2020-06-02T15:44:42.829Z,1591112682.829 [Supervisor](DEBUG): Initializing supervisor.
2020-06-02T15:44:42.832Z,1591112682.832 [SyncHandler](DEBUG): Created PCaller Thread at 404514E0
2020-06-02T15:44:42.833Z,1591112682.833 [SyncHandler](INFO): Protected caller Thread ID is 9243
2020-06-02T15:44:42.833Z,1591112682.833 [ComponentRegistry](DEBUG): Component "controlThread" handled in its own thread.
2020-06-02T15:44:42.834Z,1591112682.834 [controlThread ThreadHandler](DEBUG): Created PCaller Thread at 404814E0
2020-06-02T15:44:42.834Z,1591112682.834 [controlThread ThreadHandler](INFO): Protected caller Thread ID is 9244
2020-06-02T15:44:42.837Z,1591112682.837 [ComponentRegistry](DEBUG): SyncComponent "CycleStarter" handled in the control thread.
2020-06-02T15:44:42.849Z,1591112682.849 [ComponentRegistry](DEBUG): Component "CommandLine" handled in its own thread.
2020-06-02T15:44:42.851Z,1591112682.851 [CommandLine ThreadHandler](DEBUG): Created PCaller Thread at 404B14E0
2020-06-02T15:44:42.851Z,1591112682.851 [CommandLine ThreadHandler](INFO): Protected caller Thread ID is 9245
2020-06-02T15:44:42.852Z,1591112682.852 [ComponentRegistry](DEBUG): Component "logger" handled in its own thread.
2020-06-02T15:44:42.852Z,1591112682.852 [logger ThreadHandler](DEBUG): Created PCaller Thread at 404E14E0
2020-06-02T15:44:42.853Z,1591112682.853 [logger ThreadHandler](INFO): Protected caller Thread ID is 9246
2020-06-02T15:44:42.855Z,1591112682.855 [ComponentRegistry](DEBUG): SyncComponent "LogSplitter" handled in the control thread.
2020-06-02T15:44:42.855Z,1591112682.855 [Supervisor](INFO): Looking for Config files in directory: Config/
2020-06-02T15:44:42.857Z,1591112682.857 [Supervisor](INFO): Opening Config file at: Config/vehicle.cfg
2020-06-02T15:44:43.279Z,1591112683.279 [ComponentRegistry](DEBUG): Loaded Config Component "Config/vehicle
2020-06-02T15:44:43.279Z,1591112683.279 [Supervisor](INFO): Opening Config file at: Config/Sample.cfg
2020-06-02T15:44:43.375Z,1591112683.375 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sample
2020-06-02T15:44:43.375Z,1591112683.375 [Supervisor](INFO): Opening Config file at: Config/Control.cfg
2020-06-02T15:44:43.686Z,1591112683.686 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Control
2020-06-02T15:44:43.687Z,1591112683.687 [Supervisor](INFO): Opening Config file at: Config/Estimation.cfg
2020-06-02T15:44:43.823Z,1591112683.823 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Estimation
2020-06-02T15:44:43.824Z,1591112683.824 [Supervisor](INFO): Opening Config file at: Config/BIT.cfg
2020-06-02T15:44:44.234Z,1591112684.234 [ComponentRegistry](DEBUG): Loaded Config Component "Config/BIT
2020-06-02T15:44:44.234Z,1591112684.234 [Supervisor](INFO): Opening Config file at: Config/Simulator.cfg
2020-06-02T15:44:44.675Z,1591112684.675 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Simulator
2020-06-02T15:44:44.676Z,1591112684.676 [Supervisor](INFO): Opening Config file at: Config/Navigation.cfg
2020-06-02T15:44:44.885Z,1591112684.885 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Navigation
2020-06-02T15:44:44.885Z,1591112684.885 [Supervisor](INFO): Opening Config file at: Config/Derivation.cfg
2020-06-02T15:44:45.028Z,1591112685.028 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Derivation
2020-06-02T15:44:45.028Z,1591112685.028 [Supervisor](INFO): Opening Config file at: Config/logger.cfg
2020-06-02T15:44:45.221Z,1591112685.221 [ComponentRegistry](DEBUG): Loaded Config Component "Config/logger
2020-06-02T15:44:45.221Z,1591112685.221 [Supervisor](INFO): Opening Config file at: Config/secure.cfg
2020-06-02T15:44:45.316Z,1591112685.316 [ComponentRegistry](DEBUG): Loaded Config Component "Config/secure
2020-06-02T15:44:45.317Z,1591112685.317 [Supervisor](INFO): Opening Config file at: Config/Dock.cfg
2020-06-02T15:44:45.512Z,1591112685.512 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Dock
2020-06-02T15:44:45.512Z,1591112685.512 [Supervisor](INFO): Opening Config file at: Config/Servo.cfg
2020-06-02T15:44:45.810Z,1591112685.810 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Servo
2020-06-02T15:44:45.810Z,1591112685.810 [Supervisor](INFO): Opening Config file at: Config/Guidance.cfg
2020-06-02T15:44:45.889Z,1591112685.889 [Supervisor](INFO): Opening Config file at: Config/workSite.cfg
2020-06-02T15:44:45.991Z,1591112685.991 [ComponentRegistry](DEBUG): Loaded Config Component "Config/workSite
2020-06-02T15:44:45.991Z,1591112685.991 [Supervisor](INFO): Opening Config file at: Config/Sensor.cfg
2020-06-02T15:44:46.631Z,1591112686.631 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Sensor
2020-06-02T15:44:46.631Z,1591112686.631 [Supervisor](INFO): Opening Config file at: Config/Science.cfg
2020-06-02T15:44:47.052Z,1591112687.052 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Science
2020-06-02T15:44:47.054Z,1591112687.054 [Supervisor](INFO): Looking for Config files in directory: Config/lrauv-whoidhs/
2020-06-02T15:44:47.055Z,1591112687.055 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/vehicle.cfg
2020-06-02T15:44:47.258Z,1591112687.258 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/Control.cfg
2020-06-02T15:44:47.355Z,1591112687.355 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/BIT.cfg
2020-06-02T15:44:47.451Z,1591112687.451 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/Battery.cfg
2020-06-02T15:44:47.675Z,1591112687.675 [ComponentRegistry](DEBUG): Loaded Config Component "Config/Battery
2020-06-02T15:44:47.676Z,1591112687.676 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/Simulator.cfg
2020-06-02T15:44:47.759Z,1591112687.759 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/Navigation.cfg
2020-06-02T15:44:47.852Z,1591112687.852 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/logger.cfg
2020-06-02T15:44:47.947Z,1591112687.947 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/secure.cfg
2020-06-02T15:44:48.030Z,1591112688.030 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/Dock.cfg
2020-06-02T15:44:48.114Z,1591112688.114 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/Servo.cfg
2020-06-02T15:44:48.219Z,1591112688.219 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/workSite.cfg
2020-06-02T15:44:48.310Z,1591112688.310 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/Sensor.cfg
2020-06-02T15:44:48.491Z,1591112688.491 [Supervisor](INFO): Opening Config file at: Config/lrauv-whoidhs/Science.cfg
2020-06-02T15:44:48.619Z,1591112688.619 [Supervisor](IMPORTANT): Reading configuration overrides from Data/persisted.cfg
2020-06-02T15:44:48.622Z,1591112688.622 [Module Loader](DEBUG): Loading Module at Modules/Sensor.so
2020-06-02T15:44:48.930Z,1591112688.930 [AHRS_M2](DEBUG): LcmSlateWriter::add(): platform_orientation
2020-06-02T15:44:48.935Z,1591112688.935 [AHRS_M2](INFO): created writer for : platform_orientation
2020-06-02T15:44:48.937Z,1591112688.937 [AHRS_M2](DEBUG): LcmSlateWriter::add(): platform_magnetic_orientation
2020-06-02T15:44:48.942Z,1591112688.942 [AHRS_M2](INFO): created writer for : platform_magnetic_orientation
2020-06-02T15:44:48.943Z,1591112688.943 [AHRS_M2](DEBUG): LcmSlateWriter::add(): platform_pitch_angle
2020-06-02T15:44:48.948Z,1591112688.948 [AHRS_M2](INFO): created writer for : platform_pitch_angle
2020-06-02T15:44:48.948Z,1591112688.948 [AHRS_M2](DEBUG): LcmSlateWriter::add(): platform_roll_angle
2020-06-02T15:44:48.953Z,1591112688.953 [AHRS_M2](INFO): created writer for : platform_roll_angle
2020-06-02T15:44:49.022Z,1591112689.022 [AHRS_M2] Loaded
2020-06-02T15:44:49.023Z,1591112689.023 [ComponentRegistry](DEBUG): SyncComponent "AHRS_M2" handled in the control thread.
2020-06-02T15:44:49.100Z,1591112689.100 [DataOverHttps] Loaded
2020-06-02T15:44:49.100Z,1591112689.100 [ComponentRegistry](DEBUG): Component "DataOverHttps" handled in its own thread.
2020-06-02T15:44:49.101Z,1591112689.101 [DataOverHttps ThreadHandler](DEBUG): Created PCaller Thread at 407734E0
2020-06-02T15:44:49.101Z,1591112689.101 [DataOverHttps ThreadHandler](INFO): Protected caller Thread ID is 9334
2020-06-02T15:44:49.124Z,1591112689.124 [DDM] Loaded
2020-06-02T15:44:49.124Z,1591112689.124 [ComponentRegistry](DEBUG): SyncComponent "DDM" handled in the control thread.
2020-06-02T15:44:49.137Z,1591112689.137 [Depth_Keller] Loaded
2020-06-02T15:44:49.137Z,1591112689.137 [ComponentRegistry](DEBUG): SyncComponent "Depth_Keller" handled in the control thread.
2020-06-02T15:44:49.142Z,1591112689.142 [DropWeight] Loaded
2020-06-02T15:44:49.142Z,1591112689.142 [ComponentRegistry](DEBUG): SyncComponent "DropWeight" handled in the control thread.
2020-06-02T15:44:49.202Z,1591112689.202 [DUSBL_Hydroid] Loaded
2020-06-02T15:44:49.202Z,1591112689.202 [ComponentRegistry](DEBUG): SyncComponent "DUSBL_Hydroid" handled in the control thread.
2020-06-02T15:44:49.247Z,1591112689.247 [Micromodem] Loaded
2020-06-02T15:44:49.247Z,1591112689.247 [ComponentRegistry](DEBUG): SyncComponent "Micromodem" handled in the control thread.
2020-06-02T15:44:49.342Z,1591112689.342 [NAL9602] Loaded
2020-06-02T15:44:49.342Z,1591112689.342 [ComponentRegistry](DEBUG): SyncComponent "NAL9602" handled in the control thread.
2020-06-02T15:44:49.380Z,1591112689.380 [Onboard] Loaded
2020-06-02T15:44:49.380Z,1591112689.380 [ComponentRegistry](DEBUG): SyncComponent "Onboard" handled in the control thread.
2020-06-02T15:44:49.386Z,1591112689.386 [PowerOnly] Loaded
2020-06-02T15:44:49.387Z,1591112689.387 [ComponentRegistry](DEBUG): SyncComponent "PowerOnly" handled in the control thread.
2020-06-02T15:44:49.393Z,1591112689.393 [Radio_Surface] Loaded
2020-06-02T15:44:49.393Z,1591112689.393 [ComponentRegistry](DEBUG): Component "Radio_Surface" handled in its own thread.
2020-06-02T15:44:49.394Z,1591112689.394 [Radio_Surface ThreadHandler](DEBUG): Created PCaller Thread at 407A34E0
2020-06-02T15:44:49.394Z,1591112689.394 [Radio_Surface ThreadHandler](INFO): Protected caller Thread ID is 9335
2020-06-02T15:44:49.436Z,1591112689.436 [RDI_Pathfinder] Loaded
2020-06-02T15:44:49.437Z,1591112689.437 [ComponentRegistry](DEBUG): SyncComponent "RDI_Pathfinder" handled in the control thread.
2020-06-02T15:44:49.473Z,1591112689.473 [RDI_PathfinderUp] Loaded
2020-06-02T15:44:49.473Z,1591112689.473 [ComponentRegistry](DEBUG): SyncComponent "RDI_PathfinderUp" handled in the control thread.
2020-06-02T15:44:51.534Z,1591112691.534 [BPC1] Loaded
2020-06-02T15:44:51.534Z,1591112691.534 [ComponentRegistry](DEBUG): SyncComponent "BPC1" handled in the control thread.
2020-06-02T15:44:51.535Z,1591112691.535 [Module Loader](DEBUG): Loaded Module: Sensor (Contains the sensor components)
2020-06-02T15:44:51.535Z,1591112691.535 [Module Loader](DEBUG): Loading Module at Modules/Sample.so
2020-06-02T15:44:51.554Z,1591112691.554 [Module Loader](DEBUG): Loaded Module: Sample (This is a Sample Module of Sample Components)
2020-06-02T15:44:51.554Z,1591112691.554 [Module Loader](DEBUG): Loading Module at Modules/Navigation.so
2020-06-02T15:44:51.671Z,1591112691.671 [DeadReckonUsingMultipleVelocitySources] Loaded
2020-06-02T15:44:51.672Z,1591112691.672 [ComponentRegistry](DEBUG): SyncComponent "DeadReckonUsingMultipleVelocitySources" handled in the control thread.
2020-06-02T15:44:51.691Z,1591112691.691 [NavChart] Loaded
2020-06-02T15:44:51.691Z,1591112691.691 [ComponentRegistry](DEBUG): SyncComponent "NavChart" handled in the control thread.
2020-06-02T15:44:51.695Z,1591112691.695 [UniversalFixResidualReporter] Loaded
2020-06-02T15:44:51.696Z,1591112691.696 [ComponentRegistry](DEBUG): SyncComponent "UniversalFixResidualReporter" handled in the control thread.
2020-06-02T15:44:51.713Z,1591112691.713 [WorkSite] Loaded
2020-06-02T15:44:51.713Z,1591112691.713 [ComponentRegistry](DEBUG): SyncComponent "WorkSite" handled in the control thread.
2020-06-02T15:44:51.713Z,1591112691.713 [Module Loader](DEBUG): Loaded Module: Navigation (Contains the base navigation components)
2020-06-02T15:44:51.714Z,1591112691.714 [Module Loader](DEBUG): Loading Module at Modules/Dock.so
2020-06-02T15:44:51.789Z,1591112691.789 [Module Loader](DEBUG): Loaded Module: Dock (Contains behaviors and commands for docking)
2020-06-02T15:44:51.790Z,1591112691.790 [Module Loader](DEBUG): Loading Module at Modules/Servo.so
2020-06-02T15:44:51.896Z,1591112691.896 [BuoyancyServo] Loaded
2020-06-02T15:44:51.896Z,1591112691.896 [ComponentRegistry](DEBUG): SyncComponent "BuoyancyServo" handled in the control thread.
2020-06-02T15:44:51.911Z,1591112691.911 [ElevatorServo] Loaded
2020-06-02T15:44:51.911Z,1591112691.911 [ComponentRegistry](DEBUG): SyncComponent "ElevatorServo" handled in the control thread.
2020-06-02T15:44:51.925Z,1591112691.925 [MassServo] Loaded
2020-06-02T15:44:51.926Z,1591112691.926 [ComponentRegistry](DEBUG): SyncComponent "MassServo" handled in the control thread.
2020-06-02T15:44:51.941Z,1591112691.941 [RudderServo] Loaded
2020-06-02T15:44:51.941Z,1591112691.941 [ComponentRegistry](DEBUG): SyncComponent "RudderServo" handled in the control thread.
2020-06-02T15:44:51.955Z,1591112691.955 [ThrusterServo] Loaded
2020-06-02T15:44:51.955Z,1591112691.955 [ComponentRegistry](DEBUG): SyncComponent "ThrusterServo" handled in the control thread.
2020-06-02T15:44:51.956Z,1591112691.956 [Module Loader](DEBUG): Loaded Module: Servo (This is the module containing motor controllers)
2020-06-02T15:44:51.956Z,1591112691.956 [Module Loader](DEBUG): Loading Module at Modules/Science.so
2020-06-02T15:44:52.146Z,1591112692.146 [PAR_Licor] Loaded
2020-06-02T15:44:52.146Z,1591112692.146 [ComponentRegistry](DEBUG): SyncComponent "PAR_Licor" handled in the control thread.
2020-06-02T15:44:52.189Z,1591112692.189 [WetLabsSeaOWL_UV_A] Loaded
2020-06-02T15:44:52.189Z,1591112692.189 [ComponentRegistry](DEBUG): Component "WetLabsSeaOWL_UV_A" handled in its own thread.
2020-06-02T15:44:52.190Z,1591112692.190 [WetLabsSeaOWL_UV_A ThreadHandler](DEBUG): Created PCaller Thread at 409274E0
2020-06-02T15:44:52.191Z,1591112692.191 [WetLabsSeaOWL_UV_A ThreadHandler](INFO): Protected caller Thread ID is 9336
2020-06-02T15:44:52.191Z,1591112692.191 [Module Loader](DEBUG): Loaded Module: Science (Contains the science components)
2020-06-02T15:44:52.192Z,1591112692.192 [Module Loader](DEBUG): Loading Module at Modules/Guidance.so
2020-06-02T15:44:52.475Z,1591112692.475 [Module Loader](DEBUG): Loaded Module: Guidance (Contains behaviors and commands)
2020-06-02T15:44:52.476Z,1591112692.476 [Module Loader](DEBUG): Loading Module at Modules/Derivation.so
2020-06-02T15:44:52.515Z,1591112692.515 [DepthRateCalculator] Loaded
2020-06-02T15:44:52.515Z,1591112692.515 [ComponentRegistry](DEBUG): SyncComponent "DepthRateCalculator" handled in the control thread.
2020-06-02T15:44:52.521Z,1591112692.521 [PitchRateCalculator] Loaded
2020-06-02T15:44:52.521Z,1591112692.521 [ComponentRegistry](DEBUG): SyncComponent "PitchRateCalculator" handled in the control thread.
2020-06-02T15:44:52.533Z,1591112692.533 [SpeedCalculator] Loaded
2020-06-02T15:44:52.533Z,1591112692.533 [ComponentRegistry](DEBUG): SyncComponent "SpeedCalculator" handled in the control thread.
2020-06-02T15:44:52.554Z,1591112692.554 [TempGradientCalculator] Loaded
2020-06-02T15:44:52.554Z,1591112692.554 [ComponentRegistry](DEBUG): SyncComponent "TempGradientCalculator" handled in the control thread.
2020-06-02T15:44:52.559Z,1591112692.559 [YawRateCalculator] Loaded
2020-06-02T15:44:52.560Z,1591112692.560 [ComponentRegistry](DEBUG): SyncComponent "YawRateCalculator" handled in the control thread.
2020-06-02T15:44:52.598Z,1591112692.598 [ElevatorOffsetCalculator] Loaded
2020-06-02T15:44:52.599Z,1591112692.599 [ComponentRegistry](DEBUG): SyncComponent "ElevatorOffsetCalculator" handled in the control thread.
2020-06-02T15:44:52.599Z,1591112692.599 [Module Loader](DEBUG): Loaded Module: Derivation (Contains the base derivation components)
2020-06-02T15:44:52.600Z,1591112692.600 [Module Loader](DEBUG): Loading Module at Modules/BIT.so
2020-06-02T15:44:52.731Z,1591112692.731 [SBIT](DEBUG): Construct Startup Built In Test.
2020-06-02T15:44:52.749Z,1591112692.749 [SBIT] Loaded
2020-06-02T15:44:52.749Z,1591112692.749 [ComponentRegistry](DEBUG): SyncComponent "SBIT" handled in the control thread.
2020-06-02T15:44:52.750Z,1591112692.750 [IBIT](DEBUG): Construct Initiated Built In Test.
2020-06-02T15:44:52.762Z,1591112692.762 [IBIT] Loaded
2020-06-02T15:44:52.763Z,1591112692.763 [ComponentRegistry](DEBUG): SyncComponent "IBIT" handled in the control thread.
2020-06-02T15:44:52.766Z,1591112692.766 [CBIT](DEBUG): Construct Continuous Built In Test.
2020-06-02T15:44:52.901Z,1591112692.901 [CBIT] Loaded
2020-06-02T15:44:52.901Z,1591112692.901 [ComponentRegistry](DEBUG): SyncComponent "CBIT" handled in the control thread.
2020-06-02T15:44:52.902Z,1591112692.902 [Module Loader](DEBUG): Loaded Module: BIT (Contains the BuiltInTest components, such as C Built In Test)
2020-06-02T15:44:52.902Z,1591112692.902 [Module Loader](DEBUG): Loading Module at Modules/Estimation.so
2020-06-02T15:44:52.983Z,1591112692.983 [Module Loader](DEBUG): Loaded Module: Estimation (Contains the base estimation components)
2020-06-02T15:44:52.984Z,1591112692.984 [Module Loader](DEBUG): Loading Module at Modules/Simulator.so
2020-06-02T15:44:53.080Z,1591112693.080 [Module Loader](DEBUG): Loaded Module: Simulator (This is the module containing the Simulator)
2020-06-02T15:44:53.080Z,1591112693.080 [Module Loader](DEBUG): Loading Module at Modules/Control.so
2020-06-02T15:44:53.128Z,1591112693.128 [VerticalControl](DEBUG): Construct VerticalControl.
2020-06-02T15:44:53.209Z,1591112693.209 [VerticalControl] Loaded
2020-06-02T15:44:53.209Z,1591112693.209 [ComponentRegistry](DEBUG): SyncComponent "VerticalControl" handled in the control thread.
2020-06-02T15:44:53.210Z,1591112693.210 [HorizontalControl](DEBUG): Construct HorizontalControl.
2020-06-02T15:44:53.278Z,1591112693.278 [HorizontalControl] Loaded
2020-06-02T15:44:53.278Z,1591112693.278 [ComponentRegistry](DEBUG): SyncComponent "HorizontalControl" handled in the control thread.
2020-06-02T15:44:53.279Z,1591112693.279 [SpeedControl](DEBUG): Construct SpeedControl.
2020-06-02T15:44:53.280Z,1591112693.280 [SpeedControl] Loaded
2020-06-02T15:44:53.281Z,1591112693.281 [ComponentRegistry](DEBUG): SyncComponent "SpeedControl" handled in the control thread.
2020-06-02T15:44:53.281Z,1591112693.281 [LoopControl](DEBUG): Construct LoopControl.
2020-06-02T15:44:53.282Z,1591112693.282 [LoopControl] Loaded
2020-06-02T15:44:53.282Z,1591112693.282 [ComponentRegistry](DEBUG): SyncComponent "LoopControl" handled in the control thread.
2020-06-02T15:44:53.283Z,1591112693.283 [Module Loader](DEBUG): Loaded Module: Control (Contains the Control components, such as Depth, Heading, and Speed Control)
2020-06-02T15:44:53.283Z,1591112693.283 [Module Loader](DEBUG): Loading Module at Modules/Trigger.so
2020-06-02T15:44:53.309Z,1591112693.309 [Module Loader](DEBUG): Loaded Module: Trigger (Contains triggers for use in missions)
2020-06-02T15:44:53.313Z,1591112693.313 [ComponentRegistry](DEBUG): SyncComponent "MissionManager" handled in the control thread.
2020-06-02T15:44:53.314Z,1591112693.314 [ComponentRegistry](DEBUG): SyncComponent "Reporter" handled in the control thread.
2020-06-02T15:44:53.321Z,1591112693.321 [ComponentRegistry](DEBUG): Component "NavChartDb" handled in its own thread.
2020-06-02T15:44:53.322Z,1591112693.322 [NavChartDb ThreadHandler](DEBUG): Created PCaller Thread at 40AFA4E0
2020-06-02T15:44:53.322Z,1591112693.322 [NavChartDb ThreadHandler](INFO): Protected caller Thread ID is 9337
2020-06-02T15:44:53.327Z,1591112693.327 [Supervisor](INFO): Main Thread ID is 9112
2020-06-02T15:44:53.327Z,1591112693.327 [Supervisor](DEBUG): Running supervisor.
2020-06-02T15:44:53.327Z,1591112693.327 [CommandLine ThreadHandler](INFO): Handler Thread ID is 9338
2020-06-02T15:44:53.330Z,1591112693.330 [controlThread ThreadHandler](INFO): Handler Thread ID is 9339
2020-06-02T15:44:53.330Z,1591112693.330 [controlThread](DEBUG): Initializing ControlThread
2020-06-02T15:44:53.338Z,1591112693.338 [NavChart](DEBUG): Initialize NavChart Navigation.
2020-06-02T15:44:53.338Z,1591112693.338 [UniversalFixResidualReporter](DEBUG): Initializing UniversalFixResidualReporter component.
2020-06-02T15:44:53.338Z,1591112693.338 [WorkSite](DEBUG): Initializing WorkSite component.
2020-06-02T15:44:53.343Z,1591112693.343 [DepthRateCalculator](DEBUG): Initializing DepthRateCalculator.
2020-06-02T15:44:53.343Z,1591112693.343 [PitchRateCalculator](DEBUG): Initializing PitchRateCalculator.
2020-06-02T15:44:53.343Z,1591112693.343 [SpeedCalculator](DEBUG): Initializing SpeedCalculator.
2020-06-02T15:44:53.344Z,1591112693.344 [TempGradientCalculator](DEBUG): Initializing TempGradientCalculator.
2020-06-02T15:44:53.344Z,1591112693.344 [YawRateCalculator](DEBUG): Initializing YawRateCalculator.
2020-06-02T15:44:53.345Z,1591112693.345 [ElevatorOffsetCalculator](DEBUG): Initializing ElevatorOffsetCalculator.
2020-06-02T15:44:53.345Z,1591112693.345 [SBIT](INFO): Initialize SBIT Component.
2020-06-02T15:44:53.346Z,1591112693.346 [SBIT](IMPORTANT): git: 2020-06-01
2020-06-02T15:44:53.346Z,1591112693.346 [SBIT](INFO): git hash: e027a2dac774308c41d8b30ec58d773e2978dc9a
2020-06-02T15:44:53.346Z,1591112693.346 [SBIT](IMPORTANT): Kernel Release: 2.6.27.8
2020-06-02T15:44:53.349Z,1591112693.349 [SBIT](INFO): Kernel Reporting Different Version From Configuration.
Kernel Expected: #2 PREEMPT Thu Jan 11 20:13:48 PST 2018
Kernel Reported: #1 PREEMPT Wed Nov 13 12:38:10 PST 2019
2020-06-02T15:44:53.350Z,1591112693.350 [SBIT](INFO): Beginning SBIT in 31.000000 seconds.
2020-06-02T15:44:53.351Z,1591112693.351 [logger ThreadHandler](INFO): Handler Thread ID is 9340
2020-06-02T15:44:53.366Z,1591112693.366 [IBIT](INFO): Initialize IBIT Component.
2020-06-02T15:44:53.367Z,1591112693.367 [CBIT](DEBUG): Initialize CBIT Component.
2020-06-02T15:44:53.375Z,1591112693.375 [DataOverHttps ThreadHandler](INFO): Handler Thread ID is 9341
2020-06-02T15:44:53.376Z,1591112693.376 [DataOverHttps](DEBUG): dashIP=128.128.181.155 starts with a digit so assuming it is a numeric IP
2020-06-02T15:44:53.378Z,1591112693.378 [CBIT](DEBUG): Initialized mux pins.
2020-06-02T15:44:53.378Z,1591112693.378 [CBIT](DEBUG): Initializing the watchdog timer.
2020-06-02T15:44:53.387Z,1591112693.387 [Radio_Surface ThreadHandler](INFO): Handler Thread ID is 9342
2020-06-02T15:44:53.399Z,1591112693.399 [WetLabsSeaOWL_UV_A ThreadHandler](INFO): Handler Thread ID is 9343
2020-06-02T15:44:53.399Z,1591112693.399 [WetLabsSeaOWL_UV_A](INFO): Powering down
2020-06-02T15:44:53.407Z,1591112693.407 [CBIT](INFO): Last reboot was NOT due to watchdog timer.
2020-06-02T15:44:53.407Z,1591112693.407 [CBIT](DEBUG): Initializing heartbeat.
2020-06-02T15:44:53.431Z,1591112693.431 [NavChartDb ThreadHandler](INFO): Handler Thread ID is 9344
2020-06-02T15:44:53.434Z,1591112693.434 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US1WC07M.000
2020-06-02T15:44:53.434Z,1591112693.434 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US1WC07M.000
2020-06-02T15:44:53.434Z,1591112693.434 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US2WC11M.000
2020-06-02T15:44:53.434Z,1591112693.434 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US2WC11M.000
2020-06-02T15:44:53.435Z,1591112693.435 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US3CA52M.000
2020-06-02T15:44:53.435Z,1591112693.435 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US3CA52M.000
2020-06-02T15:44:53.435Z,1591112693.435 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US4CA60M.000
2020-06-02T15:44:53.435Z,1591112693.435 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US4CA60M.000
2020-06-02T15:44:53.435Z,1591112693.435 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA50M.000
2020-06-02T15:44:53.435Z,1591112693.435 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA50M.000
2020-06-02T15:44:53.436Z,1591112693.436 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA61M.000
2020-06-02T15:44:53.436Z,1591112693.436 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA61M.000
2020-06-02T15:44:53.436Z,1591112693.436 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA62M.000
2020-06-02T15:44:53.436Z,1591112693.436 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA62M.000
2020-06-02T15:44:53.436Z,1591112693.436 [NavChartDb](INFO): Looking for Electronic Nav Chart file at: Resources/ElectronicNavigationCharts/US5CA83M.000
2020-06-02T15:44:53.436Z,1591112693.436 [NavChartDb](INFO): Already Loaded Electronic Nav Chart data from US5CA83M.000
2020-06-02T15:44:53.478Z,1591112693.478 [CBIT](DEBUG): Deactivating GF circuits.
2020-06-02T15:44:53.478Z,1591112693.478 [CBIT](DEBUG): Deactivating emergency mode.
2020-06-02T15:44:53.514Z,1591112693.514 [CBIT](DEBUG): Backplane powered.
2020-06-02T15:44:53.515Z,1591112693.515 [VerticalControl](DEBUG): Initialize VerticalControlComponent.
2020-06-02T15:44:53.516Z,1591112693.516 [HorizontalControl](DEBUG): Initialize HorizontalControlComponent.
2020-06-02T15:44:53.517Z,1591112693.517 [SpeedControl](DEBUG): Initialize SpeedControlComponent.
2020-06-02T15:44:53.517Z,1591112693.517 [LoopControl](DEBUG): Initialize LoopControlComponent.
2020-06-02T15:44:53.518Z,1591112693.518 [MissionManager](INFO): Loading Mission: Missions/Startup.xml
2020-06-02T15:44:53.529Z,1591112693.529 [Startup:A.GoToSurface](DEBUG): Construct GoToSurface.
2020-06-02T15:44:53.548Z,1591112693.548 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns="Tethys"
       xmlns:Control="Tethys/Control"
       xmlns:Guidance="Tethys/Guidance" 
       xmlns:Units="Tethys/Units"
       xmlns:Universal="Tethys/Universal"
       xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
       xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                           Tethys/Control http://okeanids.mbari.org/tethys/Xml/Control.xsd
                           Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                           Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                           Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
       Id="Startup">

    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="StartupSatComms">

        <Sequence/>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:latitude_fix/>
        </ReadDatum>

        <ReadDatum>
            <Timeout Duration="P1M" />
            <Universal:platform_communications/>
        </ReadDatum>

    </Aggregate>

</Mission>


2020-06-02T15:44:53.548Z,1591112693.548 [MissionManager](INFO): Loading Mission: Missions/underIce/DefaultWithUndock.xml
2020-06-02T15:44:53.647Z,1591112693.647 [MissionManager](INFO): DefineArg DefaultWithUndock.ElapsedSinceDefaultStarted = 0.000000 min
2020-06-02T15:44:53.663Z,1591112693.663 [MissionManager](INFO): DefineArg DefaultWithUndock.DetachTimeout = 30.000000 min
2020-06-02T15:44:53.674Z,1591112693.674 [MissionManager](INFO): DefineArg DefaultWithUndock.MicromodemCommsInterval = 2.000000 min
2020-06-02T15:44:53.676Z,1591112693.676 [DefaultWithUndock:A.Wait](DEBUG): Construct Wait.
2020-06-02T15:44:53.677Z,1591112693.677 [DefaultWithUndock:B.Undock](DEBUG): Construct.
2020-06-02T15:44:53.678Z,1591112693.678 [DefaultWithUndock:B.Undock](DEBUG): Initializing internal variables to default values.
2020-06-02T15:44:53.718Z,1591112693.718 [DefaultWithUndock:C.GoToSurface](DEBUG): Construct GoToSurface.
2020-06-02T15:44:53.733Z,1591112693.733 [DefaultWithUndock:CheckIn:Read_Iridium:A_Timeout:A.Execute](DEBUG): Construct Execute.
2020-06-02T15:44:53.752Z,1591112693.752 [DefaultWithUndock:CheckIn:C.Wait](DEBUG): Construct Wait.
2020-06-02T15:44:53.757Z,1591112693.757 [DefaultWithUndock:F.Execute](DEBUG): Construct Execute.
2020-06-02T15:44:53.777Z,1591112693.777 [MissionManager](DEBUG): 
<?xml version="1.0" encoding="UTF-8"?>
<Mission xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xmlns="Tethys"
         xmlns:Units="Tethys/Units"
         xmlns:Guidance="Tethys/Guidance"
         xmlns:Universal="Tethys/Universal"
         xsi:schemaLocation="Tethys http://okeanids.mbari.org/tethys/Xml/Tethys.xsd
                             Tethys/Units http://okeanids.mbari.org/tethys/Xml/Units.xsd
                             Tethys/Guidance http://okeanids.mbari.org/tethys/Xml/Guidance.xsd
                             Tethys/Universal http://okeanids.mbari.org/tethys/Xml/Universal.xsd"
         Id="DefaultWithUndock">

    <DefineArg Name="ElapsedSinceDefaultStarted"><Units:minute/><Value>0</Value></DefineArg>

    <DefineArg Name="DetachTimeout"><Description>
        Maximum time duration for the vehicle to reach the approach depth after detaching form the dock.
        The vehicle will switch over to midcourse guidance after the timeout is expired.
    </Description><Units:minute/><Value>30</Value></DefineArg>

    <DefineArg Name="MicromodemCommsInterval"><Description>
        How often to trigger Umodem communications
    </Description><Units:minute/><Value>2</Value></DefineArg>
        
    <Guidance:Wait>
        <Description>
            Wait a moment to see if the scheduler starts a new mission before
            starting to actually run Default.
        </Description>
        <Sequence/>
        <Setting><Guidance:Wait.duration/><Units:second/><Value>30</Value></Setting>
    </Guidance:Wait>

    <!-- Leave the dock if necessary --> 
    <Guidance:Undock>
        <Sequence/>
        <Timeout Duration="DetachTimeout">
            <Syslog Severity="Important">Timed out while trying to detach from dock at current depth of <Universal:depth/><Units:meter/>.</Syslog>
        </Timeout>
    </Guidance:Undock>

    <!-- This mission assumes open water so from here on it's the same old default that's always used -->
    <Guidance:GoToSurface>
        <Progression/>
    </Guidance:GoToSurface>

    <Aggregate Id="CheckIn">

        <Sequence Repeat="288"/>

        <ReadDatum Id="Read_GPS">
            <Timeout Duration="P5M"/>
            <Universal:time_fix/>
        </ReadDatum>

        <ReadDatum Id="Read_Iridium">
            <Timeout Duration="P2H">
                <Guidance:Execute>
                    <Sequence/>
                    <Setting><Guidance:Execute.command/><String>Burn on</String></Setting>
                </Guidance:Execute>
                <Syslog Severity="Critical">Dropped weight due to communications timeout.</Syslog>
            </Timeout>
            <Universal:platform_communications/>
        </ReadDatum>

        <Guidance:Wait>
            <Sequence/>
            <Setting><Guidance:Wait.duration/><Units:minute/><Value>5</Value></Setting>
        </Guidance:Wait>

        <Assign><Sequence/><Arg Name="ElapsedSinceDefaultStarted"/><Elapsed><Universal:mission_started/></Elapsed></Assign>

        <Syslog Severity="Important">Default mission has been running for <Arg Name="ElapsedSinceDefaultStarted"/><Units:minute/></Syslog>

    </Aggregate>

    <Syslog Severity="Important">Restarting logs and Default mission.</Syslog>

    <Guidance:Execute>
        <Sequence/>
        <Setting><Guidance:Execute.command/><String>restart logs</String></Setting>
    </Guidance:Execute>

</Mission>


2020-06-02T15:44:53.783Z,1591112693.783 [controlThread](DEBUG): Component order: CycleStarter,AHRS_M2,DDM,Depth_Keller,DropWeight,DUSBL_Hydroid,Micromodem,NAL9602,Onboard,PowerOnly,RDI_Pathfinder,RDI_PathfinderUp,BPC1,PAR_Licor,Depth_Keller,PAR_Licor,DepthRateCalculator,PitchRateCalculator,SpeedCalculator,TempGradientCalculator,YawRateCalculator,ElevatorOffsetCalculator,DeadReckonUsingMultipleVelocitySources,NavChart,UniversalFixResidualReporter,WorkSite,MissionManager,VerticalControl,HorizontalControl,SpeedControl,LoopControl,BuoyancyServo,ElevatorServo,MassServo,RudderServo,ThrusterServo,SBIT,IBIT,CBIT,Reporter,LogSplitter,
2020-06-02T15:44:53.790Z,1591112693.790 [Radio_Surface](INFO): Powering up
2020-06-02T15:44:53.794Z,1591112693.794 [AHRS_M2](DEBUG): Initializing AHRS_M2.
2020-06-02T15:44:53.832Z,1591112693.832 [DDM](INFO): Powering up
2020-06-02T15:44:53.833Z,1591112693.833 [DDM](DEBUG): Initializing DDM.
2020-06-02T15:44:53.861Z,1591112693.861 [DUSBL_Hydroid](INFO): Powering up
2020-06-02T15:44:53.861Z,1591112693.861 [DUSBL_Hydroid](DEBUG): Initializing DUSBL_Hydroid.
2020-06-02T15:44:54.108Z,1591112694.108 [BuoyancyServo](DEBUG): Initializing EZServoServo.
2020-06-02T15:44:54.114Z,1591112694.114 [BuoyancyServo](DEBUG): Initializing BuoyancyServo.
2020-06-02T15:44:54.116Z,1591112694.116 [ElevatorServo](DEBUG): Initializing EZServoServo.
2020-06-02T15:44:54.122Z,1591112694.122 [ElevatorServo](DEBUG): Initializing ElevatorServo.
2020-06-02T15:44:54.123Z,1591112694.123 [MassServo](DEBUG): Initializing EZServoServo.
2020-06-02T15:44:54.130Z,1591112694.130 [MassServo](DEBUG): Initializing MassServo.
2020-06-02T15:44:54.131Z,1591112694.131 [RudderServo](DEBUG): Initializing EZServoServo.
2020-06-02T15:44:54.138Z,1591112694.138 [RudderServo](DEBUG): Initializing RudderServo.
2020-06-02T15:44:54.139Z,1591112694.139 [ThrusterServo](DEBUG): Initializing EZServoServo.
2020-06-02T15:44:54.146Z,1591112694.146 [ThrusterServo](DEBUG): Initializing ThrusterServo.
2020-06-02T15:44:54.211Z,1591112694.211 [Depth_Keller](ERROR): Pressure reading out of range: 1913.424561 decibar
2020-06-02T15:44:54.213Z,1591112694.213 [Micromodem](INFO): Powering up
2020-06-02T15:44:54.214Z,1591112694.214 [Micromodem](DEBUG): Initializing Micromodem.
2020-06-02T15:44:54.990Z,1591112694.990 [RudderServo](ERROR): Rudder initialization uart error serial timeout
2020-06-02T15:44:54.990Z,1591112694.990 [RudderServo](FAULT): Rudder failed to initialize
2020-06-02T15:44:54.990Z,1591112694.990 [RudderServo] Communications Fault, FailCount= 1
2020-06-02T15:44:54.991Z,1591112694.991 [RudderServo](ERROR): Communications Fault
2020-06-02T15:44:55.101Z,1591112695.101 [CBIT](ERROR): Communications Fault in component: RudderServo
2020-06-02T15:44:55.283Z,1591112695.283 [RudderServo](DEBUG): Uninitialize Rudder Servo.
2020-06-02T15:44:55.283Z,1591112695.283 [RudderServo](INFO): Powering down
2020-06-02T15:44:55.951Z,1591112695.951 [RudderServo](DEBUG): Initializing EZServoServo.
2020-06-02T15:44:56.071Z,1591112696.071 [RudderServo](DEBUG): Initializing RudderServo.
2020-06-02T15:44:56.075Z,1591112696.075 [CBIT](INFO): Clearing failed state for component RudderServo
2020-06-02T15:44:56.075Z,1591112696.075 [RudderServo] No Fault, FailCount= 1
2020-06-02T15:44:59.202Z,1591112699.202 [Micromodem](INFO): Nmea out: $CCCFG,ALL,0*33

2020-06-02T15:44:59.597Z,1591112699.597 [Micromodem](INFO): Nmea in: $CATMG,2020-06-02T15:44:59.525853Z,RTC,RTC*50

2020-06-02T15:44:59.597Z,1591112699.597 [Micromodem](ERROR): CFG response from modem unexpected: $CATMG,2020-06-02T15:44:59.525853Z,RTC,RTC*50

2020-06-02T15:44:59.997Z,1591112699.997 [Micromodem](INFO): Nmea in: $CACFG,ALL,0*31

2020-06-02T15:44:59.997Z,1591112699.997 [Micromodem](INFO): Nmea out: $CCCFG,SRC,1*31

2020-06-02T15:45:00.400Z,1591112700.400 [Micromodem](INFO): Nmea in: $CACFG,SRC,1*33

2020-06-02T15:45:00.401Z,1591112700.401 [Micromodem](INFO): Nmea out: $CCCFG,nav.dt.txtrig_gpio4,1*64

2020-06-02T15:45:00.809Z,1591112700.809 [Micromodem](INFO): Nmea in: $CACFG,nav.dt.txtrig_gpio4,1*66

2020-06-02T15:45:00.809Z,1591112700.809 [Micromodem](INFO): Nmea out: $CCCFG,pwramp.txlevel,0*2F

2020-06-02T15:45:01.213Z,1591112701.213 [Micromodem](INFO): Nmea in: $CACFG,pwramp.txlevel,0*2D

2020-06-02T15:45:01.213Z,1591112701.213 [Micromodem](INFO): Nmea out: $CCCFG,DTO,30*1E

2020-06-02T15:45:01.616Z,1591112701.616 [Micromodem](INFO): Nmea in: $CACFG,DTO,30*1C

2020-06-02T15:45:01.617Z,1591112701.617 [Micromodem](INFO): Nmea out: $CCCFG,FC0,14500*47

2020-06-02T15:45:02.017Z,1591112702.017 [Micromodem](INFO): Nmea in: $CACFG,FC0,14500*45

2020-06-02T15:45:02.017Z,1591112702.017 [Micromodem](INFO): Nmea out: $CCCFG,BW0,4000*63

2020-06-02T15:45:02.425Z,1591112702.425 [Micromodem](INFO): Nmea in: $CACFG,BW0,4000*61

2020-06-02T15:45:02.425Z,1591112702.425 [Micromodem](INFO): Nmea out: $CCCFG,BND,0*3A

2020-06-02T15:45:02.800Z,1591112702.800 [Micromodem](INFO): Nmea in: $CACFG,BND,0*38

2020-06-02T15:45:02.801Z,1591112702.801 [Micromodem](INFO): Nmea out: $CCCLK,2020,06,02,15,45,03*46

2020-06-02T15:45:03.217Z,1591112703.217 [Micromodem](INFO): Nmea in: $CACLK,2020,6,2,15,45,3*74

2020-06-02T15:45:03.620Z,1591112703.620 [Micromodem](INFO): Nmea in: $CATMS,0,2020-06-02T15:45:04Z*73

2020-06-02T15:45:04.009Z,1591112704.009 [Micromodem](INFO): Nmea in: $CATMG,2020-06-02T15:45:04.027997Z,USER_CMD,RTC*16

2020-06-02T15:45:09.251Z,1591112709.251 [DDM](INFO): Dynamic Docking Module:!C REMUS Capture Rev 1.1
2020-06-02T15:45:11.680Z,1591112711.680 [DUSBL_Hydroid](INFO): DUSBL Version:O
2020-06-02T15:45:14.192Z,1591112714.192 [RDI_PathfinderUp](ERROR): only read 0 of 1 data item for altitude
2020-06-02T15:45:19.369Z,1591112719.369 [NAL9602](INFO): Powering up NAL9602
2020-06-02T15:45:25.080Z,1591112725.080 [SBIT](IMPORTANT): Beginning Startup BIT
2020-06-02T15:45:25.088Z,1591112725.088 [CBIT](IMPORTANT): Beginning ground fault scan
2020-06-02T15:45:30.469Z,1591112730.469 [NAL9602](INFO): NAL9602 initialized
2020-06-02T15:45:35.732Z,1591112735.732 [RDI_Pathfinder](ERROR): only read 3 of 4 data items
2020-06-02T15:45:36.215Z,1591112736.215 [CBIT](IMPORTANT): No ground fault detected
mA:
CHAN A0 (Batt): 0.006170
CHAN A1 (24V): -0.028964
CHAN A2 (12V): -0.007167
CHAN A3 (5V): -0.002443
CHAN B0 (3.3V): 0.000158
CHAN B1 (3.15aV): 0.000066
CHAN B2 (3.15bV): 0.000428
CHAN B3 (GND): 0.002103
OPEN: 0.005230
Full Scale Calc: 4.765 mA, -1.589 mA
2020-06-02T15:46:05.757Z,1591112765.757 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2020-06-02T15:46:07.384Z,1591112767.384 [RDI_PathfinderUp](ERROR): only read 0 of 1 data item for BIT error
2020-06-02T15:46:12.062Z,1591112772.062 [RDI_Pathfinder](ERROR): only read 3 of 4 data items
2020-06-02T15:46:18.898Z,1591112778.898 [SBIT](IMPORTANT): SBIT PASSED
2020-06-02T15:46:18.898Z,1591112778.898 [SBIT](IMPORTANT): Listing configuration overrides from Data/persisted.cfg
2020-06-02T15:46:18.915Z,1591112778.915 [SBIT](IMPORTANT): DDM.verbosity=1 count;

2020-06-02T15:46:19.307Z,1591112779.307 [WorkSite](IMPORTANT): Reading workSite position from Data/workSite.cfg
2020-06-02T15:46:19.310Z,1591112779.310 [WorkSite](IMPORTANT): WorkSite fix at 20200602T154357: (41.572839, -70.737508)
2020-06-02T15:46:19.312Z,1591112779.312 [MissionManager](IMPORTANT): Started mission Startup
2020-06-02T15:46:19.312Z,1591112779.312 [Startup] Running Loop=1
2020-06-02T15:46:19.312Z,1591112779.312 [Startup](DEBUG): Aggregate::initialize Startup
2020-06-02T15:46:19.312Z,1591112779.312 [Startup:A.GoToSurface] Running Loop=1
2020-06-02T15:46:19.312Z,1591112779.312 [Startup:A.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2020-06-02T15:46:19.313Z,1591112779.313 [Startup:A.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2020-06-02T15:46:19.313Z,1591112779.313 [Startup:A.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2020-06-02T15:46:19.313Z,1591112779.313 [Startup:A.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2020-06-02T15:46:19.314Z,1591112779.314 [Startup:A.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2020-06-02T15:46:19.326Z,1591112779.326 [Startup:A.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2020-06-02T15:46:19.328Z,1591112779.328 [Startup:StartupSatComms] Running Loop=1
2020-06-02T15:46:19.328Z,1591112779.328 [Startup:StartupSatComms](DEBUG): Aggregate::initialize Startup:StartupSatComms
2020-06-02T15:46:19.328Z,1591112779.328 [Startup:StartupSatComms:A] Running Loop=1
2020-06-02T15:46:19.760Z,1591112779.760 [Startup:StartupSatComms:A](DEBUG): Initialize ReadDataComponent to sense latitude_fix
2020-06-02T15:46:50.391Z,1591112810.391 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2020-06-02T15:47:05.403Z,1591112825.403 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for altitude
2020-06-02T15:47:09.373Z,1591112829.373 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for BIT error
2020-06-02T15:47:11.041Z,1591112831.041 [RDI_Pathfinder](ERROR): only read 0 of 4 data items
2020-06-02T15:47:19.483Z,1591112839.483 [Startup:StartupSatComms:A](INFO): Timed out from 2020-06-02T15:46:19.3Z
2020-06-02T15:47:19.483Z,1591112839.483 [Startup:StartupSatComms:A] Stopped
2020-06-02T15:47:19.483Z,1591112839.483 [Startup:StartupSatComms:B] Running Loop=1
2020-06-02T15:47:19.892Z,1591112839.892 [Startup:StartupSatComms:B](DEBUG): Initialize ReadDataComponent to sense platform_communications
2020-06-02T15:47:29.985Z,1591112849.985 [NAL9602](INFO): SBD MO Status=2, MOMSN=11248, MT Status=2, MTMSN=0
2020-06-02T15:47:29.985Z,1591112849.985 [NAL9602](ERROR): Failed to initiate SBD session. Error code: 2
2020-06-02T15:47:45.833Z,1591112865.833 [BPC1](ERROR): BPC1B failed to parse battery data due to unrecognized msg size.
2020-06-02T15:47:49.383Z,1591112869.383 [RDI_Pathfinder](ERROR): only read 0 of 4 data items
2020-06-02T15:48:12.064Z,1591112892.064 [RDI_Pathfinder](ERROR): only read 0 of 1 data item for altitude
2020-06-02T15:48:13.218Z,1591112893.218 [DataOverHttps](INFO): setting available, lastComms_.elapsed()=0.005168
2020-06-02T15:48:17.230Z,1591112897.230 [DataOverHttps](INFO): Sending 39 bytes from file Logs/20200602T153915/Courier0004.lzma
2020-06-02T15:48:18.232Z,1591112898.232 [DataOverHttps](INFO): Moved sent file to Logs/20200602T153915/Courier0004.lzma.bak
2020-06-02T15:48:18.232Z,1591112898.232 [DataOverHttps](INFO): SBD MOMSN=20300
2020-06-02T15:48:19.682Z,1591112899.682 [Startup:StartupSatComms:B](INFO): Timed out from 2020-06-02T15:47:19.5Z
2020-06-02T15:48:19.682Z,1591112899.682 [Startup:StartupSatComms:B] Stopped
2020-06-02T15:48:19.682Z,1591112899.682 [Startup:StartupSatComms](INFO): Completed Startup:StartupSatComms
2020-06-02T15:48:19.682Z,1591112899.682 [Startup:StartupSatComms] Stopped
2020-06-02T15:48:19.682Z,1591112899.682 [Startup:StartupSatComms](DEBUG): Aggregate::uninitialize Startup:StartupSatComms
2020-06-02T15:48:19.683Z,1591112899.683 [Startup](INFO): Completed Startup
2020-06-02T15:48:19.683Z,1591112899.683 [MissionManager](INFO): Startup is completed.
2020-06-02T15:48:19.683Z,1591112899.683 [MissionManager](INFO): Uninitializing Mission Startup
2020-06-02T15:48:19.683Z,1591112899.683 [Startup] Stopped
2020-06-02T15:48:19.684Z,1591112899.684 [Startup](DEBUG): Aggregate::uninitialize Startup
2020-06-02T15:48:19.684Z,1591112899.684 [Startup:A.GoToSurface] Stopped
2020-06-02T15:48:19.684Z,1591112899.684 [Startup:A.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2020-06-02T15:48:20.113Z,1591112900.113 [MissionManager](IMPORTANT): Started mission DefaultWithUndock
2020-06-02T15:48:20.113Z,1591112900.113 [DefaultWithUndock] Running Loop=1
2020-06-02T15:48:20.113Z,1591112900.113 [DefaultWithUndock](DEBUG): Aggregate::initialize DefaultWithUndock
2020-06-02T15:48:20.113Z,1591112900.113 [DefaultWithUndock:C.GoToSurface] Running Loop=1
2020-06-02T15:48:20.113Z,1591112900.113 [DefaultWithUndock:C.GoToSurface](DEBUG): Initialize GoToSurfaceComponent.
2020-06-02T15:48:20.114Z,1591112900.114 [DefaultWithUndock:C.GoToSurface](DEBUG): No depth rate setting specified. Using default value of nan m/s.
2020-06-02T15:48:20.114Z,1591112900.114 [DefaultWithUndock:C.GoToSurface](DEBUG): No pitch setting specified. Using default value of nan degrees.
2020-06-02T15:48:20.114Z,1591112900.114 [DefaultWithUndock:C.GoToSurface](DEBUG): No speed setting specified. Using default value of 1.000000 m/s.
2020-06-02T15:48:20.115Z,1591112900.115 [DefaultWithUndock:C.GoToSurface](DEBUG): No surface timeout specified. Using default value of 1000.000000 seconds.
2020-06-02T15:48:20.115Z,1591112900.115 [DefaultWithUndock:C.GoToSurface](INFO): Received pitch timeout configuration 60.000000 seconds.
2020-06-02T15:48:20.115Z,1591112900.115 [DefaultWithUndock:A.Wait] Running Loop=1
2020-06-02T15:48:20.115Z,1591112900.115 [DefaultWithUndock:A.Wait](DEBUG): Initialize Wait Component.
2020-06-02T15:48:24.564Z,1591112904.564 [RDI_PathfinderUp](ERROR): only read 0 of 1 data item for BIT error
2020-06-02T15:48:25.755Z,1591112905.755 [RDI_Pathfinder](ERROR): only read 3 of 4 data items
2020-06-02T15:48:50.393Z,1591112930.393 [DefaultWithUndock:A.Wait](INFO): Done Waiting.
2020-06-02T15:48:50.393Z,1591112930.393 [DefaultWithUndock:A.Wait] Stopped
2020-06-02T15:48:50.393Z,1591112930.393 [DefaultWithUndock:A.Wait](DEBUG): Uninitialize Wait Component.
2020-06-02T15:48:50.393Z,1591112930.393 [DefaultWithUndock:B.Undock] Running Loop=1
2020-06-02T15:48:50.393Z,1591112930.393 [DefaultWithUndock:B.Undock](DEBUG): Initialize.
2020-06-02T15:48:50.393Z,1591112930.393 [DefaultWithUndock:B.Undock](DEBUG): Initializing internal variables to default values.
2020-06-02T15:48:51.178Z,1591112931.178 [PowerOnly](INFO): Powering up.
2020-06-02T15:48:51.304Z,1591112931.304 [BPC1](ERROR): BPC1A failed to parse battery data due to unrecognized msg size.
2020-06-02T15:48:51.000Z,1591112932.000 [DDM](INFO): Detaching. Opening Latch
2020-06-02T15:48:52.373Z,1591112932.373 [DDM](INFO): Detaching. Opening Latch
2020-06-02T15:48:52.776Z,1591112932.776 [DDM](INFO): Detaching. Opening Latch
2020-06-02T15:48:53.181Z,1591112933.181 [DDM](INFO): Detaching. Opening Latch
2020-06-02T15:48:54.532Z,1591112934.532 [DefaultWithUndock:B.Undock](INFO): Detaching from dock.
2020-06-02T15:48:54.900Z,1591112934.900 [DefaultWithUndock:B.Undock](INFO): Detected possible detachment. Starting timer.
2020-06-02T15:48:57.390Z,1591112937.390 [DataOverHttps](INFO): Sending 270 bytes from file Logs/20200602T154442/Courier0000.lzma
2020-06-02T15:48:58.392Z,1591112938.392 [DataOverHttps](INFO): Moved sent file to Logs/20200602T154442/Courier0000.lzma.bak
2020-06-02T15:48:58.392Z,1591112938.392 [DataOverHttps](INFO): SBD MOMSN=20302
2020-06-02T15:49:15.065Z,1591112955.065 [DefaultWithUndock:B.Undock](INFO): Detached at range: nan m. Transitioning DDM to standby.
2020-06-02T15:49:15.804Z,1591112955.804 [DDM](INFO): Closing Latch
2020-06-02T15:49:16.208Z,1591112956.208 [DDM](INFO): Closing Latch
2020-06-02T15:49:16.613Z,1591112956.613 [DDM](INFO): Closing Latch
2020-06-02T15:49:17.040Z,1591112957.040 [DDM](INFO): Closing Latch
2020-06-02T15:49:18.367Z,1591112958.367 [DefaultWithUndock:B.Undock](INFO): DDM at standby.
2020-06-02T15:49:18.726Z,1591112958.726 [DefaultWithUndock:B.Undock](IMPORTANT): Undocking sequence complete.
2020-06-02T15:49:18.726Z,1591112958.726 [DefaultWithUndock:B.Undock] Stopped
2020-06-02T15:49:19.127Z,1591112959.127 [DefaultWithUndock:CheckIn] Running Loop=1
2020-06-02T15:49:19.128Z,1591112959.128 [DefaultWithUndock:CheckIn](DEBUG): Aggregate::initialize DefaultWithUndock:CheckIn
2020-06-02T15:49:19.128Z,1591112959.128 [DefaultWithUndock:CheckIn:Read_GPS] Running Loop=1
2020-06-02T15:49:19.523Z,1591112959.523 [DefaultWithUndock:CheckIn:Read_GPS](DEBUG): Initialize ReadDataComponent to sense time_fix
2020-06-02T15:50:22.507Z,1591113022.507 [PowerOnly](INFO): Powering down
2020-06-02T15:50:33.784Z,1591113033.784 [NAL9602](FAULT): MT Queue status failed to be acquired within timeout. Will not retry this session.
2020-06-02T15:51:08.317Z,1591113068.317 [CommandLine](IMPORTANT): got command restart application
2020-06-02T15:51:09.326Z,1591113069.326 [Supervisor](INFO): Stop Mission called by Supervisor::terminate
2020-06-02T15:51:09.327Z,1591113069.327 [CommandLine ThreadHandler](INFO): Uninitializing protected caller thread.
2020-06-02T15:51:09.327Z,1591113069.327 [CommandLine ThreadHandler](INFO): Thread cancelled.
2020-06-02T15:51:09.398Z,1591113069.398 [Supervisor](DEBUG): Uninitializing supervisor and starting cleanup.  Bye!
2020-06-02T15:51:09.398Z,1591113069.398 [CommandLine ThreadHandler](INFO): Thread cancelled.
2020-06-02T15:51:09.399Z,1591113069.399 [CommandLine](INFO): Join timeout helper Thread ID is 9394
2020-06-02T15:51:09.410Z,1591113069.410 [ComponentRegistry](INFO): Shutting down NavChartDb ThreadHandler
2020-06-02T15:51:09.410Z,1591113069.410 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2020-06-02T15:51:09.411Z,1591113069.411 [NavChartDb](INFO): Join timeout helper Thread ID is 9395
2020-06-02T15:51:09.510Z,1591113069.510 [NavChartDb ThreadHandler](INFO): Uninitializing protected caller thread.
2020-06-02T15:51:09.511Z,1591113069.511 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2020-06-02T15:51:09.526Z,1591113069.526 [ComponentRegistry](INFO): Shutting down WetLabsSeaOWL_UV_A ThreadHandler
2020-06-02T15:51:09.526Z,1591113069.526 [WetLabsSeaOWL_UV_A ThreadHandler](INFO): Thread cancelled.
2020-06-02T15:51:09.527Z,1591113069.527 [WetLabsSeaOWL_UV_A](INFO): Join timeout helper Thread ID is 9396
2020-06-02T15:51:09.578Z,1591113069.578 [WetLabsSeaOWL_UV_A ThreadHandler](INFO): Uninitializing protected caller thread.
2020-06-02T15:51:09.579Z,1591113069.579 [WetLabsSeaOWL_UV_A](INFO): Powering down
2020-06-02T15:51:09.579Z,1591113069.579 [WetLabsSeaOWL_UV_A ThreadHandler](INFO): Thread cancelled.
2020-06-02T15:51:09.586Z,1591113069.586 [ComponentRegistry](INFO): Shutting down Radio_Surface ThreadHandler
2020-06-02T15:51:09.586Z,1591113069.586 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2020-06-02T15:51:09.587Z,1591113069.587 [Radio_Surface](INFO): Join timeout helper Thread ID is 9397
2020-06-02T15:51:09.926Z,1591113069.926 [Radio_Surface](INFO): Powering down
2020-06-02T15:51:09.927Z,1591113069.927 [Radio_Surface ThreadHandler](INFO): Uninitializing protected caller thread.
2020-06-02T15:51:09.927Z,1591113069.927 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2020-06-02T15:51:09.935Z,1591113069.935 [ComponentRegistry](INFO): Shutting down DataOverHttps ThreadHandler
2020-06-02T15:51:09.935Z,1591113069.935 [DataOverHttps ThreadHandler](INFO): Thread cancelled.
2020-06-02T15:51:09.936Z,1591113069.936 [DataOverHttps](INFO): Join timeout helper Thread ID is 9398
2020-06-02T15:51:09.947Z,1591113069.947 [DataOverHttps ThreadHandler](INFO): Uninitializing protected caller thread.
2020-06-02T15:51:09.948Z,1591113069.948 [DataOverHttps ThreadHandler](INFO): Thread cancelled.
2020-06-02T15:51:09.957Z,1591113069.957 [ComponentRegistry](INFO): Shutting down logger ThreadHandler
2020-06-02T15:51:09.957Z,1591113069.957 [logger ThreadHandler](INFO): Thread cancelled.
2020-06-02T15:51:09.959Z,1591113069.959 [logger](INFO): Join timeout helper Thread ID is 9399
2020-06-02T15:51:09.967Z,1591113069.967 [logger ThreadHandler](INFO): Uninitializing protected caller thread.
2020-06-02T15:51:09.968Z,1591113069.968 [logger ThreadHandler](INFO): Thread cancelled.
2020-06-02T15:51:09.979Z,1591113069.979 [ComponentRegistry](INFO): Shutting down CommandLine ThreadHandler
2020-06-02T15:51:09.979Z,1591113069.979 [CommandLine ThreadHandler](INFO): Thread cancelled.
2020-06-02T15:51:09.979Z,1591113069.979 [ComponentRegistry](INFO): Shutting down controlThread ThreadHandler
2020-06-02T15:51:09.979Z,1591113069.979 [controlThread ThreadHandler](INFO): Thread cancelled.
2020-06-02T15:51:09.980Z,1591113069.980 [controlThread](INFO): Join timeout helper Thread ID is 9400
2020-06-02T15:51:10.122Z,1591113070.122 [controlThread ThreadHandler](INFO): Uninitializing protected caller thread.
2020-06-02T15:51:10.123Z,1591113070.123 [controlThread](DEBUG): Uninitializing ControlThread
2020-06-02T15:51:10.123Z,1591113070.123 [AHRS_M2](INFO): Powering down
2020-06-02T15:51:10.195Z,1591113070.195 [DDM](INFO): Powering down
2020-06-02T15:51:10.287Z,1591113070.287 [DUSBL_Hydroid](INFO): Powering down
2020-06-02T15:51:10.379Z,1591113070.379 [Micromodem](INFO): Powering down
2020-06-02T15:51:10.475Z,1591113070.475 [NAL9602](INFO): Powering down
2020-06-02T15:51:10.546Z,1591113070.546 [RDI_Pathfinder](INFO): Powering down
2020-06-02T15:51:10.618Z,1591113070.618 [RDI_PathfinderUp](INFO): Powering down
2020-06-02T15:51:10.620Z,1591113070.620 [DepthRateCalculator](DEBUG): Uninitializing DepthRateCalculator.
2020-06-02T15:51:10.621Z,1591113070.621 [ElevatorOffsetCalculator](DEBUG): Uninitializing ElevatorOffsetCalculator.
2020-06-02T15:51:10.622Z,1591113070.622 [NavChart](DEBUG): Uninitialize NavChart Navigation.
2020-06-02T15:51:10.623Z,1591113070.623 [MissionManager](INFO): Uninitializing Mission DefaultWithUndock
2020-06-02T15:51:10.623Z,1591113070.623 [DefaultWithUndock] Stopped
2020-06-02T15:51:10.623Z,1591113070.623 [DefaultWithUndock](DEBUG): Aggregate::uninitialize DefaultWithUndock
2020-06-02T15:51:10.623Z,1591113070.623 [DefaultWithUndock:C.GoToSurface] Stopped
2020-06-02T15:51:10.623Z,1591113070.623 [DefaultWithUndock:C.GoToSurface](DEBUG): Uninitialize GoToSurfaceComponent.
2020-06-02T15:51:10.623Z,1591113070.623 [DefaultWithUndock:CheckIn] Stopped
2020-06-02T15:51:10.623Z,1591113070.623 [DefaultWithUndock:CheckIn](DEBUG): Aggregate::uninitialize DefaultWithUndock:CheckIn
2020-06-02T15:51:10.623Z,1591113070.623 [DefaultWithUndock:CheckIn:Read_GPS] Stopped
2020-06-02T15:51:10.627Z,1591113070.627 [VerticalControl](DEBUG): Uninitialize VerticalControlComponent.
2020-06-02T15:51:10.627Z,1591113070.627 [HorizontalControl](DEBUG): Uninitialize HorizontalControlComponent.
2020-06-02T15:51:10.627Z,1591113070.627 [SpeedControl](DEBUG): Uninitialize SpeedControlComponent.
2020-06-02T15:51:10.627Z,1591113070.627 [LoopControl](DEBUG): Uninitialize LoopControlComponent.
2020-06-02T15:51:10.628Z,1591113070.628 [BuoyancyServo](DEBUG): Uninitialize Buoyancy Servo.
2020-06-02T15:51:10.628Z,1591113070.628 [BuoyancyServo](INFO): Powering down
2020-06-02T15:51:10.642Z,1591113070.642 [ElevatorServo](DEBUG): Uninitialize Elevator Servo.
2020-06-02T15:51:10.642Z,1591113070.642 [ElevatorServo](INFO): Powering down
2020-06-02T15:51:10.643Z,1591113070.643 [MassServo](DEBUG): Uninitialize Mass Servo.
2020-06-02T15:51:10.643Z,1591113070.643 [MassServo](INFO): Powering down
2020-06-02T15:51:10.644Z,1591113070.644 [RudderServo](DEBUG): Uninitialize Rudder Servo.
2020-06-02T15:51:10.644Z,1591113070.644 [RudderServo](INFO): Powering down
2020-06-02T15:51:10.645Z,1591113070.645 [ThrusterServo](DEBUG): Uninitialize Thruster Servo.
2020-06-02T15:51:10.645Z,1591113070.645 [ThrusterServo](INFO): Powering down
2020-06-02T15:51:10.646Z,1591113070.646 [SBIT](DEBUG): Uninitialize SBIT Component.
2020-06-02T15:51:10.646Z,1591113070.646 [IBIT](DEBUG): Uninitialize IBIT Component.
2020-06-02T15:51:10.647Z,1591113070.647 [CBIT](DEBUG): Uninitialize CBIT Component.
2020-06-02T15:51:10.647Z,1591113070.647 [CBIT](DEBUG): Powering off loads.
2020-06-02T15:51:10.658Z,1591113070.658 [CBIT](DEBUG): Disabling WDT.
2020-06-02T15:51:10.670Z,1591113070.670 [CBIT](DEBUG): Opening all GF detection circuits.
2020-06-02T15:51:10.671Z,1591113070.671 [controlThread ThreadHandler](INFO): Thread cancelled.
2020-06-02T15:51:10.722Z,1591113070.722 [Radio_Surface ThreadHandler](INFO): Thread cancelled.
2020-06-02T15:51:10.733Z,1591113070.733 [DataOverHttps ThreadHandler](INFO): Thread cancelled.
2020-06-02T15:51:10.783Z,1591113070.783 [WetLabsSeaOWL_UV_A ThreadHandler](INFO): Thread cancelled.
2020-06-02T15:51:10.845Z,1591113070.845 [NavChartDb ThreadHandler](INFO): Thread cancelled.
2020-06-02T15:51:10.913Z,1591113070.913 [logger ThreadHandler](INFO): Thread cancelled.