-10 22:47:00 and after 2020-02-10 23:19:00: [4560 4562 4563 4564 4565 4566 4567 4568 4569] INFO 2020-02-12 01:43:00,171Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:04 2020', 'Mon Feb 10 23:19:04 2020'] INFO 2020-02-12 01:43:00,202Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09] for variable platform_pitch_angle DEBUG 2020-02-12 01:43:00,270Z lrauvNc4ToNetcdf.py createNav():477 calling ts.resample() for pitch DEBUG 2020-02-12 01:43:00,274Z lrauvNc4ToNetcdf.py createNav():479 calling self.interpolate() for pitch INFO 2020-02-12 01:43:00,275Z lrauvNc4ToNetcdf.py createNav():489 platform_pitch_angle -> pitch: {'units': 'rad', 'standard_name': 'platform_pitch_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-02-12 01:43:00,292Z lrauvNc4ToNetcdf.py createSeries():225 platform_roll_angle: v_t values found before 2020-02-10 22:47:00 and after 2020-02-10 23:19:00: [4560 4562 4563 4564 4565 4566 4567 4568 4569] INFO 2020-02-12 01:43:00,323Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:04 2020', 'Mon Feb 10 23:19:04 2020'] INFO 2020-02-12 01:43:00,355Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09] for variable platform_roll_angle DEBUG 2020-02-12 01:43:00,422Z lrauvNc4ToNetcdf.py createNav():477 calling ts.resample() for roll DEBUG 2020-02-12 01:43:00,426Z lrauvNc4ToNetcdf.py createNav():479 calling self.interpolate() for roll INFO 2020-02-12 01:43:00,427Z lrauvNc4ToNetcdf.py createNav():489 platform_roll_angle -> roll: {'units': 'rad', 'standard_name': 'platform_roll_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-02-12 01:43:00,444Z lrauvNc4ToNetcdf.py createSeries():225 platform_orientation: v_t values found before 2020-02-10 22:47:00 and after 2020-02-10 23:19:00: [4560 4562 4563 4564 4565 4566 4567 4568 4569] INFO 2020-02-12 01:43:00,476Z lrauvNc4ToNetcdf.py createSeries():226 Their times: ['Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:01 2020', 'Mon Feb 10 23:19:00 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:03 2020', 'Mon Feb 10 23:19:02 2020', 'Mon Feb 10 23:19:04 2020', 'Mon Feb 10 23:19:04 2020'] INFO 2020-02-12 01:43:00,507Z lrauvNc4ToNetcdf.py createSeries():227 Removing them: [1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09 1.58137674e+09] for variable platform_orientation DEBUG 2020-02-12 01:43:00,574Z lrauvNc4ToNetcdf.py createNav():477 calling ts.resample() for yaw DEBUG 2020-02-12 01:43:00,578Z lrauvNc4ToNetcdf.py createNav():479 calling self.interpolate() for yaw INFO 2020-02-12 01:43:00,579Z lrauvNc4ToNetcdf.py createNav():489 platform_orientation -> yaw: {'units': 'rad', 'standard_name': 'platform_yaw_angle', 'coordinates': 'time depth latitude longitude'} INFO 2020-02-12 01:43:00,580Z lrauvNc4ToNetcdf.py nudge_coords():609 /mbari/LRAUV/whoidhs/missionlogs/2020/20200209_20200211/20200210T224734/202002102247_202002102319.nc4 DEBUG 2020-02-12 01:43:00,671Z lrauvNc4ToNetcdf.py var_series():597 longitude: rad_to_deg = True DEBUG 2020-02-12 01:43:00,760Z lrauvNc4ToNetcdf.py var_series():597 latitude: rad_to_deg = True DEBUG 2020-02-12 01:43:00,796Z lrauvNc4ToNetcdf.py var_series():597 longitude_fix: rad_to_deg = False DEBUG 2020-02-12 01:43:00,831Z lrauvNc4ToNetcdf.py var_series():597 latitude_fix: rad_to_deg = False INFO 2020-02-12 01:43:00,831Z lrauvNc4ToNetcdf.py nudge_coords():627 seg# end_sec_diff end_lon_diff end_lat_diff len(segi) seg_min u_drift (cm/s) v_drift (cm/s) start datetime of segment INFO 2020-02-12 01:43:00,834Z lrauvNc4ToNetcdf.py nudge_coords():643 - - - 1362 9.19 - - - INFO 2020-02-12 01:43:00,836Z lrauvNc4ToNetcdf.py nudge_coords():665 0: 0.361 -0.0000519 0.0000085 881 5.92 0.17 0.27 2020-02-10 23:02:42.307531118 INFO 2020-02-12 01:43:00,843Z lrauvNc4ToNetcdf.py nudge_coords():665 1: 0.349 0.0000315 0.0000051 828 5.57 0.11 0.17 2020-02-10 23:08:16.840029001 INFO 2020-02-12 01:43:00,850Z lrauvNc4ToNetcdf.py nudge_coords():665 2: 0.344 -0.0000149 0.0000147 833 5.61 0.31 0.48 2020-02-10 23:13:53.751952887 INFO 2020-02-12 01:43:00,856Z lrauvNc4ToNetcdf.py nudge_coords():695 4: - - - 768 5.17 - - INFO 2020-02-12 01:43:00,856Z lrauvNc4ToNetcdf.py nudge_coords():699 Points in final series = 4672 DEBUG 2020-02-12 01:43:00,857Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():525 Constructing trackingdb url to 3600 seconds beyond time range of file INFO 2020-02-12 01:43:00,874Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():533 http://odss.mbari.org/trackingdb/position/whoidhs_ac/between/20200210T214734/20200211T001904/data.csv INFO 2020-02-12 01:43:00,890Z lrauvNc4ToNetcdf.py trackingdb_lat_lon():556 Found 0 position values from the Tracking database INFO 2020-02-12 01:43:00,893Z lrauvNc4ToNetcdf.py processResampleNc4File():1120 ['fix_time', 'fix_latitude', 'fix_longitude', 'control_inputs_buoyancy_position', 'control_inputs_mass_position', 'PAR', 'pose_longitude_DeadReckonUsingMultipleVelocitySources', 'pose_latitude_DeadReckonUsingMultipleVelocitySources', 'pose_depth_DeadReckonUsingMultipleVelocitySources', 'health_platform_battery_charge', 'health_platform_average_voltage', 'health_platform_average_current', 'pitch', 'roll', 'yaw', 'latitude', 'longitude', 'depth', 'time'] DEBUG 2020-02-12 01:43:00,895Z lrauvNc4ToNetcdf.py write_netcdf():120 Creating netCDF file /mbari/LRAUV/whoidhs/missionlogs/2020/20200209_20200211/20200210T224734/202002102247_202002102319_2S_scieng.nc DEBUG 2020-02-12 01:43:00,899Z lrauvNc4ToNetcdf.py write_netcdf():144 Adding in record variable fix_time DEBUG 2020-02-12 01:43:00,925Z lrauvNc4ToNetcdf.py write_netcdf():144 Adding in record variable time DEBUG 2020-02-12 01:43:00,936Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable fix_latitude DEBUG 2020-02-12 01:43:00,946Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable fix_longitude DEBUG 2020-02-12 01:43:00,955Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_buoyancy_position DEBUG 2020-02-12 01:43:00,965Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable control_inputs_mass_position DEBUG 2020-02-12 01:43:00,974Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable PAR DEBUG 2020-02-12 01:43:00,983Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pose_longitude_DeadReckonUsingMultipleVelocitySources DEBUG 2020-02-12 01:43:00,993Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pose_latitude_DeadReckonUsingMultipleVelocitySources DEBUG 2020-02-12 01:43:01,007Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pose_depth_DeadReckonUsingMultipleVelocitySources DEBUG 2020-02-12 01:43:01,017Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable health_platform_battery_charge DEBUG 2020-02-12 01:43:01,033Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable health_platform_average_voltage DEBUG 2020-02-12 01:43:01,042Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable health_platform_average_current DEBUG 2020-02-12 01:43:01,052Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable pitch DEBUG 2020-02-12 01:43:01,061Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable roll DEBUG 2020-02-12 01:43:01,070Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable yaw DEBUG 2020-02-12 01:43:01,080Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable latitude DEBUG 2020-02-12 01:43:01,090Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable longitude DEBUG 2020-02-12 01:43:01,099Z lrauvNc4ToNetcdf.py write_netcdf():156 Adding in record variable depth DEBUG 2020-02-12 01:43:01,109Z lrauvNc4ToNetcdf.py write_netcdf():163 Adding in global metadata INFO 2020-02-12 01:43:01,305Z lrauvNc4ToNetcdf.py processResampleNc4File():1123 Wrote /mbari/LRAUV/whoidhs/missionlogs/2020/20200209_20200211/20200210T224734/202002102247_202002102319_2S_scieng.nc